| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,749,326 | A→C | D32A (GAT→GCT) | sgbU → | putative L‑xylulose 5‑phosphate 3‑epimerase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,749,326 | 0 | A | C | 98.7% | 244.5 / NA | 74 | D32A (GAT→GCT) | sgbU | putative L‑xylulose 5‑phosphate 3‑epimerase |
| Reads supporting (aligned to +/- strand): ref base A (0/1); new base C (40/33); total (40/34) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.59e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
CCCCTGCTGACCTGCCGCTGTTTAAAGATATCCGCGTGAAAGCGTTTATTGCCGGGCGGGCACTGGCAGGCGCGGCAAATCCGGCGCAAGTGGCTGGCGATTTCCATGCGCAAATCGACGCTATCTGGGGAGGTGCGCGTGCGTAATCATCAGTTAGGGATTTATGAAAAAGCGCTGGCGAAAGATCTCTCCTGGCCGGAGCGGCTGGTGCTGGCA‑AAAAGCTGCGGTTTTG‑ATTTTGTCGAAATGTCGGTGGATGAAACCGACGAACGGCTCTCACGTCTTGACTGGAGCGCCGCACAAAGGACTTCGCTGG‑TTGCCGCGATGATCGAAACAGGTGTTGGGATCCCGTC‑GATGTGCCTGTCCGCACATCGTCGCTTTCCCTTTGGTAGCCGTGACGAGGCAGTGCGCGAACGGGCGCGGGAAATCATGAGTAAAGCGATTCGCCTGGCGCGCGATCTCGGCAT > NC_000913/3749094‑3749557 | ccctTGCGGACTTGCCGATGTTTAAAGATATCCGCGTGAAAGCGTTTATTGCCGGGCGGGCACTGGCAGGCGCGGCAAATCCGGCGCAAGTGGCTGGCGATTTCCATGCGCAAATCGACGCTATCTGGGGAGGTGCGCGTGCGTAATCATCAGTTAGGGATTTATGAAAAAGCGCTGGCGAAAGATCTCTCCTGGCCGGAGCGGCTGGTGCTGGCA‑AAAAGCTGCGGTTTTG‑Ctt < 1:288849/235‑1 (MQ=255)ccccTGCTGACCTGCCGCTGTTGAAAGATATCCGCGTGAAAGCGTTTATTGCCGGGCGGGCACTGGCAGGCGCGGCAAATCCGGCGCAAGTGGCTGGCGATTTCCATGCGCAAATCGACGCTATCTGGGGAGGTGCGCGTGCGTAATCATCAGTTAGGGATTTATGAAAAAGCGCTGGCGAAAGATCTCTCCTGGCCGGAGCGGCTGGTGCTGGCA‑AAAAGCTGCGGTTTTG‑Ctt < 1:705709/235‑1 (MQ=255) ctgACCTGCCGCTGTTTAAAGATATCCGCGTGAAAGCGTTTATTGCCGGGCGGGCACTGGCAGGCGCGGCAAATCCGGCGCAAGTGGCTGGCGATTTCCATGCGCAAATCGACGCTATCTGGGGAGGGGCGCGTGCGTAATCATCAGTTAGGGATTTATGAAAAAACGCTGGCGAAAGATCTCTCCTGGCCGGAGCGGCTGGTGCTGGCA‑CAAAGCTGCGGTGTTG‑CTTTTGTCGa > 1:357800/1‑236 (MQ=255) ccTGCCGCTGTTTAAAGATATCCGCGTGAAAGCGTTTATTGCCGGGCGGGCACTGGCAGGCGCGGCAAATCCGGCGCAAGTGGCTGGCGATTTCCCTGCGCCAATCGACGCTATCTGGGGAGGTGCGCGGGCGTAATCCTCAGTTAGGGATTTATGGAAAAGCGCTGGCGAAAGGTCTCTCCCGGCCGGGGCGGCGTGGGCTGGCACAAACGCTGGGGGTTGG‑CTTTTG‑CGAAATg > 2:470734/1‑236 (MQ=255) cggCTGTTTAAAGATATCCGCGTGAAAGCGTTTATTGCCGGGCGGGCACTGGCAGGCGCGGCAAATCCGGCGCAAGTGGCTGGCGATTTCCATGCGCAAATCGACGCTATCTGGGGAGGTGCGCGTGCGTAATCATCAGTTAGGGATTTATGAAAAAGCGCTGGCGAAAGATCTCTCCTGGCCGGAGCGGCTGGTGCTGGCA‑AAAAGCTGCGGTTTTG‑CTTTTGTCGAAATGTCg < 2:221909/233‑1 (MQ=255) ccGCTGTTTAAAGATATCCGCGTGAAAGCGTTTATTGCCGGGCGGGCACTGGCAGGCGCGGCAAATCCGGCGCAAGTGGCTGGCGATTTCCATGCGCAAATCGACGCTATCTGGGGAGGTGCGCGTGCGTAATCATCAGTTAGGGATTTATGAAAAAGCGCTGGCGAAAGATCTCTCCTGGCCGGAGCGGCTGGTGCTGGCA‑AAAAGCTGCGGTTTTG‑CTTTTGTCGAAATGt < 2:501913/233‑1 (MQ=255) ccGCTGTTTAAAGATATCCGCGTGAAAGCGTTTATTGCCGGGCGGGCACTGGCAGGCGCGGCAAATCCGGCGCAAGTGGCTGGCGATTTCCATGCGCAAATCGACGCTATCTGGGGAGGTGCGCGTGCGTAATCATCAGTTAGGGATTTATGAAAAAGCGCTGGCGAAAGATCTCTCCTGGCCGGAGCGGCTGGTGCTGGCA‑AAAAGCTGCGGTTTTG‑CTTTTGTCGAAATGt > 1:501913/1‑233 (MQ=255) tCCGCGTGAAAGCGTTTATTGCCGGGCGGGCACTGGCAGGCGCGGCAAATCCGGCGCAAGTGGCTGGCGATTTCCATGCGCAAATCGACGCTATCTGGGGAGGTGCGCGTGCGTAATCATCAGTTAGGGATTTATGAAAAAGCGCTGGCGAAAGATCTCTCCTGGCCGGAGCGGCTGGTGCTGGCA‑AAAAGCTGCGGGTTTG‑CTTTTGTCGAAATGTCGGTGGATGAAACcgacga > 1:60714/1‑236 (MQ=255) tCCGCGTGAAAGCGTTTATTGCCGGGCGGGCACTGGCAGGCGCGGCAAATCCGGCGCAAGTGGCTGGCGATTTCCATGCGCAAATCGACGCTATCTGGGGAGGTGCGCGTGCGGAATCATCAGTTAGGGATTTATGAAAAAGCGCTGGCGAAAGATCTCTCCTGGCCGGGGCGGCTGGGGCTGGCA‑AAAAACTGCGGGTTTG‑CTTTTGTCGTAAAGTCGGTGGGTGGAAacgacgc > 2:198147/1‑235 (MQ=255) tCCGCGTGAAAGCGTTTATTGCCGGGCGGGCACTGGCAGGCGCGGCAAATCCGGCGCAAGTGGCTGGCGATTTCCATGCGCAAATCGACGCTATCTGGGGAGGGGCGCGTGCGTAATCATCAGTTAGGGATTTATGAAAAAGCGCTGGCGAAAGATCTCTCCTGGCCGGAGAGGCTGGGGCTTGGA‑AAAAGCGGCGGGTTTGCCTTTTGTTGAAAGTTGGGTGGTGGAATCcgcga > 2:80613/1‑233 (MQ=255) gaaGTGTTTACTGCCGGGCGGCCACTGGCAGGCGCGGCAACTCCGGCGCAAGTGGCTGGCGATTTCCATGCGAAAATCGACGCTATCTGGGGAGGTGCGCGTGCGTAATCATCAGTTAGGGATTTATGAAAAAGCGCTGGCGAAAGATCTCTCCTGGCCGGAGCGGCTGGTGCTGGCA‑AAAAGCTGCGGTTTTG‑CTTTTGTCGAAATGTCGGTGGATGAAACCGACGAACGGctct < 2:220265/235‑1 (MQ=255) aaaGCGTTTATTGCCGGGCGGGCACGGGCAGGCTCGGCAAATCCGGCGGAAGTGGCTGGCGATTTCCATGCGCAAATCGACGCTATCTGGGGAGGTGCGCGTGCGTAATCATCAGTTAGGGATTTATGAAAAAGCGCTGGCGAAAGATCTCTCCTGGCCGGAGCGGCTGGTGCTGGCA‑AAAAGCTGCGGTTTTG‑CTTTTGTCGAAATGTCGGTGGATGAAACCGACGAACGGctct < 2:99205/236‑1 (MQ=255) tagtgcagagcgggcACTGGCAGGCGCGGCAAATCCGGCGCAAGTGGCTGGCGATTTCCATGCGCAAATCGACGCTATCTGGGGAGGTGCGCGTGCGTAATCATCAGTTAGGGATTTATGAAAAAGCGCTGGCGAAAGATCTCTCCTGGCCGGAGCGGCTGGTGCTGGCA‑AAAAGCTGCGGTTTTG‑CTTTTGTCGAAATGTCGGTGGATGAAACCGACGAACGGCTCTCACGTc < 2:626593/225‑1 (MQ=255) tATTGCCGGGCGGGCCCTGGCAGGCGCGGCAAATCCGGCGCAAGTGGCTGGCGATTTCCATGCGCAAATCGACGCTATCTGGGGAGGTGCGCGTGCGTAATCATCAGTTAGGGATTTATGAAAAAGCGCTGGCGAAAGATCTCTCCTGGCCGGAGCGGCTGGTGCTGGCA‑AAAAGCTGCGGTTTTG‑CTTTTGTCGAAATGTCGGTGGATGAAACCGACGAACGGCTCTCACGTc < 2:296274/234‑1 (MQ=255) gcACTGGCAGGCGCGGCAAATCCGGCGCAAGTGGCTGGCGATTTCCATGCGCAAATCGACGCTATCTGGGGAGGTGCGCGTGCGTAATCATCAGTTAGGGATTTATGAAAAAGCGCTGGCGAAAGATCTCTCCTGGCCGGAGCGGCTGGTGCTGGCA‑AAAAGCTGCGGTTTTG‑CTTTTGTCGAAATGTCGGTGGATGAAACCGACGAACGGCTCTCACGTCTTGACTGGAGcgcc < 1:620358/235‑1 (MQ=255) aCTGGCAGGCGCGGCAAATCCGGCGCAAGTGGCTGGCGATTTCCATGCGCAAATCGACGCTATCTGGGGAGGTGCGCGTGCGTAATCATCAGTTAGGGATTTATGAAAAAGCGCTGGCGAAAGATCTCTCCTGGCCGGAGCGGCTGGTGCTGGCA‑AAAAGCTGCGGTTTTG‑CTTTTGTCGAAATGTCGGTGGATGAAACCGACGAACGGCTCTCACGTCTTGACTGGAGCGCCGca > 1:596321/1‑236 (MQ=255) cAAATCCGGCGCAAGTGGCTGGCGATTTCCATGCGCAAATCGACGCTATCTGGGGAGGTGCGCGTGCGTAATCATCAGTTAGGGATTTATGAAAAAGCGCTGGCGAAAGATCTCTCCTGGCCGGAGCGGCTGGTGCTGGCC‑AAAAGCTGCGGGTTCT‑CTTTTGTCGAAATGTCGGTGGGTGAAACCGACGACAGGCTCTCACGTCTTGCCTTGAGCGCCGCGCCAAgcatgttgct > 2:200597/1‑227 (MQ=255) gcgcAAGTGGCTGGCGATTTCCATGCGCAAATCGACGCTATCTGGGGAGGTGCGCGTGCGTAATCATCAGTTAGGGATTTATGAAAAAGCGCTGGCGAAAGATCTCTCCTGGCCGGAGCGGCTGGTGCTGGCA‑AAAAGCTGCGGTTTTG‑CTTTTGTCGAAATGTCGGGGGATGAAACCGACGAACGGCTCTCACGTCTTGACTGGAGAGCCGTACAAAGGACTTCGCTGG‑TTGCcg > 1:716906/1‑236 (MQ=255) gcgcAAGTGGCTGGCGATTTCCATGCGCAAATCGACGCTATCTGGGGAGGTGCGCGTGCGTAATCATCAGTTAGGGATTTATGAAAAAGCGCTGGCGAAAGATCTCTCCTGGCCGGAGCGGCTGGTGCTGGCA‑AAAAGCTGCGGGTTTG‑CTTTTGTCGAAATGTCGGTGGATGAAAACGACGAACGGCCCTCACGGCTTGACTGGGAGGCCGGCCCAAGGGCTTCGCCGG‑TTGCcg > 2:72043/1‑236 (MQ=255) gctggcGATTTCCATGCGCAAATCGACGCTATCTGGGGAGGTGCGCGTGCGTAATCATCAGTTAGGGATTTATGAAAAAGCGCTGGCGAAAGATCTCTCCTGGCCGGAGCGGCTGGTGCTGGCA‑AAAAGCTGCGGTTTTG‑CTTTTGTCGAAATGTCGGGGGGTGAAACCGACGGAAGGGCCTTCCGGCTTGACTGGGGTGCCGCACAAAGGACTTGCCTGA‑GTGCcgccgtggttg > 2:505107/1‑228 (MQ=255) gctaTTTCCATGCGCAAATCGACGCTATCTGGGGAGGTGCGCGTGCGTAATCATCAGTTAGGGATTTATGAAAAAGCGCTGGCGAAAGATCTCTCCTGGCCGGAGCGGCTGGTGCTGGCA‑AAAAGCTGCGGTTTTG‑CTTTTGTCGAAATGTCGGTGGATGAAACCGACGAACGGCTCTCACGTCTTGACTGGAGCGCCGCACAAAGGACTTCGCTGG‑TTGCCGCGATGATCGaaa < 1:113937/232‑1 (MQ=255) gcgcAAATCGACGCTATCTGGGGAGGTGCGCGTGCGTAATCATCAGTTAGGGATTTATGAAAAAGCGCTGGCGAAAGATCTCTCCTGGCCGGAGCGGCTGGTGCTGGCA‑AAAAGCTGCGGTTTTG‑CTTTTGTCGAAATGTCGGTGGATGAAACCGACGAACGGCTCTCACGTCTTGACTGGAGTGCCGCACAAAGGACTTCGCTGG‑TTGCCGCGATGATCGAAACAGGTGTTGGGa < 1:505107/236‑1 (MQ=255) aTCGACGCTATCTGGGGAGGTGCGCGTGCGTAATCATCAGTTAGGGATTTATGAAAAAGCGCTGGCGAAAGATCTCTCCTGGCCGGAGCGGCTGGTGCTGGCA‑AAAAGCTGCGGTTTTG‑CTTTTGTCGAAATGTCGGTGGATGAAACCGACGAACGGCTCTCACGTCTTGACTGGAGCGCCGCACAAAGGACTTCGCTGG‑TTGCCGCGATGATCGAAACAGGGGTTGGGATCCCGt > 1:234327/1‑236 (MQ=255) tATCTGGGGAGGTTCGCGTGCGTAATCATCAGTTAGGGATTTATGAAAAAGCGCTGGCGAAAGATCTCTCCTGGCCGGAGCGGCTGGTGCTGGCA‑AAAAGCTGCGGTTTTG‑CTTTTGTCGAAATGTCGGTGGATGAAACCGACGAACGGCTCTCACGTCTTGACTGGAGCGCCGCACAAAGGACTTCGCTGG‑TTGCCGCGATGATCGAAACAGGTGTTGGGATCCCGTC‑GAtgtg < 2:60714/235‑1 (MQ=255) tATCTGGGGAGGTGCGCGTGCGTAATCATCAGTTAGGGATTTATGAAAAAGCGCTGGCGAAAGATCTCTCCTGGCCGGAGCGGCTGGTGCTGGCA‑AAAAGCTGCGGTTTTG‑CTTTTGTCGAAATGTCGGTGGATGAAACCGACGAACGGCTCTCACGTCTTGACTGGAGCGCCGCACAAAGGACTTCGCTGG‑TTGCCGCGATGATCGAAACAGGTGTTGGGATCCCGTC‑GAtgtg < 1:569735/235‑1 (MQ=255) tATCTGGGGAGGTGCGCGTGCGTAATCATCAGTTAGGGATTTATGAAAAAGCGCTGGCGAAAGATCTCTCCTGGCCGGAGCGGCTGGTGCTGGCA‑AAAAGCTGCGGTTTTG‑CTTTTGTCGAAATGTCGGTGGATGAAACCGACGAACGGCTCTCACGTCTTGACTGGAGCGCCGCACAAAGGACTTCGCTGG‑TTGCCGCGATGATCGAAACAGGTGTTGGGATCCCGTC‑GAtgtg < 1:207628/235‑1 (MQ=255) tCTGGGGAGGTGCGCGTGCGTAATCATCAGTTAGGGATTTATGAAAAAGCGCTGGCGAAAGATCTCTCCTGGCCGGAGCGGCTGGTGCTGGCA‑AAAAGCTGCGGTTTTG‑CTTTTGTCGAAATGTCGGTGGATGAAACCGACGAACGGCtctc < 1:241520/152‑1 (MQ=255) tCTGGGGAGGTGCGCGTGCGTAATCATCAGTTAGGGATTTATGAAAAAGCGCTGGCGAAAGATCTCTCCTGGCCGGAGCGGCTGGTGCTGGCA‑AAAAGCTGCGGTTTTG‑CTTTTGTCGAAATGTCGGTGGATGAAACCGACGAACGGCtctc > 2:241520/1‑152 (MQ=255) gggggAGGTGCGCGTGCGTAATCATCAGGTAGGGAGTTATGAAAAAGCGCTGGCGAAAGATCTCTCCTGGCCGGAGCGGCTGGTGCTGGCA‑AAAAGCTGCGGTTTTG‑CTTTTGTCGAAATGTCGGTGGATGAAACCGACGAACGGCTCTCACGTCTTGACTGGAGCGCCGCACAAAGGACTTCGCTGG‑TTGCCGCGATGATCGAAACAGGTGTTGGGATCCCGTC‑GAtgtg < 1:200597/230‑1 (MQ=255) gAGGTGCGCGTGCGTAATCATCAGTTAGGGATTTATGAAAAAGCGCTGGCGAAAGATCTCTCCTGGCCGGAGCGGCTGGTGCTGGCA‑AAAAGCTGCGGTTTTG‑CTTTTGTCGAAATGTCGGTGGATGAAACCGACGAACGGCTCTCACGTCTTGACTGGAGCGCCGCACAAAGGACTTCGCTGG‑TTGCCGCGCTGATCGAAACAGGGGTTGGGATCCCGTC‑GATGTGCCTGTCCGc > 1:235383/1‑236 (MQ=255) aGGTGCGCGTGCGTAATCATCAGTTAGGGATTTATGAAAAAGCGCTGGCGAAAGATCTCTCCTGGCCGGAGCGGCTGGTGCTGGCA‑AAAAGCTGCGGTTTTG‑CTTTTGTCGAAATGTCGGTGGATGAAACCGACGAACGGCTCTCACGTCTTGACTGGAgcg < 2:553337/162‑1 (MQ=255) aGGTGCGCGTGCGTAATCATCAGTTAGGGATTTATGAAAAAGCGCTGGCGAAAGATCTCTCCTGGCCGGAGCGGCTGGTGCTGGCA‑AAAAGCTGCGGTTTTG‑CTTTTGTCGAAATGTCGGTGGATGAAACCGACGAACGGCTCTCACGTCTTGACTGGAgcg > 1:553337/1‑162 (MQ=255) tGCGCGTGCGTAATCATCAGTTAGGGATTTATGAAAAAGCGCTGGCGAAAGATCTCTCCTGGCCGGAGCGGCTGGTGCTGGCC‑AAAAGCTGCGGTTTTG‑CTTTTGTCGAAATGTCGGTGGATGAAACCGACGAACCGCTCTCAAGTCTTGACTGGAGCGCCTCACAAAGGACTTCGCTGGCTTCCCGC‑ATGACCGGAACAGGGGTTTGGATCCCATCACATGT‑CCTGTCCGcaca > 2:338194/1‑235 (MQ=255) tGCGCGTGCGTAATCATCAGTTAGGGATTTATGAAAAAGCGCTGGCGAAAGATCTCTCCTGGCCGGAGCGGCTGGTGCTGGCA‑AAAAGCTGCGGTTTTG‑CTTTTGTCGAAATGTCGGTGGATGAAACCGACGAACGGCTCTCACGTCTTTACTGGAGCGCCGCACAAAGGACTTCGCTGG‑TTGCCGCGATGAACGAAACAGGTGTTGGGATCCCGTG‑CACGTGCCTGTCCGtacac > 2:634604/1‑235 (MQ=255) tGCGCGTGCGTAATCATCAGTTAGGGATTTATGAAAAAGCGCTGGCGAAAGATCTCTCCTGGCCGGAGCGGCTGGTGCTGGCA‑AAAAGCTGCGGTTTTG‑CTTTTGTCGAAATGTCGGTGGATGAAACCGACGAACGGCTCTCACGTCTTGACTGGAGCGCCGCCCAAAGGACTTCGCTGG‑TTGCCGCGATGATCGGAAACGGTGTTCGGATCCCGTC‑GATGTGCCTGTCCGCACAt > 2:256650/1‑236 (MQ=255) tGCGCGTGCGTAATCATCAGTTAGGGATTTATGAAAAAGCGCTGGCGAAAGATCTCTCCTGGCCGGAGCGGCTGGTGCTGGCA‑AAAAGCTGCGGTTTTG‑CTTTTGTCGAAATGTCGGTGGATGAAACCGACGAACGGCTCTCACGTCTTGACTGGAGCGCCGCACAAAGGACTTCGCTGG‑TTGCCGCGATGATCGAAACAGGTGTTGGGATcc > 1:1432/1‑213 (MQ=255) tGCGCGTGCGTAATCATCAGTTAGGGATTTATGAAAAAGCGCTGGCGAAAGATCTCTCCTGGCCGGAGCGGCTGGTGCTGGCA‑AAAAGCTGCGGTTTTG‑CTTTTGTCGAAATGTCGGTGGATGAAACCGACGAACGGCTCTCACGTCTTGACTGGAGCGCCGCACAAAGGACTTCGCTGG‑TTGCCGCGATGATCGAAACAGGTGTTGGGATcc < 2:1432/213‑1 (MQ=255) tGCGCGTGCGTAATCATCAGTTAGGGATTTATGAAAAAGCGCTGGCGAAAGATCTCTCCTGGCCGGAGCGGCTGGTGCTGGCA‑AAAAGCTGCGGTTTTG‑CTTTTGTCGAAATGTCGGTGGATGAAACCGACGAACGGCTCTCACGTCTTGACTGGAGCGCCGCACAAAGGACTTCGCTGG‑TTGCCGCGATGATCGAAACAGGGGTTGGGATCCCTTC‑GATGGGCCTGTCCGcaca > 1:698704/1‑235 (MQ=255) tGCGCGTGCGTAATCATCAGTTAGGGATTTATGAAAAAGCGCTGGCGAAAGATCTCTCCTGGCCGGAGCGGCTGGTGCTGGCA‑AAAAGCTGCGGTTTTG‑CTTTTGTCGAAATGTCGGTGGATGAAACCGACGAACGGCTCTCACGTCTTGACGTGAGCGCCGCCCAAAGGACTTCGCTGG‑GTGCCGCGATGGTCGAAACAGGGGTTGGGATCCCGTC‑GATGGTCCTggtcgcgca > 2:643202/1‑227 (MQ=255) cgcgTGCGTAATCATCAGTTAGGGATTTATGAAAAAGCGCTGGCGAAAGATCTCTCCTGGCCGGAGCGGCTGGTGCTGGCA‑AAAAGCTGCGGTTTTG‑CTTTTGTCGAAATGTCGGTGGATGAAACCGACGAACGGCTCTCACGTCTTGACTGGAGCGCCGCACAAAGGACTTCGCTGG‑TTGCCGCGATGATCGAAACAGGTGTTGGGATCCCGTC‑GATGTGc < 1:356456/222‑1 (MQ=255) cgcgTGCGTAATCATCAGTTAGGGATTTATGAAAAAGCGCTGGCGAAAGATCTCTCCTGGCCGGAGCGGCTGGTGCTGGCA‑AAAAGCTGCGGTTTTG‑CTTTTGTCGAAATGTCGGTGGATGAAACCGACGAACGGCTCTCACGTCTTGACTGGAGCGCCGCACAAAGGACTTCGCTGG‑TTGCCGCGATGATCGAAACAGGTGTTGGGATCCCGTC‑GATGTGc > 2:356456/1‑222 (MQ=255) cgcgTGCGTAATCATCAGTTAGGGATTTATGAAAAAGCGCTGGCGAAAGATCTCTCCTGGCCGGAGCGGCTGGTGCTGGCA‑AAAAGCTGCGGTTTTG‑CTTTTGTCGAAATGTCGGTGGATGAAACCGACGAACGGCTCTCACGTCTTGACTGGAGCGCCGCACAAAGGACTTCGCTGG‑TTGCCGCGATGATCGAAACAGGTGTTGGGATCCCGTC‑GATGTGCCTGTCCGCACAtc < 1:219743/235‑1 (MQ=255) cgtgcgtAATCATCAGTTAGGGATTTATGAAAAAGCGCTGGCGAAAGATCTCTCCTGGCCGGAGCGGCTGGTGCTGGCA‑AAAAGCTGCGGTTTTG‑CTTTTGTCGAAATGTCGGTGGATGAAACCGACGAACGGCTCTCACGTCTTGACTGGAGCGCCGCACAAAGGACTTCGCTGG‑TTGCCGCGATGATCGAAACAGGTGTTGGGATCCCGTC‑GATGTGCCTGTCCGCACAtcgtc > 1:421086/1‑236 (MQ=255) gcgtAATCATCAGTTAGGGATTTATGAAAAAGCGCTGGCGAAAGATCTCTCCTGGCCGGAGCGGCTGGTGCTGGCA‑AAAAGCTGCGGTTTTG‑CTTTTGTCGAAATGTCGGTGGATGAAACCGACGAACGGCTCTCACGTCTTGACTGGAGCGCCGCACAAAGGACTTCGCTGG‑TTGCCGCGATGATCGAAACAGGTGTTGGGATCCCGTC‑GATGTGCCTGTCCGCACATCGTCGc < 2:596321/235‑1 (MQ=255) gtAATCATCAGTTAGGGATTTATGAAAAAGCGCTGGCGAAAGATCTCTCCTGGCCGGAGCGGCTGGTGCTGGCA‑AAAAGCTGCGGTTTTG‑CTTTTGTCGAAATGTCGGTGGATGAAACCGACGAACGGCTCTCACGTCTTGACTGGAGCGCCGCACAAAGGACTTCGCTGG‑TTGCCGCGATGATCGAAACAGGTGTTGGGATCCCGTC‑GATGTGCCTGTCCGCACAtc > 1:118354/1‑228 (MQ=255) tAATCATCAGTTAGGGATTTATGAAAAAGCGCTGGCGAAAGATCTCTCCTGGCCGGAGCGGCTGGTGCTGGCA‑AAAAGCTGCGGTTTTG‑CTTTTGTCGAAATGTCGGTGGATGAAACCGACGAACGGCTCTCACGTCTTGACTGGAGCGCCGCACAAAGGACTTCGCTGG‑TTGCCGCGATGATCGAAACAGGGGTTGGGATCCCGTC‑GATGTGCCTGTCCGCACAtc > 1:736811/1‑227 (MQ=255) tcatcaGTTAGGGATTTATGAAAAAGCGATTGCGAAAGATCTCCCCTGGCCGGAGCGGCTGGTGCTGGCA‑AAAAGCTGCGGTTTTG‑CTTTTGTCGAAATGTCGGTGGATGAAACCGACGAACGGCTCTCACGTCTTGACTGGAGCGCCGCACAAAGGACTTCGCTGG‑TTGCCGCGATGATCGAAACAGGTGTTGGGATCCCGTC‑GATGTGCCTGTCCGca < 2:334821/220‑1 (MQ=255) caGTTAGGGATTTATGAAAAAGCGCTGGCGAAAGATCTCTCCTGGCCGGAGCGGCTGGTGCTGGCA‑AAAAGCTGCGGTTTTG‑CTTTTGTCGAAATGTCGGTGGATGAAACCGACGAACGGCTCTCACGTCTTGACTGGAGCGCCGCACAAAGGACTTCGCTGG‑TTGCCGCGATGATCGAAACAGGGGTTGGGATCCCGTC‑GATGTGCCTGTCCGCACATCGTCGCTTTCCCTTTg > 1:704272/1‑235 (MQ=255) ttAGGGATTTATGAAAAAGCGCTGGCGAAAGATCTCTCCTGGCCGGAGCGGCTGGTGCTGGCA‑AAAAGCTGCGGTTTTG‑CTTTTGTCGAAATGTCGGTGGATGAAACCGACGAACGGCTCTCACGTCTTGACTGGAGCGCCGCACAAAGGACTTCGCTGG‑TTGCCGCGATGATCGAAACAGGGGTTGGGATCCCGTC‑GATGATCCTGTCCGCACAtcgtc > 1:334821/1‑220 (MQ=255) tgATTTATGAATAAGCGCTGGCGAAAGATCTCTCCTGGCCGGAGCGGCTGGTGCTGGCA‑AAAAGCTGCGGTTTTG‑CTTTTGTCGAAATGTCGGTGGATGAAACCGACGAACGGCTCTCACGTCTTGACTGGAGCGCCGCACAAAGGACTTCGCTGG‑TTGCCGCGATGATCGAAACAGGTGTTGGGATCCCGTC‑GATGTGCCTGTCCGCACATCGTCGCTTTCCCTTTGGTAGc < 1:256650/232‑1 (MQ=255) aTGAAAAAGCGCTGGCGAAAGATCTCTCCTGGCCGGAGCGGCTGGTGCTGGCA‑AAAAGCTGCGGTTTTG‑CTTTTGTCGAAATGTCGGTGGATGAAACCGACGAACGGCTCTCACGTCTTGACTGGAGCGCCGCACCAAGGACTTCGCTGG‑TTGCCGCGATGATCGAAACAGGTGTTGGGATCCCGTC‑GATGTGCCTGTCCGCACATCGTCGCTTTCCCTTTGGTAGCCGTGACGAg > 1:26637/1‑236 (MQ=255) aTGAAAAAGCGCTGGCGAAAGATCTCTCCTGGCCGGAGCGGCTGGTGCTGGCA‑AAAAGCTGCGGTTTTG‑CTTTTGTCGAAATGTCGGTGGATGAAACCGACGAACGGCTCTCACGTCTTGACTGGAGCGCCGCACAAAGGACTTCGCTGG‑TTGCCGCGATGATCGAAACAGGTGTTGGGATCCCGTC‑GATGTGCCTGTCCGCACATCGTCGCTTTCCCTTTGGTAGCCGTGACGAg > 1:748840/1‑236 (MQ=255) aTGAAAAAGCGCTGGCGAAAGATCTCTCCTGGCCGGAGCGGCTGGTGCTGGCA‑AAAAGCTGCGGTTTTG‑CTTTTGTCGAAATGTCGGTGGATGAAACCGACGAACGGCTCTCACGTCTTGACTGGAGCGCCGCACAAAGGACTTCGCTGG‑TTGCCGCGATGATCGAAACAGGTGTTGGGATCCCGTC‑GATGTGCCTGGCCGCACATCGTGGCTTTCCCTTTGGTATCCCGGACGAg > 1:392038/1‑236 (MQ=255) aTGAAAAAGCGCTGGCGAAAGATCTCTCCTGGCCGGAGCGGCTGGTGCTGGCA‑AAAAGCTGCGGTTTTG‑CTTTTGTCGAAATGTCGGCGGATGAAACCGACGAACGGCCCTCACGTCTTGACTGGAGCGCCGCACAAAGGACTTCGCTGG‑TTGCCGCGATGATCGTAACAGGTGTTGGGATCCCGTC‑GATGGGCCTGTCCGCACATCGTCGCTTTCCCTTTGGTAGCCGTGActcg > 2:633482/1‑233 (MQ=255) aaaGCGCTGGCGAATGATCTCTCCTGGCCGGAGCGGCTGGTGCTGGCA‑AAAAGCTGCGGTTTTG‑CTTTTGTCGAAATGTCGGTGGATGAAACCGACGAACGGCTCTCACGTCTTGACTGGAGCGCCGCACAAAGGACTTCGCTGG‑TTGCCGCGATGATCGAAACAGGTGTTGGGATCCCGTC‑GATGTTCCTGTTCGCAGCTCGTCGCTTTCCCCTTGGTTGCCGtcaggcgtgcg > 2:385237/1‑225 (MQ=255) aaaGCGCTGGCGAAAGATCTCTCCTGGCCGGAGCGGCTGGTGCTGGCA‑AAAAGCTGCGGTTTTG‑CTTTTGTCGAAATGTCGGTGGATGAAACCGACGAACGGCTCTCACGTCTTGACTGGAGCGCCGCACAAAGGACTTCGCTGG‑TTGCCGCGATGATCGAAACAGGGGTTGGGATCCCGTC‑GATGTGCCTGTCCGCACATCGTCGCTTTCCCTTTGGTAGCCGTGACGAGGCAg > 1:584551/1‑235 (MQ=255) aaaGCGCTGGCGAAAGATCTCTCCTGGCCGGAGCGGCTGGTGCTGGCA‑AAAAGCTGCGGTTTTG‑CTTTTGTCGAAATGTCGGTGGATGAAACCGACGAACGGCTCTCACGTCTTGACTGGAGCGCCGCACAAAGGACTTCGCTGG‑TTGCCGCGATGATCGAAACAGGGGTTGGGATCCCGTC‑GATGTGCCTGTCCGCACATCGTCGCTTTCCCTTTGGTAGCCCTGACGAGGCAg > 1:120701/1‑235 (MQ=255) tctctcCTGGCCGGAGCGGCTGGTGCTGGCA‑AAAAGCTGCGGTTTTG‑CTTTTGTCGAAATGTCGGTGGATGAAACCGACGAACGGCTCTCACGTCTTGACTGGAGCGCCGCACAAAGGACTTCGCTGG‑TTGCCGCGATGATCGAAACAGGTGTTGGGATCCCGTC‑GATGTGCCTGTCCGCACATCGTCGCTTTCCCTTTGGTAGCCGTGACGAGGCAGTGCGCGAACGGGCGCggg < 1:633482/236‑1 (MQ=255) tctctcCTGGCCGGAGCGGCTGGTGCGGGCA‑AAAAGCTGCGGTTTTG‑CTGTTGTCGAAATGTCGGTGGATGAAACCGACGAACGGCTCTCACGTCTTGACTGGAGCGCCGCACAAAGGACTTCGCTGG‑TTGCCGCGATGATCGAAACAGGTGTTGGGATCCCGTC‑GATGTGCCTGTCCGCACATCGTCGCTTTCCCTTTGGTAGCCGTGACGAGGCAGTGCGCGAACGGGCGCggg < 1:584353/236‑1 (MQ=255) tctcCTGGCCGGAGCGGCTGGTGCTGGCA‑AAAAGCTGCGGTTTTG‑CTTTTGTCGAAATGTCGGTGGATGAAACCGACGAACGGCTCTCACGTCTTGACTGGAGCGCCGCACAAAGGACTTCGCTGG‑TTGCCGCGATGATCGAAACAGGTGTTGGGATCCCGTC‑GATGTGCCTGTCCGCACATCGTCGCTTTCCCTTTGGTAGCCGTGACGAGGCAGTGCGCGAACGGGCGCGGGaa > 1:270167/1‑236 (MQ=255) tctcCTGGCCGGAGCGGCTGGTGCTGGCA‑AAAAGCTGCGGTTTTG‑CTTTTGTCGAAATGTCGGTGGATGAAACCGACGAACGGCTCTCACGTCTTGACTGGAGCGCCGCACAAAGGACTTCGCTGG‑GTGCCGCGATGATCGAAACAGGTGTTGGGATCCCGTC‑GATGGGCCTGTCCGCACATCGTCGCTTTCCCTTTGGTAGCCGTGACGAGGCAGTGCGCGAACGGTGCCGGGaa > 2:587947/1‑236 (MQ=255) ggtcCTGGCCGGAGCAGCTGGTGCTGGCA‑AAAGGCTGCGGTTTTG‑CTTTTGTCGAAATGTCGGTGGATGAAACCGACGAACGGCTCTCACGTCTTGACTGGAGCGCCGCACAAAGGACTTCGCTGG‑TTGCCGCGATGATCGAAACAGGTGTTGGGATCCCGTC‑GATGTGCCTGTCCGCACATCGTCGCTTTCCCTTTGGTAGCCGTGACGAGGCAGTGCGCGAACGGGCGCggg < 2:357800/232‑1 (MQ=255) ccTGGCCGGAGCGGCTGGTGCTGGCA‑AAAAGCTGCGGTTTTG‑CTTTTGTCGAAATGTCGGTGGATGAAACCGACGAACGGCTCTCACGTCTTGACTGGAGCGCCGCACAAAGGACTTCGCTGG‑TTGCCGCGATGATCGAAACAGGTGTTGGGATCCCGTC‑GATGTGCCTGTCCGCACATCGTCGCTTTCCCTTTGGTAGCCGTGACGAGGCAGTGCGCGAACGGGCGCGGGAAATc < 2:270167/236‑1 (MQ=255) ccTGGCCGGAGCGGCTGGTGCTGGCA‑AAAAGCTGCGGTTTTG‑CTTTTGTCGAAATGTCGGTGGATGAAACCGACGAACGGCTCTCACGTCTTGACTGGAGCGCCGCACAAAGGACTTCGCTGG‑TTGCCGCGATGATCGAAACAGGTGTTGGGATCCCGTC‑GATGTGCCTGTCCGCACATCGTCGCTTTCCCTTTGGTAGCCGTGACGAGGCAGTGCGCGAACGGGCGCGGGAAATc < 1:587947/236‑1 (MQ=255) gCCGGAGCGGCTGGTGCTGGCA‑AAAAGCTGCGGTTTTG‑CTTTTGTCGAAATGTCGGTGGATGAAACCGACGAACGGCTCTCACGTCTTGACTGGAGCGCCGCACAAAGGACTTCGCTGG‑TTGCCGCGATGATCGAAACAGGTGTTGGGATCCCGTC‑GATGTGCCTGTCCGCACATCGTCGCTTTCCCTTTGGTAGCCGTGACGAGGCAGTGCGCGAACGGGCGCGGGAAATCATGa > 1:55959/1‑236 (MQ=255) cGGAGCGGCTGGTGCTGGCA‑AAAAGCTGCGGTTTTG‑CTTTTGTCGAAATGTCGGTGGATGAAACCGACGAACGGCTCTCACGTCTTGACTGGAGCGCCGCACAAAGGACTTCGCTGG‑TTGCCGCGATGATCGAAACAGGTGTTGGGATCCCGTC‑GATGTGCCTGTCCGCACATCGTCGCTTTCCCTTTGGTAGCCGTGACGAGGCAGTGCGCGAACGGGCGCGGGAAATCATGAGt > 1:478248/1‑236 (MQ=255) aGCGGCTGGTGCTGGCA‑AAAAGCTGCGGTTTTG‑CTTTTGTCGAAATGTCGGTGGATGAAACCGACGAACGGCTCTCACGTCTTGACTGGAGCGCCGCACAAAGGACTTCGCTGG‑TTGCCGCGATGATCGAAACAGGTGTTGGGATCCCGTC‑GATGTGCCTGTCCGCACATCGTCGCt > 1:466471/1‑177 (MQ=255) aGCGGCTGGTGCTGGCA‑AAAAGCTGCGGTTTTG‑CTTTTGTCGAAATGTCGGTGGATGAAACCGACGAACGGCTCTCACGTCTTGACTGGAGCGCCGCACAAAGGACTTCGCTGG‑TTGCCGCGATGATCGAAACAGGTGTTGGGATCCCGTC‑GATGTGCCTGTCCGCACATCGTCGCt < 2:466471/177‑1 (MQ=255) aGCGGCTGGTGCTGGCA‑AAAAGCTGCGGTTTTG‑CTTTTGTCGAAATGTCGGTGGATGAAACCGACGAACGGCTCTCACGTCTTGACTGGAGCGCCGCACAAAGGACTTCGCTGG‑TTGCCGCGATGATCGAAACAGGTGTTGGGATCCCGTC‑GATGTGCCTGTCCGCACATCGTCGCTTTCCCTTTGGTAGc > 1:491763/1‑191 (MQ=255) aGCGGCTGGTGCTGGCA‑AAAAGCTGCGGTTTTG‑CTTTTGTCGAAATGTCGGTGGATGAAACCGACGAACGGCTCTCACGTCTTGACTGGAGCGCCGCACAAAGGACTTCGCTGG‑TTGCCGCGATGATCGAAACAGGTGTTGGGATCCCGTC‑GATGTGCCTGTCCGCACATCGTCGCTTTCCCTTTGGTAGc < 2:491763/191‑1 (MQ=255) cTGGCA‑AAAAGCTGCGGTTTTG‑CTTTTGGCGAAATGTCGGTGGATGAAACCGACGAACGGCTCTCACGTCTTGACTGGAGCGCCGCACAAAGGACTTCGCTGG‑TTGCCGCGATGATCGAAACAGGTGTTGGGATCCCGTC‑GATGTGCCTGTCCGCACATCGTCGCTTTCCCTTTGGTAGCCGTGACGAGGCAGTGCGCGAACGGGCGCGGGAAATCATGAGTAAAGCGATTCGCCt < 1:565071/236‑1 (MQ=255) gtagttGCGGTTTTG‑CTTTTGTCGAAATGTCGGTGGATGAACCCGACGAACGGCTCTCACGTCTTGACTGGAGCGCCGCACAAAGGACTTCGCTGG‑TTGCCGCGATGATCGAAACAGGTGTTGGGATCCCGTC‑GATGTGCCTGTCCGCACATCGTCGCTTTCCCTTTGGTAGCCGTGACGAGGCAGTGCGCGAACGGGCGCGGGAAATCATGAGTAAAGCGATTCGCCTGgcgcg < 2:478248/230‑1 (MQ=255) ggTTTGG‑ATTTTGACGGATTGTCGGTGAATGAAACCGACGAACGGCTCTCACGTCTTGACTGGAGCGCCGCACAAAGGACTTCGCTGG‑TTGCCGCGATGATCGAAACAGGTGTTGGGATCCCGTC‑GATGTGCCTGTCCGCACATCGTCGCTTTCCCTTTGGTAGCCGTGACGAGGCAGTGCGCGAACGGGCGCGGGAAATCATGAGTAAAGCGATTCGCCTGGCGCGCGAtctc < 2:118354/234‑1 (MQ=255) ttG‑CTTTTGTCGAGATGTCGGTGGATGAAACCGACGAACGGCTCTCACGTCTTGACTGGATCGCCGCACAAAGGACTTCGCTGG‑TTGCCGCGATGATCGAAACAGGTGTTGGGATCCCGTC‑GATGTGCCTGTCCGCACATCGTCGCTTTCCCTTTGGTAGCCGTGACGAGGCAGTGCGCGAACGGGCGCGGGAAATCATGAGTAAAGCGATTCGCCTGGCGCGCGATCTCGGCAt < 1:611479/235‑1 (MQ=255) | CCCCTGCTGACCTGCCGCTGTTTAAAGATATCCGCGTGAAAGCGTTTATTGCCGGGCGGGCACTGGCAGGCGCGGCAAATCCGGCGCAAGTGGCTGGCGATTTCCATGCGCAAATCGACGCTATCTGGGGAGGTGCGCGTGCGTAATCATCAGTTAGGGATTTATGAAAAAGCGCTGGCGAAAGATCTCTCCTGGCCGGAGCGGCTGGTGCTGGCA‑AAAAGCTGCGGTTTTG‑ATTTTGTCGAAATGTCGGTGGATGAAACCGACGAACGGCTCTCACGTCTTGACTGGAGCGCCGCACAAAGGACTTCGCTGG‑TTGCCGCGATGATCGAAACAGGTGTTGGGATCCCGTC‑GATGTGCCTGTCCGCACATCGTCGCTTTCCCTTTGGTAGCCGTGACGAGGCAGTGCGCGAACGGGCGCGGGAAATCATGAGTAAAGCGATTCGCCTGGCGCGCGATCTCGGCAT > NC_000913/3749094‑3749557 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |