| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 2,185,875 | (G)7→8 | intergenic (‑79/‑42) | rcnR ← / → rcnA | transcriptional repressor of rcnA/membrane protein conferring nickel and cobalt resistance |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,185,868 | 1 | . | G | 90.2% | 327.4 / 28.4 | 103 | intergenic (‑72/‑49) | rcnR/rcnA | transcriptional repressor of rcnA/membrane protein conferring nickel and cobalt resistance |
| Reads supporting (aligned to +/- strand): ref base . (4/6); new base G (88/4); total (92/11) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.83e-05 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 129 total aligned reads displayed.
TCTGTTTATCACGGATTGTATGAGACATGGCAACACCTGGTTAACAAGAATATGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGTACT‑GG‑G‑GG‑GG‑AGTAGAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAATTTACAACTCTTCTTCAGCAAGGAAACGCCTGGTTCTTCA > NC_000913/2185769‑2185965 | tCTGTTTATCACGGATTGTATGAGACATGGCAACACCTGGTGAACAAGAATTTGATAAATCATAGCACTATTAATCTACTGGGGGATAGTATCAGGTACt < 1:4892414/100‑1 (MQ=255) cTGTTTATCACGGATTGTATGAGACATGGCAACACCTGGTTAACAAGAATATGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGTACT‑g < 1:1509585/100‑1 (MQ=255) tGTTTATCACGGATTGTATGAGACATGGCAACACCTGGTTAACAAGAATATGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGTACT‑gg > 2:4783653/1‑100 (MQ=255) tGTTTATCACGGATTGTATGAGACATGGCAACACCTGGTTAACAAGAATATGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGTACT‑gg < 2:2821435/100‑1 (MQ=255) gTTTATCACGGATTGTATGAGACATGGCAACACCTGGTTAACAAGAATATGCAAAATCATAGCACTATTGATCTACTGGGGGGTAGTATCAGGTACT‑gg‑g > 1:5304962/1‑100 (MQ=255) gTTTATCACGGATTGTATGAGACATGGCAACACCTGGTTAACAAGAATATGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGTACT‑gg‑g < 2:3737835/100‑1 (MQ=255) gTTTATCACGGATTGTATGAGACATGGCAACACCTGGTTAACAAGAATATGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGTACT‑gg‑g < 1:2436788/100‑1 (MQ=255) atttAACACGCATTGAATGAGACATGGCAACACCTTGTTAAAAAAAAAAAGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGTACT‑gg‑g < 2:908339/99‑1 (MQ=255) tttATCACGGATTGTATGAGACATGGCAACACCTGGTTAACAAGAATGTGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGTACT‑gg‑g‑g > 2:1557044/1‑100 (MQ=255) tttATCACGGATTGTATGAGACATGGCAACACCTGGTTAACAAAAATATGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGTACT‑gg‑g‑g < 2:3538352/100‑1 (MQ=255) ttATCACGGATTGTATGAGACATGGCAACACCTGGTTAACAAGAATATGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGTACT‑gg‑g‑gg > 1:1319076/1‑100 (MQ=255) ttATCACGGATTGTATGAGACATGGCAACACCTGGTTAACAAGAATATGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGTACT‑gg‑g‑gg < 2:314367/100‑1 (MQ=255) tATCACGGATTGTATGAGACATGGCAACACCTGGTTAACAAGAATATGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGTACT‑gg‑g‑gg‑g > 2:415146/1‑100 (MQ=255) tATCACGGATTGTATGAGACATAGCAACACCTGGTTAACAAGAATATGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGTACT‑gg‑g‑gg‑g < 2:5015847/100‑1 (MQ=255) tATCACGGATTGTATGAGAAATGGCAACACCTGGTTAACAAGAATATGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGTACT‑gg‑g‑gg‑g < 1:4223620/100‑1 (MQ=255) aTCACGGATTGTATGAGACATGGCAACACCTGGTTAACAAGAATATGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGTACT‑gg‑g‑gg‑gg > 2:5378584/1‑100 (MQ=255) cACGGATTGTATGAGACATGGCAACACCTGGTTAACAAGAATATGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGTACT‑gg‑g‑gg‑ggga > 2:5051191/1‑98 (MQ=255) aCGGATTGTATGAGACATGGCAACACCTGGTTAACAAGAATATGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGTACT‑gg‑g‑gg‑gggag > 1:1522292/1‑97 (MQ=255) cGGATTGTATGAGACATGGCAACACCTGGTTAACAAGAATATGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGTACT‑gg‑g‑gg‑gggagt > 1:5571285/1‑96 (MQ=255) ggATTGTATGAGACATGGCAACACCTGGTTAACAAGAATATGAAAAATCATAGCACTATTAATCTTCTGGGGGGTAGTATCAGGTACT‑GG‑G‑GG‑GG‑AGTAg < 2:5290162/100‑1 (MQ=255) ggATTGTATGAGACATGGCAACACCTGGTTAACAAGAATATGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGTACT‑gg‑g‑gg‑gggagta > 1:5015434/1‑95 (MQ=255) gATTGTATGGTACGTGACAACACCTTGTCAACAAGAAGATGAAAAATCATAGCACTATTAAGCTACTGGGGGGAAGTATCTGGTACTGGG‑G‑GG‑GG‑AGTAg < 2:3985126/100‑1 (MQ=255) ttGTATGAGACATGGCAACACCTGGTTAACAAGAATATGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGTACTGGG‑G‑GG‑GG‑AGTAGaa > 2:5480362/1‑100 (MQ=255) gTATGAGACATGGCAACACCTGGTTAACAAGAATATGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGTACTGGG‑G‑GG‑GG‑AGTAGAATc > 2:3191704/1‑100 (MQ=255) gTATGAGACATGGCAACACCTGGTTAACAAGAATATGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGTACTGGG‑G‑GG‑GG‑AGTAGAATc > 2:2243934/1‑100 (MQ=255) tATGAGACATGGCAACACCTGGTTAACAAGAATATGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGTACTGGG‑G‑GG‑GG‑AGTAGAATCa > 1:2665650/1‑100 (MQ=255) aTGAGACATGGCAACACCTGGTTAACAAGAATATGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGTACTGGG‑G‑GG‑GG‑AGTAGAATCAg > 1:962200/1‑100 (MQ=255) tGAGACATGGCAACACCTGGTTAACAAGAATATGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGTACTGGG‑G‑GG‑GG‑CGTAGAATCAGa > 1:2765929/1‑100 (MQ=255) tGAGACATGGCAACACCTGGTTAACAAGAATATGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGTACTGGG‑G‑GG‑GG‑AGTAGAATCAGa > 1:3806055/1‑100 (MQ=255) tGAGACATGGCAACACCTGGTTAACAAGAATATGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGTACTGGG‑G‑GG‑GG‑AGTAGAATCAGa > 1:2837413/1‑100 (MQ=255) gagaCATGGCAACACCTGGTTAACAAGAATATGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGTACTGGG‑G‑GG‑GG‑AGTAGAATCAGAt > 2:1985469/1‑100 (MQ=255) gagaCATGGCAACACCTGGTTAACAAGAATATGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGTACTGGG‑G‑GG‑GG‑AGTAGAATCAGAt > 2:4594636/1‑100 (MQ=255) gagaCATGGCAACACCTGGTTAACAAGAATATGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGTACTGGG‑G‑GG‑GG‑AGTAGAATCAGAt > 1:239261/1‑100 (MQ=255) agaCATGGCAACACCTGGTTAACAAGAATATGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGTACTGGG‑G‑GG‑GG‑AGTAGAATCAGAtt > 1:5168030/1‑100 (MQ=255) cATGGCAACACCTGGTTAACAAGAATATGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGTACTGGG‑G‑GG‑GG‑AGTAGAATCAGATTGcc > 1:4009409/1‑100 (MQ=255) cATGGCAACACCTGGTTAACAAGAATATGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGTACTGGG‑G‑GG‑GG‑AGTAGAATCAGATTGcc > 1:1128172/1‑100 (MQ=255) cATGGCAACACCTGGTTAACAAGAATATGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGTACTGGG‑G‑GG‑GG‑AGTAGAATCAGATTGcc > 2:1401935/1‑100 (MQ=255) aTGGCAACACCTGGTTAACAAGAATATGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGTACTGGG‑G‑GG‑GG‑AGTAGAATCAGATTGCCg > 2:1387481/1‑100 (MQ=255) aTGGCAACACCTGGTTAACAAGAATATGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGTACTGGG‑G‑GG‑GG‑AGCAGAATCAGATTGCCg > 1:5564019/1‑100 (MQ=255) tGGCAACACCTGGTTAACAAGAATATGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGTACTGGG‑G‑GG‑GG‑AGTAGAATCAGATTGCCGa > 1:3714265/1‑100 (MQ=255) agCAAAACCTGGTTAACAAGAGTATGAAAATTCATGCCACTATTAAGCTTCTGGGGGGTAGTATGTGGTAGT‑GG‑G‑GG‑GG‑AGTAGAATCAGATTGCCGAAt < 1:3126276/99‑1 (MQ=255) gCAACACCTGGTTAACAAGAATATGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGTACTGGG‑G‑GG‑GG‑AGTAGAATCAGATTGCCGAAt > 1:1979973/1‑100 (MQ=255) gCAACACCTGGTTAACAAGAATATGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGTACTGGG‑G‑GG‑GG‑AGTAGAATCAGATTGCCGAAt > 1:3904357/1‑100 (MQ=255) cacCTGGTTAACAAGAATATGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGTACTGGG‑G‑GG‑GG‑AGTAGAATCAGATTGCCGAATTAAt > 1:2208095/1‑100 (MQ=255) cacCTGGTTAACAAGAAGATGAAAAATCATATCATTATTATTCTACTGGGGGATAGTATCAGGGACTGGG‑G‑GG‑GG‑AGTAGAATCAGATTGCCGAATTAAt < 2:4348656/100‑1 (MQ=255) ccTGGTTAACAAGAATATGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGTACTGGG‑G‑GG‑GG‑AGTAGAATCAGATTGCCGAATTAATAc > 2:1596671/1‑100 (MQ=255) cTGGTTAACAAGAATATGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGTACTGGG‑G‑GG‑GG‑AGTAGAATCAGATTGCCGAATTAATACt > 2:4245086/1‑100 (MQ=255) cTGGTTAACAAGAATATGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGTACTGGG‑G‑GG‑GG‑AGTAGAATCAGATTGCCGAATTAATACt > 1:2373237/1‑100 (MQ=255) gTTAACAAGAATATGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGTACTGGG‑G‑GG‑GG‑AGTAGAATCAGATTGCCGAATTAATACTAAg > 2:3946984/1‑100 (MQ=255) aCAAGAATATGAAACATCATAGAACTATTAATCTACTGGGGGGTAGTATCAGGTACT‑GG‑G‑GGAGGAAGAAGAATCAGATTGCCGAATTCCTGCTAAAAat > 2:530553/1‑100 (MQ=255) cAAGAATATGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGTACTGGG‑G‑GG‑GG‑AGTAGAATCAGATTGCCGAATTAATACTAAGAatta > 1:5286936/1‑100 (MQ=255) aaGAATATGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGTACTGGG‑G‑GG‑GG‑AGTAGAATCAGATTGCCGAATTAATACTAAGAattat > 1:3010819/1‑100 (MQ=255) aGAATATGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGTACTGGG‑G‑GG‑GG‑AGTAGAATCAGATTGCCGAATTAATACTAAGAattatt > 2:1830506/1‑100 (MQ=255) aGAATATGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGTACTGGG‑G‑GG‑GG‑AGTAGAATCAGATTGCCGAATTAATACTAAGAattatt > 1:994531/1‑100 (MQ=255) aGAATATGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGTACTGGG‑G‑GG‑GG‑AGTAGAATCAGATTGCCGAATTAATACTAAGAattatt > 2:2902402/1‑100 (MQ=255) aGAATATGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGTACTGGG‑G‑GG‑GG‑AGTAGAATCAGATTGCCGAATTAATACTAAGAattatt > 2:4292794/1‑100 (MQ=255) agatGAAAAATCATAGTACTAGTAGCGGAAGTGGGGTTAGTATCAGGTACTAGG‑G‑GG‑GG‑AGTAGAATCAGATTGCCGAATTAATACTAAGAATTATTATc < 2:1545403/98‑1 (MQ=255) tGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGTACTGGG‑G‑GG‑GG‑AGTAGAATCAGATTGCCGAATTAATACTAAGAATTATTATCATg < 1:843480/100‑1 (MQ=255) gAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGTACTGGG‑G‑GG‑GG‑AGTAGAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGa > 1:1817286/1‑100 (MQ=255) aaaaaTCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGTACTGGG‑G‑GG‑GG‑AGTAGAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGAc > 2:3897017/1‑100 (MQ=255) aTAGCACTATTAATCTACTGGGGGGTATTATCAGGTACTGGG‑G‑GG‑GG‑AGTAGAATCAGAGTGCCGAATTAATACTAAGAATTATTATCATGACCGAAttt > 1:4914565/1‑100 (MQ=255) aTAGCACTATTAATCTACTGGGGGGTAGTATCAGGTACTGGG‑G‑GG‑GG‑AGTAGAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAAttt > 1:1964471/1‑100 (MQ=255) aTAGCACTATTAATCTACTGGGGGGTAGTATCAGGTACTGGG‑G‑GG‑GG‑AGTAGAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAAttt > 2:1980612/1‑100 (MQ=255) tAGCACTATTAATCTACTGGGGGGTAGTATCAGGTACTGGG‑G‑GG‑GG‑AGTAGAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAATTTa > 2:670871/1‑100 (MQ=255) gCACTATTAATCTACTGGGGGGTAGTATCAGGTACTGGG‑G‑GG‑GG‑AGTAGAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAATTTACa > 1:3291937/1‑100 (MQ=255) cACTATTAATCTACTGGGGGGTAGTATCAGGTACTGGG‑G‑GG‑GG‑AGTAGAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAATTTACaa > 2:862681/1‑100 (MQ=255) aCTATTAATCTACTGGGGGGTAGTATCAGGTACTGGG‑G‑GG‑GG‑AGTAGAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAATTTACAAc > 2:1826497/1‑100 (MQ=255) cTATTAATCTACTGGGGGGTAGTATCAGGTACTGGG‑G‑GG‑GG‑AGTAGAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAATTTACAAct > 1:4041883/1‑100 (MQ=255) cTATTAATCTACTGGGGGGTAGTATCAGGTACTGGG‑G‑GG‑GG‑AGTAGAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAATTTACAAct > 2:49603/1‑100 (MQ=255) tATTAATCTACTGGGGGGTAGTATCAGGTACTGGG‑G‑GG‑GG‑AGTAGAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAATTTACAActc > 1:1084946/1‑100 (MQ=255) aTTAATCTACTGGGGGGTAGTATCAGGTACTGGG‑G‑GG‑GG‑AGTAGAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAATTTACAActct > 2:2170135/1‑100 (MQ=255) aTCTACTGGGGGGTAGTATCAGGTACTGGG‑G‑GG‑GG‑AGTAGAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAATTTACAACTcttctt > 2:5397912/1‑100 (MQ=255) aTCTACTGGGGGGTAGTATCAGGTACTGGG‑G‑GG‑GG‑AGTAGAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAATTTACAACTcttctt > 2:3989228/1‑100 (MQ=255) aTCTACTGGGGGGTAGTATCAGGTACTGGG‑G‑GG‑GG‑AGTAGAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAATTTACAACTcttctt > 1:1640877/1‑100 (MQ=255) tACTGGGGGGTAGTATCAGGTACTGGG‑G‑GG‑GG‑AGTAGAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAATTTACAACTCTTCTTCAg > 2:3668071/1‑100 (MQ=255) cTGGGGGGTAGTATCAGGTACTGGG‑G‑GG‑GG‑AGTAGAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAATTTACAACTCttcttcttgt > 1:1049311/1‑96 (MQ=255) tGGGGGGTAGTATCAGGTACTGGG‑G‑GG‑GG‑AGTAGAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAATTTACAACTCTTCTTCAGCaa > 1:675936/1‑100 (MQ=255) gggggTAGTATCAGGTACTGGG‑G‑GG‑GG‑AGTAGAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAATTTACAACTCTTCTTCAGCAAgg > 1:4553254/1‑100 (MQ=255) ggggTAGTATCAGGTACTGGG‑G‑GG‑GG‑AGTAGAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAATTTACAACTCTTCTTCAGCAAGGa > 2:3164629/1‑100 (MQ=255) cggttagttTCAAGTACA‑GG‑GTGG‑TA‑AGTAGAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAATTTACAACTCTTCTTCAGCAAGGa < 2:1243275/96‑1 (MQ=255) gggTAGTATCAGGTACTGGG‑G‑GG‑GG‑AGTAGAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAATTTACAACTCTTCTTCAGCAAGGaa > 2:1856844/1‑100 (MQ=255) gggTAGTATCAGGTACT‑GGTG‑GG‑GG‑CGTAGAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAATTTACAACTCATCTTCAGCAAGGaa > 2:5024930/1‑100 (MQ=255) gtagtaTCAGGTACTGGG‑G‑GG‑GG‑AGTAGAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAATTTACAACTCTTCTTCAGCAAGGAAAc > 2:4012551/1‑100 (MQ=255) agtaTCAGGTACTGGG‑G‑GG‑GG‑AGTAGAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAATTTACAACTCTTCTTCAGCAAGGAAACGc > 2:2060869/1‑100 (MQ=255) gtaTCAGGTACTGGG‑G‑GG‑GG‑AGTAGAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAATTTACAACTCTTCTTCAGCAAGGAAACGcc > 2:1181638/1‑100 (MQ=255) gtaTCAGGTACTGGG‑G‑GG‑GG‑AGTAGAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAATTTACAACTCTTCTTCAGCAAGGAAACGcc > 1:1949084/1‑100 (MQ=255) taTCAGGTACTGGG‑G‑GG‑GG‑AGTAGAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAATTTACAACTCTTCTTCAGCAAGGAAACGCCt > 2:783683/1‑100 (MQ=255) aTCATGTACTGGG‑G‑GG‑GG‑AGTAGAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAATTTACAACTCTTCTTCAGCAAGGAAACGCCTg > 1:2718333/1‑100 (MQ=255) aTCAGGTACTGGG‑G‑GG‑GG‑AGTAGAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAATTTACAACTCTTCTTCAGCAAGGAAACGCCTg > 2:3501029/1‑100 (MQ=255) aTCAGGTACTGGG‑G‑GG‑GG‑AGTAGAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAATTTACAACTCTTCTTCAGCAAGGAAACGCCTg > 2:3380239/1‑100 (MQ=255) tCAGGTACTGGG‑G‑GG‑GG‑AGTAGAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAATTTACAACTCTTCTTCAGCAAGGAAACGCCTgg > 2:2412626/1‑100 (MQ=255) cAGGTACTGGG‑G‑GG‑GG‑AGTAGAATCGGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAATTTACAACTCTTCTTCAGCAAGGAAACGCCTGGt > 2:74173/1‑100 (MQ=255) cAGGTACTGGG‑G‑GG‑GG‑AGTAGAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAATTTACAACTCTTCTTCAGCAAGGAAACGCCTGGt > 1:1222756/1‑100 (MQ=255) cAGGTACTGGG‑G‑GG‑GG‑AGTAGAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAATTTACAACTCTTCTTCAGCAAGGAAACGCCTGGt > 2:2923108/1‑100 (MQ=255) aGGTACTGGG‑G‑GG‑GG‑AGTAGAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAATTTACAACTCTTCTTCAGCAAGGAAACGCCTGGtt > 2:2543883/1‑100 (MQ=255) aGGTACTGGG‑G‑GG‑GG‑AGTAGAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAATTTACAACTCTTCTTCAGCAAGGAAACGCCTGGtt > 2:4094335/1‑100 (MQ=255) ggTACTGGG‑G‑GG‑GG‑AGTAGAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAATTTACAACTCTTCTTCAGCAAGGAAACGCCTGGttc > 1:321985/1‑100 (MQ=255) gTACTGGG‑G‑GG‑GG‑AGTAGAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAATTTACAACTCTTCTTCAGCAAGGAAACGCCTGGttct > 2:1638881/1‑100 (MQ=255) tgt‑GG‑G‑GG‑GA‑AGTAGAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAATTTACAACTCTTCTTCAGCAAGGAAACGCCTGGTTCTTCa < 1:2007141/98‑1 (MQ=255) gtt‑GG‑G‑GG‑GG‑AGTAGAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAATTTACAACTCTTCTTCAGCAAGGAAACGCCTGGTTCTTCa < 1:3511764/98‑1 (MQ=255) | TCTGTTTATCACGGATTGTATGAGACATGGCAACACCTGGTTAACAAGAATATGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGTACT‑GG‑G‑GG‑GG‑AGTAGAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAATTTACAACTCTTCTTCAGCAAGGAAACGCCTGGTTCTTCA > NC_000913/2185769‑2185965 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |