| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 354,288 | 0 | T | G | 31.6% | 132.3 / 16.6 | 57 | V528G (GTG→GGG) | prpE | propionate‑‑CoA ligase |
| Reads supporting (aligned to +/- strand): ref base T (2/37); new base G (18/0); total (20/37) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.12e-13 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
ATCTGGGGCGACGACGGCCGCTTTGTGAAGACTTACTGGTCGCTGTTTTCCCGCCCGGTGTACGCCACCTTTGACTGGGGCATCCGTGACGCTGACGGTTATCACTTTATTCTCGGGCGCACTGACGATGTAATTAACGTTGCCGGGCATCGGCTGGGGACGCGCGAGATTGAAGAGAGTATCTCCAGCCATCCGGGCGTTGCCGAAGTGGCGGTGGTTGGGGTGAAAGATGC‑GCTGAAAGGGCAGGTGGCGGTGGCGTTTGTCATTCCGAAAGA‑GAGCGACAGTCTGGAAGATCGTGATGTGGCGCACTCGCAAG‑AGAAGGCGATTATGGCGC‑TGGTGGACAGCCAGATTGGCAACTTTGGCCGCCCGGCGCACGTCTGGTTTGTCTCGCAATTGCCAAAAACGCGATCCGGAAAAATGCTGCGCCGCACGATCCAGGCGATTTGCGAAGGACGCGAT > NC_000913/354065‑354523 | aTCTGGGGCGACGACGGCCGCTTTGTGAAGACTTACTGGTCGCTGTTTTCCCGCCCGGTGTACGCCACCTTTGACTGGGGCATCCGTGACGCTGACGGTTATCACTTTATTCTCGGGCGCACTGACGATGTAATTAACGTTGCCGGGCATCGGCTGGGGACGCGCGAGATTGAAGAGAGTATCTCCAGCCATCCGGGCGTTGCCGAAGTGGCGGGGGGGGGGGGGGAAGAGTC‑GCtcga > 2:1607516/1‑236 (MQ=255)aTCTGGGGCGACGACGGCCGCCTTGTGAAGACTTACTGGTCGCTGTTTTCCCGCCCGGTGTACGCCACCTTTGACTGGGGCATCCGTGACGCTGACGGTTATCACTTTATTCTCGGGCGCACTGACGATGTAATTAACGTTGCCGGGCATCGGCTGGGGACGCGCGAGATTGAAGAGAGTATCTCCAGCCATCCGGGGGTCGCCGAAGTGGCGGTGGGTGGGGGGGGAGATggtctgca > 2:403354/1‑232 (MQ=255) cTGGGGCGACGACGGCCGCTTTGTGAAGACTTACTGGTCGCTGTTTTCCCGCCCGGTGTACGCCACCTTTGACTGGGGCATCCGTGACGCTGACGGTTATCACTTTATTCTCGGGCGCACTGACGATGAAATTAAAGTTGCCGGGCATCGGCTGGGGACGCGCGAGATTGAAGAGAGTATCTCCAGCCATCCGGGCGTTGCCGAAGGGGCGGCGGGGGGGGGGGGAGATac‑gcggcaaa > 1:961881/1‑233 (MQ=255) acgacgGCCGCTTTGTGAAGACTTACTGGTCGCTGTTTTCCCGCCCGGTGTACGCCACCTTTGACTGGGGCATCCGTGACGCTGACGGTTATCACTTTATTCTCGGGCGCACTGACGATGTAATTAACGTTGCCGGGCATCGGCTGGGGACGCGCGACATTGTAGCGAGTATCTCCAGCCATCCGGGCGTTGCCGAAGTGGCGGGGGGTGGGGGGGGAGATGG‑GCCTgcagggcagggg > 2:748832/1‑237 (MQ=255) ggCCGCTTTGTGAAGACTTACTGGTCGCTGTTTTCCCGCCCGGTGTACGCCACCTTTGACTGGGGCATCCGTGACGCTGACGGTTATCACTTTATTCTCGGGCGCACTGACGATGTAATTAACGTTGCCGGGCATCGGCTGGGGACGCGCGAGATTGAAGAGAGTATCTCCAGCCATCCGGGCGTTGCCGAAGTGGCGGTGGTTGGGGTGAAAGATGC‑GCTGAAAGGGCAggtggcggt < 1:748832/239‑1 (MQ=255) gtgAAGACTTACTGGTCGCTGTTTTCCCGCCCGGTGTACGCCACCTTTGACTGGGGCATCCGTGACGCTGACGGTTATCACTTTATTCTCGGGCGCACTGACGATGTAATTAACGTTGCCGGGCATCGGCTGGGGACGCGCGAGATTGAAGAGAGTATCTCCAGCCATCCGGGCGTTGCCGAAGTGGCGGTGGTTGGGGTGAAAGATGC‑GCTGAAAGGGCAGGTGGCGGTGGCGTTTGt < 2:1441547/239‑1 (MQ=255) cGCTGTTTTCCCGCCCGGTGTACGCCACCTTTGACTGGGGCATCCGTGACGCTGACGGTTATCACTTTATTCTCGGGCGCACTGACGATGTAATTAACGTTGCCGGGCATCGGCTGGGGACGCGCGAGATTGAAGAGAGTATCTCCAGCCATCCGGGCGTTGCCGAAGTGGCGGGGGTTTGGGGGGAAGAAGCGGCTG‑AAGGGCAGGGGGGGGGGGGGGTTGTCTTTTCGagaaggagc > 2:954317/1‑231 (MQ=255) tGTTTTCCCGCCCGGTGTACGCCACCTTTGACTGGGGCATCCGTGACGCTGACGGTTATCACTTTATTCTCGGGCGCACTGACGATGTAATTAACGTTGCCGGGCATCGGCTGGGGACGCGCGAGATTGAAGAGAGTATCTCCAGCCATCCGGGCGTTGCCGAAGTGGCGGTGGTTGGGGTGAAAGATGC‑GCTGAAAGGGCAGGTGGCGGTGGCGTTTGTCATTCCGAAAGA‑GAGCGa < 1:596173/238‑1 (MQ=255) gTTTTCCCGCCCGGTGTACGCCACCTTTGACTGGGGCATCCGTGACGCTGACGGTTATCACTTTATTCTCGGGCGCACTGACGATGTAATTAACGTTGCCGGGCATCGGCTGGGGACGCGCGAGATTGAAGAGAGTATCTCCAGCCATCCGGGCGTTGCCGAAGTGGAGGTGGTTGGGGTGAAAGATGC‑GCTGAAAGGGCAGGTGGCGGTGGCGTTTGTCATTCCGAGAGA‑GAGCGACa < 1:1732851/239‑1 (MQ=255) ttttCCCGCCCGGTGTACGCCACCTTTGACTGGGGCATCCGTGACGCTGACGGTTATCACTTTATTCTCGGGCGCACTGACGATGTAATTAACGTTGCCGGGCATCGGCTGGGGACGCGCGAGATTGAAGAGAGTGTCTCCAGCCATCCGGGCGTTGCCGAAGTGGCGGTGGTTGGGGTGAAAGATGC‑GCTGAAAGGGCAGGTGGCGGTGGCGTTTGt < 1:1174264/218‑1 (MQ=255) cgcccgGTGTACGCCACCTTTGACTGGGGCATCCGTGACGCTGACGGTTATCACTTTATTCTCGGGCGCACTGACGATGTAATTAACGTTGCCGGGCATCGGCTGGGGACGCGCGAGATTGAAGAGAGTATCTCCAGCCATCCGGGCGTTGCCGAAGTGGCGGTGGTTGGGGTGAAAGATGC‑GCTGAAAGGGCAGGTGGCGGTGGCGTTTGTCATTCCGAAAGA‑GAGCGACAGTCTGGa < 2:1227559/239‑1 (MQ=255) gcccgGTGTACGCCACCTTTGACTGGGGCATCCGTGACGCTGACGGTTATCACTTTATTCTCGGGCGCACTGACGATGTAATTAACGTTGCCGGGCATCGGCTGGGGACGCGCGAGATTGAAGAGAGTATCTCCAGCCATCCGGGCGTTGCCGAAGTGGCGGTGGTTTGGGTGAAAGATGC‑GCTGAAAGGGCAGGTGGCGGTGGCGTTTGTCATTCCGAAAGA‑GAGCGACAGTCTGGaa < 1:1828675/239‑1 (MQ=255) ccTTTGACTGGGGCATCCGTGACGCTGACGGTTATCACTTTATTCTCGGGCGCACTGACGATGTAATTAACGTTGCCGGGCATCGGCTGGGGACGCGCGAGATTGAAGAGAGTATCTCCAGCCATCCGGGCGTTGCCGAAGTGGCGGTGGGTGGGGGGGAAGATGC‑GCTGGAAGGGCAGGGGGGGGGGGGGGTTGTCATTCCGGAAGA‑GAGGGAGAGTCTGGAAGAGTGTGagggggg > 1:1019601/1‑232 (MQ=255) cTTTGACTGGGGCATCCGTGACGCTGACGGTTATCACTTTATTCTCGGGCGCACTGACGATGTAATTAACGTTGCCGGGCATCGGCTGGGGACGCGCGAGATTGAAGAGAGTATCTCCAGCCATCCGGGCGTTGCCGAAGTGGCGGTGGTTGGGGTGAAAGATGC‑GCTGAAAGGGCAGGTGGCGGTGGCGTTTGTCATTCCGAAAGA‑GAGCGACAGTCTGGAAGATCGTGATGTGgcgc < 1:1607516/239‑1 (MQ=255) cTTTGACTGGGGCATCCGTGACGCTGACGGTTATCACTTTATTCTCGGGCGCACTGACGATGTAATTAACGTTGCCGGGCATCGGCTGGGGACGCGCGAGATTGAAGAGAGTATCTCCAGCCATCCGGGCGTTGCCGAAGTGGCGGGGGTTGGGGGGAAAGATGC‑GCTGAAAGGGGAGGGGGCGGGGGGGGTTGTCATTCCGAAAGA‑GAGCGACAGTCTGGAAGATCGGGATGTGgcgc > 1:686627/1‑239 (MQ=255) gggCATCCGTGACGCTGACGGTTATCACTTTATTCTCGGGCGCACTGACGATGTAATTAACGTTGCCGGGCATCGGCTGGGGACGCGCGAGATTGAAGAGAGTATCTCCAGCCATCCGGGCGTTGCCGAAGTGGCGGGGGGTGGGGGGAAAGATGC‑GCTGAAAGGGCAGGTGGCGGGGGCGGTTGTCATTCCGAAAGA‑GAGCGACAGTCTGGAAGATCGTGATGTGGGGCACTCGCAag > 1:478376/1‑239 (MQ=255) cGTGACGCTGACGGTTATCACTTTATTCTCGGGCGCACTGACGATGTAATTAACGTTGCCGGGCATCGGCTGGGGACGCGCGAGATTGAAGAGAGTATCTCCAGCCATCCGGGCGTTGCCGAAGTGGCGGTGGTTGGGGTGAAAGATGC‑GCTGAAAGGGCAGGTGGCGGTGGCGTTTGTCATTCCGAAAGA‑GAGCGACAGTCTGGAAGATCGTGATGTGgcgc < 1:817514/223‑1 (MQ=255) cGTGACGCTGACGGTTATCACTTTATTCTCGGGCGCACTGACGATGT‑ATTAACGTTGCCGGGCATCGGCTGGGGACGCGCGAGATTGAAGAGAGTATCTCCAGCCATCCGGGCGTTGCCGAAGTGGCGGTGGTTGGGGTGAAAGATGC‑GCTGAAAGGGCAGGTGGCGGTGGCGTTTGTCATTCCGAAAGA‑GAGCGa < 1:1550888/196‑1 (MQ=255) tGACGGTTATCACTTTATTCTCGGGCGCACTGACGATGTAATTAACGTTGCCGGGCATCGGCTGGGGACGCGCGAGATTGAAGAGAGTATCTCCAGCCATCCGGGCGTTGCCGAAGTGGCGGTGGTTGGGGTGAAAGATGC‑GCTGAAAGGGCAGGTGGCGGTGGCGTTTGTCATTCCGAAAGA‑GAGCGACAGTCTGGAAGATCGTGATGTGGCGCACTCGCAAG‑AGAAGGCGATTATgg < 1:806873/239‑1 (MQ=255) gACGGTTATCACTTTATTCTCGGGCGCACTGACGATGTAATTAACGTTGCCGGGCATCGGCTGGGGACGCGCGAGATTGAAGAGAGTATCTCCAGCCATCCGGGCGTTGCCGAAGTGGCGGGGGGTGGGGGGGAAGAAGC‑GCTGGAAGGGCAGGGGGCGGGGGCGGGTGTCATTCCGAGAAA‑GAGCGGCAGGCTGGGAGATCGGGATGGGGGGCACTCGCCAG‑AAAAgggggtgtaggc > 2:1854237/1‑229 (MQ=255) aCGGTTATCACTTTATTCTCGGGCGCACTGACGATGTAATTAACGTTGCCGGGCATCGGCTGGGGACGCGTTAGATTGAAGAGAGTATCTCCAGCCATCCGGGCGTTGCCGAAGTGGCGGTGGTTGGGGGGAAAGATGC‑GCTGAAAGGGCAGGTGGGGGGGGGGTTTGTCATTCCGAAAGA‑GAGGGACAGTCTGGGAGATCGTGATGTGGGGCACTCGCAAG‑AGAAGGCGAGTATggt > 1:1859495/1‑237 (MQ=255) ggTTATCACTTTATTCTCGGGCGCACTGACGATGTAATTAACGTTGCCGGGCATCGGCTGGGGACGCGCGAGATTGAAGAGAGTATCTCCAGCCATCCGGGCGTTGCCGAAGTGGCGGTGGTTGGGGTGAAAGATGC‑GCTGAAAGGGCAGGTGGCGGTGGCGTTTGTCATTCCGAAAGA‑GAGCGACAGTCTGGAAGATCGTGATGTGGCGCACTCGCAAG‑AGAAGGCGATTATGGCGC‑t < 1:1075784/239‑1 (MQ=255) ttATCAGTTTATTCTCGGGCGCACTGACGATGTAATTAACGTTGCCGGGCATCGGCTGGGGACGCGCGAGATTGAAGAGAGTATCTCCAGCCATCCGGGCGTTGCCGAAGTGGCGGTGGTTGGGGTGAAAGATGC‑GCTGAAAGGGCAGGTGGCGGTGGCGTTTGTCATTCCGAAAGA‑GAGCGACAGTCTGGAAGATCGTGATGTGGCGCACTCGc < 1:678277/215‑1 (MQ=255) tATCACTTTATTCTCGGGCGCACTGACGATGTAATTAACGTTGCCGGGCATCGGCTGGGGACGCGCGAGATTGAAGAGAGTATCTCCAGCCATCCGGGCGTTGCCGAAGTGGCGGTGGTTGGGGTGAAAGATGC‑GCTGAAAGGGCAGGTGGCGGTGGCGTTTGTCATTCCGAAAGA‑GAGCGACAGTCTGGAAGATCGTGATGTGGCGCACTCGCAAG‑AGAAGGCGATTATGGCGC‑tgg < 1:270087/238‑1 (MQ=255) ttATTCTCGGGCGCACTGACGATGTAATTAACGTTGCCGGGCATCGGCTGGGGACGCGCGAGATTGAAGAGAGTATCTCCAGCCATCCGGGCGTTGCCGAAGTGGCGGTGGTTGGGGt < 2:1717721/118‑1 (MQ=255) ttATTCTCGGGCGCACTGACGATGTAATTAACGTTGCCGGGCATCGGCTGGGGACGCGCGAGATTGAAGAGAGTATCTCCAGCCATCCGGGCGTTGCCGAAGTGGCGGTGGTTGGGGt > 1:1717721/1‑118 (MQ=255) aTTCTCGGGCGCACTGACGATGTAATTAACGTTGCCGGGCATCGGCTGGGGACGCGCGAGATTGAAGAGAGTATCTCCAGCCATCCGGGCGTTGCCGAAGTGGCGGGGGGTGGGGGGAAAGAAGG‑GCTGAGAGGGCCGGGGAGGGGGGGGCTTGTGCTTCCGAAAAA‑GAGGGCCAAGCTGGGAGGACGAGGTGTGGGGCGCTCTCGCG‑AGAAggggc > 2:678277/1‑214 (MQ=255) cGATGTAATTAACGTTGCCGGGCATCGGCTGGGGACGCGCGAGATTGAAGAGAGTATCTCCAGCCATCCGGGCGTTGCCGAAGTGGCGGTGGTTGGGGTGAAAGATGC‑GCTGAAAGGGCAGGTGGCGGTGGCGTTTGTCATTCCGAAAGA‑GAGCGACAGTCTGGAAGATCGTGATGTGGCGCACTCGCAAG‑AGAAGGCGATTATGGCGC‑TGGTGGACAGCCAGATTGGCAACTTTGgc < 1:403354/238‑1 (MQ=255) ggaaTTAACGTTGCCGGGCAGCGGCTGGGGACGCGCGAGATTGAAGAGAGTATCTCCAGCCATCCGGGCGTTGCCGAAGTGGCGGTGGTTGGGGTGAAAGATGC‑GCTGAAAGGGCAGGTGGCGGTGGCGTTTGTCATTCCGAAAGA‑GAGCGACAGTCTGGAAGATCGTGATGTGGCGCACTCGCAAG‑AGAAGGCGATTATGGCGC‑TGGTGGACAGCCAGATTGGCAACTTTGgccgcc < 2:978284/236‑1 (MQ=255) gTAATTAACGTTGCCGGGCATCGGCTGGGGACGCGCGAGATTGAAGAGAGTATCTCCAGCCATCCGGGCGTTGCCGAAGTGGCGGGGGGTGGGGGGGAAGAATG‑GCTGTAAGGGGAGGGGGGGGGGGGGGTTGGTATTCCGGAAGAGGGGGGACAG‑CTTGGAGATCGTGGAGTGGGGGCCCCGCACG‑GAAAGGCGGGTTTGGCGCGGGGGGGACA‑CCGGATTGGGAAACTTGGGCGccc > 2:385501/1‑239 (MQ=255) tAATTAACGTTGCCGGGCATCGGCTGGGGACGCGCGAGATTGAAGAGAGTATCTCCAGCCATCCGGGCGTTGCCGAAGTGGCGGTGGTTGGGGTGAAAGATGC‑GCTCTAAGGGCAGGTGGCGGTGGCGTTTGTCATTCCGAAAGA‑GAGCGACAGTCTGGAAGATCGTGATGTGGCGCa < 1:1847068/178‑1 (MQ=255) tGCCGGGCATCGGCTGGGGACGCGCGAGATTGAAGAGAGTATCTCCAGCCATCCGGGCGTTGCCGAAGTGGCGGTGGTTGGGGTGAAAGATg < 2:1167769/92‑1 (MQ=255) tGCCGGGCATCGGCTGGGGACGCGCGAGATTGAAGAGAGTATCTCCAGCCATCCGGGCGTTGCCGAAGTGGCGGTGGTTGGGGTGAAAGATg > 1:1167769/1‑92 (MQ=255) tGCCGGGCATCGGCTGGGGACGCGCGAGATTGAAGAGAGTATCTCCAGCCATCCGGGCGTTGCCGAAGTGGCGGTGGTTGGGGTGAAAGATGC‑GCTGAAAGGGCAGGTGGCGGTGGCGTTTGTCATTCCGAAAGA‑GAGCGACAGTCTGGAAGATCGTGATGTGGCGCACTCGCAAG‑AGAAGGCGATTATGGCGC‑TGGTGGACAGCCAGATTGGCAACTTTGGCCGCCCGGCGCACGTc < 1:1536207/238‑1 (MQ=255) tGCCGGGCATCGGCTGGGGACGCGCGAGATTGAAGAGAGTATCTCCAGCCATCCGGGCGTTGCCGAAGTGGCGGGGGGTGGGGGGGAAAAAGG‑GCTGGAAGGGGAGGGGGCGGGGGCGTTTTTTCTTGCGAAAGA‑GAGGGACAGAGTGGGAGATAGGGTGGTGGCGCCCCCGCACG‑AGGAGGCGAGTATGGGGG‑GTGTGGACAGCGCGAATGTGAACATTGGTCTCCCCGCGCAcc > 2:713416/1‑235 (MQ=255) cGGGCATCGGCTGGGGACGCGCGAGATTGAAGAGAGTATCTCCAGCCATCCGGGCGTTGCCGAAGTGGCGGTGGTTGGGGTGAAAGATGC‑GCTGAAAGGGCAGGTGGCGGTGGCGTTTGTCATTCCGAAAGA‑GAGCGACAGTCTGGAAGATCGTGATGTGGCGCACTTGCAAG‑AGAAGGCGATTATGGCGC‑TGGTGGACAGCCAGATTGGCAACTTTGGCCGCCCGGCGCACGTCTGGt < 1:1854237/239‑1 (MQ=255) aCGCGCGAGATTGAAGAGAGTATCTCCAGCCATCCGGGCGTTGCCGAAGTGGCGGTGGTTGGGGTGAAAGATGC‑GCTGAAAGGGCAGGTGGCGGTGGCGTTTGTCATTCCGAAAGA‑GAGCGACAGTCTGGAAGATCGTGATGTGGCGCACTCGCAAG‑AGAAGGCGATTa < 1:1362067/169‑1 (MQ=255) gaTTGAAGAGAGTATCTCCAGCCATCCGGGCGTTGCCGAAGTGGCGGTGGTTGGGGTGAAAGATGC‑GCTGAAAGGGCAGGTGGCGGTGGCGTTTGTCATTCCGAAAGA‑GAGCGACAGTCTGGAAGATCGTGATGTGGCGCACTCGCAAG‑AGAAGGCGATTATGGCGC‑TGGTGGACAGCCAGATTGGCAACTTTGGCCGCCCGGCGCACGTCTGGTTTGTCTCGCAATTGCCAAAAAcg < 1:86275/238‑1 (MQ=255) ttGAAGAGAGTATCTCCAGCCATCCGGGCGTTGCCGAAGTGGCGGTGGTTGGGGTGAAAGATGC‑GCTGAAAGGGCAggtggcgg < 2:1294038/84‑1 (MQ=255) ttGAAGAGAGTATCTCCAGCCATCCGGGCGTTGCCGAAGTGGCGGTGGTTGGGGTGAAAGATGC‑GCTGAAAGGGCAGGTGGCGGTGGCGTTTGTCATTCCGAAAGA‑GAGCGACAGTCTGGAAGATCGTGATGTGGCGCACTCGCAAG‑AGAAGGCGATTATGGCGC‑TGGTGGACAGCCAGATTGGCAACTTTGGCCGCCCGGCGCACGTCTGGTTTGTCTCGCAATTGCCAAAAAcgcg < 1:1225556/238‑1 (MQ=255) aaGAGAGTATCTCCAGCCATCCGGGCGTTGCCGAAGTGGCGGTGGTTGGGGTGAAAGATGC‑GCTGAAAGGGCAGGTGGCGGTGGCGTTTGTCATTCCGAAAGA‑GAGCGACAGTCTGGAAGATCGTGATGTGGCGCACTCGCAAG‑AGAAGGCGATTATGGCGC‑TGGTGGACAGCCAGATTGGCAACTTTGGCCGCCCGGCGCACGTCTGGTTTGTCTCGCAAt < 1:306579/222‑1 (MQ=255) agTATCTCCAGCCATCCGGGCGTTGCCGAAGTGGCGGTGGTTGGGGTGAAAGATGC‑GCTGAAAGGGCAGGTGGCGGTGGCGTTTGTCATTCCGAAAGA‑GAGCGACAGTCTGGAAGATCGTGATGTGGCGCACTCGCAAG‑AGAAGGc < 1:529137/146‑1 (MQ=255) agTATCTCCAGCCATCCGGGCGTTGCCGAAGTGGCGGTGGTTGGGGTGAAAGATGC‑GCTGAAAGGGCAGGTGGCGGTGGCGTTTGTCATTCCGAAAGA‑GAGCGACAGTCTGGAAGATCGTGATGTGGCGCACTCGCAAG‑AGAAGGCGATTATGGCGC‑TGGTGGACAGCCAGATTGGCAACTTTGgccgcc < 1:1423879/190‑1 (MQ=255) agTATCTCCAGCCATCCGGGCGTTGCCGAAGTGGCGGTGGGTGGGGGGGAAGATGC‑CCCGAAAAGGCAGGGGGGGGTGGGGGTTGTCATTTCGACAGA‑GAGCGACAGTCTGGGAGATTGGGGTGTGGGCCACCCGCCAG‑AGAAGGCGATTATTGCGG‑TGGTGGGCAGCCCGCGTGGCCACCTTGGCCGCCCCGCGCCCGTCTGGTTTTGTTCGCCAGTGCCCAAAACCCCATCCGGgaa > 2:143366/1‑239 (MQ=255) agTATCTCCAGCCATCCGGGCGTTGCCGAAGTGGCGGTGGGGGGGGGGGAAAATGC‑GCGGAAAGGGGAGGGGGCGGGGGCGTTTGTTGGTTCGGAAAA‑GAGCGACAGGCTGGAAGATCGTGATGTTGGGCACTCCCCAC‑AGAAGGGGCTTATGGGGG‑TGGGGGGGCGCCCGGTTTGGAACCTTGGCCGCCCGGCGGCCGTTCGGGTTGTCCCGCAATTGCCAAAAAAGCGATCCGGgaa > 2:1779925/1‑239 (MQ=255) tATCTCCAGCCATCCGGGCGTTGCCGAAGTGGCGGTGGGTGGGGGGAAAAATGC‑GCTGAAAGGGCAGGGGGCGGGGGCGttttt > 1:1294038/1‑82 (MQ=255) tcCAGCCATCCGGGCGTTGCCGAAGTGGCGGTGGTTGGGGTGAAAGATGC‑GCTGAAAGGGCAGGTGGCGGTGGCGTTTGTCATTCCGAAAGA‑GAGCGACAGTCTGGAAGATCGTGATGTGGCGCACTCGCAAG‑AGAAGGCGATTATGGCGC‑TGGTGGACAGCCAGATTGGCAACTTTGGCCGCCCGGCGCACGTCTGGtt < 1:108388/200‑1 (MQ=255) gCCATCCGGGCGTTGCCGAAGTGGCGGTGGGTGGGGGGGAAAATGC‑GCCGGAAGGGGGGGGGGGGGGGGGGGTTGTTCTTCCGAAAGA‑GAGGGGCAGTCTGGGAGATCGGGATGGGGCGCACTCCCAAC‑AGAAGGCGGTTATgggg > 2:529137/1‑144 (MQ=255) gCCATCCGGGCGTTGCCGAAGTGGCGGTGGGTGGGGGGAAAAATGC‑GCTGGAAGGGGAGGGGGCGGGGGGGGTTGTTATTCCCGAAGA‑GAGGGGCAGTCTGGGAGATCGGGGTGTGGGGCCCTCGCCAG‑AGAAGGGGATTATGGCGC‑CGGGGGACAGCCAGAATGGGCACATTGGCCGccccggggccgt > 2:1423879/1‑181 (MQ=255) cATCCGGGCGTTGCCGAAGTGGCGGTGGTTGGGGTGAAAGATGC‑GCTGAAAGGGCAGGTGGCGGTGGCGTTTGTCATTCCGAAAGA‑GAGCGACAGTCTGGAAGATCGTGATGTGGCGCACTCGCAAG‑AGAAGGCGATTATGGCGC‑TGGTGGACAGCCAGATTGGCAACTTTGGCCGCCCGGCGCACGTCTGGTTTGTCTCGCAATTGCCAAAAACGCGATCCGGAAAAATGCTgcg < 1:143366/236‑1 (MQ=255) tacGGGCGTGGCAGAAGTGGAGGGGCATGAGGTGAAAGGTGA‑GGTGGAAGGGCTGGTGGCGGTGGCGTTTGTCATTCCGAAAGA‑GGGTTACAGGCTGGAAGATCGTGATGTGGCGCACTC‑CAAGAAGAAGGCGATTATGGCGC‑TGATCGACAGCCAGATTGGCAACTTTGGCCGCCCGGCGGAGGTCAGGTTTGTCCCGCAAATGCCAAAAACGGCATCCAGAAAAAtgctccacccca < 2:961881/237‑9 (MQ=255) tCCGGGCGTTGCCGAAGTGGCGGTGGTTGGGGTGAAAGATGC‑GCTGAAAGGGCAGGTGGCGGTGGCGTTTGTCATTCCGAAAGA‑GAGCGACAGTCTGGAAGATCGTGATGTGGCGCACTCGCAAG‑AGAAGGCGATTATGGCGC‑TGGTGGACAGCCAGATTGGCAACTTTGGCCGCCCGGCGCACGTCTGGTTTGTCTCGCAATTGCCAAAAACGCGATCCGGAAAAATGCTGCGCCGCa < 1:713416/239‑1 (MQ=255) tCCGGGCGTTGCCGAAGTGGCGGTGGTTGGGGTGAAAGATGC‑GCTGAAAGGGCAGGTGGCGGTGGCGTTTGTCATTCCGAAAGA‑GAGCGACAGTCTGGAAGATCGTGATGTGGCGCACTCGCAAG‑AGAAGGCGATTATGGCGC‑TGGTGGACAGCCAGATTGGCAACTTTGGCCGCCCGGCGCACGTCTGGTTTGTCTCGCAATTGCCAAAAACGCGATCCGGAAAAATGCTGCGCCGCa < 1:37464/239‑1 (MQ=255) tCCGGGCGTTGCCGAAGTGGCGGTGGTTGGGGTGAAAGATGC‑GCTGAAAGGGCAGGTGGCGGTGGCGTTTGTCATTCCGAAAGA‑GAGCGACAGTCTGGAAGATCGTGATGTGGCGCACTCGCAAG‑AGAAGGCGATTATGGCGC‑TGGTGGACAGCCAGATTGGCAACTTTGGCCGCCCGGCGCACGTCTGGTTTGTCTCGCAATTGCCAAAAACGCGATCCGGAAAAATGCTGCGCCGCa < 1:661283/239‑1 (MQ=255) tCCGGGAGTTGCCGAAGTGGCGGTGGTTGGGGTGAAAGATGC‑GCTGAAAGGGCAGGTGGCGGTGGCGTTTGTCATTCCGAAAGA‑GAGCGACAGTCTGGAAGATCGTGATGTGGCGCACTCGCAAG‑AGAAGGCGATTATGGCGC‑TGGTGGACAGCCAGATTGGCAACTTTGGCCGCCCGGCGCACGTCTGGTTTGTCTCGCAATTGCCAAAAACGCGATCCGGAAAAATGCTGCGCCGCa < 1:223449/239‑1 (MQ=255) aGTGGCGGTGGTTGGGGTGAAAGATGC‑GCTGAAAGGGCAGGTGGCGGTGACGTTTGTCATTCCGAAAGA‑GAGCGACAGTCTAGAAGATCGTGATGTGGCGCACTCGCAAG‑AGAAGGCGATTATGGCGC‑TGGTGGACAGCCAGATTGGCAACTTTGGCCGCCCGGCGCACGTCTGGt < 1:222671/176‑1 (MQ=255) ttGGGGTGAAAGATGC‑GCTGAAAGGGCAGGTGGCGGTGGCGTTTGTCATTCCGAAAGA‑GAGCGACAGTCTGGAAGATCGTGATGTGGCGCACTCGCAAG‑AGAAGGCGATTATGGCGC‑TGGTGGACAGCCAGATTGGCAACTTTGGCCGCCCGGCGCACGTCTGGTTTGTCTCGCAATTGCCAAAAACGCGATCCGGAAAAATGCTGCGCCGCACGATCCAGGCGATTTGCGAAGGAcg < 2:1019601/238‑1 (MQ=255) ttGGGGTGAAAGATGC‑GCTGAAAGGGCAGGTGGCGGTGGCGTTTGTCATTCCGAAAGA‑GAGCGACAGTCTGGAAGATCGTGATGTGGCGCACTCGCAAG‑AGAAGGCGATTATGGCGC‑TGGTGGACAGCCAGATTGGCAACTTTGGCCGCCCGGCGCACGTCTGGTTGGTCTCGCAATTGCCAAAAACGCGATCCGGAAAAATGCTGCGCCGCACGATCCAGGCGATTTGCGAAGGAcg < 1:1805261/238‑1 (MQ=255) ggTGAAAGATGC‑GCTGAAAGGGCAGGTGGCGGGGGCGTTTGTCATTCCGAAAGA‑GAGCGACAGTCTGGAAGATCGTGATGTGGCGCACTCGCAAG‑AGAAGGCGATTATGGCGC‑TGGTGGACAGCCAGATTGGCAACTTTGGCCGCCCGGCGCACGTCTGGTTTGTCTCGCAATTGCCAAAAACGCGATCCGGAAAAATGCTGCGCCGCACGATCCAGGCGACTTGCGAAGCACGCGAt > 1:313287/1‑238 (MQ=255) | ATCTGGGGCGACGACGGCCGCTTTGTGAAGACTTACTGGTCGCTGTTTTCCCGCCCGGTGTACGCCACCTTTGACTGGGGCATCCGTGACGCTGACGGTTATCACTTTATTCTCGGGCGCACTGACGATGTAATTAACGTTGCCGGGCATCGGCTGGGGACGCGCGAGATTGAAGAGAGTATCTCCAGCCATCCGGGCGTTGCCGAAGTGGCGGTGGTTGGGGTGAAAGATGC‑GCTGAAAGGGCAGGTGGCGGTGGCGTTTGTCATTCCGAAAGA‑GAGCGACAGTCTGGAAGATCGTGATGTGGCGCACTCGCAAG‑AGAAGGCGATTATGGCGC‑TGGTGGACAGCCAGATTGGCAACTTTGGCCGCCCGGCGCACGTCTGGTTTGTCTCGCAATTGCCAAAAACGCGATCCGGAAAAATGCTGCGCCGCACGATCCAGGCGATTTGCGAAGGACGCGAT > NC_000913/354065‑354523 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |