BRESEQ :: Evidence

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,087,280	1	.	G	63.1%	656.3 / inf	290	intergenic (‑166/+49)	yoeI/yeeY	uncharacterized protein/LysR family putative transcriptional regulator
Reads supporting (aligned to +/- strand): ref base . (51/56); new base G (102/81); total (153/137)
Fisher's exact test for biased strand distribution p-value = 2.23e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.01e-01
Rejected as consensus: Frequency below/above cutoff threshold.

Only 100 of 336 total aligned reads displayed.

TGTCGATTTTTAGTAAATATCTATCCGGTACGAAGCCCGGCCTCTTGGTATGAATGATTGGTTTGAAGCAAAAAATAACCGACGCTGATGAAACGTCGGTTTTTAGTCATTTTTTGACAGCGGCGCATTGTGCCTAAAT‑GGGGGGGA‑AATGACAAGAGAATGAGAGGCTTGTCAGAATAATTTTTCTTTAAATGGCTGATTTTCCGTCATCAGATTTTGCATAAACACCGGCGATCGCACTATTTGCTAAAATTTCATCCCGCCACCAGCCACTGGC  >  NC_000913/2087142‑2087418

    gATTTTTAGTAAATATCTATCCGGTACGAAGCCCGGCCTCTTGGTATGAATGATTGGTTTGAAGCAAAAAATAACCGACGCTGATGAAACGTCGGTTTTTAGTCATTTTTTGACAGCGGCGCATTGTGCCTAAAT‑gggg                                                                                                                                         <  2:691870/139‑1 (MQ=255)

     aTTTTTAGTAAATATCTATCCGGTACGAAGCCCGGCCTCTTGGTATGAATGATTGGTTTGAAGCAAAAAATAACCGACGCTGATGAAACGTCGGTTTTTAGTCATTTTTTGACAGCGGCGCATTGTGCCTAAAT‑ggggg                                                                                                                                        <  1:1615859/139‑1 (MQ=255)

       ttttAGTAAATATCTATCCGGTACGAAGCCCGGCCTCTTGGTATGAATGATTGGTTTGAAGCAAAAAATAACCGACGCTGATGAAACGTCGGTTTTTAGTCATTTTTTGACAGCGGCGCATTGTGCCTAAAT‑ggggggg                                                                                                                                      <  2:885173/139‑1 (MQ=255)

       ttttAGTAAATATCTATCCGGTACGAAGCCCGGCCTCTTGGTATGAATGATTGGTTTGAAGCAAAAAATAACCGACGCTGATGAAACGTCGGTTTTTAGTCATTTTTTGACAGCGGCGCATTGTGCCTAAAT‑ggggggg                                                                                                                                      <  2:553474/139‑1 (MQ=255)

            gTAAATATCTATCCGGTACGAAGCCCGGCCTCTTGGTATGAATGATTGGTTTGAAGCAAAAAATAACCGACGCTGATGAAACGTCGGTTTTTAGTCATTTTTTGACAGCGGCGCATTGTGCCTAAAT‑GGGGGGGa                                                                                                                                     >  2:1270913/1‑135 (MQ=255)

               aaTATCTATCCGGTACGAAGCCCGGCCTCTTGGTATGAATGATTGGTTTGAAGCAAAAAATAACCGACGCTGATGAAACGTCGGTTTTTAGTCATTTTTTGACAGCGGCGCATTGTGCCTAAATGGGGGGGGA‑AATGAc                                                                                                                              <  2:59423/139‑1 (MQ=255)

               aaTATCTATCCGGTACGAAGCCCGGCCTCTTGGTATGAATGATTGGTTTGAAGCAAAAAATAACCGACGCTGATGAAACGTCGGTTTTTAGTCATTTTTTGACAGCGGCGCATTGTGCCTAAATGGGGGGGGA‑AATGAc                                                                                                                              <  2:1310699/139‑1 (MQ=255)

               aaTATCTATCCGGTACGAAGCCCGGCCTCTTGGTATGAATGATTGGTTTGAAGCAAAAAATAACCGACGCTGATGAAACGTCGGTTTTTAGTCATTTTTTGACAGCGGCGCATTGTGCCTAAAT‑GGGGGGGA‑AATGACa                                                                                                                             >  1:357710/1‑139 (MQ=255)

                atatCTATCCGGTACGAAGCCCGGCCTCTTGGTATGAATGATTGGTTTTAAGCAAAAAATAACCGACGCTGATGAAACGTCGGTTTTTAGTCATTTTTTGACAGCGGCGCATTGTGCCTAAATGGGGGGGGA‑AATGACa                                                                                                                             >  1:1134921/1‑139 (MQ=255)

                   tctatcCGGTACGAAGCCCGGCCTCTTGGTATGAATGATTGGTTTGAAGCAAAAAATAACCGACGCTGATGAAACGTCGGTTTTTAGTCATTTTTTGACAGCGGCGCATTGTGCCTAAAT‑GGGGGGGA‑AATGACAagag                                                                                                                         <  2:209447/139‑1 (MQ=255)

                       tcCGGTACGAAGCCCGGCCTCTTGGTATGAATGATTGGTTTGAAGCAAAAAATAACCGACGCTGATGAAACGTCGGTTTTTAGTCATTTTTTGACAGCGGCGCATTGTGCCTAAAt                                                                                                                                              >  2:394762/1‑116 (MQ=255)

                       tcCGGTACGAAGCCCGGCCTCTTGGTATGAATGATTGGTTTGAAGCAAAAAATAACCGACGCTGATGAAACGTCGGTTTTTAGTCATTTTTTGACAGCGGCGCATTGTGCCTAAAT‑GGGGGGGA‑AATGACAAGAGAATg                                                                                                                     >  1:534287/1‑139 (MQ=255)

                       tcCGGTACGAAGCCCGGCCTCTTGGTATGAATGATTGGTTTGAAGCAAAAAATAACCGACGCTGATGAAACGTCGGTTTTTAGTCATTTTTTGACAGCGGCGCATTGTGCCTAAAT‑GGGGGGGA‑AATGACAAGAGAATg                                                                                                                     >  2:427273/1‑139 (MQ=255)

                        ccGGTACGAAGCCCGGCCTCTTGGTATGAATGATTGGTTTGAAGCAAAAAATAACCGACGCTGATGAAACGTCGGTTTTTAGTCATTTTTTGACAGCGGCGCATTGTGCCTAAATGGGGGGGGA‑AATGACAAGAGAATg                                                                                                                     <  1:1276669/139‑1 (MQ=255)

                           gTACGAAGCCCGGCCTCTTGGTATGAATGATTGGTTTGAAGCAAAAAATAACCGACGCTGATGAAACGTCGGTTTTTAGTCATTTTTTGACAGCGGCGCATTGTGCCTAAATGGGGGGGGA‑AATGACAag                                                                                                                           <  1:1467002/130‑1 (MQ=255)

                           gTACGAAGCCCGGCCTCTTGGTATGAATGATTGGTTTGAAGCAAAAAATAACCGACGCTGATGAAACGTCGGTTTTTAGTCATTTTTTGACAGCGGCGCATTGTGCCTAAATGGGGGGGGA‑AATGACAag                                                                                                                           <  1:256181/130‑1 (MQ=255)

                            tACGAAGCCCGGCCTCTTGGTATGAATGATTGGTTTGAAGCAAAAAATAACCGACGCTGATGAAACGTCGGTTTTTAGTCATTTTTTGACAGCGGCGCATTGTGCCTAAATGGGGGGGGG‑AATGACAAGAGAATGagag                                                                                                                 >  2:78511/1‑139 (MQ=255)

                            tACGAAGCCCGGCCTCTTGGTATGAATGATTGGTTTGAAGCAAAAAATAACCGACGCTGATGAAACGTCGGTTTTTAGTCATTTTTTGACAGCGGCGCATTGTGCCTAAATGGGGGGGGA‑AATGAc                                                                                                                              >  1:386815/1‑126 (MQ=255)

                            tACGAAGCCCGGCCTCTTGGTATGAATGATTGGTTTGAAGCAAAAAATAACCGACGCTGATGAAACGTCGGTTTTTAGTCATTTTTTGACAGCGGCGCATTGTGCCTAAATGGGGGGGGA‑AATGACaa                                                                                                                            >  1:1013765/1‑128 (MQ=255)

                            tACGAAGCCCGGCCTCTTGGTATGAATGATTGGTTTGAAGCAAAAAATAACCGACGCTGATGAAACGTCGGTTTTTAGTCATTTTTTGACAGCGGCGCATTGTGCCTAAATGGGGGGGGA‑AATGACAAGAGAATGagag                                                                                                                 >  1:1601840/1‑139 (MQ=255)

                            tACGAAGCCCGGCCTCTTGGTATGAATGATTGGTTTGAAGCAAAAAATAACCGACGCTGATGAAACGTCGGTTTTTAGTCATTTTTTGACAGCGGCGCATTGTGCCTAAATGGGGGGGGA‑AATGACAAGAGAATGagag                                                                                                                 >  2:19325/1‑139 (MQ=255)

                            tACGAAGCCCGGCCTCTTGGTATGAATGATTGGTTTGAAGCAAAAAATAACCGACGCTGATGAAACGTCGGTTTTTAGTCATTTTTTGACAGCGGCGCATTGTGCCTAAATGGGGGGGGA‑AATGACAAGAGAATGagag                                                                                                                 >  2:1410351/1‑139 (MQ=255)

                            tACGAAGCCCGGCCTCTTGGTATGAATGATTGGTTTGAAGCAAAAAATAACCGACGCTGATGAAACGTCGGTTTTTAGTCATTTTTTGACAGCGGCGCATTGTGCCTAAAT‑GGGGGGGA‑AATGACAAGAGAATGAGAgg                                                                                                                >  1:583000/1‑139 (MQ=255)

                            tACGAAGCCCGGCCTCTTGGTATGAATGATTGGTTTGAAGCAAAAAATAACCGACGCTGATGAAACGTCGGTTTTTAGTCATTTTTTGACAGCGGCGCATTGTGCCTAAAT‑GGGGGGGA‑AATGACAAGAGAATGAGAgg                                                                                                                >  2:959331/1‑139 (MQ=255)

                                 aGCCCGGCCTCTTGGTATGAATGATTGGTTTGAAGCAAAAAATAACCGACGCTGATGAAACGTCGGTTTTTAGTCATTTTTTGACAGCGGCGCATTGTGCCTAAATGGGGGGGGG‑AATGACAAGAGAATGAGAgg                                                                                                                <  1:1488494/135‑1 (MQ=255)

                                 aGCCCGGCCTCTTGGTATGAATGATTGGTTTGAAGCAAAAAATAACCGACGCTGATGAAACGTCGGTTTTTAGTCATTTTTTGACAGCGGCGCATTGTGCCTAAATGGGGGGGGA‑AATGACAAGAGAATGAAAGGcacg                                                                                                            >  1:92931/1‑136 (MQ=255)

                                 aGCCCGGCCTCTTGGTATGAATGATTGGTTTGAAGCAAAAAATAACCGACGCTGATGAAACGTCGGTTTTTAGTCATTTTTTGACAGCGGCGCATTGTGCCTAAAT‑GGGGGGGA‑AATGACAAGAGAATGAGAGGCTTGt                                                                                                           >  1:848986/1‑139 (MQ=255)

                                 aGCCCGGCCTCTTGGTATGAATGATTGGTTTGAAGCAAAAAATAACCGACGCTGATGAAACGTCGGTTTTTAGTCATTTTTTGACAGCGGCGCATTGTGCCTAAAT‑GGGGGGGA‑AATGACAAGAGAATGAGAGGCTTGt                                                                                                           <  2:1147337/139‑1 (MQ=255)

                                  gCCCGGCCTCTTGGTATGAATGATTGGTTTGAAGCAAAAAATAACCGACGCTGATGAAACGTCGGTTTTTAGTCATTTTTTGACAGCGGCGCATTGTGCCTAAATGGGGGGGGA‑AATGACAAGAGAATGAGAGGCTTGt                                                                                                           <  1:1410351/139‑1 (MQ=255)

                                     cGGCCTCTTGGTATGAATGATTGGTTTGAAGCAAAAAATAACCGACGCTGATGAAACGTCGGTTTTTAGTCATTTTTTGACAGCGGCGCATTGTGCCTAAATGGGGGGGGG‑CATGACAAGAGAATGAGAGGCTTGTCAg                                                                                                        >  2:10953/1‑139 (MQ=255)

                                     cGGCCTCTTGGTATGAATGATTGGTTTGAAGCAAAAAATAACCGACGCTGATGAAACGTCGGTTTTTAGTCATTTTTTGACAGCGGCGCATTGTGCCTAAATGGGGGGGGA‑AATGACAAGAGAATGAGAGGCTTGTCAg                                                                                                        <  2:580378/139‑1 (MQ=255)

                                      ggCCTCTTGGTATGAATGATTGGTTTGAAGCAAAAAATAACCGACGCTGATGAAACGTCGGTTTTTAGTCATTTTTTGACAGCGGCGCATTGTGCCTAAATGGGGGGGGA‑AATGACAAGAGAATGAGAgg                                                                                                                <  1:746850/130‑1 (MQ=255)

                                      ggCCTCTTGGTATGAATGATTGGTTTGAAGCAAAAAATAACCGACGCTGATGAAACGTCGGTTTTTAGTCATTTTTTGACAGCGGCGCATTGTGCCTAAATGGGGGGGGA‑AATGACAAGAGAATGAGAGGCTTGTCAGa                                                                                                       >  1:367022/1‑139 (MQ=255)

                                      ggCCTCTTGGTATGAATGATTGGTTTGAAGCAAAAAATAACCGACGCTGATGAAACGTCGGTTTTTAGTCATTTTTTGACAGCGGCGCATTGTGCCTAAATGGGGGGGGA‑AATGACAAGAGAATGAGAGGCTTGTCAGa                                                                                                       >  1:122097/1‑139 (MQ=255)

                                      ggCCTCTTGGTATGAATGATTGGTTTGAAGCAAAAAATAACCGACGCTGATGAAACGTCGGTTTTTAGTCATTTTTTGACAGCGGCGCATTGTGCCTAAAT‑GGGGGGGa                                                                                                                                     <  2:1475309/109‑1 (MQ=255)

                                           ctTGGTATGAATGATTGGTTTGAAGCAAAAAATAACCGACGCTGATGAAACGTCGGTTTTTAGTCATTTTTTGACAGCGGCGCATTGTGCCTAAAT‑GGGGGGGA‑AATGACAAGAGAATGAGAGGCTTGTCAGAATAAtt                                                                                                 <  1:720669/139‑1 (MQ=255)

                                             tGGTATGAATGATTGGTTTGAAGCAAAAAATAACCGACGCTGATGAAACGTCGGTTTTTAGTCATTTTTTGACAGCGGCGCATTGTGCCTAAATGGGGGGGGA‑AATGACAAGAGAATGAGAGGCTTGTCAGAATAAttt                                                                                                >  2:476326/1‑139 (MQ=255)

                                                  tgaatgaTTGGTTTGAAGCAAAAAATAACCGACGCTGATGAAACGTCGGTTTTTAGTCATTTTTTGACAGCGGCGCATTGTGCCTAAAT‑ggg                                                                                                                                          >  1:1088422/1‑92 (MQ=255)

                                                   gaatgaTTGGTTTGAAGCAAAAAATAACCGACGCTGATGAAACGTCGGTTTTTAGTCATTTTTTGACAGCGGCGCATTGTGCCTAAATGGGGGGGGA‑AATGACAAGAGAATGAGAGGCTTGt                                                                                                           <  1:495531/122‑1 (MQ=255)

                                                    aatgaTTGGTTTGAAGCAAAAAATAACCGACGCTGATGAAACGTCGGTTTTTAGTCATTTTTTGACAGCGGCGCATTGTGCCTAAATGGGGGGGGA‑AATGACAAGAGAATGAGAGGCTTGTCAGAATAATTTTTCTTTa                                                                                         >  2:1191639/1‑139 (MQ=255)

                                                    aatgaTTGGTTTGAAGCAAAAAATAACCGACGCTGATGAAACGTCGGTTTTTAGTCATTTTTTGACAGCGGCGCATTGTGCCTAAATGGGGGGGGA‑AATGACAAGAGAATGAGAGGCTTGTCAGAATAATTTTTCTTTa                                                                                         >  1:658866/1‑139 (MQ=255)

                                                    aatgaTTGGTTTGAAGCAAAAAATAACCGACGCTGATGAAACGTCGGTTTTTAGTCATTTTTTGACAGCGGCGCATTGTGCCTAAAT‑GGGGGGGA‑AATGACAAGAGAATGAGAGGCTTGTCAGAATAATTTTTCTTTaa                                                                                        >  1:898552/1‑139 (MQ=255)

                                                    aatgaTTGGTTTGAAGCAAAAAATAACCGACGCTGATGAAACGTCGGTTTTTAGTCATTTTTTGACAACGGCGCATTGTGCCTAAAT‑GGGGGGGA‑AATGACAAGAGAATGAGAGGCTTGTCAGAATAATTTTTCTTTa                                                                                         >  2:105376/1‑138 (MQ=255)

                                                    aatgaTTGGTTTGAAGCAAAAAATAACCGACGCTGATGAAACGTCGGTTTTTAGTCATTTTTTGACAACGGCGCATTGTGCCTAAAT‑GGGGGGGA‑AATGACAAGAGAATGAGAGGCTTGTCAGAATAATTTTTCTTTa                                                                                         <  1:105376/138‑1 (MQ=255)

                                                      tgaTTGGTTTGAAGCAAAAAATAACCGACGCTGATGAAACGTCGGTTTTTAGTCATTTTTTGACAGCGGCGCATTGTGCCTAAAT‑GGGGGGGA‑AATGACAAGAGAATGAGAGGCTTGTCAGAATAATTTTTCTTTAAAt                                                                                      >  1:314238/1‑139 (MQ=255)

                                                         ttGTTTTGAAGCAAAAAATAACCGACGCTGATGAAACGTCGGTTTTTAGTCATTTTTTGACAGCGGCGCATTGTGCCTAAAT‑GGGGGGGA‑AATGAc                                                                                                                              <  1:519566/96‑1 (MQ=255)

                                                          tGGTTTGAAGCAAAAAATAACCGCCGCAGATGAAACGTCGGTATTTAGTCATTTTTTGACAGCGGCGCATTGTGCACAACT‑GAGGGGGA‑AATGACAAGAGAATGAGAGGCTGGTCAGAATAGTTTTTCTTTAAATGACt                                                                                  >  1:572122/1‑139 (MQ=255)

                                                          tGGTTTGAAGCAAAAAATAACCGACGCTGATGAAACGTCGGTTTTTAGTCATTTTTTGACAGCGGCGCATTGTGCCTAAATGGGGGGGGA‑AATGACAAGAGAATGAGAGGCTTGTCAGAATAATTTTTCTTTaa                                                                                        <  1:990139/134‑1 (MQ=255)

                                                          tGGTTTGAAGCAAAAAATAACCGACGCTGATGAAACGTCGGTTTTTAGTCATTTTTTGACAGCGGCGCATTGTGCCTAAATGGGGGGGGA‑AATGACAAGAGAATGAGAGGCTTGTCAGAATAATTTTTCTTTAAATGGc                                                                                   >  1:337510/1‑139 (MQ=255)

                                                          tGGTTTGAAGCAAAAAATAACCGACGCTGATGAAACGTCGGTTTTTAGTCATTTTTTGACAGCGGCGCATTGTGCCTAAATGGGGGGGGA‑AATGACAAGAGAATGAGAGGCTTGTCAGAATAATTTTTCTTTAAATGGc                                                                                   <  2:254984/139‑1 (MQ=255)

                                                              ttGAAGCAAAAAATAACCGACGCTGATGAAACGTCGGTTTTTAGTCATTTTTTGACAGCGGCGCATTGTGCCTAAATGGGGGGGGA‑AATGACAAGAGAATGAGAGGCTTGTCAGAATAATTTTTCTTTAAATGGCTGAt                                                                               >  2:869912/1‑139 (MQ=255)

                                                              ttGAAGCAAAAAATAACCGACGCTGATGAAACGTCGGTTTTTAGTCATTTTTTGACAGCGGCGCATTGTGCCTAAAT‑ggggggggg                                                                                                                                    >  2:487436/1‑84 (MQ=255)

                                                                  aGCAAAAAATAACCGACGCTGATGAAACGTCGGTTTTTAGTCATTTTTTGACAGCGGCGCATTGTGCCTAAATGGGGGGGGA‑AATGACAAGAGAATGAGAGGCTTGTCAGAATAATTTTTCTTTAAATGGCTGATTTTc                                                                           <  2:658866/139‑1 (MQ=255)

                                                                        aaaTAACCGACGCTGATGAAACGTCGGTTTTTAGTCATTTTTTGACAGCGGCGCATTGTGCCTAAATGGGGGGGGA‑AATGACAAGAGAATGAGAGGCTTGTCAGAATAATTTTTCTTTAAATGGCTGATTTTCCGtcat                                                                     <  2:1043748/139‑1 (MQ=255)

                                                                         aaTAACCGACGCTGATGAAACGTCGGTTTTTAGTCATTTTTTGACAGCGGCGCATTGTGCCTAAATGGGGGGGGA‑AATGACAAGAGAATGAGAGGCTTGTCAGAATAATTTTTCTTTAAATGGCTGATTTTCCGtcatc                                                                    <  2:1368865/139‑1 (MQ=255)

                                                                             aCCGACGCTGATGAAATGTCGGTTTTTAGTCATTTTTTGACAGCGGCGCATTGTGCCTAAAT‑GGGGGGGAGAATGACAAGAGAATGAGAGGCTTGTCAGAATAATTTTTCTTTAAATGGCTGATTTTCCGTCATCTGAt                                                                <  2:1120737/139‑1 (MQ=255)

                                                                             aCCGACGCTGATGAAACGTCGGTTTTTAGTCATTTTTTGACAGCGGCGCATTGTGCCTAAAT‑GGGGGGGA‑AATGACAAGAGAATGAGAGGCTTGTCAGAATAATTTTTCTTTAAATGGCTGATTTTCCGTCATCAGAtt                                                               <  2:848986/139‑1 (MQ=255)

                                                                               cGACGCTGATGAAACGTCGGTTTTTAGTCATTTTTTGACAGCGGCGCATTGTGCCTAAATGGGGGGGGA‑AATGACAAGAGAATGAGAGGCTTGTCAGAATAATTTTTCTTTAAATGGCTGATTTTCCGTCATCAGAttt                                                              <  1:1570519/139‑1 (MQ=255)

                                                                                 aCGCTGATGAAACGTCGGTTTTTAGTCATTTTTTGACAGCGGCGCATTGTGCCTAAATGGGGGGGGA‑AATGACAAGAGAATGAGAGGCTTGTCAGAATAATTTTTCTTTAAATGGCTGATTTTCCGTCATCAGAtt                                                               >  2:518974/1‑136 (MQ=255)

                                                                                 aCGCTGATGAAACGTCGGTTTTTAGTCATTTTTTGACAGCGGCGCATTGTGCCTAAATGGGGGGGGA‑AATGACAAGAGAATGAGAGGCTTGTCAGAATAATTTTTCTTTAAATGGCTGATTTTCCGTCATCAGATTTTg                                                            >  1:1343148/1‑139 (MQ=255)

                                                                                 aCGCTGATGAAACGTCGGTTTTTAGTCATTTTTTGACAGCGGCGCATTGTGCCTAAAT‑gggg                                                                                                                                         <  2:1610407/62‑1 (MQ=255)

                                                                                 aCGCTGATGAAACGTCGGTTTTTAGTCATTTTTTGACAGCGGCGCATTGTGCCTAAAT‑GGGGGGGA‑AATGACAAGAGAATGAGAGGCTTGTCAGAATAATTTTTCTTTAAATGGCTGATTTTCCGTCATCAGATTTTGc                                                           >  2:1529472/1‑139 (MQ=255)

                                                                                  cGCTGATGAAACGTCGGTTTTTAGTCATTTTTTGACAGCGGCGCATTGTGCCTAAATGGGGGGGGA‑AATGACAaga                                                                                                                          <  1:209228/76‑1 (MQ=255)

                                                                                  cGCTGATGAAACGTCGGTTTTTAGTCATTTTTTGACAGCGGCGCATTGTGCCTAAATGGGGGGGGA‑AATGACAAGAGAATGAGAGGCTTGTCAGAATAATTTTTCTTTAAATGGCTGATTTTCCGTCATCAGATTTTGc                                                           <  2:728645/139‑1 (MQ=255)

                                                                                   gctaatgaAACGTCGGTTTTTAGTCATTTTTTGACAGCGGCGCATTGTGCCTAAATGGGGGGGGA‑AATGAc                                                                                                                              >  2:91713/5‑71 (MQ=255)

                                                                                   gCTGATGAAACGTCGGTTTTTAGTCATTTTTTGACAGCGGCGCATTGTGCCTAAAT‑gggggggga                                                                                                                                    >  1:983833/1‑63 (MQ=255)

                                                                                   gCTGATGAAACGTCGGTTTTTAGTCATTTTTTGACAGCGGCGCATTGTGCCTAAAT‑gggggggga                                                                                                                                    <  2:983833/65‑3 (MQ=255)

                                                                                    cTGATGAAACGTCGGTTTTTAGTCATTTTTTGACAGCGGCGCATTGTGCCTAAATGGGGGGGGA‑AATGACAAGAGAATGAGAGGCTTGTCAGAATAATTTTTCTTTAAATGGCTGATTTTCCGTCATCAGATTTTGCAt                                                         <  2:1561015/139‑1 (MQ=255)

                                                                                    cTGATGAAACGTCGGTTTTTAGTCATTTTTTGACAGCGGCGCATTGTGCCTAAATGGGGGGGGA‑AATGACAAGAGAATGAGAGGCTTGTCAGAATAATTTTTCTTTAAATGGCTGATTTTCCGTCATCAGATTTTGCAt                                                         <  2:753429/139‑1 (MQ=255)

                                                                                     tgatgaAACGTCGGTTTTTAGTCATTTTTTGACAGCGGCGCATTGTGCCTAAATGGGGGGGGG‑AATGACAAGAGAATGAGAGGCTTGTCAGAATAATTTTTCTTTAAATGGCTGATTTTCCGGCATCAGATTTTGCATa                                                        <  2:1601739/139‑1 (MQ=255)

                                                                                       atgaAACGTCGGTTTTTAGTCATTTTTTGACAGCGGCGCATTGTGCCTAAATGGGGGGGGA‑AATGACAAGAGAATGAGAGGCTTGTCAGAATAATTTTTCTTTAAATGGCTGATTTTCCGTCATCAGATTTTGCATaaa                                                      >  2:1642644/1‑139 (MQ=255)

                                                                                        tgaAACGTCGGTTTTTAGTCATTTTTTGACAGCGGCGCATTGTGCCTAAAt                                                                                                                                              >  2:817267/1‑51 (MQ=255)

                                                                                        tgaAACGTCGGTTTTTAGTCATTTTTTGACAGCGGCGCATTGTGCCTAAAt                                                                                                                                              <  1:817267/51‑1 (MQ=255)

                                                                                           aaCGTCGGTTTTTAGTCATTTTTTGACAGCGGCGCATTGTGCCTAAATGGGGGGGGA‑AATGACAAGAGAATGAGAGGCTTGTCAGAATAATTTTTCTTTAAATGGCTGATTTTCCGTCATCAGATTTTGCATAAACAcc                                                  <  1:1256492/139‑1 (MQ=255)

                                                                                           aaCGTCGGTTTTTAGTCATTTTTTGACAGCGGCGCATTGTGCCTAAATGGGGGGGGA‑AATGACAAGAGAATGAGAGGCTTGTCAGAATAATTTTTCTTTAAATGGCTGATTTTCCGTCATCAGATTTTGCATAAACAcc                                                  <  2:363655/139‑1 (MQ=255)

                                                                                            aCGTCGGTTTTTAGTCATTTTTTGACAGCGGCGCATTGTGCCTAAATGGGGGGGGG‑AATGACAAGAGAATGAGAGGCTTGTCAGAATAATTTTTCTTTAAATGGCTGATTTTc                                                                           >  1:423262/1‑113 (MQ=255)

                                                                                            aCGTCGGTTTTTAGTCATTTTTTGACAGCGGCGCATTGTGCCTAAATGGGGGGGGG‑AATGACAAGAGAATGAGAGGCTTGTCAGAATAATTTTTCTTTAAATGGCTGATTTTc                                                                           <  2:423262/113‑1 (MQ=255)

                                                                                            aCGTCGGTTTTTAGTCATTTTTTGACAGCGGCGCATTGTGCCTAAATGGGGGGGGA‑AATGACAAGAGAATGAGAGGCTTGTCAGAATAATTTTTCTTTAAATGGCTGATTTTCCGTCATCAGATTTTGCATAAACACCg                                                 >  2:1344982/1‑139 (MQ=255)

                                                                                             cGTCGGTTTTTAGTCATTTTTTGACAGCGGCGCATTGTGCCTAAATGGGGGGGGA‑AATGACAAGAGAATGAGAGGCTTGTCAGAATAATTTTTCTTTAAATGGCTGATTTTCCGTCATCAGATTTTGCATAAACACCgg                                                <  1:476326/139‑1 (MQ=255)

                                                                                              gTCGGTTTTTAGTCATTTTTTGACAGCGGCGCATTGTGCCTAAAT‑GGGGGGGGGAATGACAAGAGAATGAGAGGCTTGTCAGAATAATTTTTCTTTAAATGGCTGATTTTCCGTCATCAGATTTTGCATAAACACCGGc                                               <  2:896846/139‑1 (MQ=255)

                                                                                               tCGGTTTTTAGTCATTTTTTGACAGCGGCGCATTGTGCCTAAAT‑gggggggga                                                                                                                                    >  2:1581397/1‑51 (MQ=255)

                                                                                               tCGGTTTTTAGTCATTTTTTGACAGCGGCGCATTGTGCCTAAAT‑GGGGGGGA‑AATGACAAGAGAATGAGAGGCTTGTCAGAATAATTTTTCTTTAAATGGCTGATTTTCCGtca                                                                      <  1:402667/114‑1 (MQ=255)

                                                                                                 ggTTTTTAGTCATTTTTTGACAGCGGCGCATTGTGCCTAAAT‑GGGGGGGGGAATGACAAGAGAATAAGAGGCTTGTCAGAATAATTTTTCTTTAAATGGCTGATTTTCCGTCATCAGATTTTGCATAAACACCGGCGa                                             >  1:1122997/1‑138 (MQ=255)

                                                                                                 ggTTTTTAGTCATTTTTTGACAGCGGCGCATTGTGCCTAAAT‑GGGGGGGA‑AATGACa                                                                                                                             <  1:801075/57‑1 (MQ=255)

                                                                                                   tttttAGTCATTTTTTGACAGCGGCGCATTGTGCCTAAATGGGGGGGGA‑AATGACAAGAGAATGAGAGGCTTGTCAGAATAATTTTTCTTTAAATGGCTGATTTTCCGTCATCAGATTTTGCATAAACACCGGCGATCg                                          <  2:1591578/139‑1 (MQ=255)

                                                                                                             ttttttGACAGCGGCGCATTGTGCCTAAAT‑GGGGGGGA‑AATGACAAGAGAATGAGAGGCTTGTCAGAATAATTTTTCTTTAAATGGCTGATTTTCCGTCATCAGATTTTGCATAAACACCGGCGATCGCACTATTTGCt                               >  1:136778/1‑139 (MQ=255)

                                                                                                                      aGCGGCGCATTGTGCCTAAATGGGGGGGGA‑AATGACAAGAGAATGAGAGGCTTGTCAGAATAATTTTTCTTTAAATGGCTGATTTTCCGTCATCAGATTTTGCATAAACACCGGCGATCGCACTATTTGCTAAAATTTc                       >  1:1203558/1‑139 (MQ=255)

                                                                                                                        cggcgCATTGTGCCTAAATGGGGGGGGG‑AATGACAAGAGAATGAGAGGCTTGTCAGAATAATTTTTCTTTAAATGGCTGATTTTCCGtcatc                                                                    <  2:371676/92‑1 (MQ=255)

                                                                                                                        cggcgCATTGTGCCTAAATGGGGGGGGG‑AATGACAAGAGAATGAGAGGCTTGACAGAATAATTTTTCTTTAAATGGCTGATTTTCCGTGATCAGATTTTGCATAAACCCCGGCGATCGCACTATCTGCTAAAAtttact                     >  1:452580/1‑136 (MQ=255)

                                                                                                                        cggcgCATTGTGCCTAAATGGGGGGGGA‑AATGACAAGAGAATGAGAGGCTTGt                                                                                                           <  1:698866/53‑1 (MQ=255)

                                                                                                                        cggcgCATTGTGCCTAAATGGGGGGGGA‑AATGACAAGAGAATGAGAGGCTTGt                                                                                                           >  2:331105/1‑53 (MQ=255)

                                                                                                                         ggcgCATTGTGCCTAAAT‑GGGGGGGA‑AATGACAAGAGAATGAGAGGCTTGTCAGAATAATTTTTCTTTAAATGGCTGATTTTCCGTCATCAGATTTTGCATAAACACCGGCGATCGCACTATTTGCTAAAATTTCATcc                   <  2:314238/139‑1 (MQ=255)

                                                                                                                          gcgcATTGTGCCTAAATGGGGGGGGA‑AATGACAAGAGAATGAGAGGCTTGTCAGAATAATTTTTCTTTAAATGGCTGATTTTCCGTCATCAGATTTTGCATAAACACCGGCGATCGCACTATTTGCTAAAATTTCATcc                   <  1:162240/139‑1 (MQ=255)

                                                                                                                                 gtgGCTAAATGGGGGGGGG‑GATGACAAGAGAATGGGAGGCTTGTCAGAATAATTTTTCTTTAAATGGCTGATTTTCCGTCATCAGATTTTGCATAAACACCGGCGATCGCACTATTTGCTAAAATTTCATCCCGccacc            <  2:452580/139‑1 (MQ=255)

                                                                                                                                  tgCCTAAATGGGGGGGGA‑AATGACAAGAGAATGAGAGGCTTGTCAGAATAATTTTTCTTTAAATGGCTGATTTTCCGTCATCAGATTTTGCATAAACAcc                                                  <  1:620694/100‑1 (MQ=255)

                                                                                                                                  tgCCTAAAT‑GGGGGGGA‑AATGACAAGAGAATGAGAGGCTTGTCAGAATAATTTTTCTTTAAATGGCTGATTTTCCGTCATCAGATTTTGCATAAACACCGGCGATCGCACTATTTGCTAAAATTTCATCCCGCCACCAg          >  1:182867/1‑139 (MQ=255)

                                                                                                                                   gCCTAAAT‑GGGGGGGA‑AATGACAAGAGAATGAGAGGCTTGTCAGAATAATTTTTCTTTAAATGGCTGATTTTCCGTCATCAGATTTTGCATAAACACCGGCGATCGCACTATTTGCTAAAATTTCATCCCGCCACCAGc         <  1:1529472/139‑1 (MQ=255)

                                                                                                                                    ccTAAATGGGGGGGGA‑AATGACAAGAGAATGAGAGGCTTGTCAGAATAATTTTTCTTTAAATGGCTGATTTTCCGTCATCAGATTTTGCATAAACACCGGCGATCGCACTATTTGCTAAAATTTCATCCCGCCACCAGc         >  2:1245529/1‑139 (MQ=255)

                                                                                                                                      tAAATGGGGGGGGA‑AATGACAAGAGAATGAGAGGCTTGTCAGAATAATTTTTCTTTAAATGGCTGATTTTCCGTCATCAGATTTTGCATAAACACCGGCGATCGCACTATTTGCTAAAATTTCATCCTGCCACCAGCCa       <  1:879313/139‑1 (MQ=255)

                                                                                                                                          t‑GGGGGGGA‑AATGACAAGAGAATGAGAGGCTTGTCAGAATAATTTTTCTTTAAATGGCTGATTTTCCGTCATCAGATTTTGCATAAACACCGGCGATCGCACTATTTGCTAAAATTTCATCCCGCCACCAGCCACTGGc  <  1:158522/139‑1 (MQ=255)

TGTCGATTTTTAGTAAATATCTATCCGGTACGAAGCCCGGCCTCTTGGTATGAATGATTGGTTTGAAGCAAAAAATAACCGACGCTGATGAAACGTCGGTTTTTAGTCATTTTTTGACAGCGGCGCATTGTGCCTAAAT‑GGGGGGGA‑AATGACAAGAGAATGAGAGGCTTGTCAGAATAATTTTTCTTTAAATGGCTGATTTTCCGTCATCAGATTTTGCATAAACACCGGCGATCGCACTATTTGCTAAAATTTCATCCCGCCACCAGCCACTGGC  >  NC_000913/2087142‑2087418

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 16 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 38 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`