New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 22874488 (0.400)65 (0.310) 18/184 19.6 44.0% intergenic (+82/‑12) rrlH/rrfH 23S ribosomal RNA of rrnH operon/5S ribosomal RNA of rrnH operon
?NC_000913 2726224 = NA (NA)intergenic (‑36/+57) rrfG/rrlG 5S ribosomal RNA of rrnG operon/23S ribosomal RNA of rrnG operon
Rejected: Coverage evenness skew score above cutoff.

Only 100 of 151 total aligned reads displayed.

ATGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/228641‑228744
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tctgatTTAATCTGTATCAGGCTGAAAATCTTCTCTC‑A‑TCCGCCAAAACAGCTTCGGCGTTGTAAGGTTAAGCCTCACGGTTCATTAGTACCGGTTAGCTCAAC  >  NC_000913/2726224‑2726321
                                                                                                                                                                                                            
ATGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGACCGCAGAAGCGGT                                                                                                           >  1:2930156/1‑99
ATGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGT                                                                                                           >  1:2953968/1‑99
ATGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGT                                                                                                           >  2:2406888/1‑99
 TGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTC                                                                                                          >  1:2562384/1‑99
 TGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTC                                                                                                          >  1:5513051/1‑99
 TGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTC                                                                                                          <  2:4729328/99‑1
 TGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTC                                                                                                          >  1:1514194/1‑99
 TGAACCGCGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTC                                                                                                          <  1:1505912/99‑1
  GAACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCT                                                                                                         <  1:1029315/99‑1
  GAACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCT                                                                                                         <  1:1198609/99‑1
  GAACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCT                                                                                                         <  2:5484870/99‑1
   AACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTG                                                                                                        >  1:4134493/1‑99
    ACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGA                                                                                                       >  1:1674752/1‑99
     CCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGAT                                                                                                      <  1:4485307/99‑1
     CCGTGAGGCATAACCTTACAACGCCGAGGTTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACACATTATATCAGAACGCAGAATCGGTCTGAT                                                                                                      <  2:3044816/99‑1
                                                              CAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTCAA‑TCCGCCAAAACAGCTTCGGCGTTG                                            >  2:5101147/1‑99
                                                                    GATACAGATTAAATCAGAACGCAGAAGCGGTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTCAA‑TCCGCCAAAACACCTTCGGCGTTGTAAGGT                                      >  2:3750989/1‑99
                                                                     ATACAGATTAAATCAGAACGCAGAAGCGGTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTCAA‑TCCGCCAAAACAGCTTCGGCGTTGTAAGGTT                                     >  1:1081680/1‑99
                                                                         AGATTAAATCAGAACGCAGAAGCGGTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTCAA‑TCCGCCAAAACACCTTCGGCGTTGTAAGGTTAAGC                                 >  1:4740835/1‑99
                                                                         AGATTAAATCAGAACGCAGAAGCGGTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTC‑A‑TCCGCCAAAACAGCTTCGGCGTTGTAAGGTTAAGCC                                >  2:2845048/1‑99
                                                                          GATTAAATCAGAACGCAGAAGCGGTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTCAA‑TCCGCCAAAACACCTTCGGCGTTGTAAGGTTAAGCC                                >  2:400117/1‑99
                                                                          GATTAAATCAGAACGCAGAAGCGGTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTCAA‑TCCGCCAAAACACCTTCGGCGTTGTAAGGTTAAGCC                                >  2:586642/1‑99
                                                                          GATTAAATCAGAACGCAGAAGCGGTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTCAA‑TCCGCCAAAACACCTTCGGCGTTGTAAGGTTAAGCC                                >  1:5234037/1‑99
                                                                          GATTAAATCAGAACGCAGAAGCGGTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTC‑A‑TCCGCCAAAACAGCTTCGGCGTTGTAAGGTTAAGCCT                               >  2:2137568/1‑99
                                                                          GATTAAATCAGAACGCAGAAGCGGTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTC‑A‑TCCGCCAAAACAGCTTCGGCGTTGTAAGGTTAAGCCT                               >  1:5419970/1‑99
                                                                          GATTAAATCAGAACGCAGAAGCGGTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTC‑A‑TCCGCCAAAACAGCTTCGGCGTTGTAAGGTTAAGCCT                               >  2:3491600/1‑99
                                                                           ATTAAATCAGAACGCAGAAGCGGTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTCAA‑TCCGCCAAAACAGCTTCGGCGTTGTAAGGTTAAGCCT                               >  1:5465739/1‑99
                                                                           ATTAAATCAGAACGCAGAAGCGGTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTCAA‑TCCGCCAAAACACCTTCGGCGTTGTAAGGTTAAGCCT                               >  1:1406254/1‑99
                                                                           ATTAAATCAGAACGCAGAAGCGGTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTCAA‑TCCGCCAAAACACCTTCGGCGTTGTAAGGTTAAGCCT                               >  2:2644606/1‑99
                                                                           ATTAAATCAGAACGCAGAAGCGGTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTCAA‑TCCGCCAAAACACCTTC‑GCCTTGTAAGGGTAAACCcc                              >  2:4384950/1‑97
                                                                           ATTAAATCAGAACGCAGAAGCGGTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTC‑A‑TCCGCCAAAACAGCTCCGGCGTTGTAAGGTTAAGCCTC                              >  2:4995557/1‑99
                                                                            TTAAATCAGAACGCAGAAGCGGTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTCAA‑TCCGCCAAAACACCTTCGGCGTTGTAAGGTTAAGCCTC                              >  1:2311602/1‑99
                                                                             TAAATCAGAACGCAGAAGCGGTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTC‑A‑TCCGCCAAAACATCTTCGGCGTTGTAAGGTTAAGCCTCAC                            >  1:5432518/1‑99
                                                                               AATCAGAACGCAGAAGCGGTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTCAA‑TCCGCCAAAACAGCTTCGGCGTTGTAAGGTTAAGCCTCACG                           >  1:4452321/1‑99
                                                                               AATCAGAACGCAGAAGCGGTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTCAA‑TCCGCCAAAACAGCTTCGGCGTTGTAAGGTTAAGCCTCACG                           >  1:2319944/1‑99
                                                                               AATCAGAACGCAGAAGCGGTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTC‑A‑TCCGCCAAAACATCTTCGGCGTTGTAAGGTTAAGCCTCACGG                          >  1:1205568/1‑99
                                                                               AATCAGAACGCAGAAGCGGTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTC‑A‑TCCGCCAAAACAGCTTCGGCGTTGTAAGGTTAAGCCTCACGG                          >  1:1457644/1‑99
                                                                               AATCAGAACGCAGAAGCGGTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTC‑A‑TCCGCCAAAACAGCTTCGGCGTTGTAAGGTTAAGCCTCACGG                          >  2:2388476/1‑99
                                                                               AATCAGAACGCAGAAGCGGTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTC‑A‑TCCGCCAAAACAGCTTCGGCGTTGTAAGGTTAAGCCTCACGG                          >  2:1069021/1‑99
                                                                                ATCCGAACGCAGAAGCGTTCTGATTTAACCTGTATCAGGCTGAAGATCTTCTCTC‑A‑TCCGCCAAAACAGCTTCGGCGTTTTAAGCTTAAGCCTAACTGT                         >  2:1723851/1‑99
                                                                                ATCAGAACGCAGAAGCGGTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTCAA‑TCCGCCAAAACACCTTCGGCGTTGTAAGGTTAAGCCTCACGG                          >  1:3774567/1‑99
                                                                                ATCAGAACGCAGAAGCGGTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTCAA‑TCCGCCAAAACACCTTCGGCGTTGTAAGGTTAAGCCTCACGG                          >  2:5336399/1‑99
                                                                                ATCAGAACGCAGAAGCGGTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTCAA‑TCCGCCAAAACACCTTCGGCGTTGTAAGGTTAAGCCTCACGG                          >  2:488549/1‑99
                                                                                ATCAGAACGCAGAAGCGGTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTCAA‑TCCGCCAAAACACCTTCGGCGTTGTAAGGTTAAGCCTCACGG                          >  2:4388982/1‑99
                                                                                ATCAGAACGCAGAAGCGGTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTCAA‑TCCGCCAAAACACCTTCGGCGTTGTAAGGTTAAGCCTCACGG                          >  2:3621988/1‑99
                                                                                ATCAGAACGCAGAAGCGGTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTC‑ACTCCGCCAAAACACCTTCGGCGTTGTAAGGTTAAGCCTCACGG                          >  1:101670/1‑99
                                                                                ATCAGAACGCAGAAGCGGTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTC‑A‑TCCGCCAAAACGGCTTCGGCGTTGTAAGGTTAAGCCTCACGGT                         >  1:1952764/1‑99
                                                                                ATCAGAACGCAGAAGCGGTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTC‑A‑TCCGCCAAAACATCTTCGGCGTTGTAAGGTTAAGCCTCACGGT                         >  1:1338339/1‑99
                                                                                ATCAGAACGCAGAAGCGGTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTC‑A‑TCCGCCAAAACATCTTCGGCGTTGTAAGGTTAAGCCTCACGGT                         >  1:250967/1‑99
                                                                                ATCAGAACGCAGAAGCGGTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTC‑A‑TCCGCCAAAACAGCTTCGGCGTTGTAAGGTTAAGCCTCACGGT                         >  2:2625604/1‑99
                                                                                ATCAGAACGCAGAAGCGGTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTC‑A‑TCCGCCAAAACAGCTTCGGCGTTGTAAGGTTAAGCCTCACGGT                         >  2:1229454/1‑99
                                                                                 TCAGAACGCAGAAGCGGTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTCAA‑TCCGCCAAAACAGCTTCGGCGTTGTAAGGTTAAGCCTCACGGT                         >  1:535967/1‑99
                                                                                 TCAGAACGCAGAAGCGGTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTCAA‑TCCGCCAAAACACCTTCGGCGTTGTAAGGTTAAGCCTCACGGT                         >  1:1922233/1‑99
                                                                                   AGAACGCAGAAGCGGTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTC‑A‑TCCGCCAAAACAGCTTCGGCGTTGTAAGGTTAAGCCTCACGGTTCA                      >  2:28209/1‑99
                                                                                    GAACGCAGAAGCGGTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTCAA‑TCCGCCAAAACACCTTCGGCGTTGTAAGGTTAAGCCTCACGGTTCA                      <  1:251862/99‑1
                                                                                     AACGCAGAAGCGGTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTCAA‑TCCGCCAAAACACCTTCGGCGTTGTAAGGTTAAGCCTCACGGTTCAT                     >  1:4022678/1‑99
                                                                                     AACGCAGAAGCGGTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTC‑A‑TCCGCCAAAACAGCTTCGGCGTTGTAAGGTTAAGCCTCACGGTTCATT                    >  2:5308779/1‑99
                                                                                     AACGCAGAAGCGGTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTC‑A‑TCCGCCAAAACAGCTTCGGCGTTGTAAGGTTAAGCCTCACGGTTCATT                    >  1:244926/1‑99
                                                                                       CGCAGAAGCGGTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTCAA‑TCCGCCAAAACACCTTCGGCGTTGTAAGGTTAAGCCTCACGGTTCATTA                   >  2:4034114/1‑99
                                                                                              GCGGTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTC‑A‑TCCGCCAAAACATCTTCGGCGTTGTAAGGTTAAGCCTCACGGTTCATTAGTACCGGT           <  2:5315003/99‑1
                                                                                                  TCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTC‑A‑TCCGCCAAAACAGCTTCGGCGTTGTAAGGTTAAGCCTCACGGTTCATTAGTACCGGTTAGC       <  2:2963233/99‑1
                                                                                                  TCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTC‑A‑TCCGCCAAAACAGCTTCGGCGTTGTAAGGTTAAGCCTCACGGTTCATTAGTACCGGTTAGC       >  1:3812825/1‑99
                                                                                                  TCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTC‑A‑TCCGCCAAAACAGCTTCGGCGTTGTAAGGTTAAGCCTCACGGTTCATTAGTACCGGTTAGC       >  1:715671/1‑99
                                                                                                  TCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTC‑A‑TCCGCCAAAACAGCTTCGGCGTTGTAAGGTTAAGCCTCACGGTTCATTAGTACCGGTTAGC       >  2:526390/1‑99
                                                                                                  TCTGATTTAATCTATATCAGGCTGAAAATCTTCTCTC‑A‑TTCGCCAAAACAGCTTCGGCGTTGTAAGGTTAAGCGTCTCGGTTCATTATTAACGGTTAGt       >  2:2933966/1‑98
                                                                                                   CTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTC‑A‑TCCGCCAAAACAGCTTCGGCGTTGTAAGGTTAAGCCTCACGGTTCATTAGTACCGGTTAGCT      <  2:4447575/99‑1
                                                                                                   CTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTC‑A‑TCCGCCAAAACAGCTTCGGCGTTGTAAGGTTAAGCCTCACGGTTCATTAGTACCGGTTAGCT      <  1:1273528/99‑1
                                                                                                   CTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTC‑A‑TCCGCCAAAACAGCTTCGGCGTTGTAAGGTTAAGCCTCACGGTTCATTAGTACCGGTTAGCT      >  1:465849/1‑99
                                                                                                    TGATTTAATCTGTATCAGGCTGAAAATCTTCTCTC‑A‑TCGGCCAAAACAGCTTCGGCGTTGTAAGATTAAGCCTCACGCTTCATTAGTACCGGTTAGCTC     >  2:1332845/1‑99
                                                                                                    TGATTTAATCTGTATCAGGCTGAAAATCTTCTCTC‑A‑TCCGCCAAAACAGCTTCGGCGTTGTAAGTTTAAGCCTCACGGTGCATTAGTACCGGTTAGCTC     >  2:4931381/1‑99
                                                                                                    TGATTTAATCTGTATCAGGCTGAAAATCTTCTCTC‑A‑TCCGCCAAAACAGCTTCGGCGTTGTAAGGTTAAGCCTCACGGTTCATTAGTACCGGTTAGCTC     >  1:1909630/1‑99
                                                                                                    TGATTTAATCTGTATCAGGCTGAAAATCTTCTCTC‑A‑TCCGCCAAAACAGCTTCGGCGTTGTAAGGTTAAGCCTCACGGTTCATTAGTACCGGTTAGCTC     >  1:1553951/1‑99
                                                                                                    TGATTTAATCTGTATCAGGCTGAAAATCTTCTCTC‑A‑TCCGCCAAAACAGCTTCGGCGTTGTAAGGTTAAGCCTCACGGTTCATTAGTACCGGTTAGCTC     >  2:883207/1‑99
                                                                                                    TGATTTAATCTGTATCAGGCTGAAAATCTTCTCTC‑A‑TCCGCCAAAACAGCTTCGGCGTTGTAAGGTTAAGCCTCACGGTTCATTAGTACCGGTTAGCTC     >  2:3497093/1‑99
                                                                                                    TGATTTAATCTGTATCAGGCTGAAAATCTTCTCTC‑A‑TCCGCCAAAACAGCTTCGGCGTTGTAAGGTTAAGCCTCACGGTTCATTAGTACCGGTTAGCTC     >  1:3411871/1‑99
                                                                                                    TGATTTAATCTGTATCAGGCTGAAAATCTTCTCTC‑A‑TCCGCCAAAACAGCTTCGGCGTTGTAAGGTTAAGCCTCACGGTTCATTAGTACCGGTTAGCTC     >  1:2082919/1‑99
                                                                                                     GATTTAATCTGTATCAGGCTGAAAATCTTCTCTC‑A‑TCCGCCAAAACAGCTTCGGCGTTGTAAGGTTAAGCCTCACGGTTCATTAGTACCGGTTAGCTCA    >  1:2491354/1‑99
                                                                                                     GATTTAATCTGTATCAGGCTGAAAATCTTCTCTC‑A‑TCCGCCAAAACAGCTTCGGCGTTGTAAGGTTAAGCCTCACGGTTCATTAGTACCGGTTAGCTCA    >  1:906141/1‑99
                                                                                                     GATTTAATCTGTATCAGGCTGAAAATCTTCTCTC‑A‑TCCGCCAAAACAGCTTCGGCGTTGTAAGGTTAAGCCTCACGGTTCATTAGTACCGGTTAGCTCA    >  1:4485124/1‑99
                                                                                                     GATTTAATCTGTATCAGGCTGAAAATCTTCTCTC‑A‑TCCGCCAAAACAGCTTCGGCGTTGTAAGGTTAAGCCTCACGGTTCATTAGTACCGGTTAGCTCA    >  1:16848/1‑99
                                                                                                     GATTTAATCTGTATCAGGCTGAAAATCTTCTCTC‑A‑TCCGCCAAAACAGCTTCGGCGTTGTAAGGTTAAGCCTCACGGTTCATTAGTACCGGTTAGCTCA    >  1:1565010/1‑99
                                                                                                     GATTTAATCTGTATCAGGCTGAAAATCTTCTCTC‑A‑TCCGCCAAAACAGCTTCGGCGTTGTAAGGTTAAGCCTCACGGTTCATTAGTACCGGTTAGCTCA    >  2:1094135/1‑99
                                                                                                      ATTTAATCTGTATCAGGCTGAAAATCTTCTCTC‑A‑TCCGCCAAAACAGCTTCGGCGTTGTAAGGTTAAGCCTCACGGTTCATTAGTACCGGTTAGCTCAA   >  2:912504/1‑99
                                                                                                      ATTTAATCTGTATCAGGCTGAAAATCTTCTCTC‑A‑TCCGCCAAAACAGCTTCGGCGTTGTAAGGTTAAGCCTCACGGTTCATTAGTACCGGTTAGCTCAA   >  2:4737287/1‑99
                                                                                                      ATTTAATCTGTATCAGGCTGAAAATCTTCTCTC‑A‑TCCGCCAAAACAGCTTCGGCGTTGTAAGGTTAAGCCTCACGGTTCATTAGTACCGGTTAGCTCAA   >  1:5072498/1‑99
                                                                                                      ATTTAATCTGTATCAGGCTGAAAATCTTCTCTC‑A‑TCCGCCAAAACAGCTTCGGCGTTGTAAGGTTAAGCCTCACGGTTCATTAGTACCGGTTAGCTCAA   >  2:4613683/1‑99
                                                                                                      ATTTAATCTGTATCAGGCTGAAAATCTTCTCTC‑A‑TCCGCCAAAACAGCTTCGGCGTTGTAAGGTTAAGCCTCACGGTTCATTAGTACCGGTTAGCTCAA   >  1:444199/1‑99
                                                                                                      ATTTAATCTGTATCAGGCTGAAAATCTTCTCTC‑A‑TCCGCCAAAACAGCTTCGGCGTTGTAAGGTTAAGCCTCACGGTTCATTAGTACCGGTTAGCTCAA   >  2:3240511/1‑99
                                                                                                      ATTTAATCTGTATCAGGCTGAAAATCTTCTCTC‑A‑TCCGCCAAAACAGCTTCGGCGTTGTAAGGTTAAGCCTCACGGTTCATTAGTACCGGTTAGCTCAA   >  2:1976162/1‑99
                                                                                                      ATTTAATCTGTATCAGGCTGAAAATCTTCTCTC‑A‑TCCGCCAAAACAGCTTCGGCGTTGTAAGGTTAAGCCTCACGGTTCATTAGTACCGGTTAGCTCAA   >  1:2791358/1‑99
                                                                                                      ATTTAATCTGTATCAGGCTGAAAATCTTCTCTC‑A‑TCCGCCAAAACAGCTTCGGCGTTGTAAGGTTAAGCCTCACGGTTCATTAGTACCGGTTAGCTCAA   <  2:170748/99‑1
                                                                                                       TTTAATCTGTATCAGGCTGAAAATCTTCTCTC‑A‑TCCGCCAAAACAGCTTCGGCGTTGTAAGGTTAAGCCTCACGGTTCATTAGTCCCGGTTAGCTCAcc  >  2:7459/1‑97
                                                                                                       TTTAATCTGTATCAGGCTGAAAATCTTCTCTC‑A‑TCCGCCAAAACAGCTTCGGCGTTGTAAGGTTAAGCCTCACGGTTCATTAGTACCGGTTAGCTCAAC  <  1:3354348/99‑1
                                                                                                       TTTAATCTGTATCAGGCTGAAAATCTTCTCTC‑A‑TCCGCCAAAACAGCTTCGGCGTTGTAAGGTTAAGCCTCACGGTTCATTAGTACCGGTTAGCTCAAC  <  1:310904/99‑1
                                                                                                       TTTAATCTGTATCAGGCTGAAAATCTTCTCTC‑A‑TCCGCCAAAACAGCTTCGGCGTTGTAAGGTTAAGCCTCACGGTTCATTAGTACCGGTTAGCTCAAC  <  2:1401065/99‑1
                                                                                                       TTTAATCTGTATCAGGCTGAAAATCTTCTCTC‑A‑TCCGCCAAAACAGCTTCGGCGTTGTAAGGTTAAGCCTCACGGTTCATTAGTACCGGTTAGCTCAAC  <  2:1263225/99‑1
                                                                                                       TTTAATCTGTATCAGGCTGAAAATCTTCTCTC‑A‑TCCGCCAAAACAGCTTCGGCGTTGTAAGGTTAAGCCTCACGGTTCATTAGTACCGGTTAGCTCAAC  <  1:4984882/99‑1
                                                                                                       TTTAATCTGTATCAGGCTGAAAATCTTCTCTC‑A‑TCCGCCAAAACAGCTTCGGCGTTGTAAGGTTAAGCCTCACGGTTCATTAGTACCGGTTAGCTCAAC  >  1:1078074/1‑99
                                                                                                       TTTAATCTGTATCAGGCTGAAAATCTTCTCTC‑A‑TCCGCCAAAACAGCTTCGGCGTTGTAAGGTTAAGCCTCACGGTTCATTAGTACCGGTTAGCTCAAC  >  1:5250736/1‑99
                                                                                                       TTTAATCTGTATCAGGCTGAAAATCTTCTCTC‑A‑TCCGCCAAAACAGCTTCGGCGTTGTAAGGTTAAGCCTCACGGTTCATTAGTACCGGTTAGCTCAAC  <  1:2587641/99‑1
                                                                                                                                                                                                            
ATGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/228641‑228744
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tctgatTTAATCTGTATCAGGCTGAAAATCTTCTCTC‑A‑TCCGCCAAAACAGCTTCGGCGTTGTAAGGTTAAGCCTCACGGTTCATTAGTACCGGTTAGCTCAAC  >  NC_000913/2726224‑2726321

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.