| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_LN832404 | 3,204,060:1 | +G | 86.5% | pseudogene (177/605 nt) | ttdB → | L(+)‑tartrate dehydratase subunit beta |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_LN832404 | 3,204,060 | 1 | . | G | 86.5% | 162.6 / 21.2 | 52 | pseudogene (177/605 nt) | ttdB | L(+)‑tartrate dehydratase subunit beta |
| Reads supporting (aligned to +/- strand): ref base . (4/3); new base G (22/23); total (26/26) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.31e-01 | |||||||||||
ATCCGTCAACCATCGGCGTTGCTGTCTCTACCGGCTGCTGGGCGCATCGTCGCGGCACGCTGCTGGTTCATGCCGATCTCACCTTTGAAAATCTGTCTCACACCCGGAGCGCGTTATGAAAAAGATCCTGACAACCCCGATCAAAGCTGAAGATCTGCAAGATATTCGCGTCGGCGATGTGATCTACCTGACCGGTACGCTGGTGACCTGCCGCGACGTTTGTCACCGCCGTTTGATCGAACTGAAACGTCCGATCCCTTACGATCTCAACGGCAAAGCGATTTTCCACG‑CT‑GCCCCATCGTGCGCAAAAACGGCGACAAATGGGAGATGGTCTCCGTCGGCCCGACAACCAGTATGCGTATGGAAAGTTTTGAACGTGAATTTATTGAGCAGACCGGCGTGAAACTGGTGGTTGGCAAAGGTGGTATGGGGCCGCTGACCGAAGAAGGCTGCCAGAAATTCAAGG‑CGCTACATGTGATTTTCCCGGCAGGCTGCGCGGTGCTGGCGGCAACCCAGGTGGAAGAGATTGAAGAAGTGCACTGGA‑CAGAGCTCGGAATGCCGGAGTCACTGTGGGTCTGCCG > NZ_LN832404/3203769‑3204349 | aTCCGTCAACCATCGGCGTTGCTGTCTCTACCGGCTGCTGGGCGCATCGTCGCGGCACGCTGCTGGTTCATGCCGATCTCACCTTTGAAAATCTGTCTCACACCCGGAGCGCGTTATGAAAAAGATCCTGACAACCCCGATCAAAGCTGAAGATCTGCAAGATATTCGCGTCGGCGATGTGATCTACCTGACCGGTACGCTGGTGACCTGCCGCGACGTTTGTCACCGCCGTTTGATCGAACTGAAACGTCCGATCCCTTACGATCTCAACGGCAAAGCGATTTTACCCG‑CT‑gga > 1:615073/1‑293 (MQ=255) ccgtccccctccGGCGTGGCTGTCGCTGCGGGCTGGTGGGGGCAGCGTCGCGGCACGCTGCTGGTGCAGGCCGATCTCACCTTTGAAAATCGGTCTCACACCCGGGGCGCGTTATGAAAAAGATCCTGACAACCCCGATCAAAGCTGAAGAGCTGCAAGATATTCGCGTCGGCGATGTGATCTACCTGACCGGTACGCTGGTGACCTGCCGCGACGTTTGTCACCGCCGTTTGATCGAACTGAAACGTCCGATCCCTTACGATCTCAACGGCAAAGCGATTTTCCACG‑CT‑Ggccc < 2:765495/284‑1 (MQ=255) ggCGTTGCTGTCTCTACCGGCTGCTGGGCGCATCGTCGCGGCACGCTGCTGGTTCATGCCGATCTCACCTTTGAAAATCTGTCTCACACCCGGAGCGCGTTATGAAAAAGATCCTGACAACCCCGATCAAAGCTGAAGATCTGCAAGATATTCGCGTCGGCGATGTGATCTACCTGACCGGTACGCTGGTGACCTGCCGCGACGTTTGTCACCGCCGTTTGATCGAACTGAAACGTCCGATCCCTTACGAACTCAACGGCAAAGCGATTTTCCACG‑CTGGCCCCATCGTGCGCaa > 1:357102/1‑295 (MQ=255) tACCGGCTGCTGGGCGCATCGTCGCGGCACGCTGCTGGTTCATGCCGATCTCACCTTTGAAAATCTGTCTCACACCCGGAGCGCGTTATGAAACAGATCCTGACAACCCCGATCAAAGCTGAAGATCTGCAAGATATTCGCGTCGGCGATGTGATCTACCTGACCGGTACGCTGGTGACCTGCCGCGACGTTTGTCACCGCCGTTTGATCGAACTGAAACCTCCGAACCCTTTCGATCCCAACGGCACAGCGATTTTCCCCGCCG‑GCCCCATCCGGCGCCAAAACGGCGCCAAAt > 2:580619/1‑295 (MQ=255) gctgctGGGCGCATCGTCGCGGCACGCTGCTGGTTCATGCCGATCTCACCTTTGAAAATCTGTCTCACACCCGGAGCGCGTTATGAAAAAGATCCTGACAACCCCGATCAAAGCTGAAGATCTGCAAGATATTCGCGTCGGCGATGTGATCTACCTGACCGGTACGCTGGTGACCTGCCGCGACGTTTGTCACCGCCGTTTGATCGAACTGAAACGTCCGATCCCTTACGATCTCAACGGCAAAGCGATTTTCCACG‑CTGGCCCCATCGTGCGCAAAAACGGCGACAAATGGgag > 1:234170/1‑295 (MQ=255) ctgctgGGCGCATCGTCGCGGCACGCTGCTGGTTCATGCCGATCTCACCTTTGAAAATCTGTCTCACACCCGGAGCGCGTTATGAAAAAGATCCTGACAACCCCGATCAAAGCTGAAGATCTGCAAGATATTCGCGTCGGCGATGTGATCTACCTGACCGGTACGCTGGTGACCTGCCGCGACGTTTGTCACCGCCGTTTGATCGAACTGAAACGTCCGATCCCTTACGATCTCAACGGCAAAGCGATTTTCCACG‑CTGGCCCCATCGTGCGCAAAAACGGCGACAAATGGgaga < 1:445589/295‑1 (MQ=255) tgctgGGCGCATCGTCGCGGCACGCTGCTGGTTCATGCCGATCTCACCTTTGAAAATCTGTCTCACACCCGGAGCGCGTTATGAAAAAGATCCTGACAACCCCGATCAAAGCTGAAGATCTGCAAGATATTCGCGTCGGCGATGTGATCTACCTGACCGGTACGCTGGTGACCTGCCGCGACGTTTGTCACCGCCGTTTGATCGAACTGAAACGTCCGCTCCCTTACGATCTCACCGGCAAAGCGATTTTCCACG‑CTGGCCCCATCGTGCGCAAAACCGGCGACAAATggacaat > 2:621349/1‑290 (MQ=255) tgctgGGCGCATCGTCGCGGCACGCTGCTGGTTCATGCCGATCTCACCTTTGAAAATCTGTCTCACACCCGGAGCGCGTTATGAAAAAGATCCTGACAACCCCGATCAAAGCTGAAGATCTGCAAGATATTCGCGTCGGCGATGTGATCTACCTGACCGGTACGCTGGTGACCTGCCGCGACGTTTGTCACCGCCGTTTGATCGAACTGAAACGTCCGATCCCTTACGATCTCAACGGCAAAGCGATTTTCCACG‑CTGGCCCCATCGTGCGCAAAAACGGCGACAAATGGGAGAt > 1:73762/1‑295 (MQ=255) tgcgttgcgcAGCGGCGCGTCACGCTGCTGGTTCATGCCGATCTCACCTGTGAAAATCTGTCTCACACCCGGAGCGCGTTATGAAAAAGATCCTGACAACCCCGATCAAAGCTGAAGATCTGCAAGATATTCGCGTCGGCGATGTGATCTACCTGACCGGTACGCTGGTGACCTGCCGCGACGTTTGTCACCGCCGTTTGATCGAACTGAAACGTCCGATCCCTTACGATCTCAACGGCAAAGCGATTTTCCACG‑CTGGCCCCATCGTGCGCAAAAACGGCGACAAATGGGAGAt < 2:641362/289‑1 (MQ=255) gcggCGCATCGTCGCGGCACCCTGCGGGTTCATGCCGATCCCACCTTTGAAAATCGGTCCCACACCCGGAGCGCGTTATGAAAAAGATCCTGACAACCCCGATCAAAGCGCAAGATCTGCAAGATATGCGCGTCGGCGATGTGATCTACCTGACCGGTACGCGGGTGACCTGCCGCGACGTTTGTCACCGCCGTTTGATCGAACTGAAACGTCCGATCCCTTACGATCTCAACGGCAAAGCGATTTTCCACG‑CTGGCCCCATCGTGCGCAAAAACGGCGACAAATGGGAGATGGt < 1:112854/293‑1 (MQ=255) gtcATCGCCGCGTCACTCTGCTGGTTCAAGCCGAGCACACCTGTGAAAATCGGTCTCACAACCTGAGCGCGTTATGAAAAAGATCCGAACAACCCCGATCAAAGCGGAAGATCTGCAAGATAGTCGGGTCGGCGAGGTGATCTACCTGACCGGTACGCTGGTGACCTGCCGCGACGTTTGTCACCGCCGTTTGATCGAACTGAAACGTCCGATCCCTTACGATCTCAACGGCAAAGCGATTTTCCACG‑CTGGCCCCATCGTGCGCAAAAACGGCGACAAATGGGAGATGGTCTcc < 2:599331/293‑1 (MQ=255) ggCACGCTGCTGGTTCATGCCGATCTCACCTTTGAAAATCTGTCTCACACCCGGAGCGCGTTATGAAAAAGATCCTGACAACCCCGATCAAAGCTGAAGATCTGCAAGATATTCGCGTCGGCGATGTGATCTACCTGCCCGGTACGCTGGTGACCTGCCGCGACGTTTGTCACCGCCGTTTGATCGAACTGAAACGTCCGATCCCTTACGATCTCAACGGCAAAGCGATTTTCCACG‑CT‑GCCCCCTCGTGCGCACAAACGGCGACAAATGGGAGCTGGTCTCCGGCGGCCCGACa > 2:512300/1‑295 (MQ=255) gCCGATCTCACCTTTGAAAATCTGTCTCACACCCGGAGCGCGTTATGAAAAAGATCCTGACAACCCCGATCAAAGCTGAAGATCTGCAAGATATTCGCGTCGGCGATGTGATCTACCTGACCGGTACGCTGGTGACCTGCCGCGACGTTTGTCACCGCCGTTTGATCGAACTGAACCGTCTGATCCCTCACGATCTCAACGGCAAAGCGCTTTTCCACG‑CTGGCCCCACCGTTCACAAAAACCGCCACAAATGGGGGCTGGTCCCCGTCCGCCCGACCACCAGTacgagaagggt > 2:393874/1‑285 (MQ=255) tatccACCTTTTAAAACCGTTCTACCACCCTGTGCACGTTATGATAAAGATCCTGACAACCCCGTGCACAGCTGAGTATTTGCAAGATATTCGCTTCGGCGATGTGTGCTACCTGACCGGTACGCTGGTGACCTGCCGCGACGTTGGTCACCGCCGTTTGATCGAACTGAAACGTCCGATCCCTTACTATCTCAACGGCAAAGCGATTTTCCACG‑CTGGCCCCATCGTGCGCAAAAACGGCGACAAATGGGAGATGGTCTCCGTCGGCCCGACAACCAGTATGCGTATGGAAAGt < 2:768986/291‑1 (MQ=255) ccTTTGAAAATCTGTCTCACACCCGGAGCGCGTTATGAAAAAGATCCTGACAACCCCGATCAAAGCTGAAGATCTGCAAGATATTCGCGTCGGCGATGTGATCTACCTGACCGGTACGCTGGTGACCTGCCGCGACGTTTGTCACCGCCGTTTGATCGAACTGAAACGTCCGATCCCTTACGATCTCAACGGCAAAGCGATTTTCCACG‑CTGGCCCCATCGTGCGCAAAAACGGCGACAAATGGGAGATGTTCTCCGTCGGCCCGACAACCAGTATGCGTATGGAAAGTTTTGaa > 1:212130/1‑295 (MQ=255) cTTTGAAAATCTGTCGCACACCCGGAGCGCGTTATGAAAAAGATCCTGACAACCCCGATCAAAGCTGAAGATCTGCAAGATATTCGCGTCGGCGATGTGATCTACCTGACCGGTACGCTGGTGACCTGCCGCGACGTTTGTCACCGCCGTTTGATCGAACTGAAACGTCCGATCCCTTACGATCTCAACGGCAAAGCGATTTTCCACG‑CTGGCCCCATCGTGCGCAAAAACGGCGACAAATGGGAGATGGTCTCCGTCGGCCCGACAACCAGTATGCGTATGGAAAGTTTTGAAc < 1:32558/295‑1 (MQ=255) aaactgccctgccacCCGGCGCGCTGTATGAAAAAGCGCCTGCCAACCCCGATCAAAGCTGAAGATCTGCAATATGTTCGCGTCGGCTGTGTGATCTACCGGACCGGCACGCGGGGGACCTGCCGCGACGTTTGTCACCGCCGTTTGATCGAACTGAAACGTCCGATCCCTTACGATCTCACCGGCAAAGCGATTTTCCACG‑CTGGCCCCATCGTGCGCAAAAACGGCGACAAATGGGAGATGGTCTCCGTCGGCCCGACAACCAGTATGCGTATGGAAAGTTTTGAACGTGAAt < 2:666573/283‑1 (MQ=255) cgccctcACACCCGGAGCGCGTTATGAAAAAGATCCTGACAACCCCGATCAAAGCTGAAGATCTGCAAGATATTCGCGTCGCCGAGGTGATCTACCTGACCGGTACGCTGGTGACCTGCCGCTACGTTTGTCACCGCCGTTTGATCGAACTGAAACGTCCGATCCCTTACGATCTCAACGGCAAAGCGATTTTCCACG‑CTGGCCCCATCGTGCGCAAAAACGGCGACAAATGGGAGATGGTCTCCGTCGGCCCGACAACCAGTATGCGTATGGAAAGTTTTGAACGTGAATTTAt < 1:382237/291‑1 (MQ=255) cTGTCTCACACCCGGAGCGCGTTATGAAAAAGATCCTGACAACCCCGATCAAAGCTGAAGATCTGCAAGATATTCGCGTCGGCGATGTGATCTACCTGACCGGTACGCTGGTGACCTGCCGCGACGTTTGTCACCGCCGTTTGATCGAACTGAAACGTCCGATCCCTTACGATCTCAACGGCAAAGCGATTTTCCACG‑CTGGCCCCATCGTGCGCAAAAACGGCGACAAATGGGAGATGGTCTCCGTCGGCCCGACAACCAGTATGCGTATGGAAAGTTTTGAACGTGAATTTAt < 1:560813/295‑1 (MQ=255) tctcACACCCGGAGCGCGTTATGAAAAAGATCCTGACAACCCCGATCAAAGCTGAAGATCTGCAAGATATTCGCGTCGGCGATGTGATCTACCTGACCGGTACGCTGGTGACCTGCCGCGACGTTTGTCACCGCCGTTTGATCGAACTGAAACGTCCGATCCCTTACGATCTCAACGGCAAAGCGCTTTTCCACG‑CTGGCCCCATCGTGCGCAAAAACGGCGACAAATGGGAGATGGTCTCCGTCGGCCCGACAACCAGTCTGCGGATGGAACGTTTTGAAGGTGAATTTAGTgc > 2:473621/1‑294 (MQ=255) cGGAGCGCGTTATTAAAAAGATCCTTACAACCCCGAACAAAGCTGAAGATCTGCAAGATATTCGCGTCGGCGATGTGATCTACCTGACCGGTACGCTGGTGACCTGCCGCGACGTTTGTCACCGCCGTTTGATCGAACTGAAACGTCCGATCCCTTACGATCTCAACGGCAAAGCGATTTTCCACG‑CT‑GCCCCATCGTGCGCAAAAACGGCGACAAATGGGAGATGGTCTCCGTCGGCCCGACAACCAGTATGCGTATGGAAAGTTTTGAACGTGAATTTATTGAGCAGACCGGc < 1:211800/295‑1 (MQ=255) gTTATGAAAAAGATCCTGACAACCCCGATCAAAGCTGAAGATCTGCAAGATATTCGCGTCGGCGATGTGATCTACCTGACCGGTACGCTGGTGACCTGCCGCGACGTTTGTCACCGCCGTTTGATCGAACTGAAACGTCCGATCCCTTACGATCTCAACGGCAAAGCGATTTTCCACG‑CTGGCCCCATCGTGCGCAAAAACGGCGACAAATGGGAGATGGTCTCCGTCGGCCCGACAACCAGTATGCGTATGGAAAGTTTTGAACGTGAATTTATTGAGCAGACCGGCGTGAAAc > 1:79466/1‑295 (MQ=255) tGAAAAAGATCCTGACAACCCCGATCAAAGCTGAAGATCTGCAAGATATTCGCGTCGGCGATGTGATCTACCTGACCGGTACGCTGGTGACCTGCCGCGACGTTTGTCACCGCCGTTTGATCGAACTGAAACGTCCGATCCCTTACGATCTCAACGGCAAAGCGATTTTCCACG‑CT‑GCCCCATCGTGCGCAAAAACGGCGACAAATGGGAGATGGTCTCCGTCGGCCCGACAACCAGTATGCGTATGGAAAGTTTTGAACGTGAATTTATTGAGCAGACCGGCGTGAAACtggtg < 1:667470/295‑1 (MQ=255) aaaGATCCTGACAACCCCGATCAAAGCTGAAGATCTGCAAGATATTCGCGTCGGCGATGTGATCTACCTGACCGGTACGCTGGTGACCTGCCGCGACGTTTGTCACCGCCGTTTGATCGAACTGAAACGTCCGATCCCTTACGATCTCAACGGCAAAGCGATTTTCCACG‑CTGGCCCCATCGTGCGCAAAAACGGCGACAAATGGGAGATGGTCTCCGTCGGCCCGACAACCAGTATGCGTATGGAAAGTTTTGAACGTGAATTTATTGAGCAGACCGGCGTGAAACTGGGGGtt > 1:698469/1‑295 (MQ=255) aagcccTGTCAACCCCGTCCAAGTCGGAGGTTCTCCAAGATTTGCGGTTCGGCGATGTGATTTACCTGACCGGTACGCTGGGGACCTGCCGCGACGTTGGTCACCGCCGTTTGATCGAACTGAAACGTCCGATCCCTTACGATCTCAACGGCAAAGCGATTTTCCACG‑CTGGCCCCATCGTGCGCAAAAACGGCGACAAATGGGAGATGGTCTCCGTCGGCCCGACAACCAGTATGCGTATGGAAAGTTTTGAACGTGAATTTATTGAGCAGACCGGCGTGAAACTGGTGGTTgg < 2:603070/291‑1 (MQ=255) taCAACCCCGTTCAAAGCTGTAGATCTGCAAGATATTCGCGTCGGCGATGTGATCTACCTGACCGGTACGCTGGTTACCTGCCGCGACGTTTGTCACCGCCGTTTGATCGAACTGAAACGTCCGAGCCCTTACGATCTCAACGGCAAAGCGATTTTCCACG‑CTGGCCCCATCGTGCGCAAAAACGGCGACAAATGGGAGATGGTCTCCGTCGGCCCGACAACCAGTATGCGTATGGAAAGTTTTGAACGTGAATTTATTGAGCAGACCGGCGTGAAACTGGTGGTTGGCAAAggt < 1:638549/294‑1 (MQ=255) aTCAACGCTGAAGATCTGCAAGATATTCGCGTCGGCGATGTGATCTACCTGACCGGTACGCTGGTGACCTGCCGCGACGTTTGTCACCGCCGTTTGATCGAACTGAAACGTCCGATCCCTTACGATCTCAACGGCAAAGCGATTTTCCACG‑CTGGCCCCATCGTGCGCAAAAACGGCGACAAATGGGAGATGGTCTCCGTCGGCCCGACAACCAGTATGCGTATGGAAAGTTTTGAACGTGAATTTATTGAGCAGACCGGCGTGAAACTGGTGGTTGGCAAAGGTGGTATGGGGc < 1:272464/295‑1 (MQ=255) aTCAAAGCTGAAGATCTGCAAGATATTCGCGTCGGCGATGTGATCTACCTGACCGGTACGCTGGTGACCTGCCGCGACGTTTGTCACCGCCGTTTGATCGAACTGAAACGTCCGATCCCTTACGATCTCAACGGCAAAGCGATTTTCCACG‑CTGGCCCCATCGTGCGCAAAAACGGCGACAAATGGGAGATGGTCTCCGTCGGCCCGACAACCAGTATGCGTATGGAAAGTTTTGAACGTGAATTTATTGAGCAGACCGGCGTGAAACTGGTGGTTGGCAAAGGTGGTATGGGGc < 1:621349/295‑1 (MQ=255) ctcttccgatctaTCTGCAAGATATTCGCGTCGGCGATGTGATCTACCTGACCGGTACGCTGGTGACCTGCCGCGACGTTTGTCACCGCCGTTTGATCGAACTGAAACGTCCGATCCCTTACGATCTCAACGGCAAAGCGATTTTCCACG‑CTGGCCCCATCGTGCGCAAAAACGGCGACAAATGGGAGATGGTCTCCGTCGGCCCGACAACCAGTATGCGTATGGAAAGTTTTGAACGTGAATTTATTGAGCAGACCGGCGTGAAACTGGTGGTTGGCAAAGGTGGTATGGGGcc < 1:208760/283‑1 (MQ=255) cAAAGCTGAAGATCTGCAAGATATTCGCGTCGGCGATGTGATCTACCTGACCGGTACGCTGGTGACCTGCCGCGACGTTTGTCACCGCCGTTTGATCGAACTGAAACGTCCGATCCCTTACGATCTCAACGGCAAAGCGATTTTCCACG‑CTGGCCCCATCGTGCGCCAAAACGGCGACAAATGGGAGATGGTCTCCGTCGGCCCGACAACCAGTACGCGTCTGGAAAGTGTGGAACGTGAATTTATTGCGCAGACCGGCGTGAAACTGTGGGTTGGCAAAGGGGGGATGGGGCCg > 2:131959/1‑295 (MQ=255) agcataaGATCTGCGAGATATTCGCGTCGGCGATGTGATCTACCTAACCGGGACGCTGGTGACCTGCCGCGACGTTTGGCACCGCCGGTTGATCGAACTGAAACGTCCGATCCCTTACGATCTCAACGGCAAAGCGATTTTCCACG‑CTGGCCCCATCGTGCGCAAAAACGGCGACAAATGGGAGATGGTCTCCGTCGGCCCGACAACCAGTATGCGTATGGAAAGTTTTGAACGTGAATTTATTGAGCAGACCGGCGTGAAACTGGTGGTTGGCAAAGGTGGTATGGGGCCGCTg < 2:465195/290‑1 (MQ=255) aTCTGCAAGATATTCGCGTCGGCGATGTGATCTACCTGACCGGTACGCTGGTGACCTGCCGCGACGTTTGTCACCGCCGTTTGATCGAACTGAAACGTCCGATCCCTTACGATCTCAACGGCAAAGCGATTTTCCACG‑CTGGCCCCATCGTGCGCAACAACGGCGACAAATGGGAGATGGTCTCCGTCGGCCCGACAACCAGTATGCGACTGGAAAGGTTTGAACGTGAATTTATTGAGCAGACCGGCGTGAAAACGGGGGGTGGGAAGGGTGGGATgggggcaggcagggagga > 2:208760/1‑281 (MQ=255) gTCGGCGATGTGATCTACCTGACCGGTACGCTGGTGACCTGCCGCGACGTTTGTCACCGCCGTTTGATCGAACTGAAACGTCCGATCCCTTACGATCTCAACGGCAAAGCGATTTTCCACG‑CTGGCCCCATCGTGCGCAAAAACGGCGACAACTGGGAGATGGTCTCCGTCGGCCCGACAACCAGTATGCGTCTGGAAAGTTTTGAAAGTGAATTTATTGAGCAGACCGGCGTGAAACTGGTGGTTGGCACAGGTGGTATGGGGCCGCTTACCGAAGACGGCTGCCAGaaactta > 2:298997/1‑291 (MQ=255) gTCGGCGATGTGAGTTTCCTGACCGGTACGCGGGGGACCAGCCACGACGGTGGTCACCGCCGTTTTATCGAACGGAAACGTCCGATCCCTTACGATATCAACGGCAAAGCGGTTTTCCACG‑CTGGCCCCATCGTGCGCAAAGACGGCGACAAATGGGGGATGGTCTCCGTCGGCCCGACAACCAGTATGCGTATGGAAAGTTTTGAACGTGAATTTATTGAGCAGACCGGCGTGAAACTGGTGGTTGGCAAAGGTGGTATGGGGCCGCTGACCGAAGAAGGCTGCCAGAAATTCa < 2:331311/295‑1 (MQ=255) gATGTGATCTACCTGACCGGTACGCTGGTGACCTGCCGCGACGTTTGTCACCGCCGTTTGATCGAACTGAAACGTCCGATCCCTTACGATCTCAACGGCAAAGCGATTTTCCACG‑CTGGCCCCATCGTGCGCAAAAACGGCGACAAATGGGAGATGGTCTCCGTCGGCCCGACAACCAGTATGCGTATGGAAAGTTTTGAACGTGAATTTATTGAGCAGACCGGCGTGAAACTGGTGGTTGGCAAAGGTGGTATGGGGCCGCTGACCGAAGAAGGCTGCCAGAAATTCAAGg‑cgc > 1:652310/1‑295 (MQ=255) gATGTGATCTACCTGACCGGTACGCTGGTGACCTGCCGCGACGTTTGTCACCGCCGTTTGATCGAACTGAAACGTCCGATCCCTTACGATCTCAACGGCAAAGCGATTTTCCACG‑CT‑GCCCCATCGTGCGCAAAAACGGCGACAAATGGGAGATGGTCTCCGTCGGCCCGACAACCAGTATGCGTATGGAAAGTTTTGAACGTGAATTTATTGAGCAGACCGGCGTGAAACTGGTGGTTGGCAAAGGTGGTATGGGGCCGCTGACCGAAGAAGGCTGCCAGAAATTCAAGG‑CGCt > 1:606844/1‑295 (MQ=255) gATCTACCTGACCGGGACGCTGGTGACCTGCCGCGACGTTTGTCACCGCCGTTTGATCGAACTGAAACGTCCGATCCCTTACGATCTCAACGGCAAAGCGATTTTCCACG‑CTGGCCCCATCGTGCGCAAAAACGGCGACAAATGGGAGATGGTCTCCGTCGGCCCGACAACCAGTATGCGTATGGAAAGTTTTGAACGTGAATTTATTGAGCAGACCGGCGTGAAACTGGTGGTTGGCAAAGGTGGTATGGGGCCGCTGACCGAAGAAGGCTGCCAGAAATTCAAGG‑CGCTACAt < 1:564078/295‑1 (MQ=255) tCTACCGGACCGGTACGCTGGTGACCTGCCCGGACGGTTGTAACCGCCGTTTGATCGAACTGAAACGTCCGATCCCTTACGATCTAAACGGAAAAGCGATTTTCCACG‑CTGGCCCCATCGTGCGCAAAAACGGCGACAAATGGGAGATGGTCTCCGTCGGCCCGACAACCAGTATGCGTATGGAAAGTTTTGAACGTGAATTTATTGAGCAGACCGGCGTGAAACTGGTGGTTGGCAAAGGTGGTATGGGGCCGCTGACCGAAGAAGGCTGCCAGAAATTCAAGG‑CGCTACAtgt < 2:234170/295‑1 (MQ=255) aCGCTGGTGACCTGCCGCGACGTTTGTCACCGCCGTTTGATCGAACTGAAACGTCCGATCCCTTACGATCTCAACGGCAAAGCGATTTTCCACG‑CTGGCCCCATCGTGCGCAAAAACGGCGACAAATGGGAGATGGTCTCCGTCGGCCCGACAACCAGTATGCGTATGGAAAGTTTTGAACGTGAATTTATTGAGCAGACCGGCGGGAAACTGGTGGTTGGCACAGGTTGTATGGGGCCGCTGCCCGGAGAAGCAGGCCAAACATTCCAGGCCGCCACA‑CTGATTTTCCCggtat > 2:434278/1‑292 (MQ=255) cGCTGGTTACCTGCGTCGACGTTGTTCACCGCCGTTTGATCGAACTGAAACGTCCGATCCCTTACGATCTCAACGGCAAAGCGATTTTCCACG‑CTGGCCCCATCGTGCGCAAAAACGGCGACAAATGGGAGATGGTCTCCGTCGGCCCGACAACCAGTATGCGTATGGAAAGTTTTGAACGTGAATTTATTGAGCAGACCGGCGTGAAACTGGTGGTTGGCAAAGGTGGTATGGGGCCGCTGACCGAAGAAGGCTGCCAGAAATTCAAGG‑CGCTACATGTGATTTTCCCGGCAgg < 1:382149/295‑1 (MQ=255) ccGCGACGTTTGTCACCGCCGTTTGATCGAACTGAAACGTCCGATCCCTTACGATCTCAACGGCAAAGCGATTTTCCACG‑CT‑GCCCCATCGTGCGCAAAAACGGCGACAAATGGGAGATGGTCTCCGTCGGCCCGACAACCAGTATGCGTATGGAAAGTTTTGAACGTGAATTTATTGAGCAGACCGGCGTGAAACTGGTGGTTGGCAAAGGTGGTATGGGGCCGCTGACCGAAGAAGGCTGCCAGAAATTCAAGG‑CGCTACATGTGATTTTCCCGGCAGGCTGCGCGGTGCTgg > 1:140218/1‑295 (MQ=255) ttGTCACCGCCGTTTGATCGAACTGAAACGTCCGATCCCTTACGATCTCAACGGCAAAGCGATTTTCCACG‑CTGGCCCCATCGTGCGCAAAAACGGCGACAAATGGGAGATGGTCTCCGTCGGCCCGACAACCAGTATGCGTATGGAAAGTTTTGAACGTGAATTTATTGAGCAGACCGGCGTGAAACTGGTGGTTGGCAAAGGTGGTATGGGGCCGCTGACCGAAGAAGGCTGCCAGAAATTCAAGG‑CGCTACATGTGATTTTCCCGGCAGGCTGCGCGGTGCTGGCGGCAAcc < 1:381850/295‑1 (MQ=255) tCACCGCCGTTTGATCGAACTGAAACTTCCGATCCCCTACGATCGCAACGGCAAAGCGATTTTCCACG‑CTGGCCCCATCGTGCGCAAAAACGGCGAAAAATGGGGGATGGTCTCCGTCGGCCCGACAACCAGTATGCGTATGGAAAGTTTTGAACGTGAATTTATTGAGCAGACCGGCGTGAAACTGGTGGTTGGCAAAGGTGGTATGGGGCCGCTGACCGAAGAAGGCTGCCAGAAATTCAAGG‑CGCTACATGTGATTTTCCCGGCAGGCTGCGCGGTGCTGGCGGCAACCCAg < 2:73762/295‑1 (MQ=255) tCGAACTGAAACGTCCGATCCCTTACGATCTCAACGGCAAAGCGATTTTCCACG‑CTGGCCCCATCGTGCGCAAAAACGGCGACAAATGGGAGATGGTCTCCGTCGGCCCGACAACCAGTATGCGTATGGAAAGTTTTGAACGTGAATTTATTGAGCAGACCGGCGTGAAACTGGTGGTTGGCAAAGGTGGTATGGGGCCGCTGACCGAAGAAGGCTGCCAGAAATTCAAGG‑CGCTACATGTGATTTTCCCGGCAGGCTGCGCGGTGCTGGAGGCAACCCAGGTGGAAGAGATTga > 1:601594/1‑295 (MQ=255) gAACTGAAACGTCCGATCCCTTACGATCTCAACGGCAAAGCGATTTTCCACG‑CT‑GCCCCATCGTGCGCAAAAACGGCGACAAATGGGAGATGGTCTCCGTCGGCCCGACAACCAGTATGCGTATGGAAAGTTTTGAACGTGAATTTATTGAGCAGACCGGCGTGAAACTGGTGGTTGGCAAAGGTGGTATGGGGCCGCTGACCGAAGAAGGCTGCCAGAAATTCAAGG‑CGCTACATGTGATTTTCCCGGCAGGCTGCGCGGTGCTGGCGGCAACCCAGGTGGACGAGATTgaaga > 1:184814/1‑295 (MQ=255) tGAAACGTCCGAGCCCTTACGATCTCAACGGCAAAGCGATTTTCCACG‑CTGGCCCCATCGTGCGCAAAAACGGCGACAAATGGGAGATGGTCTCCGTCGGCCCGACAACCAGTATGCGTATGGAAAGTTTTGAACGTGAATTTATTGAGCAGACCGGCGTGAAACTGGTGGTTGGCAAAGGTGGTATGGGGCCGCTGACCGAAGAAGGCTGCCAGAAATTCAAGG‑CGCTACATGTGATTTTCCCGGCAGGCTGCGCGGTGCTGGCGGCAACCCAGGTGGAAGAGATTGAAGAAGt < 1:471422/295‑1 (MQ=255) gAAACGTCCGATCCCTTACGATCTCAACGGCAAAGCGATTTTCCACG‑CTGGCCCCATCGTGCGCAAAAACGGCGACAAATGGGAGATGGTCTCCGTCGGCCCGACAACCAGTATGCGTATGGAAAGCTTTGAACGTGAATTTATTGAGCAGACCGGCGTGAAACTGGTGGTTGGCAAAGGTGGTATGGGGCCGCTGACCGAAGAAGGCTGCCAGAAATTCAAGG‑CGCTACATGTGATTTTCCCGGCCGGCTGCGCGGTGCTGGCGGCAACCCATGTGGCAGAGATTGAAGAAGTg > 1:224585/1‑295 (MQ=255) aaCGTCCGATCCCTTACGATCTCAACGGCAAAGCGATTTTCCACG‑CTGGCCCCATCGTGCGCAAAAACGGCGACAAATGGGAGATGGTCTCCGTCGGCCCGACAACCAGTATGCGTATGGAAAGTTTTGAACGTGAATTTATTGAGCAGACCGGCGTGAAACTGGTGGTTGGCAAAGGTGGTATGGGGCCGCTGACCGAAGAAGGCTGCCAGAAATTCAAGG‑CGCTACATGTGATTTTCCCGGCAGGCTGCGCGGTGCTGGCGGCAACCCAGGTGGAAGAGATTGACGAAGTGCa > 1:402184/1‑295 (MQ=255) ccTTACGATCTCAACGGCAAAGCGATTTTCCACG‑CTGGCCCCATCGTGCGCAAAAACGGCGACAAATGGGAGATGGTCTCCGTCGGCCCGACAACCAGTATGCGTATGGAAAGTTTTGAACGTGAATTTATTGAGCAGACCGGCGTGAAACTGGTGGTTGGCAAAGGTGGTATGGGGCCGCTGACCGAAGAAGGCTGCCAGAAATTCAAGG‑CGCTACATGTGATTTTCCCGGCAGGCTGCGCGGTGCTGGCGGCAACCCAGGTGGAAGAGATTGAAGAAGTGCACTGGA‑CAGAGc > 1:532063/1‑295 (MQ=255) cGACCTCAACGTCAAAGCGATATTCCACG‑CT‑GCCCCATCGTGCGGAAAAACGGCGACAAATGGGAGATGGTCTCCGTCGGCCCGACAACCAGTATGCGTATGGAAAGTTTTGAACGTGAATTTATTGAGCAGACCGGCGTGAAACTGGTGGTTGGCAAAGGTGGTATGGGGCCGCTGACCGAAGAAGGCTGCCAGAAATTCAAGG‑CGCTACATGTGATTTTCCCGGCAGGCTGCGCGGTGCTGGCGGCAACCCAGGTGGAAGAGATTGAAGAAGTGCACTGGA‑CAGAGCTCGGaa < 2:297046/295‑1 (MQ=255) cAACGGCAAAGCGATTTTCCACG‑CTGGCCCCATCGTGCGCAAAAACGGCGACAAATGGGAGATGGTCTCCGTCGGCCCGACAACCAGTATGCGTATGGAAAGTTTTGAACGTGAATTTATTGAGCAGACCGGCGTGACACTGGTGGTTGGCAAAGGTGGTATGGGGCCGCTGACCGAAGAAGGCTGCCAGAAATTCAAGG‑CGCTACATGTGATTTTCCCGGCAGGCTGCGCGGTTCTGGCGGCCACCCAGGTGGCAGGGATTGAAGAAGTTCACTGGA‑CCGGGCtagtgattacg > 2:502885/1‑285 (MQ=255) aaaCGGCAAAGCGGTTGTCTCCC‑CT‑GCCCCAACGTGCGCAAAAACGGGGACAAAGGGGAGAGGGTTTCCGTCGGCCCGACAACCAGTATGCGTATGGAAAGTGTTGAACGTGAAGTTATTGAGCAGACCGGCGTGAAACTGGTGGTTGGCAAAGGTGGTATGGGGCCGCTGACCGAAGAAGGCTGCCAGAAATTCAAGG‑CGCTACATGTGATTTTCCCGGCAGGCTGCGCGGTGCTGGCGGCAACCCAGGTGGAAGAGATTGAAGAAGTGCACTGGA‑CAGAGCTCGGAATGCCgg < 2:344455/294‑1 (MQ=255) aaCGGCAAAGCGATTTTCCACG‑CTGGCCCCATCGTGCGCAAAAACGGCGACAAATGGGAGATGGTCTCCGTCGGCCCGACAACCAGTATGCGTATGGAAAGTTTTGAACGTGAATTTATTGAGCAGACCGGCGTGAAACTGGTGGTTGGCAAAGGTGGTATGGGGCCGCTGACCGAAGAAGGCTGCCAGAAATTCAAGG‑CGCTACATGTGATTTTCCCGGAAGGCTGCGCGGTGCTGGCGGCAACCCAGGGGGCAGTGGGTGAAGAAGTGCACTGGACCAGA‑CTCGGAAGGCAgg > 2:436395/1‑295 (MQ=255) gCAAAGCGATTTTCCCCG‑CTGGCCCCATCGTGCGCAAAAAGGGCTAAAAATGGGAGATGGTCTCCGTCGGCCCGACAACCAGTATGCGTATGGAAAGTTTTGAACGTGAATTTATTGAGCAGACCGGCGTGAAACTGGTGGTTGGCAAAGGTGGTATGGGGCCGCTGACCGAAGAAGGCTGCCAGAAATTCAAGG‑CGCTACATGTGATTTTCCCGGCAGGCTGCGCGGTGCTGGCGGCAACCCAGGTGGAAGAGATTGAAGAAGTGCACTGGA‑CAGAGCTCGGAATGCCGGAGTc < 2:698469/295‑1 (MQ=255) gCAAAGCGATTTTCCACG‑CTGGCCCAATCGGGCGCAAAAACGGCGACAAATGGGGGATGGTCTCGGTCGGCCCGACAACCAGTATGCGTATGGAAAGTTTTGAACGTGAATTTATTGAGCAGACCGGCGTGAAACTGGTGGTTGGCAAAGGTGGTATGGGGCCGCTGACCGAAGAAGGCTGCCAGAAATTCAAGG‑CGCTACATGTGATTTTCCCGGCAGGCTGCGCGGTGCTGGCGGCAACCCAGGTGGAAGAGATTGAAGAAGTGCACTGGA‑CAGAGCTCGGAATGCCGGAGTc < 2:55960/295‑1 (MQ=255) aaGCTATTTTCCACG‑CTGGCCCCATCGTGCGCAAAAACGGCGACAAATGGGAGATGGTCTCCGTCGGCCCGACAACCAGTATGCGTATGGAAAGTTTTGAACGTGAATTTATTGAGCAGACCGGCGTGAAACTGGTGGTTGGCAAAGGTGGTATGGGGCCGCTGACCGAAGAAGGCTGCCAGAAATTCAAGG‑CGCTACATGTGATTTTCCCGGCAGGCTGCGCGGTGCTGGCGGCAACCCAGGTGGAAGAGATTGAAGAAGTGCACTGGA‑CAGAGCTCGGAATGCCGGAGTCACt < 1:209790/295‑1 (MQ=255) gCGATTTTCCACG‑CTGGCCCCATCGTGCGCAAAAACGGCGACAAATGGGAGATGGTCTCCGTCGGCCCGACAACCAGTATGCGTATGGAAAGTTTTGAACGTGAATTTATTGAGCAGACCGGCGTGAAACTGGTGGTTGGCAAAGGTGGTATGGGGCCGCTGACCGAAGAAGGCTGCCAGAAATTCAAGG‑CGCTACATGTGATTTTCCCGGCAGGCTGCGCGGTGCTGGCGGCCACCCAGGCGGAAGACATTTAAGAAGTGCACTGGA‑CCGAGCTCGGACGGCCGGAGTcgcggt > 2:260188/1‑290 (MQ=255) tttCCACG‑CTGGCCCCATCGTGCGCAAAAACGGCGACAAATGGGAGATGGTCTCCGTCGGCCCGACAACCAGTATGCGTATGGAAAGTTTTGAACGTGAATTTATTGAGCAGACCGGCGTGAAACTGGTGGTTGGCAAAGGTGGTATGGGGCCGCTGACCGAAGAAGGCTGCCAGAAATTCAAGG‑CGCTACATGTGATTTTCCCGGCAGGCTGCGCGGTGCTGGCGGCAACCCAGGTGGAAGAGATTGAAGAAGTGCACTGGA‑CAGAGCCCGGCATGCCGGAGTCACTGTGGGTc > 2:345372/1‑295 (MQ=255) tttCCACG‑CT‑GCCCCATCGTGCGCAAAAACGGCGACAAATGGGAGATGGTCTCCGTCGGCCCGACAACCAGTATGCGTATGGAAAGTTTTGAACGTGAATTTATTGAGCAGACCGGCGTGAAACTGGTGGTTGGCAAAGGTGGTATGGGGCCGCTGACCGAAGAAGGCTGCCAGAAATTCAAGG‑CGCTACATGTGATTTTCCCGGCAGGCTGCGCGGTGCTGGCGGCAACCCAGGTGGAAGAGATTGAAGAAGTGCACTGGA‑CAGAGCTCGGAATGCCGGAGTCACTGTGGGTCt < 2:140218/295‑1 (MQ=255) aCG‑CTGGCCCCATCGTGCGCAAAAACGGCGACAAATGGGAGATGGTCTCCGTCGGCCCGACAACCAGTATGCGTATGGAAAGTTTTGAACGTGAATTTATTGAGCAGACCGGCGTGAAACTGGTGGTTGGCAAAGGTGGTATGGGGCCGCTGACCGAAGAAGGCTGCCAGAAATTCAAGG‑CGCTACATGTGATTTTCCCGGCAGGCTGCGCGGTGCTGGCGGCAACCCAGGTGGAAGAGGTTGGAAAAGTGCACTGGA‑CAGAGCGCGGAAGGGCGCAGCAACGGTggggatggcg > 2:52346/1‑288 (MQ=255) | ATCCGTCAACCATCGGCGTTGCTGTCTCTACCGGCTGCTGGGCGCATCGTCGCGGCACGCTGCTGGTTCATGCCGATCTCACCTTTGAAAATCTGTCTCACACCCGGAGCGCGTTATGAAAAAGATCCTGACAACCCCGATCAAAGCTGAAGATCTGCAAGATATTCGCGTCGGCGATGTGATCTACCTGACCGGTACGCTGGTGACCTGCCGCGACGTTTGTCACCGCCGTTTGATCGAACTGAAACGTCCGATCCCTTACGATCTCAACGGCAAAGCGATTTTCCACG‑CT‑GCCCCATCGTGCGCAAAAACGGCGACAAATGGGAGATGGTCTCCGTCGGCCCGACAACCAGTATGCGTATGGAAAGTTTTGAACGTGAATTTATTGAGCAGACCGGCGTGAAACTGGTGGTTGGCAAAGGTGGTATGGGGCCGCTGACCGAAGAAGGCTGCCAGAAATTCAAGG‑CGCTACATGTGATTTTCCCGGCAGGCTGCGCGGTGCTGGCGGCAACCCAGGTGGAAGAGATTGAAGAAGTGCACTGGA‑CAGAGCTCGGAATGCCGGAGTCACTGTGGGTCTGCCG > NZ_LN832404/3203769‑3204349 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |