| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 75,023 | 0 | A | C | 32.1% | 84.0 / 10.1 | 54 | V153G (GTG→GGG) | thiB | thiamine/thiamine pyrophosphate/thiamine monophosphate ABC transporter periplasmic binding protein |
| Reads supporting (aligned to +/- strand): ref base A (19/17); new base C (0/17); total (19/35) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.13e-04 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
TAGTTATCTTTCTTCTCTTCGAGAATGTGATAAGCCGGAGAGGTGGTGTAACTCAGTACCAGATCGCTTTCACCTTTTAAAAACAGGCCGTAGGCTTCGCTCCAGCCTTTGGTGACCGTGACCGTTTTCTTCGCCAGTTTCTGCCAGGCTTGTGGGGCGTCATCGCCATAGACTTTTTGCATCCATAGCAACAGACCCAGCCCCGGTGTACTGGTGCGCGGA‑TCCTGATAAATCACCCGCCAGTTTTGATCGCTCTCAACCAGTTCTTTCAGGCTTTGTGGCGGGTTTTTCAGTTTGTTCTTGTCATAAACGAAGGCGAAGTAGCCATAATCAAACGGTACGAAAGTGTCATTATTCCAGCCGCCGGGAACGTTAACGGCATCCGCTGCCACACCGCTTTTGGCAAACAGTCCGGTTTTACTGGCGGCGTCTAACAGGTTGTTATCCAGCCCCAGCACCACAT > NC_000913/74789‑75251 | tAGTTCTCTTTCTTCGCTTCGAGAAGGTGATAAGCAGGAGAGGTGGGGTAACTAAGGACCAGTCCGCTTCCACCTTTAAAAAACAGGCCGTAGGCTTCGCCCCATCCTTTGGTGACCGTGCCCGTTTTCTTCGCCCGTTTCTGCCAGGCTTGTGGGGCGTCATCGCCATAGATTTTTTGCATCCATAGCAACAGCCCCAGCCCCGGTGTACTGGTGCGCGGA‑TCCTGATAAATCACCCg < 2:89695/239‑1 (MQ=255) tttcttCTCTTCGAGAATGTGATAAGCCGGAGAGGTGGTGTAACTCAGTACCAGATCGCTTTCACCTTTTAAAAACAGGCCGTAGGCTTCGCTCCAGCCTTTGGTGACCGTGACCGTTTTCTTCGCCAGTTTCTGCCAGGCTTGTGGGGCGTCATCGCCATAGACTTTTTGCATCCATAGCAACAGACCCAGCCCCGGTGTACTGGTGCGCGGA‑TCCTGATAAATCACCCGCCAGtttt > 1:1184168/1‑239 (MQ=255) tcttctcttcGAGAATGTGATAAGCCGGAGAGGTGGTGTAACTCAGTACCAGATCGCTTTCACCTTTTAAAAACA‑GCCGTAGGCTTCGCTCCAGCCTTTGGTGACCGTGACCGTTTTCTTCGCCAGTTTCTGCCAGGCTTGTGGGGCGTCATCGCCATAGACTTTTTGCATCCATAGCAACAGACCCAGCCCCGGTGTACTGGTGCGCGGA‑TCCTGATAAATCACCCGCCAGTTTTGa > 1:856608/1‑238 (MQ=255) tctcctcttcGAAAATGTGATAAGCGGGAGGGGTGGTGTACCTCAGTCCCAGATCTCTTCCCCCTTTAAAAAACA‑GCCGTAGGCTTCGCCCCAGCTTTTGGTGACCGTGACCGTTTTCTTCGCCATTTTCTGCCAGGCTTGTGGGGCGTCATCGCCATAGCCTTTTTGCATCCATAGCAACAGCCCCAGCCCCGGTGTACTGGTGCGCGGA‑TCCTGATAAATCACCCGCCAGTTTTGAt < 2:856608/239‑1 (MQ=255) atgtaagaggCCGGAGAGGTGTGGTACCTCGGTCCCGGTTCGCTTACACTTTTGAAAAGCAGGCCGGGGGCTTCGCTCCGGCTTTGGGTGACCGTGACAGTTTCCTTCGCCAGTTTCTGCCAGGCTTGGGGGGGGTCATCGCCATAGACTTTTTGCATCCAAAGCAACAGACCCAGCCCCGGTGTCCTGGTGCGCGGA‑TCCTAAGAAATCACCCGCCAGTTTTGATCGCTCTCAACCAg < 2:1035081/230‑1 (MQ=255) gCCGGAGAGGGGGTGTACCCAGGTCCCAGACCGTTTTCACCTTTAAAAAACAGGCCTTAGGCTTCGCTCCAGCTTTGGGGAACCGTGCCCGTTTTCTTCGCCAGTTTCGGCCAGGCTTGTGGGGCGTCATCGCCATAGCCTTTTGGCATCCATAGAAACAGACCCGGCCCCGGTGTCCTGGTGCGCGGA‑TCCTGATAAATCACCCGCCAGTTTTGATCGctc < 2:167689/222‑1 (MQ=255) gtggtgTAACTCAGTACCAGATCGCTTTCACCTTTTAAAAACAGGCCGTAGGCTTCGCTCCAGCCTTTGGTGACCGTGACCGTTTTCTTCGCCAGTTTCTGCCAGGCTTGTGGGGCGTCATCGCCATAGACTTTTTGCATCCATAGCAACAGACCCAGCCCCGGTGTACTGGTGCGCGGC‑TCCTGATAAATCACCCGCCAGTTTTGATCGCTCTCAACCAGTTCTTTCAGGCTTtgtg > 1:635630/1‑238 (MQ=255) tggtgTAACTCAGTACCAGATCGCTTTCACCTTTTAAAAACAGGCCGTAGGCTTCGCTCCAGCCTTTGGTGACCGTGACCGTTTTCTTCGCCAGTTTCTGCCAGGCTTGTGGGGCGTCATCGCCATAGACTTTTTGCATCCATAGCAACAGACCCAGCCCCGGTGTACTGGTGCGCGGA‑TCCTGATAAATCACCCGCCAGTTTTGATCGCTCTCAACCAGtt > 1:167689/1‑222 (MQ=255) tgtAGCCCAGCACCAGATCGCTTTCCCTTTTTAAAAACAGGCGGTAGGCTACGCGCCAGCCTTTGGTGCCCGAGCCCCTTTTCTTCGCAAGTTTCTGCCAGGTTTGTGGGGCGTCTTCGCTATAGACTTTTTGCATCCACAACAACAGACCCAGCCCCGGTGTCCTGGTGCGCGGA‑TCCTGATAAATCACCCGCCAGTTTTGATCGCTCTCaa < 2:225757/213‑1 (MQ=255) cAGTACCAGATCGCTTTCACCTTTTAAAAACAGGCCGTAGGCTTCGCTCCAGCCTTTGGTGACCGTGACCGTTTTCTTCGCCAGTTTCTGCCAGGCTTGTGGGGCGTCATCGCCATAGACTTTTTGCATCCATAGCAACAGACCCAGCCCCGGTGTACTGGTGCGCGGA‑TCCTGATAAATCACCCGCCAGTTTTGATCGCTCTCAACCAGTTCTTTCAGGCTTTGTGGCGGGgtttttc > 1:1170095/1‑237 (MQ=255) tACCAGATCGCTTTCACCTTTTAAAAACAGGCCGTAGGCTTCGCTCCAGCCTTTGGTGACCGTGACCGTTTTCTTCGCCAGTTTCTGCCAGGCTTGTGGGGCGTCATCGCCATAGACTTTTTGCATCCATAGCAACAGACCCAGCCCCGGTGTACTGGTGCGCGGA‑TCCTGATAAATCACCCGCCAGTTTTGATCGCTCTCAACCAGTTCTTTCAGGCTTTGTGGCGGGgttttttgtt > 1:38696/1‑234 (MQ=255) tACCAGATCGCTTTCACCTTTTAAAAACAGGCCGTAGGCTTCGCTCCAGCCTTTGGTGACCGTGACCGTTTTCTTCGCCAGTTTCTGCCAGGCTTGTGGGGCGTCATCGCCATAGACTTTTTGCATCCATAGCAACAGACCCAGCCCCGGTGTACTGGTGCGCGGA‑TCCTGATAAATCACCCGCCAGTTTTGATCGCTCTCAACCAGTTCTTTCAGGCTTTGTGGCGGGGTTTTctcgt > 1:949918/1‑235 (MQ=255) tACCAGATCGCTTTCACCTTTTAAAAACAGGCCGTAGGCTTCGCTCCAGCCTTTGGTGACCGTGACCGTTTTCTTCGCCAGTTTCTGCCAGGCTTGTGGGGCGTCATCGCCATAGACTTTTTGCATCCATAGCAACAGACCCAGCCCCGGTGTACTGGTGCGCGGA‑TCCTGATAAATCACCCGCCAGTTTTGATCGATCTCAACCAGTTCTTTCAGGCTTTGTGGCGGGgttttt > 2:1025663/1‑234 (MQ=255) tACCAGATCGCTTTCACCTTTTAAAAACAGGCCGTAGGCTTCGCTCCAGCCTTTGGTGACCGTGACCGTTTTCTTCGCCAGTTTCTGCCAGGCTTGTGGGGCGTCATCGCCATAGACTTTTTGCATCCATAGCAACAGACCCAGCCCCGGTGTACTGGGGCGCGGA‑TCCTGATAAATCACCCGCCAGTTTTGATCGCTCTCAACCAGTTCttt > 1:225757/1‑213 (MQ=255) aCCAGGTCGCTTTCACCTTTTAAAAACAGGCCGTGGGCTTCCCTCCAGCCTTTGGTGCCCGTGACCTTTTTCTTCGCCAGTTTCTGCCAGGCTTGTGGGGCGTCATCGCCATAGACTTTTTGCATCCATAGCAACAGACCCAGCCCCGGTGTACTGGTGCGCGGA‑TCCTGATAAATCACCCGCCAGTTTTGATCGCTCTCAACCAGTTCTTTCAGGCTTTGTGGCGGGTTTTTCAGt < 2:949918/237‑1 (MQ=255) gATCGCTTTCACCTTTTAAAAACAGGCCGTAGGCTTCGCTCCAGCCTTTGGTGACCGTGACCGTTTTCTTGGCCAGTTTCTGCCAGGCTTGTGGGGGGTCATCGCCATAGACTTTTTGCATCCATAGCAACAGACCCAGCCCCGGTGTACTGGTGCGCGGA‑TCCTGATAAATCTCCCGc < 1:1140315/179‑1 (MQ=255) gATCGCTTTCACCTTTTAAAAACAGGCCGTAGGCTTCGCTCCAGCCTTTGGTGACCGTGACCGTTTTCTTCGCCAGTTTCTGCCAGGCTTGTGGGGCGTCATCGCCATAGACTTTTTGCATCCATAGCAACAGACCCAGCCCCGGTGTACTGGTGCGCGGA‑TCCTGATAAATCACCCGc > 2:1140315/1‑179 (MQ=255) gATCGCTTTCACCTTTTAAAAACAGGCCGTAGGCTTCGCTCCAGCCTTTGGTGACCGTGACCGTTTTCTTCGCCAGTTTCTGCCAGGCTTGTGGGGCGTCATCGCCATAGACTTTTTGCATCCATAGCAACAGACCCAGCCCCGGTGTACTGGTGCGCGGA‑TCCTGATAAATCACCCGCCAGtt > 1:611818/1‑184 (MQ=255) cTTTCACCTTTTAAAAACAGGCCGTAGGCTTCGCTCCAGCCTTTGGTGACCGTGACCGTTTTCTTCGCCAGTTTCTGCCAGGCTTGTGGGGCGTCATCGCCATAGACTTTTTGCATCCATAGCAACAGACCCAGCCCCGGTGTACTGGTGCGCGGA‑TCCTGATAAATCACCCg < 1:158634/173‑1 (MQ=255) cTTTCACCTTTTAAAAACAGGCCGTAGGCTTCGCTCCAGCCTTTGGTGACCGTGACCGTTTTCTTCGCCAGTTTCTGCCAGGCTTGTGGGGCGTCATCGCCATAGACTTTTTGCATCCATAGCAACAGACCCAGCCCCGGTGTACTGGTGCGCGGA‑TCCTGATAAATCACCCg > 2:158634/1‑173 (MQ=255) cTTTCACCTTTTAAAAACAGGCCGTAGGCTTCGCTCCAGCCTTTGGTGACCGTGACCGTTTTCTTCGCCAGTTTCTGCCAGGCTTGTGGGGCGTCATCGCCATAGACTTTTTGCATCCATAGCAACAGACCCAGCCCCGGTGTACTGGTGCGCGGA‑TCCTGATAAATCACCCGCCAGTTTTGATCGctc < 1:159496/189‑1 (MQ=255) cTTTCACCTTTTAAAAACAGGCCGTAGGCTTCGCTCCAGCCTTTGGTGACCGTGACCGTTTTCTTCGCCAGTTTCTGCCAGGCTTGTGGGGCGTCATCGCCATAGACTTTTTGCATCCATAGCAACAGACCCAGCCCCGGTGTACTGGTGCGCGGA‑TCCTGATAAATCACCCGCCAGTTTTGATCGctc > 2:159496/1‑189 (MQ=255) aaccAGCCCGTAGGCTTCGCTCCAGCCTTTGGTGACCGTGACCGTTTTCTTCGCCAGTTTCTGCCAGGCTTGTGGGGCGTCATCGCCATAGCCTTTTTGCATCCATAGCACCAGCCCCAGCCCCGGTGTACTGGTGCGCGGA‑TCCTGATAAATCCCCCGCCAGTTTTGATCGCTCTCAACCAGTTCTTTCAGGCTTTGTGGCGGGTTTTTCAGTTTGTTCTTGTCATAAACGAAGGCGa < 1:442499/236‑1 (MQ=255) gCCGTAGGCTTCGCTCCAGCCTTTGGTGACCGTGACCGTTTTCTTCGCCAGTTTCTGCCAGGCTTGTGGGGCGTCATCGCCATAGACTTTTTGCATCCATAGCAACAGACCCAGCCCCGGTGTACTGGTGCGCGGA‑TCCTGATAAATCACCCGc > 2:1206945/1‑154 (MQ=255) gCCGTAGGCTTCGCTCCAGCCTTTGGTGACCGTGACCGTTTTCTTCGCCAGTTTCTGCCAGGCTTGTGGGGCGTCATCGCCATAGACTTTTTGCACCCATAGCAACAGACCCAGCCCCGGTGTACTGGTGCGCGGA‑TCCTGATAAATCACCCGc < 1:1206945/154‑1 (MQ=255) gCTTCCCTCCAGCCTTTGGTGCCCGGGACTGTTTTTTTCGCCAGTTTCGGCCGGGCTTGTGGGGCGTCATCGCCATAGACTTTTTGCATCCATAGCAACAGACCCAGCCCCGGTGTACTGGTGCGCGGA‑TCCTGATAAATCCCCCGCCAGTTTTGAt < 2:1081273/157‑1 (MQ=255) tccccTCCGGCTTTGGGAGCCCGTGCCCTTTTTTTTGGCCGTTTTCGGCCGGGCTTAGGGGGCGCAATCGCCATAGTCTTTTGACACCCATAGCACCAGACCCGGCCCCGGTGTCCTGGTGCGGGTA‑TCTTGAAAAATCCCCCGCCAGTTTTGATCGCTCTCAACCAGTTCTTTCAGGCTTTGTGGCGGGTTTTTCAGTTTGTTCTTGTCATAAACGAAGGCGAAGTAGCCATAATCa < 2:295906/234‑1 (MQ=255) aGCCTTTGGTGACCGTGACCGTTTTCTTCGCCAGTTTCTGCCAGGCTTGTGGGGCGTCATCGCCATAGACTTTTTGCATCCATAGCAACAGACCCAGCCCCGGTGTACTGGTGCGCGGA‑TCCTGATAAATCACCCGCCAGTTTTGATCGCTCTCAAc > 1:1081273/1‑157 (MQ=255) ttgtGGTAACCTTGCCCGTTTCCTTCGCCAGTTTCTGCCAGGCTTGGGGGGCGCCATCGCCATAGTCTTTTTGCATCCATAGCAACAGCCCCAGCCCCGGTGTACTGGTGCGCGTA‑TCCTAATAAATCACCCGCCAGTTTTGATCGCTCTCAACCAGTTCTTTCAGGCTTTGTGGCGGGTTTTTCAGTTTGTTCTTGTCATAAACGAAGGCGAAGTAGCCATAATCAAACGGTAc < 2:814334/232‑1 (MQ=255) ttGTGGGGCGTCATCGCCATAGACTTTTTGCACCCATAGCACCAGCCCCAGCCCCGGTGTACTGGTGCGCGGA‑TCCTGATAAATCACCCGCCAGTTTTGATCg < 2:28693/103‑1 (MQ=255) tCATCGCCATAGACTTTTTGCATCCATAGCAACAGACCCAGCCCCGGTGTACTGGTGCGCGGC‑TCCTGAAAAATCACCCGCCAGTTTTGATCGCTCTCAACCAGTTCTTTc < 2:852273/111‑1 (MQ=255) tCATCGCCATAGACTTTTTGCATCCATAGCAACAGACCCAGCCCCGGTGTACTGGTGCGCGGA‑TCCTGATAAATCACCCGCCAGTTTTGATCGCTCTCAACCa > 1:28693/1‑103 (MQ=255) tCATCGCCATAGACTTTTTGCATCCATAGCAACAGACCCAGCCCCGGTGTACTGGTGCGCGGA‑TCCTGATAAATCACCCGCCAGTTTTGATCGCTCTCAACCAGTTCTTTc > 1:852273/1‑111 (MQ=255) aCTTTTTGCATCCATAGCAACAGACCCAGCCCCGGTGTACTGGTGCGCGGA‑TCCTGATAAATCACCCGCCAGTTTTGATCGCTCTCAACCAGTTCTTTCAGGCTTTGTGGCGGGTTTTTCAGTTTGTTCTTGTCATAAACGAAg < 1:1134368/144‑1 (MQ=255) aaaGCAACGAACCGACCCCCGGTGTACTGGGGC‑CGGACTCCTGTAAATTCCCCCGCCAGTTTTGATCGCTCTCAACCAGTTCTTTCAGGCTTTGTGGCGGGTTTTTCAGTTTGTTCTTGTCATAAACGAAGGCGAAGTAGCCATAATCAAACGGTACGAAAGTGTCATTATTCCAGCCGCCGGGAACGTTAACGGCATCCg < 1:369657/199‑1 (MQ=255) aTAGCAACAGACCCAGCCCCGGTGTACTGGTGCGCGGA‑TCCTGATAAATCCCCCGCCAGTTTTGATCGCTCTCAACCAGTTCTTTCAGGCTTTGTGGCGGGTTTTTCAGTTTGTTCTTGTCATAAACGAAGGCGAAGTAGCCATAATCa < 1:1084117/149‑1 (MQ=255) cAACAGACCCAGCCCGGGTGTGCTGGTGCGCGGA‑TCCTGATAAATCACCCGCCAGTTTTGATCGCTCTCAACCAGTTCTTTCAGGCTTTGTGGCGGGTTTTTCAGTTTGTTCTTGTCATAAACGAAGGCGAAGTAGCCa < 1:1144064/139‑1 (MQ=255) acaaaccccAGCCCCGTTGTCGTGGTGCGCGGT‑TCCTAATAAATCCCCCGCCAGTTTTGATCGCTCTCAACCAGTTCTTTCAGGCTTTGTGGCGGGTTTTTCAGTTTGTTCTTGTCATAAACGAAGGCGAAGTCGCCATAATCAAACGGTACGAAAGTGTCATTATTCCAGCCGCCGGGAACGTTAACGGCATCCGCTGCCACACCGCTTTTGGCAAACAGTCCGGTTTTACTgg < 1:1002545/229‑1 (MQ=255) ccccAGCCCCGGTGTCCTGGTGCGCGGG‑TCCTTATAAATCCCCCGCCAGTTTTGATCGCTCTCAACCAGTTCTTTCAGGCTTTGTGGCGGGTTTTTCAGTTTGTTCTTGTCATAAACGAAGGCGAAGTAGCCATAATCaaa < 1:673224/140‑1 (MQ=255) cggCCCGGGTTTCCTGGTGCGCGGA‑TCCTGATAAATCCCCCGCCAGTTTTGATCGCTCTCAACCAGTTCTTTCAGGCTTTGTGGCGGGTTTTTCAGTTTGTTCTTGTCATAAACGAAGGCGAAGTAGCCATAATCAAACGGTACGAAAGTGTCATTATTCCAGCCGCCGGGAACGTTAACGGCATCCGCTGCCACACCGCTTTTGGCAAACAGTCCGGTTTTACTGGCGGCGTCTAACa < 1:1018453/237‑1 (MQ=255) aGCCCCGGTGTACTGGTGCGCGGA‑TCCTGATAAATCACCCGCCAGTTTTGAt > 2:160279/1‑52 (MQ=255) aGCCCCGGTGTACTGGTGCGCGGA‑TCCGGATAAATCACCCGCCAGTTTTGAt < 1:160279/52‑1 (MQ=255) ccccGGTGTCCTGGTGCGCGGA‑TCCTGATAAATCACCCGCCAGTTTTGATCGCTCTCAACCAGTTCTTTCAGGCTTTGTGGCGGGTTTTTCAGt < 1:615582/94‑1 (MQ=255) tttACTGGTGCGCGGA‑TCCTGATAAATCCCCCGCCAGTTTTGATCGCTCTCAACCAGTTCTTTCAGGCTTTGTGGCGGGTTTTTCAGTTTGTTCTTGTCATAAACGAAGGCGAAGTAGCCATAATCAAACGGTACGAAAGTGTCATTATTCCAGCCGCCGGGAACGTTAACGGCATCCGCTGCCACACCGCTTTTGGCAAACAGTCCGGTTTTAc < 1:29111/213‑1 (MQ=255) tgtCCTGGTGCGCGGA‑TCCTGATAAATCCCCCGCCAGTTTTGATCGCTCTCAACCAGTTCTTTCAGGCTTTGTGGAGGGTTTTTCAGTTTGTTCTTGTCATAAACGAAGGCGAAGTAGCCATAATCAAACGGTACGAAAGTGTCATTATTCCAGCCGCCGGGAACGTTAACGGCATc < 1:1094304/177‑1 (MQ=255) tACTGGTGCGCGGT‑TCCTAATAAATCCCCCGCCAGTTTTGATCGCTCTCAACCAGTTCTTTCAGGCTTTGTGGCGGGTTTTTCAGTTTGTTCTTGTCATAAACGAAGGCGAAGTAGCCATAATCa < 2:712725/125‑1 (MQ=255) tACTGGTGCGCGGA‑TCCTGATAAATCCCCCGCCAGTTTTGATCGCTCTCAACCAGTTCTTTCAGGCTTTGTGGCGGGTTTTTCAGTTTGTTCTTGTCATAAACGAAGGCGAAGTAGCCa < 1:1114031/119‑1 (MQ=255) tACTGGTGCGCGGA‑TCCTGATAAATCCCCCGCCAGTTTTGATCGCTCTCAACCAGTTCTTTCAGGCTTTGTGGCGGGTTTTTCAGTTTGTTCTTGTCATAAACGAAGGCGAAGTAGCCATAATCAAACGGTACGAAAGTGTCATTATTCCAGCCGCCGGGAACGTTAACGGCATCCGCTGCCACACCGCTTTTGGCAAACAGTCCGGTTTTACTggcg < 1:1410927/218‑1 (MQ=255) tGCGCGTC‑TCCTGAAAAATCCCCCGCCAGTTTTGATCGCTCTCAACCAGTTCTTTCAGGCTTTGTGGCGGGTTTTTCAGTTTGTTCTTGTCATAAACGAAGGCGAAGTAGCCATAATCAAACGGTACGAAAGTGTCATTATTCCAGCCGCCGGGAACGTTAACGGCATCCGCTGCCACACCGCTTTTGGCAAACAGTCCGGTTTTACTGGCGGCGTCTAACAGGTTGTTATCCAGccc < 2:38696/238‑1 (MQ=255) gcgGA‑TCCTGATAAATCCCCCGCCAGTTTTGATCGCTCTCAACCAGTTCTTTCAGGCTTTGTGGCGGGTTTTTCAGTTTGTTCTTGTCATAAACGAAGGCGAAGTAGCCATAATCAAACGGTACGAAAGTGTCATTATTCCAGCCGCCGGGAACGTTAACGGCATCCGCTGCCACACCGCTTTTGGCAAACAGTCCGGTTTTACTGGCGGCGTCTAACAGGTTGTTATCCAGCCCCAGc < 1:610266/239‑1 (MQ=255) cgGA‑TCCTGATAAATCACCCGCCAGTTTTGATCGCTCTCAACCAGTTCTTTCAGGCTTTGTGGCGGGGTTTTTTTTTTTTTTTTTTTTTTAACCAAAGCGGAGGAGCCCTAATCAAAca > 2:1114031/1‑118 (MQ=255) ggA‑TCTTTATAACTCCCCCGCCAGTTTTGATCGCTCTCAACCAGTTCTTTCAGGCTTTGTGGCGGGTTTTTCAGTTTGTTCTTGTCATAAACGAAGGCGAAGTAGCCATAATCAAACGGTACGAAAGTGTCATTATTCCAGCCGCCGGGAACGTTAACGGCATCCGCTGCCACACCGCTTTTGGCAAACAGTCCGGTTTTACTGGCGGCGTCTAACAGGTTGTTATCCAGCCCCAGca < 1:320607/238‑1 (MQ=255) gA‑TCCTGATAAATCACCCGCCAGTTTTGATCGCTCTCAACCAGTTCTTTCAGGCTTTGTGGCGGGTTTTTCAGTTTGTTCTTGTCATAAACGAAGGCGAAGTAGCCATAATCAAACGGTACGAAAGTGTCATTATTCCAGCCGCCGGGAACGTTAACGGCATCCGCTGCCACACCGCTTTTGGCAAACAGTCCGGTTTTACTGGCGGCGTCTAACAGGTTGTTATCCAGCCCCAGcac < 1:1025663/238‑1 (MQ=255) ttGAAAAACCCCCCGCCAGTTTGGATCGCTCTCAACCAGTTCTTTCAGGCTTTGTGGCGGGTTTTTCAGTTTGTTCTTGTCATAAACGAAGGCGAGGTAGCCATAATCAAACGGTACGAAAGTGTCATTATTCCGGCCGCCGGGAACGTTAACGGCATCCGCTGCCACACCGCTTTTGGCAAACAGTCCGGTTTTACTGGCGGCGTCTAACAGGTTGTTATCCAGCCCCAGCACCACAt < 1:814298/238‑1 (MQ=255) | TAGTTATCTTTCTTCTCTTCGAGAATGTGATAAGCCGGAGAGGTGGTGTAACTCAGTACCAGATCGCTTTCACCTTTTAAAAACAGGCCGTAGGCTTCGCTCCAGCCTTTGGTGACCGTGACCGTTTTCTTCGCCAGTTTCTGCCAGGCTTGTGGGGCGTCATCGCCATAGACTTTTTGCATCCATAGCAACAGACCCAGCCCCGGTGTACTGGTGCGCGGA‑TCCTGATAAATCACCCGCCAGTTTTGATCGCTCTCAACCAGTTCTTTCAGGCTTTGTGGCGGGTTTTTCAGTTTGTTCTTGTCATAAACGAAGGCGAAGTAGCCATAATCAAACGGTACGAAAGTGTCATTATTCCAGCCGCCGGGAACGTTAACGGCATCCGCTGCCACACCGCTTTTGGCAAACAGTCCGGTTTTACTGGCGGCGTCTAACAGGTTGTTATCCAGCCCCAGCACCACAT > NC_000913/74789‑75251 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |