| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 811,721 | 0 | T | G | 38.1% | 145.0 / 12.7 | 87 | V67G (GTG→GGG) | bioC | malonyl‑ACP O‑methyltransferase, SAM‑dependent |
| Reads supporting (aligned to +/- strand): ref base T (12/40); new base G (32/0); total (47/40) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.13e-13 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
AAATGCAGGATATCGACCGTCTGCTGGAGGTGCTGCATGGCAACGGTTAATAAACAAGCCATTGCAGCGGCATTTGGTCGGGCAGCCGCACACTATGAGCAACATGCAGATCTACAGCGCCAGAGTGCTGACGCCTTACTGGCAATGCTTCCACAGCGTAAATACACCCACGTACTGGACGCGGGTTGTGGACCTGGCTGG‑ATGAGCCGCCACTGGCGGGAACGTCACGCGCA‑GGTGA‑CGGCCTTAGATCTCTCGCCGCCAATGCTTGTTCAGGCACGCCAGAAGGATGCCGCAGACCATTATCTGGCGGGAGATATCG‑AATCCCTGCCGTTAGCGACTGCGACGTTCGATCTTGCA‑TGGAGCAATCTCGCAGTGCAGTGGTGCGGTAATTTATCCACGGCACTCCGCGAGCTGTATCGGGTGGTGCG‑CCCCAAAGGCGTGGTCGCGTTTACCACGCTG > NC_000913/811486‑811944 | aaaTGCAGGATATCGCCCTTCTGCTGGAGGTGTTGCAGGGCAACGGTAAATAAACAAGCCATTGCAGCGGCATTTGGTCGGGCAGCCGCACACTATGAGCAACATGCAGATCTACAGCGCCAGAGTGCTGACGCCTTACTGGCAATGCTTCCACAGCGTAAATACACCCACGTACTGGACGCGGGTTGTGGACCTGGCTGG‑ATGAGCCGCCACTGGCGGGAACGTCACGCGCA‑GGTGA‑c < 2:769242/239‑1 (MQ=255) aaTGCAGGATATCGACCGTCTGCTGGAGGTGCTGCATGGCAACGGTTAATAAACAAGCCATTGCAGCGGCATTTGGTCGGGCAGCCGCACACTATGAGCAACATGCAGATCTACAGCGCCAGAGTGCTGACGCCTTACTGGCAATGCTTCCACAGCGTAAATACACCCACGTACTGGACGCGGGTTGTGGACCTGGCTGG‑ATGAGCCGCCACTGGCGGGAACGTCACGCGCA‑GGTGA‑c < 1:1989062/238‑1 (MQ=255) gATATCGACCGTCTGCTGGGGGTGCTGCATGGCAACGGTTAATAAACAAGCCATTGCAGCGGCATTTGGTCGGGCAGCCGCACACTATGAGCAACATGCAGATCTACAGCGCCAGAGTGCTGACGCCTTACTGGCAATGCTTCCACAGCGTAAATACCCCCACGTACTGGACGCGGGTTGTGGACCTGGCTGG‑ATGAGCCGCCACTGGCGGGAACGTCACGCGCA‑GGTGA‑c < 1:1012610/231‑1 (MQ=255) atatCGACCGTCTGCTGGAGGTGCTGCATGGCAACGGTTAATAAACAAGCCATTGCAGCGGCATTTGGTCGGGCAGCCGCACACTATGAGCAACATGCAGATCTACAGCGCCAGAGTGCTGACGCCTTACTGGCAATGCTTCCACAGCGTAAATACACCCACGTACTGGACGCGGGTTGTGGACCTGGCTGG‑ATGAGCCGCCACTGGCGGGAACGGCACGCCCC‑GGGGA‑CGGCCCTAGa > 1:665643/1‑239 (MQ=255) cGACCGTCTGCTGGAGGTGCTGCATGGCAACGGTTAATAAACAAGCCATTGCAGCGGCATTTGGTCGGGCAGCCGCACACTATGAGCAACATGCAGATCTACAGCGCCAGAGTGCTGACGCCTTACTGGCAATGCTTCCACAGCGTAAATACACCCACGTACTGGACGCGGGTTGTGGACCTGGCTGG‑ATGAGCCGCCACTGGCGGGAACGCGCCGCGCA‑CGGGG‑CGGGCTTTGagt > 2:1542317/1‑235 (MQ=255) ccGTCTGCTGGAGGTGCTGCATGGCAACGGTTAATAAACAAGCCATTGCAGCGGCATTTGGTCGGGCAGCCGCACACTATGAGCAACATGCAGATCTACAGCGCCAGAGTGCTGACGCCTTACTGGCAATGCTTCCACAGCGTAAATACACCCACGTACTGGACGCGGGTTGTGGACCTGGCTGG‑ATGAGCCGCCACTGGCGGGAACGGCACGCGCA‑GGTGA‑CGGCCTTAGa > 1:803293/1‑232 (MQ=255) gTCTGCTGGAGGTGCTGCATGGCAACGGTTAATAAACAAGCCATTGCAGCGGCATTTGGTCGGGCAGCCGCACACTATGAGCAACATGCAGATCTACAGCGCCAGAGTGCTGACGCCTTACTGGCAATGCTTCCACAGCGTAAATACACCCACGTACTGGACGCGGGTTGTGGACCTGGCTGG‑ATGAGCCGCCACTGGCGGGAACGGCACGGGCC‑GGGGAGGGGCCTTAggcctggtct > 2:1012610/1‑230 (MQ=255) tCTGCTGGAGGTGCTGCATGGCAACGGTTAATAAACAAGCCATTGCAGCGGCATTTGGTCGGGCAGCCGCACACTATGAGCAACATGCAGATCTACAGCGCCAGAGTGCTGACGCCTTACTGGCAATGCTTCCACAGCGTAAATACACCCACGTACTGGACGCGGGTTGTGGACCTGGCTGG‑ATGAGCCGCCACTGGCGGGAACGTCACGCGCA‑GGCGA‑CGGCCCTAGATCTCTcgcc > 1:1013664/1‑238 (MQ=255) gctgGAGGTGCTGCATGGCAACGGTTAATAAACAAGCCATTGCAGCGGCATTTGGTCGGGCAGCCGCACACTATGAGCAACATGCAGATCTACAGCGCCAGAGTGCTGACGCCTTACTGGCAATGCTTCCACAGCGTAAATACACCCACGTACTGGACGCGGGTTGTGGACCTGGCTGG‑ATGAGCCGCCACTGGCGGGGACGTCACGCGCG‑GGGGA‑CGGGCCTAGATCTCTCccctccc > 2:729128/1‑238 (MQ=255) gAGGTGCTGCATGGCAACGGTTAATAAACAAGCCATTGCAGCGGCATTTGGTCGGGCAGCCGCACACTATGAGCAACATGCAGATCTACAGCGCCAGAGTGCTGACGCCTTACTGGCAATGCTTCCACAGCGTAAATACACCCACGTACTGGACGCGGGTTGTGGACCTGGCTGG‑ATGAGCCGCCACTGGCGGGAACGTCACGCGCC‑GGGGA‑CGGCCCTAGCTCCCTCTCCCCCCAt > 1:160122/1‑237 (MQ=255) gTGCTGCATGGCAACGGTTAATAAACAAGCCATTGCAGCGGCATTTGGTCGGGCAGCCGCACACTATGAGCAACATGCAGATCTACAGCGCCAGAGTGCTGACGCCTTACTGGCAATGCTTCCACAGCGTAAATACACCCACGTACTGGACGCGGGTTGTGGACCTGGCTGG‑ATGAGCCGCCACTGGCGGGAAAGGCACGCGCA‑GGGGA‑CGGGCCTAGATCTCCCgccgcccaag > 1:2329420/1‑231 (MQ=255) gctgcATGGCAACGGTTAATAAACAAGCCATTGCAGCGGCATTTGGTCGGGCAGCCGCACACTATGAGCAACATGCAGATCTACAGCGCCAGAGTGCTGACGCCTTACTGGCAATGCTTCCACAGCGTAAATACACCCACGTACTGGACGCGGGTTGTGGACCTGGCTGG‑ATGAGCCGCCACTGGCGGGAACGTCCCGCGCA‑GGTGA‑CGGCCTTAGATCTCTCGCCGCCAAAGGTTGt > 1:1564414/1‑238 (MQ=255) tggacaggggTAAAAAAAAAAGCCGTTGCGGGGGCGTTGGTGCGGGCGGCCGCCCACTATGGGAAAAATGCAAAGCAAAAGCGCCAGAGTGTTGGCGCCTTACTGGAATTGCTTCCACGGCGTAAACACCCCCACGTACGGGCCGCGGGTTGTGAACAGGGGTGG‑AGGCGCCGCCACGGGCGGGAAGGTCACCCGCA‑GGTGA‑CGGGCTTAGATCTCTCGCCGCCAATGCTTGTTCAgg < 2:1076270/230‑1 (MQ=255) tgccAACGTTTAAAAACCAAGCCATTGCAGCGGCATTTGGTCGGGCAGCCGCACACTATGAGCAACATGCAGATCTACAGCGCCAGAGTGCTGACGCCTTACTGGCAATGCTTCCACAGCGTAAATACACCCACGTACTGGACGCGGGTTGTGGACCTGGCTGG‑ATGAGCCGCCACTGGCGGGAACGTCACGCGCA‑GGTGA‑CGGCCTTAGATCTCTCGCCGCCAATGCTTGTTCAGGCa < 1:1542317/236‑1 (MQ=255) gaaaggtttAATAAACAAGCCATGGCAGCGGCATTTGGTCGGGCAGCCGCACACTATGAGCAACATGCCGATCTAAAGCGCCAGAGTGCTGACGCCTTACTGGCAATGCTTCCACAGCGTAAATACACCCACGTCCTGGACGCGGGTTGTGGACCTGGCTGG‑ATGAGCCGCCACTGGCGGGAACGTCACGCGCA‑GGTGA‑CGGCCTTAGATCTCTCGCCGCCAATGCTTGTTCAgg < 2:780006/228‑1 (MQ=255) cGGTTAATAAACAAGCCATTGCAGCGGCATTTGGTCGGGCAGCCGCACACTATGAGCAACATGCAGATCTACAGCGCCAGAGTGCTGACGCCTTACTGGCAATGCTTCCACAGCGTAAATACACCCACGTACTGGACGCGGGTTGTGGACCTGGCTGG‑ATGAGCCGCCACTGGCGGGAACGTCACGCGCA‑GGTGA‑CGGCCTTAGATCTCTCGCCGCCCATGCTTGTTCAGGCACGcccg > 1:1525456/1‑237 (MQ=255) gTTAATAAACAAGCCATTGCAGCGGCATTTGGTCGGGCAGCCGCACACTATGAGCAACATGCAGATCTACAGCGCCAGAGTGCTGACGCCTTACTGGCAATGCTTCCACAGCGTAAATACACCCACGTACTGGACGCGGGTTGTGGACCTGGCTGG‑ATGAGCCGCCACTGGCGGGAACGTCACGCGCA‑GGGGA‑CGGCCCTAGATCTCTCGCCGCCCAAGCTTGTTCAGGCACGCCAGaa > 1:1706170/1‑239 (MQ=255) taaACAAGCCATTGCAGCGGCATTTGGTCGGGCAGCCGCACACTATGAGCAACATGCAGATCTACAGCGCCAGAGTGCTGACGCCTTACTGGCAATGCTTCCACAGCGTAAATACACCCACGTACTGGACGCGGGTTGTGGACCTGGCTGG‑ATGAGCCGCCACTGGCGGGAACGTCACGCGCA‑GGGGA‑CGGCCTTAGATCTCTCGCCGCCCATGCTTGTTCAGGCACGCCCGAAGGAt > 1:2246790/1‑238 (MQ=255) taaACAAGCCATTGCAGCGGCATTTGGTCGGGCAGCCGCACACTATGAGCAACATGCAGATCTACAGCGCCAGAGTGCTGACGCCTTACTGGCAATGCTTCCACAGCGTAAATACACCCACGTACTGGACGCGGGTTGTGGACCTGGCTGG‑ATGAGCCGCCACTGGCGGGAACGGCACGCGCC‑GGGGA‑CGGGCTTAGATCTCTCGCCCCCCAAGCCTGTTCAGGCACGCCCGAAGGATg > 2:568930/1‑239 (MQ=255) aggcaaTTGGAGCGGCATTTGGCCGGGCAGCCGCACCCTAGGAGCAACATGCAGATCTACAGCGCCAGAGTGCTGACGCCTTACTGGCAATGCTTCCACAGCGTAAATACACCCACGTACTGGACGCGGGTTGTGGACCTGGCTGG‑ATGAGCCGCCACTGGCGGGAACGTCACGCGCA‑GGTGA‑CGGCCTTAGATCTCTCGCCGCCAATGCTTGTTCAGGCACGCCAGAAGGATGCCGCa < 2:2246790/234‑1 (MQ=255) cATGGCAGCGGCATTTGGTGGGGAAGCCGCCCACTATGAGCAACATGCAGATCTACAGCGCCAGAGGGCTGACGCCTTACTGGCAATGCTTCCACAGCGTAAATACCCCCACGTACTGGACGGGGGTTGGGGACCTGGCTGG‑ATGAGCCGCCACTGGCGGGAACGTCACGCGCA‑GGTGA‑CGGCCTTAGATCTCTCGCCGCCAATGCTTGTTCAGGCACGCCAGAAGGATGCCGCa < 2:1564414/235‑1 (MQ=255) aaTTGCAGCGGCTTTTGGGCGGGCAGCCGCACCCTATGAGCAACATGTAGTTCTACGGCGCTAGAGTGCTGCCGCCTTACTGGAAATGCTCCCACAGCGTAAATACCCCCACGTACGGGACGCGGGTTGGGGCCCGGGCTGG‑GTGGGCCGCCACTGGCGGGAACGTCACGCGCA‑GGTGA‑CGGCCTTAGATCTCTCGCCGCCAATGCTTGTTCAGGCACGCCAGAAGGATGCCGCAGa < 2:1013664/236‑1 (MQ=255) tGCAGCGGCATTTGGTCGGGCAGCCGCACACTATGAGCAACATGCAGATCTACAGCGCCAGAGTGCTGACGCCTTACTGGCAATGCTTCCACAGCGTAAATACACCCACGTACTGGACGCGGGTTGTGGACCTGGCTGG‑ATGAGCCGCCACTGGCGGGAACGTCACGCGCA‑GGTGA‑CGGCCTTAGATCTCTCGCCGCCAATGCTTGGTCAGGCACGCCAGAAGGATGCCGCAGAc > 1:246358/1‑235 (MQ=255) tGCAGCGGCATTTGGTCGGGCAGCCGCACACTATGAGCAACATGCAGATCTACAGCGCCAGAGTGCTGACGCCTTACTGGCAATGCTTCCACAGCGTAAATACACCCACGTACTGGACGCGGGTTGTGGACCTGGCTGG‑ATGAGCCGCCACTGGCGGGAACGTCACGCGCA‑GGGGA‑CGGCCTTAGATCTCTCGCCCCCAATGCTTGTTCAGGCACCCCCGGACGAAGGCGCCGAACAtt > 1:1717618/1‑239 (MQ=255) tGCAGCGGCATTTGGTCGGGCAGCCGCACACTATGAGCAACATGCAGATCTACAGCGCCAGAGTGCTGACGCCTTACTGGCAATGCTTCCACAGCGTAAATACACCCACGTACTGGACGCGGGTTGTGGACCTGGCTGG‑ATGAGCCGCCACTGGCGGGAACGTCACGCGCA‑GGGGA‑CGGCCCTAGATCTCTCGCCGCCCATGCTTGTTCAGGGCCGCCAGAAGGATGcc > 1:1595970/1‑229 (MQ=255) ggCATTTGGCCGGGAGGCCGCACACTAGGAGCAACATGCAGATCTACAGCGCCAGAGTGCTGACGCTTTACTGGCAATGCTTCCACAGCGTAAATACCCCCACGTACTGGACGCGGGTTGTGGACCTGGCTGG‑ATGAGCCGCCACTGGCGGGAACGTCACGCGCA‑GGTGA‑CGGCCTTAGATCTCTCGCCGCCAATGCTTGTTCAGGCACGCCAGAAGGATGCCGCAGACCATTAt < 2:246358/235‑1 (MQ=255) gCATTTGGTCGGGCAGCCGCACACTATGAGCAACATGCAGATCTACAGCGCCAGAGTGCTGACGCCTTACTGGCAATGCTTCCACAGCGTAAATACACCCACGTACTGGACGCGGGTTGTGGACCTGGCTGG‑ATGAGCCGCCACTGGCGGGAAAGCCACGCCCC‑GGGGA‑CGGCCCTAGATCTCCCCCCGCCCATGCTTGTTCAGGGCCGCCACAAGGATGCCGCCGACCATTAttcggc > 2:739606/1‑234 (MQ=255) cGCACACTATGAGCAACATGCAGATCTACAGCGCCAGAGTGCTGACGCCTTACTGGCAATGCTTCCACAGCGTAAATACACCCACGTACTGGACGCGGGTTGTGGACCTGGCTGG‑ATGAGCCGCCACTGGCGGGAACGTCACGCGCA‑GGTGA‑CGGCCTTAGATCTCTCGCCGCCAATGCTTGTTCAGGCACGCCAGAAgg < 1:2321156/200‑1 (MQ=255) acTATGAGCAACATGCAGATCTACAGCGCCAGAGTGCTGACGCCTTACTGGCAATGCTTCCACAGCGTAAATACACCCACGTACTGGACGCGGGTTGTGGACCTGGCTGG‑ATGAGCCGCCACTGGCGGGAACGTCACGCGCA‑GGTGa < 1:1781230/147‑1 (MQ=255) aGCAACATGCAGATCTACAGCGCCAGAGTGCTGACGCCTTACTGGCAATGCTTCCACAGCGTAAATACACCCACGTACTGGACGCGGGTTGTGGACCTGGCTGG‑ATGAGCCGCCACTGGCGGGAACGTCACGCGCA‑GGTGA‑c < 2:1803044/142‑1 (MQ=255) aGCAACATGCAGATCTACAGCGCCAGAGTGCTGACGCCTTACTGGCAATGCTTCCACAGCGTAAATACACCCACGTACTGGACGCGGGTTGTGGACCTGGCTGG‑ATGAGCCGCCACTGGCGGGAACGTCACGCGCA‑GGTGA‑c > 1:1803044/1‑142 (MQ=255) aCATGCAGATCTACAGCGCCAGAGTGCTGACGCCTTACTGGCAATGCTTCCACAGCGTAAATACACCCACGTACTGGACGCGGGTTGTGGACCTGGCTGG‑ATGAGCCGCCACTGGCGGGAAAGGCACGCGCA‑GGGGA‑CGGCCCTAGa > 2:1781230/1‑147 (MQ=255) aTGCAGATCTACAGCGCCAGAGTGCTGACGCCTTACTGGCAATGCTTCCACAGCGTAAATACACCCACGTACTGGACGCGGGTTGTGGACCTGGCTGG‑ATGAGCCGCCACTGGCGGGGACGTCACGCGCA‑GGTGA‑CGGCCCTAGATCTCTCGCCGCCAATGCTTGTTCAGGCACCCCCGaa > 1:921917/1‑181 (MQ=255) aTGCAGATCTACAGCGCCAGAGTGCTGACGCCTTACTGGCAATGCTTCCACAGCGTAAATACACCCACGTACTGGACGCGGGTTGTGGACCTGGCTGG‑ATGAGCCGCCACTGGCGGGAACGTCACGCGCA‑GGTGa > 1:2366120/1‑135 (MQ=255) aTGCAGATCTACAGCGCCAGAGTGCTGACGCCTTACTGGCAATGCTTCCACAGCGTAAATACACCCACGTACTGGACGCGGGTTGTGGACCTGGCTGG‑ATGAGCCGCCACTGGCGGGAACGTCACGCGCA‑GGTGa < 2:2366120/135‑1 (MQ=255) aGATCTACACCGCCAGAGTGCTGCCGCCTTACTGGCAATGCTCCCACAGCGTAAATACCCCCACGTACTGGACGCGGGTTGTGGACCTGGCTGG‑ATGAGCCGCCACTGGCGGGAACGTCACGCGCA‑GGTGA‑CGGCCTTAGATCTCTCGCCGCCAATGCTTGTTCAgg < 2:1877808/167‑1 (MQ=255) tACAGCGCCAGAGTGCTGACGCCTTACTGGCAATGCTTCCACAGCGTAAATACACCCACGTACTGGACGCGGGTTGTGGACCTGGCTGG‑ATGAGCCGCCACTGGCGGGAACGTCACGCGCA‑GGTGA‑CGGCCTTAGATCTCTCGCCGCCAATGCTTGTTCAgg < 2:897992/162‑1 (MQ=255) tACAGCGCCAGAGTGCTGACGCCTTACTGGCAATGCTTCCACAGCGTAAATACACCCACGTACTGGACGCGGGTTGTGGACCTGGCTGG‑ATGAGCCGCCACTGGCGGGAACGTCACGCGCA‑GGTGA‑CGGCCTTAGATCTCTCGCCGCCAATGCTTGTTCAgg > 1:897992/1‑162 (MQ=255) gcgcCAGAGTGCTGACGCCTTACTGGCAATGCTTCCACAGCGTAAATACACCCACGTACTGGACGCGGGTTGTGGACCTGGCTGG‑ATGAGCCGCCACTGGCGGGAACGGCACGCGCG‑GGGGA‑CGGCCCTAGATCTCCCGCCCCCCATGCCTGTTCCGGCACGCCAGAAGGAAGCCGCAGACCACTATCTGGCGGGGGAGATCG‑GAACCCCGCCCGTCGCGGCCGCGGCGTTCGATCtt > 2:752452/1‑238 (MQ=255) cgcCAGAGTGCTGACGCCTTACTGGCAATGCTTCCACAGCGTAAATACACCCACGTACTGGACGCGGGTTGTGGACCTGGCTGG‑ATGAGCCGCCACTGGCGGGGACGTCACGCGCA‑GGGGG‑CGGCCCTAGATCTCTCGCCGCCCATGCTTGTTCAGGCACGCCCGGAGGGAGCCGCAGACCATTATCTGGCGGGAGGTATCG‑AATTCCCGCCGGTTGCGACTGGGAGGCTCgcgcgtg > 2:814886/1‑232 (MQ=255) cgcCAGAGTGCTGACGCCTTACTGGCAATGCTTCCACAGCGTAAATACACCCACGTACTGGACGCGGGTTGTGGACCTGGCTGG‑ATGAGCCGCCACTGGCGGGAACGTCACGCGCA‑GGGGA‑CGGCCTTAGATCTCTCGCCGCCAATGCTTGTTCAGGCACCCCAGaa > 1:1877808/1‑167 (MQ=255) tGCTGACGCCTTGCGGGCAATGCTTCCACGGCGTAAATCCCCCCACGTACTGGAGGCGGGTTGTGGACCTGGCTGG‑ATGGGCCGCCACTGGCGGGAACGTCACGCGCA‑GGTGA‑CGGCCTTAGATCTCTCGCCGCCAATGCTTGTTCAgg < 1:2317662/149‑1 (MQ=255) tGCTGACGCCTTACTGGCAATGCTCCCACACCGTAAATACACCCACGTCCTGGACGCGGGTTGTGGCCCTGGCTGG‑ATGAGCCGCCACTGGCGGGAACGTCACGCGCA‑GGTGA‑CGGCCTTAGATCTCTcg < 2:1791994/130‑1 (MQ=255) ttACTGGCAATGCTTCCACAGCGTAAATACACCCACGTACTGGACGCGGGTTGTGGACCTGGCTGG‑ATGAGCCGCCACTGGCGGGGAAGTCCCGCGCA‑GGGGG‑CGGCCTTTGAATTCTCGCCGCCAATgg > 1:1791994/1‑129 (MQ=255) gCAATGCTTCCACAGCGTAAATACCCCCACGTACGGGACGCGGGTTGTGGCCCTGGCTGG‑ATGAGCCGCCACTGGCGGGAACGTCCCGCGCA‑GGTGA‑CGGCCTTAGAtctct < 1:1397199/112‑1 (MQ=255) aTGCTTCCACAGCGTAAATACACCCACGTACTGGACGCGGGTTGTGGACCTGGCTGG‑ATGAGCCGCCACTGGCGGGAACGTCACGCGCA‑GGTGa < 1:1969112/94‑1 (MQ=255) aTGCTTCCACAGCGTAAATACACCCACGTACTGGACGCGGGTTGTGGACCTGGCTGG‑ATGAGCCGCCACTGGCGGGAACGTCACGCGCA‑GGGGa > 2:1969112/1‑94 (MQ=255) cacgGCATAAATCCCCCCACGTCCTGGACGCGGGTTGTGGACCTGGCTGG‑ATGAGCCGCCACTGGCGGGAACGTCACGCGCA‑GGTGA‑CGGCCTTAGATCTCTCGCCGCCAATGCTTGTTCAGGCACGCCAGAAGGATGCCGCAGACCATTATCTGGCGGGAGATATCG‑AATCCCTGCCGTTAGCGACTGCGACGTTCGATCTTGCA‑TGGAGCAATCTCGCAGTGCAGTGGTGCGGTAAt < 1:2092897/239‑1 (MQ=255) cacaGCGTAAATACACCCACGTACTGGACGCGGGTTGTGGACCTGGCTGG‑ATGAGCCGCCACTGGCGGGAACGGCCCCCGCA‑GGAGA‑CGGGCTTAGATCTCCCGCCGCCaaa > 2:1397199/1‑111 (MQ=255) cGTAAATACACCCACGTACTGGACGCGGGTTGTGGACCTGGCTGG‑ATGAGCCGCCACTGGCGGGAACGTCACGCGCA‑GGTGA‑CGGCCTTAGATCTCTCGCCGCCAATGCTTGTTCAGGCACGCCAGAAGGATGCCGCAGACCATTa < 1:384525/146‑1 (MQ=255) gTAAATACACCCACGTACTGGACGCGGGTTGTGGACCTGGCTGG‑ATGAGCCCCCACTGGCGGGGACGGTACCGGGT‑GGCGA‑CGGCCTTAGATCTCCCGCCGCCAATg > 1:167335/1‑107 (MQ=255) tAAATACACCCACGTACTGGACGCGGGTTGTGGACCTGGCTGG‑ATGAGCCGCCACTGGCGGGAACGTCACGCGGA‑GGGGG‑AGGCCCTAGATCTCTCCCCGCCCATGCTTGTTCAGGCACGCCAGAAGGATGCCGCAGACCAGTAGCTGGCGGGAGATATTG‑AATCCCCGCCGTTAGCGACCGCGACGTTCGATCTTGCA‑TGGGGCGATCCTGCAATGCCGCGGTGCGGGAATTTAtac > 2:1144300/1‑236 (MQ=255) cccACGTACTGGACGCGGGTTGTGGACCTGGCTGG‑ATGAGCCGCCACTGGCGGGGAACTCACGCGCC‑GGGGA‑CGGCCTTAGATCTCTCGCCGCCCAAGCTTGTTCAGGCACGCCCGAAGGATGGCCCAGACCATTATCTCGCGGGGGATATAGCAACCCCGCCCCTTGGGCACTCGGAC‑TTCTATCTTTCC‑TGGAGGCATCTCTCAGTGCAGTGGGGGGGGAATTTATCTCCGGCACt > 2:1624898/1‑238 (MQ=255) cccACGTACTGGACGCGGGTTGTGGACCTGGCTGG‑ATGAGCCGCCACTGGCGGGAACGTCACGCGCA‑GGGGA‑CGGCCTTAGATCTCTCCCCCCCCAAGCTTGTTCAGGCCCGCCCGAAGGATGCCGCCGACCATTATCTGGCGGGGGATATCG‑AATCCCTGCCGTTAGCGAATGCGACGGTCGATCTTGCA‑TGGAGCAATCTCGCCGTGGCGGGGGGGGGGAATTTATTCACCGCACt > 2:2044895/1‑238 (MQ=255) cccACGTACTGGACGCGGGTTGTGGACCTGGCTGG‑ATGAGCCGCCACTGGCGGGAACGGCACGCGCA‑GGGGA‑CGGGCTTAGGTCTCTCGCCGCCAATGCTTGTTCCGGCCCGCCAGAAGGATGGCGCCGACCCCTATCTGGGGGGGGGTATCG‑GATCCCCGCCCGTTGCGACTGCGACGTTCGGACTTGGA‑TGGGGCAATCTCGCAGGGGAGGGGGGGGGGCAATTATCCACgggccc > 2:904097/1‑234 (MQ=255) cccACGTACTGGACGCGGGTTGTGGACCTGGCTGG‑ATGAGCCGCCACTGGCGGGAACGGCACCCGCA‑GGGGG‑CGGCCCTTGATCTCTCGCCGCCCATGCTTGTTTAGGCCCGCCCGGAGGATGCCGCAGACCATTTTCTTGCcggg > 2:384525/1‑145 (MQ=255) cccACGTACTGGACGCGGGTTGTGGACCTGGCTGG‑ATGAGCCGCCACTGGCGGGAAAGGCACGCGCA‑GGGGA‑CGGCCTTAGATCTCTCGCCGCCAAAGCCTGTTTAGGCACGCCCGAAGGATGCCGCAGACCCTTATCTGGGGGGGGATATCG‑AAACCCCGCCCTTAGCGGCTGCGCCGTTTGGTCTTGGATTGGGGCAA‑CTCCCCGTGGCGGGGGGCGGGGATTTATccccagccac > 2:1186114/1‑230 (MQ=255) cGTACTGGACGCGGGTTGTGGACCTGGCTGG‑ATGAGCCGCCACTGGCGGGAACGTCACGCGCA‑GGGGA‑ACGCCTTAGAACTCTCGCCGCCCATCCTTGTTCAGGCACGCCCGAAGGAAGCCGCAGACCATTATCTGGCGGGGGATATCG‑CAACCCTGCCCTTTGCGACAGCGACGTTCGATCTTGCA‑TTGGGCAAACCCACAGTGCAGGGGGGCGGGGATTTATTCACGGCACTCcgcc > 2:570150/1‑238 (MQ=255) tgtggggggggggTGTGGGCCTGGGTGGTAGGGCCCGCCACGGGCGGGAACGTCCCGCGCA‑GGTGA‑CGGCCTTAGACCCCCCGCCGCCAATGCTTGTTCAGGCACGCCAGAAGGATGCCGCAGCCCATTATCTGGCGGGAGATATCG‑AATCCCTGCCGTTAGCGACTGCGACGTTCGATCTTGCA‑TGGAGCAATCTCGCAGTGCAGTGGTGCGGTAATTTATCCACGGCACTCcg < 2:412802/226‑1 (MQ=255) gcTGGACGCGGTTTGTGGCCCGGGCTGG‑ATGAGCCGCCACTGGCGGGACCGTCACGCGCA‑GGTGA‑GGGCCTTAGATCTCTCGCCGCCAATGCTTGTTCAGGCCCGCCAGAAGGATGCCGCAGACCATTATCTGGCGGGAGATATCG‑AATCCCTGCCGTTAGCGACTGCGACGTTCGATCTTGCA‑TGGAGCAATCTCGCAGTGCAGTGGTGCGGTAATTTATCCACGGCACTCCGCGAg < 1:904097/237‑1 (MQ=255) agcggggggggggTGGGGCCCTGGGTGGTATGAGCCGCCGTGGGCGGGAGCGTCCCGCGCG‑GGTGC‑GGGCTTAAGTTCCTTCGCCGCCAATGCTTGTTCAGGCACGCCAGAAGGATGCCGCAGCCCATTATCTGGCGGGAGATGTCG‑AATCCCTGCCGTTAGCGACTGCGACGTTCGATCTTGCA‑TGGAGCAATCTCGCAGTGCAGTGGTGCGGTAATTTATCCACGGCACTCCGCGAg < 2:1742823/230‑1 (MQ=255) acgggACGGGGGTTGGGGACCGGGCTGG‑ATGGGCCGCCACTGGCGGGAACGTCACGCGCA‑GGTGA‑CGGCCTTAGATCTCTCGCCGCCAATGCTTGTTCAGGCCCGCCAGAAGGATGCCGCAGACCATTATCTGGCGGGAGATATCG‑AATCCCTGCCGTTAGCGACTGCGACGTTCGATCTTGCA‑TGGAGCAATCTCGCAGTGCAGTGGTGCGGTAATTTATCCACGGCACTCCGCGAg < 1:752452/235‑1 (MQ=255) cggggcgcgGGTTGTGGCCCTGGGGGG‑ATGGGCCGCCACTGGCGGGAACGTCACGCGCA‑GGTGA‑CGGCTTTAGATCTCTCGCCGCCAATGCTTGTTCAGGCACGCCAGAAGGATGCCGCAGACCATTATCTGGCGGGAGATATCG‑AATCCCTGCCGTTAGCGACTGCGACGTTCGATCTTGCA‑TGGAGCAATCTCGCAGTGCAGTGGTGCGGTAATTTATCCACGGCACTCCGCGAGCt < 1:729128/234‑1 (MQ=255) gccgcgGGTTGTGGACCTGGCTGG‑ATGAGCCGCCACTGGCGGGAACGTCACGCGCA‑GGTGa < 1:2363762/59‑1 (MQ=255) gACGCGGGTTGTGGACCTGGCTGG‑ATGAGCCGCCACTGGCGGGAACGTCACGCGCC‑GGGGA‑CGGCCCTAGATCTCTCCCCCCCCATGCTTGTTTAGGCACGCCAGAAGGATGCCGCAGACCATTATCTGGCGGGAGAGATCG‑AATCCCTCCCGTTAGCGGCCGCGACGTTCGATCTTGCA‑TGGGGCAATCTCGCCGTGCAGTGGTGCGGGAATTTATCCACCGCCCCCCGCGa > 2:277697/1‑233 (MQ=255) gACGCGGGTTGTGGACCTGGCTGG‑ATGAGCCGCCACTGGCGGGAACGGCCCGCGCC‑GGGGA‑CCGCCCTTGATCTCTCGCCGCCCATGCTTGTTTAGGCACGCCCCAAGGAGGCCCCAGACCCTTATTTGGCGGGGGAGATCA‑AAACCCCCCCGCTAGCGCCTGCGCCGTTTGACCTTTCA‑TTGGGCAATCTCGCGGTGCAGTGGGGCGGGGATTTATCCACCGCACTCCCCGAGCCGt > 2:2070945/1‑238 (MQ=255) gACGCGGGTTGGGGCCCTGGCTGG‑AGGGGCCGCCACTGGCGGGAACGTCACGCGCA‑GGTGA‑CGGCCTTAGATCTCTCGCCGCCAATGCTTGTTCAGGCACGCCAGAAGGATGCCGCAGACCATTATCGGGCGGGAGATATCG‑AATCCCTGCCGTTAGCGACTGCGACGTTCGATCTTGCA‑TGGAGCAATCTCGCAGTGCAGTGGTGCGGTAATTTATCCACGGCACTCCGCGAGCTGt < 1:653371/238‑1 (MQ=255) gggTTGTGGACCTGGCTGG‑ATGGGCCGCCACTGGCGGGAACGTCACGCGCA‑GGTGA‑CGGCCTTAGATCTCTCGCCGCCAATGCTTGTTCAGGCACGCCAGAAGGa < 1:900128/105‑1 (MQ=255) gtgGACCTGGCTGG‑ATGAGCCGCCACTGGCGGGAACCTCCCCCGCA‑GGTGA‑CGGCCCTaaa > 2:2363762/1‑59 (MQ=255) ggggcccgggctgg‑AGGGCCGGCCCCGGGCGGGACCGGCACGCGCA‑GGTGA‑CGGCCTTAGATCTCTCGCCGCCAATGCTTGTTCAGGCACGCCAGAAGGATGCCGCAGACCATTATCTGGCGGGAGATATCG‑AATCCCTGCCGTTAGCGACTGCGACGTTCGATCTTGCA‑TGGAGCAATCTCGCAGTGCAGTGGTGCGGTAATTTATCCACGGCACTCCGCGAGCTGTATCGGgtggtg < 1:1385080/231‑1 (MQ=255) ggggACCGGGTGGG‑ATGGGCCGCCACTGGCGGGAACGTCACGCGCA‑GGTGA‑CGGCCTTAGATCTCTCGCCGCCAATGCTTGTTCAGGCACGCCAGAAGGATGCCGCAGACCATTATCTGGCGGGAGATATCG‑AATCCCTGCCGTTAGCGACTGCGACGTTCGATCTTGCA‑TGGAGCAATCTCGCAGTGCAGTGGTGCGGTAATTTATCCACGGCACTCCGCGAGCTGTATCGGgtggtg < 1:2272655/237‑1 (MQ=255) tgGACCTGGCTGG‑ATGAGCCGCCACTGGCGGGAACGTCACGCGCA‑GGTGA‑CGGCCTTAGATCTCTCGCCGCCAATGCTTGTTCAGGCACGCCAGAAGGATGCCGCAGACCATTATCTgg < 1:176764/119‑1 (MQ=255) gcccgggctgg‑ATGAGCCGCCACTGGCGGGAACGTCACGCGCA‑GGTGA‑CGGCCTTAGATCTCTCGCCGCCAATGCTTGTTCAGGCACGCCAGAAGGATGCCGCAGACCATTATCTGGCGGGAGATATCG‑AATCCCTGCCGTTAGCGACTGCGACGTTCGATCTTGCA‑TGGAGCAATCTCGCAGTGCAGTGGTGCGGTAATTTATCCACGGCACTCCGCGAGCTGTATCGGGTGGTgcg < 1:2104895/233‑1 (MQ=255) ccTGGCTGG‑ATGAGCCGCCACTGGCGGGAACATCACGCGCA‑GGTGG‑CGGCCTTTGATCTCTCGCCGCCAATGCCTGTTCACGCCCGCCAGAAGGAGGCCGCAGAc > 2:900128/1‑105 (MQ=255) tggctgg‑ATGAGCCGCCACTGGCGGGGACGGCACGCGCA‑GGTGG‑CGGCCTTTGATCTCTCGCCGCCAATGCTTGTTTAGGGACGCCCGAAGGATGCCGCCGACCCTTATCTGGCGGGGGGTATTG‑AATCCCTGCCGTTAGCGGACGCGACGGTTGATCTTGCA‑TGGAGGAATCTCgcagtg > 2:1136546/1‑181 (MQ=255) gcggg‑ATGGGCCGCCACTGGCGGGAACGTCCCGCGCA‑GGTGA‑CGGCCTTAGATCTCTCGCCGCCAATGCTTGTTCAGGCACGCCAGAAGGAGGCCGCAGACCATTATCTGGCGGGAGATATCG‑AATCCCTGCCGTTAGCGACTGCGACGTTCGATCTTGCA‑TGGAGCaa < 1:1527265/166‑1 (MQ=255) ctgg‑ATGAGCCGCCACTGGCGGGAACGTCACGCGCA‑GGTGA‑CGGCCTTAGATCTCTCGCCGCCAATGCTTGTTCAGGCACGCCAGAAGGATGCCGCa < 1:170790/97‑1 (MQ=255) tgg‑ATGAGCCGCCACTGGCGGGGACCTCCCCCGCAGGGGGA‑CGCCCTT‑GATCCCTCCCCGCCCACACTTGTTTCGGCACGCCCGAAGGATTCCGCCGACCACTATCTTGCGGGGGatat > 2:176764/1‑119 (MQ=255) gaggggccgccACTGGCGGGAACGTCACGCGCA‑GGTGA‑CGGCCTTAGATCTCTCGCCGCCAATGCTTGTTCAGGCACGCCAGAAGGATGCCGCAGACCATTATCTGGCGGGAGATATCG‑AATCCCTGCCGTTAGCGACTGCGACGTTCGATCTTGCA‑TGGAGCAAtc < 1:1993422/162‑1 (MQ=255) aTGAGCCGCCACTGGCGGGAACGGCACCCGCA‑GGGGA‑CGGCCCTTGATCTCTCCCCGCCCATGCTTGTTCAGGCCCGCCAGAAGGATGCCGCAGACCATTATTTGGCGGGGGATATCG‑AATCCCCGCCGGTAGCGACCGCGACCGTTGGTCTTTCA‑TGGAGCGATCTCCCCGGGCAGGGGGGCGGGAATTTATTCACGGCACCCCGCGCGCTGTATCGGGGGGGGCG‑CCCCACAggg > 2:2104895/1‑236 (MQ=255) gccgccACTGGCGGGAACGTCACGCGCA‑GGGGA‑CGGCCTTAGATCTCTCGCCCCCCATGCTTGTTCAGGCACGCCCGAAGGATGCCGCCGACCCTTATCTGGCGGGGGATATCC‑AATTCCTGCCGGTTGCGACTGCGACGGTCGATCTTTCA‑TGGAGGCATCTCGCAGGGCCGTGGGGCGGGAATTTTTCCACGGGCCCCCCCCAGCTTGATCGGGGGGGGGGCCCCCAAAGGGGTggc > 2:1399266/1‑238 (MQ=255) ccgccACTGGCGGGAACGTCACGCGCC‑GGGGA‑CGGCCTTAGATCTCTCGCCGCCGACGCTTGTTCAGGCACGCCCGGAGGTTGCCCCCGACCCTTATTTGGCGGGAGATATAG‑AATTCCCGCCCGTGGCGGCTGCGACGTTCGATCTTTCA‑CGGGGCAATCTCgcaggg > 2:1527265/1‑167 (MQ=255) cACTGGCGGGAACCTCACGCGCA‑GGGGA‑CGGCCTTAGATCTCTCGCCGCCCAAGCTTGTTTAGGCACGCCCGAAGGATGCCGCCGACCCTTATCCGGCGGGGGATATCG‑AATCCCTGCCGTTTGCGACCGCGACGTTCGATCTTGCA‑TGGAGGAAACCCgcagtgcag > 2:1993422/1‑168 (MQ=255) gggcggcAGCGGCGCGCGAA‑GGTGC‑CGGCCTTAGCTCTCTCGCCGCCAATGCTTGTTCAGGCACGCCAGAAGGATGCCGCAGACCATTATCTGGCGGGAGATATCG‑AATCCCTGCCGTTAGCGACTGCGACGTTCGATCTTGCA‑TGGAGCAATCTCGCAGTGCAGTGGTGCGGTAATTTATCCACGGCACTCCGCGAGCTGTATCGGGTGGTGCG‑CCCCAAAGGCGTGGTCGCGTTTAc < 2:651513/238‑1 (MQ=255) aCGTCACGCGCA‑GGTGC‑CGGCTTTAGATCTCCCGCCGCCAATGCTTGTTCAGGCACGCCAGAAGGATGCCGCAGACCATTATCTGGCGGGAGATATCG‑AATCCCTGCCGTTAGCGACTGCGACGTTCGATCTTGCA‑TGGAGCAATCTCGCAGTGCAGTGGTGCGGTAATTTATCCACGGCACTCCGCGAGCTGTATCGGGTGGTGCG‑CCCCAAAGGCGTGGTCGCGTTTACCACGCTg < 1:814886/238‑1 (MQ=255) gTCACGCGCA‑GGTGA‑CGGCCTTAGATCTCTCGCCGCCAATGCTTGTTCAGGCACGCCAGAAGGATGCCGCAGACCATTATCTGGCGGGAGATATCG‑AATCCCTGCCGTTAGCGACTGCGACGTTCGATCTTGCA‑TGGAGCAATCTCGCAGTGCAGTGGTGCGGTAATTTATCCACGGCACTCCGCGAGCTGTa > 1:1228772/1‑193 (MQ=255) a‑GGTGA‑CGGCTTTAGATCTCTCGCCGCCAATGCTTGTTCAGGc < 1:237461/43‑1 (MQ=255) | AAATGCAGGATATCGACCGTCTGCTGGAGGTGCTGCATGGCAACGGTTAATAAACAAGCCATTGCAGCGGCATTTGGTCGGGCAGCCGCACACTATGAGCAACATGCAGATCTACAGCGCCAGAGTGCTGACGCCTTACTGGCAATGCTTCCACAGCGTAAATACACCCACGTACTGGACGCGGGTTGTGGACCTGGCTGG‑ATGAGCCGCCACTGGCGGGAACGTCACGCGCA‑GGTGA‑CGGCCTTAGATCTCTCGCCGCCAATGCTTGTTCAGGCACGCCAGAAGGATGCCGCAGACCATTATCTGGCGGGAGATATCG‑AATCCCTGCCGTTAGCGACTGCGACGTTCGATCTTGCA‑TGGAGCAATCTCGCAGTGCAGTGGTGCGGTAATTTATCCACGGCACTCCGCGAGCTGTATCGGGTGGTGCG‑CCCCAAAGGCGTGGTCGCGTTTACCACGCTG > NC_000913/811486‑811944 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 6 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |