BRESEQ :: Evidence

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,764,701	0	G	A	21.9%	298.2 / 82.2	160	intergenic (‑315/+12)	sufA/rydB	Fe‑S cluster assembly protein/novel sRNA, function unknown
Reads supporting (aligned to +/- strand): ref base G (57/68); new base A (12/23); total (69/91)
Fisher's exact test for biased strand distribution p-value = 2.53e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.00e-01
Rejected as consensus: Frequency below/above cutoff threshold.

Only 100 of 163 total aligned reads displayed.

TGAAAAAGAAAAAGTTGTATTGAAAATGACTATTTAAGAGATAGGTAAAAAAGTGCAGCGTTCAGAAATAAGAAAACCCTTAAGTCTGTG‑CGACACAGGCTTAAGGG‑TTTCTACCCCATCCGGCGCTTATCTCCGGCACTCTCAGTGGCTTAGCTCTTGAAGGGGCGATAAGAATAATCTCATAAAGCTAACCCGCC  >  NC_000913/1764603‑1764799

tgaAAAAGAAAAAGTTGTATTGAAAATGACTATTTAAGAGATAGGTAAAAAAGTGCAGCGTTCAGAAATAAGAAAACCCTTAAGTCTGTG‑CGACACAgg                                                                                                     >  1:1277655/1‑99 (MQ=255)

tgaAAAAGAAAAAGTTGTATTGAAAATGACTATTTAAGAGATAGGTAAAAAAGTGCAGCGTTCAGAAATAAGAAAACCCTTAAGTCTGTG‑CGACACAgg                                                                                                     <  2:2115219/99‑1 (MQ=255)

 gaaaaagaaaaaGTTGTATTGAAAATGACTATTTAAGAGATAGGTAAAAAAGTGCAGCGTTCAGAAATAAGAAAACCCTTAAGTCTGTG‑CGACACAGGc                                                                                                    <  1:271042/99‑1 (MQ=255)

 gaaaaagaaaaaGTTGTATTGAAAATGACTATTTAAGAGATAGGTAAAAAAGTGCAGCGTTCAGAAATAAGAAAACCCTTAAGTCTGTG‑CGACACAGGc                                                                                                    <  1:1372172/99‑1 (MQ=255)

 gaaaaagaaaaaGTTGTATTGAAAATGACTATTTAAGAGATAGGTAAAAAAGTGCAGCGTTCAGAAATAAGAAAACCCTTAAGTCTGTG‑CGACACAGGc                                                                                                    >  2:2647010/1‑99 (MQ=255)

 gaaaaagaaaaaGTTGTATTGAAAATGACTATTTAAGAGATAGGTAAAAAAGTGCAGCGTTCAGAAATAAGAAAACCCTTAAGTCTGTG‑CGACACAGGc                                                                                                    <  1:3434858/99‑1 (MQ=255)

  aaaaagaaaaagTTGTATTGAAAATGACTATTTAAGAGATAGGTAAAAAAGTGCAGCGTTCAGAAATAAGAAAACCCTTAAGTCTGTG‑CGACACAGGCt                                                                                                   >  2:3532405/1‑99 (MQ=255)

   aaaagaaaaagTTGTATTGAAAATGACTATTTAAGAGATAGGTAAAAAAGTGCAGCGTTCAGAAATAAGAAAACCCTTAAGTCTGTG‑CGACACAGGCtt                                                                                                  >  1:760021/1‑99 (MQ=255)

   aaaagaaaaagTTGTACTGACACTGCCCATTCAAGAGGTAGGTGAGAAAGTGCAGCGTTCGGAAATAAGAAAACACTTACGTCTGTG‑CGCCACAGGCtt                                                                                                  >  2:2418108/1‑99 (MQ=255)

    aaagaaaaagTTGTATTGAAAATGACTATTTAAGAGATAGGTAAAAAAGTGCAGCGTTCAGAAATAAGAAAACCCTTAAGTCTGTG‑CGACACAGGCTTa                                                                                                 >  1:2861608/1‑99 (MQ=255)

    aaagaaaaagTTGTATTGAAAATGACTATTTAAGAGATAGGTAAAAAAGTGCAGCGTTCAGAAATAAGAAAACCCTTAAGTCTGTG‑CGACACAGGCTTa                                                                                                 >  1:3878556/1‑99 (MQ=255)

      agaaaaagTTGTATTGAAAATGACTATTTAAGAGATAGGTAAAAAAGTGCAGCGTTCAGAAATAAGAAAACCCTTAAGTCTGTG‑CGACACAGGCTTAAg                                                                                               <  1:3176577/99‑1 (MQ=255)

      agaaaaagTTGTATTGAAAATGACTATTTAAGAGATAGGTAAAAAAGTGCAGCGTTCAGAAATAAGAAAACCCTTAAGCCTGTGTCG‑CACAGACTTAAg                                                                                               >  2:2191396/1‑99 (MQ=37)

      agaaaaagTTGTATTGAAAATGACTATTTAAGAGATAGGTAAAAAAGTGCAGCGTTCAGAAATAAGAAAACCCTTAAGCCTGTGTCG‑CACAGACTTAAg                                                                                               <  1:960278/99‑1 (MQ=37)

      agaaaaagTTGTATTGAAAATGACTATTTAAGAGATAGGTAAAAAAGTGCAGCGTTCAGAAATAAGAAAACCCTTAAGCCTGTGTCG‑CACAGACTTAAg                                                                                               <  1:1187687/99‑1 (MQ=37)

      agaaaaagTTGTATTGAAAATGACTATTTAAGAGATAGGTAAAAAAGTGCAGCGTTCAGAAATAAGAAAACCCTTAAGCCTGTG‑TCGCACAGACTTAAg                                                                                               <  2:643405/99‑1 (MQ=37)

      agaaaaagTTGTATTGAAAATGACTATTTAAGAGATAGGTAAAAAAGTGCAGCGTTCAGAAATAAGAAAACCCTTAAGCCTGTG‑TCGCACAGACTTAAg                                                                                               <  2:662659/99‑1 (MQ=37)

       gaaaaagTTGTATTGAAAATGACTATTTAAGAGATAGGTAAAAAAGTGCAGCGTTCAGAAATAAGAAAACCCTTAAGCCTGTGTCG‑CACAGACTTAAgg                                                                                              <  1:967058/99‑1 (MQ=37)

       gaaaaagTTGTATTGAAAATGACTATTTAAGAGATAGGTAAAAAAGTGCAGCGTTCAGAAATAAGAAAACCCTTAAGCCTGTGTCG‑CACAGACTTAAgg                                                                                              <  1:1062028/99‑1 (MQ=37)

       gaaaaagTTGTATTGAAAATGACTATTTAAGAGAAAGGTAAAAAAGTGCAGCGTTCAGAAATAAGAAAACCCTTAAGTCTGTG‑CGACACAGGCTTAAgg                                                                                              >  2:3303613/1‑99 (MQ=255)

       gaaaaagTTGGATTGAACATGACTATTGAAGAGATAGGTAAAAAAGTGCAGCGTTCAGAAATAAGAAAACCCTTAAGCCTGTG‑TCGCACAGACTTAAgg                                                                                              <  2:2643001/99‑1 (MQ=25)

        aaaaagTTGTATTGAAAATGACTATTTAAGAGATAGGTGAAAAAGTGCAGCGTTCAGAAATAAGAAAACCCTTAAGTCTGTG‑CGACACAGGCTTAAggg                                                                                             <  1:346978/99‑1 (MQ=255)

        aaaaagTTGTATTGAAAATGACTATTTAAGAGATAGGTAAAAAAGTGCAGCGTTCAGAAATAAGAAAACCCTTAAGCCTGTGTCG‑CACAGACTTAAggg                                                                                             <  2:1291636/99‑1 (MQ=37)

         agaagTTTTATTGATAATGACTATTTAAGAGATAGGTAAAATAGTGCCGCGTTCAGAAATAAGAAAACCCTTAAGTCTGTG‑CGACACAGGCTTAAGGG‑t                                                                                           <  2:861795/97‑1 (MQ=255)

         aaaagTTGTATTGAAAATGACTATTTAAGAGATAGGTAAAAAAGTGCAGCGTTCAGAAATAAGAAAACCCTTAAGTCTGTG‑CGACACAGGCTTAAGGG‑t                                                                                           <  1:2576933/99‑1 (MQ=255)

         aaaagTTGTATTGAAAATGACTATTTAAGAGATAGGTAAAAAAGTGCAGCGTTCAGAAATAAGAAAACCCTTAAGTCTGTG‑CGACACAGGCTTAAGGG‑t                                                                                           <  2:2864089/99‑1 (MQ=255)

          aaagTTGTATTGAAAATGACTATTTAAGAGATAGGTAAAAAAGTGCAGCGTTCAGAAATAAGAAAACCCTTAAGTCTGTG‑CGACACAGGCTTAAGGG‑tt                                                                                          >  2:3445199/1‑99 (MQ=255)

          aaagTTGTATTGAAAATGACTATTTAAGAGATAGGTAAAAAAGTGCAGCGTTCAGAAATAAGAAAACCCTTAAGTCTGTG‑CGACACAGGCTTAAGGG‑tt                                                                                          <  1:29940/99‑1 (MQ=255)

            agTTGTATTGAAAATGACTATTTAAGAGATAGGTCAAAAAGTGCAGCGTTCAGAAATAAGAAAACCCTTAAGTCTGTG‑CGACACAGGCTTAAGGG‑TTTc                                                                                        >  2:3213643/1‑99 (MQ=255)

             gtcgTATTGAAAATGACTATTTAAGAGATAGGTAAAAAAGTGCAGCGTTCAGAAATAAGAAAACCCTTAAGTCTGTG‑CGACACAGGCTTAAGGG‑TTTCt                                                                                       <  1:109203/96‑1 (MQ=255)

              ttGTATTGAAAATGACTATTTAAGAGATAGGTAAAAAAGTGCAGCGTTCAGAAATAAGAAAACCCTTAAGCCTGTGTCG‑CACAGACTTAAGGG‑ttttct                                                                                      <  1:2593368/99‑4 (MQ=25)

              ttGTATTGAAAATGACTATTTAAGAGATAGGTAAAAAAGTGCAGCGTTCAGAAATAAGAAAACCCTTAAGCCTGTGTCG‑CACAGACTTAAGGG‑ttttct                                                                                      <  1:2592139/99‑4 (MQ=25)

               tGTATTGAAAATGACTATTTAAGAGATAGGTAAAAAAGTGCAGCGTTCAGAAATAAGAAAACCCTTAAGTCTGTG‑CGACACAGGCTTAAGGG‑TTTCTAc                                                                                     <  1:1454843/99‑1 (MQ=255)

               tGTATTGAAAATGACTATTTAAGAGATAGGTAAAAAAGTGCAGCGTTCAGAAATAAGAAAACCCTTAAGTCTGTG‑CGACACAGGCTTAAGGG‑TTTCTAc                                                                                     <  1:606561/99‑1 (MQ=255)

                 tATTGAAAATGACTATTTAAGAGATAGGTAAAGAAGTGCAGCGTTCAGAAATAAGAAAACCCTTAAGTCTGTG‑CGACACAGGCTTAAGGC‑TTTCTAccc                                                                                   >  2:3182766/1‑99 (MQ=255)

                   ttGAAAATGACTATTTAAGAGATAGGTAAAAAAGTGCAGCGTTCAGAAATAAGAAAACCCTTAAGTCTGTG‑CGACACAGGCTTAAGGG‑TTTCTACCCCa                                                                                 <  1:3404146/99‑1 (MQ=255)

                     gAAAATGACTATTTAAGAGATAGGTAAAAAAGTGCAGCGTTCAGAAATAAGAAAACCCTTAAGTCTGTG‑CGACACAGGCTTAAGGG‑TTTCTACCCCATc                                                                               >  2:2338981/1‑99 (MQ=255)

                     gAAAATGACTATTTAAGAGATAGGTAAAAAAGTGCAGCGTTCAGAAATAAGAAAACCCTTAAGTCTGTG‑CGACACAGGCTTAAGGG‑TTTCTACCCCATc                                                                               <  1:2253197/99‑1 (MQ=255)

                     gAAAATGACTATTTAAGAGATAGGTAAAAAAGTGCAGCGTTCAGAAATAAGAAAACCCTTAAGTCTGTG‑CGACACAGGCTTAAGGG‑TTTCTACCCCATc                                                                               >  2:2842525/1‑99 (MQ=255)

                     gAAAATGACTATTTAAGAGATAGGTAAAAAAGTGCAGCGTTCAGAAATAAGAAAACCCTTAAGTCTGTG‑CGACACAGGCTTAAGGG‑TTTCTACCCCATc                                                                               <  2:468630/99‑1 (MQ=255)

                      aaaaTGACTATTTAAGAGATAGGTAAAAAAGTGCAGCGTTCAGAAATAAGAAAACCCTTAAGTCTGTG‑CGACACAGGCTTAAGGG‑TTTCTACCCCATcc                                                                              >  1:2287527/1‑99 (MQ=255)

                      aaaaTGACTATTTAAGAGATAGGTAAAAAAGTGCAGCGTTCAGAAATAAGAAAACCCTTAAGTCTGTG‑CGACACAGGCTTAAGGG‑TTTCTACCCCATcc                                                                              <  1:1519379/99‑1 (MQ=255)

                          tGACTATTTAAGAGATAGGTAAAAAAGTGCAGCGTTCAGAAATAAGAAAACCCTTAAGTCTGTG‑CGACACAGGCTTAAGGG‑TTTCTACCCCATCCGgcg                                                                          <  1:1860702/99‑1 (MQ=255)

                           gACTATTTAAGAGATAGGTAAAAAAGTGCAGCGTTCAGAAATAAGAAAACCCTTAAGTCTGTG‑CGACACAGGCTTAAGGG‑TTTCTACCCCATCCGgcgc                                                                         >  2:3533834/1‑99 (MQ=255)

                            aCTATTTAAGAGATAGATAAAAAAGTGCAGCGTTCAGAAATAAGAAAACCCTTAAGTCTGTG‑CGACACAGGCTTAAGGG‑TTTCTACCCCATCCGGCGCt                                                                        >  2:2567913/1‑99 (MQ=255)

                              tATTTAAGAGATAGGTAAAAAAGTGCAGCGTTCAGAAATAAGAAAACCCTTAAGTCTGTG‑CGACACAGGCTTAAGGG‑TTTCTACCCCATCCGGCGCTTa                                                                      >  1:1746614/1‑99 (MQ=255)

                                  tAAGAGATAGGTAAAAAAGTGCAGCGTTCAGAAATAAGAAAACCCTTAAGTCTGTG‑CGACACAGGCTTAAGGG‑TTTCTACCCCATCCGGCGCTTAtctc                                                                  <  2:421410/99‑1 (MQ=255)

                                    agagATAGGTAAAAAAGTGCAGCGTTCAGAAATAAGAAAACCCTTAAGTCTGTG‑CGACACAGGCTTAAGGG‑TTTCTACCCCATCCGGCGCTTATCTCCg                                                                >  2:3163236/1‑99 (MQ=255)

                                     gagaTAGGTAAAAAAGTGCAGCGTTCAGAAATAAGAAAACCCTTAAGTCTGTG‑CGACACAGGCTTAAGGG‑TTTCTACCCCATCCGGCGCTTATCTCCgg                                                               <  1:1956408/99‑1 (MQ=255)

                                     gagaTAGGTAAAAAAGTGCAGCGTTCAGAAATAAGAAAACCCTTAAGTCTGTG‑CGACACAGGCTTAAGGG‑TTTCTACCCCATCCGGCGCTTATCTCCgg                                                               <  1:2669830/99‑1 (MQ=255)

                                            gTAAAAAAGTGCAGCGTTCAGAAATAAGAAAACCCTTAAGTCTGTG‑CGACACAGGCTTAAGGG‑TTTCTACCCCATCCGGCGCTTATCTCCGGCACtctc                                                        >  1:2980469/1‑99 (MQ=255)

                                            gTAAAAAAGTGCAGCGTTCAGAAATAAGAAAACCCTTAAGTCTGTG‑CGACACAGGCTTAAGGG‑TTTCTACCCCATCCGGCGCTTATCTCCGGCACtctc                                                        >  1:329181/1‑99 (MQ=255)

                                             tAAAAAAGTGCAGCGTTCAGAAATAAGAAAACCCTTAAGTCTGTG‑CGACACAGGCTTAAGGG‑TTTCTACCCCATCCGGCGCTTATCTCCGGCACTCTCa                                                       >  2:152964/1‑99 (MQ=255)

                                             tAAAAAACTGCAGCGTTCAGAAATAAGAAAACCCTTAAGTCTGTG‑CGACACAGGCTTAAGGG‑GTTCTACCCCATGCGGCCCTCATCTCCGGCACtctct                                                       >  2:3429947/1‑98 (MQ=255)

                                              aaaaaaGTGCAGCGTTCAGAAATAAGAAAGCCCTTAAGTCTGGG‑CGACACAGGCTTAAGGG‑TTTCTACCCCATCCGGCGCTTATCTCCGGCACTCTCAg                                                      <  1:239542/99‑1 (MQ=255)

                                              aaaaaaGTGCAGCGTTCAGAAATAAGAAAACCCTGCCGTCTGTG‑CGACAGAGGCTTAAGGG‑TTTCTACCCCATCCGGCGCTTATCTCCGGCACTCTCAg                                                      <  2:3791551/99‑1 (MQ=255)

                                                aaaaGTGCAGCGTTCAGAAATAAGAAAACCCTTAAGTCTGTG‑CGACACAGGCTTAAGGG‑TTTCTACCCCATCCGGCGCTTATCTCCGGCACTCTCAGTg                                                    >  1:727700/1‑99 (MQ=255)

                                                 aaaGTGCAGCGTTCAGAAATAAGAAAACCCTTAAGTCTGTG‑CGACACAGGCTTAAGGG‑TTTCTACCCCATCCGGCGCTTATCTCCGGCACTCTCAGTgg                                                   >  1:2813522/1‑99 (MQ=255)

                                                  aaGTGCAGCGTTCAAAAATAAGAGAACCCTTAAGTCTGTG‑CGAAACAGGCTTAAGTG‑TTTCTACCTCATCCGGCGCTTATCTCCGGCACTCTCAGTGGc                                                  <  2:1005241/99‑1 (MQ=255)

                                                   aGTGCAGCGTTCAGAAATAAGAAAACCCTTAAGTCTGTG‑CGACACAGGCTTAAGGG‑TTTCTACCCCATCCGGCGCTTATCTCCGGCACTCTCAGTGGCt                                                 <  2:2234776/99‑1 (MQ=255)

                                                      gCAGCGTTCAGAAATAAGAAAACCCTTAAGTCTGTG‑CGACACAGGCTTAAGGG‑TTTCTACCCCATCCGGCGCTTATCTCCGGCACTCTCAGTGGCTTAg                                              <  1:3268506/99‑1 (MQ=255)

                                                      gCAGCGTTCAGAAATAAGAAAACCCTTAAGTCTGTG‑CGACACAGGCTTAAGGG‑TTTCTACCCCATCCGGCGCTTATCTCCGGCACTCTCAGTGGCTTAg                                              <  1:3270134/99‑1 (MQ=255)

                                                         gCGGTCAGATATAAGAAACCCCTTGAGCCTGCG‑CGAGACAGGCTTAAGGG‑TTTCTACTCCATCCGGCGCTTACCTCCGGCACTCTCAGTGGCTTTGctc                                           <  2:3328916/99‑1 (MQ=255)

                                                              cAGAAGTAAGAAAACCCTTAAGTCGGTG‑GGACACAGGCTTAAGGG‑CGTCTACGCCGCCCGGCGATTATGTCCGGCCCTCTCAGTGGCTTAGCTCTTGaa                                      <  2:3373684/99‑1 (MQ=255)

                                                               aGAAATAAGAAAACCCTTAAGTCTGTG‑CGACACAGGCTTAAGGG‑TTTCTACCCCATCCGGCGCTTATCTCCGGCACTCTCAGTGGCTTAGCTCTTGAAg                                     >  2:2696852/1‑99 (MQ=255)

                                                               aGAAATAAGAAAACCCTTAAGTCTGTG‑CGACACAGGCTTAAGGG‑TTTCTACCCCATCCGGCGCTTATCTCCCGCACTCTCAGTGGCCTAGCTCTTGAAg                                     <  1:3483994/99‑1 (MQ=255)

                                                                gAAATAAGAAAACCCTTAAGTCTGTG‑CGACACAGGCTTAAGGG‑TTTCTACCCCATCCGGCGCTTATCTCCGGCACTCTCAGTGGCTTAGCTCTTGAAgg                                    >  2:1770978/1‑99 (MQ=255)

                                                                  aaTAAGACAAACCTTAAGTCTGTG‑CGAAACAGGCCTAAGGG‑TTTCTACCCCATCCGGCGCTTATCTCCGGCACCCTCAGTGGCTTAGCTCTTGAAgggg                                  <  2:831382/99‑1 (MQ=255)

                                                                   aTAAGAAAACCCTTAAGTCTGTG‑CGACACAGGCTTAAGGG‑TTTCTACCCCATCCGGCGCTTATCTCCGGCACTCTCAGTGGCTTAGCTCTTGAAGGGGc                                 <  1:252504/99‑1 (MQ=255)

                                                                    tAAGAAAACCCTTAAGTCTGTG‑CGACACAGGCTTAAGGG‑TTTCTACTCCATCTGGCGCTTATCTCCGGCACTCTCAGTGGCTTAGCTCTGGAAGGGGCg                                >  2:393639/1‑99 (MQ=255)

                                                                    tAAGAAAACCCTTAAGTCTGTG‑CGACACAGGCTTAAGGG‑TTTCTACCCCATCCGGCGCTTATCTCCGGCACTCTCAGTGGCTTAGCTCTTGAAGGGGCg                                <  1:3924655/99‑1 (MQ=255)

                                                                    tAAGAAAACCCTTAAGTCTGTG‑CGACACAGGCTTAAGGG‑TTTCTACCCCATCCGGCGCTTATCTCCGGCACTCTCAGTGGCTTAGCTCTTGAAGGGGCg                                >  1:2701259/1‑99 (MQ=255)

                                                                    tAAGAAAACCCTTAAGTCTGGG‑CGACACAGGCTTAAGGG‑TTTCTACCCCATCCGGCGCTTATCTCCGGCACTCGCAGTGGCTTAGCTCTTGAAGGGGCg                                <  2:3504917/99‑1 (MQ=255)

                                                                     aaGAAAACCCTTAAGTCTGTG‑CGACACAGGCTTAAGGG‑TTTCTACCCCATCCGGCGCTTATCTCCGGCACTCTCAGTGGCTTAGCTCTTGAAGGGGCGa                               <  2:3130165/99‑1 (MQ=255)

                                                                       gAAATCCCTTAAGTCTGTG‑CGACACAGGCTTAAGTG‑TTTCTACCCCATCCGGCGCTTATCTCCGGCACTCTCAGTGGCTTAGCTCTTGAAGGGGCGATa                             <  1:1633131/99‑1 (MQ=255)

                                                                        aaaaCCCTTAAGTCTGTG‑CGACACAGGCTTAAGGG‑TTTCTACCCCATCCGGCGCTTATCTCCGGCACTCTCAGTGGCTTAGCTCTTGAAGGGGCGATaa                            <  2:2792255/99‑1 (MQ=255)

                                                                            cccTTAAGTCTGTG‑CGACACAGGCTTAAGGG‑TTTCTACCCCATCCGGCGCTTATCTCCGGCACTCTCAGTGGCTTAGCTCTTGAAGGGGCGATAAGaat                        >  1:2057763/1‑99 (MQ=255)

                                                                            cccTTAAGCCTGTG‑TCGCACAGACTTAAGGG‑TTTCTACCCCATCCGGCGCTTATCTCCGGCACTCTCAGTGGCTTAGCTCTTGAAGGGGCGATAAGaat                        >  1:818043/1‑99 (MQ=37)

                                                                             ccTTAAGTCTGTG‑CGACACAGGCTTAAGGG‑TTTCTACCCCATCCGGCGCTTATCTCCGGCACTCTCAGTGGCTTAGCTCTTGAAGGGGCGATAAGaata                       <  1:2907870/99‑1 (MQ=255)

                                                                             ccTTAAGCCTGTGTCG‑CACAGACTTAAGGG‑TTTCTACCCCATCCGGCGCTTATCTCCGGCACTCTCAGTGGCTTAGCTCTTGAAGGGGCGATAAGaata                       >  1:1095752/1‑99 (MQ=37)

                                                                             ccTTAAGCCTGTGTCG‑CACAGACTTAAGGG‑TTTCTACCCCATCCGGCGCTTATCTCCGGCACTCTCAGTGGCTTAGCTCTTGAAGGGGCGATAAGaata                       >  2:2093704/1‑99 (MQ=37)

                                                                             ccTTAAGCCTGTGTCG‑CACAGACTTAAGGG‑TTTCTACCCCATCCGGCGCTTATCTCCGGCACTCTCAGTGGCTTAGCTCTTGAAGGGGCGATAAGaata                       >  1:569455/1‑99 (MQ=37)

                                                                             ccTTAAGCCCGTG‑TCGCACAGACTTACGGG‑TTTCTACCCCCTCCGGCGCTTATCTCCGGCACTCTCAGTGTCTTTTCTCTCGGAGGGGCGATAAGaata                       >  2:193653/1‑99 (MQ=19)

                                                                              cTTAAGTCTGTG‑CGACACAGGCTTAAGGG‑TTTCTACCCCATCCGGCGCTTATCTCCGGCACTCTCAGTGGCTTAGCTCTTGAAGGGGCGATAAGaataa                      <  2:3186878/99‑1 (MQ=255)

                                                                              cTTAAGCCTGTG‑TCGCACAGACTTAAGGGATTTCTACCCCATCCGGCGCTTATCTCCGGCACTCTCAGTGGCTTATCTCTGGAAGCTGCGATAAGtata                       >  2:1538913/1‑99 (MQ=21)

                                                                               ttAAGTCTGTG‑CGACACAGGCTTAAGGG‑TTTCTACCCCATCCGGCGCTTATCTCCGGCACTCTCAGTGGCTTAGCTCTTGAAGGGGCGATAAGaataat                     <  1:3820296/99‑1 (MQ=255)

                                                                                  aGTCTGTG‑CGACACAGGCTTAAGGG‑TTTCTACCCCATCCGGCGCTTATCTCCGGCACTCTCAGTGGCTTAGCTCTTGAAGGGGCGATAAGAATAAtctc                  <  1:2301087/99‑1 (MQ=255)

                                                                                  aGTCTGTG‑CGACACAAGCTTAAGGG‑TTTCTACCCCATCCGGCGCTTATCTCCGGCACTCTCAGTGGCTTATCTCTTTAAGGGGCGATAAGAATAAtctc                  <  2:7228/99‑1 (MQ=255)

                                                                                   gTCTGTG‑CGACACAGGCTTAAGGG‑TTTCTACCCCATCCTGCGCTTATCTCCGGCACTCTCAGTGGCTTAGCTCTTGAAGGGGCGATATGAATAATCTCa                 <  2:3707907/99‑1 (MQ=255)

                                                                                   gTCTGTG‑CGACACAGGCTTAAGGG‑TTTCTACCCCATCCGGCGCTTATCTCCGGCACTCTCAGTGGCTTAGCTCTTGAAGGGGCGATAAGAATAATCTCa                 <  1:1510070/99‑1 (MQ=255)

                                                                                       gtg‑CGACACAGGCTTAAGGG‑TTTCTACCCCATCCGGCGCTTATCTCCGGCACTCTCAGTGGCTTAGCTCTTGAAGGGGCGATAAGAATAATCTCATaaa             <  2:42543/99‑1 (MQ=255)

                                                                                         g‑CGACACAGGCTTAAGGG‑TTTCTACCCCATCCGGCGCTTATCTCCGGCACTCTCAGTGGCTTAGCTCTTGAAGGGGCGATAAGAATAATCTCATAAAGc           >  1:1011319/1‑99 (MQ=255)

                                                                                           cGACACAGGCTTAAGGG‑TTTCTACCCCATCCGGCGCTTATCTCCGGCACTCTCAGTGGCTTAGCTCTTGAAGGGGCGATAAGAATAATCTCATAAAGCt          <  1:76442/99‑1 (MQ=255)

                                                                                            gACACAGGCTTAAGGG‑TTTCTACCCCATCCGGCGCTTATCTCCGGCACTCTCAGTGGCTTAGCTCTTGAAGGGGCGATAAGAATAATCTCATAAAGCTa         >  2:180848/1‑99 (MQ=255)

                                                                                            gACACAGGCTTAAGGG‑TTTCTACCCCATCCGGCGCTTATCTCCGGCACTCTCAGTGGCTTAGCTCTTGAAGGGGCGATAAGAATAATCTCATAAAGCTa         >  2:2748980/1‑99 (MQ=255)

                                                                                               acaGGCTTAAGGG‑TTTCTACCCCATCCGGCGCTTATCTCCGGCACTCTCAGTGGCTTAGCTCTTGAAGGGGCGATAAGAATAATCTCATAAAGCTAAcc      <  2:2408431/99‑1 (MQ=255)

                                                                                               acaGGCTTAAGGG‑TTTCTACCCCATCCGGCGCTTATCTCCGGCACTCTCAGTGGCTTAGCTCTTGAAGGGGCGATAAGAATAATCTCATAAAGCTAAcc      >  1:465727/1‑99 (MQ=255)

                                                                                               acaGGCTTAAGGG‑TTACTACCCCATCCGGCGCTTATCTCCGGCACTCTCAGTGGCTTAGCTCTTGAAGGGGCGATAAGAATGATCTCATAAAGCTAAcc      <  2:898245/99‑1 (MQ=255)

                                                                                                 aGGCTTAAGGG‑TTTCTACCCCATCCGGCGCTTATCTCCGGCACTCTCAGTGGCTTAGCTCTTGAAGGGGCGATAAGAATAATCTCATAAAGCTAACccg    >  1:781680/1‑99 (MQ=255)

                                                                                                   gCTTAAGGG‑GTTCTACCCTATCCGTTGCTTATCTCCTGGCCTCTCAGTGGCTTACCTATTGAAGGGTCTATAATAATAATCTCATAAACCTAACccgcc  <  2:2910937/99‑1 (MQ=255)

TGAAAAAGAAAAAGTTGTATTGAAAATGACTATTTAAGAGATAGGTAAAAAAGTGCAGCGTTCAGAAATAAGAAAACCCTTAAGTCTGTG‑CGACACAGGCTTAAGGG‑TTTCTACCCCATCCGGCGCTTATCTCCGGCACTCTCAGTGGCTTAGCTCTTGAAGGGGCGATAAGAATAATCTCATAAAGCTAACCCGCC  >  NC_000913/1764603‑1764799

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`