| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 12,486 | 0 | G | A | 26.6% | 122.0 / 17.3 | 64 | Q108Q (CAG→CAA) | dnaK | chaperone Hsp70, with co‑chaperone DnaJ |
| Reads supporting (aligned to +/- strand): ref base G (39/8); new base A (0/17); total (39/25) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.84e-10 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.56e-01 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
CGAAGGCGATCGCACCACGCCTTCTATCATTGCCTATACCCAGGATGGTGAAACTCTAGTTGGTCAGCCGGCTAAACGTCAGGCAGTGACGAACCCGCAAAACACTCTGTTTGCG‑ATTAAACGCCTGATTGGTCGCCGCTTCCAGGACGAAGAAGTACAGCGTGATGTTTCCATCATG‑CCGTTCAAAATTATTGCTGCTGATAACGGCGACGC‑ATGGGTCGAAGTTAAAGGCCAG‑AAAA‑TGGCACCGCCGCAGATTTCTGCTGAAGTGCTGAAAAAAATGAAGAAAACCGCTGAAGATTACCTGGGTGAACCGGTAACTGAAGCTGTTATCACCGTACCGGCATACTTTAACGATGCTCAGCGTCAGGCAACCAAAGACGCAGGCCGTATCGCTGGTCTGGAAGTAAAACGTATCATCAACGAACCGACCGCAGCTGCGCTGGCTTACGGTCTGGACAAAGGCACTGGCAACC > NC_000913/12252‑12724 | cGAAGGCGATCGCACCACGCCTTCTATCATTGCCTATACCCAGGATGGTGAAACTCTAGTTGGTCAGCCGGCTAAACGTCAGGCAGTGACGAACCCGCAAAACACTCTGTTTGCG‑ATTAAACGCCTGATTGGTCGCCGCTTCCCGGACGAAGAAGTACAGCGTGATGTTTCCATCATG‑CCGTTCAAAATTATTGCTGCTGATAACGGCGACGC‑ATGGGTCGAAGTTAAAGGCCAG‑aaaa > 1:164799/1‑239 (MQ=255) aTCGCACCACGCCTTCTATCATTGCCTATACCCAGGATGGTGAAACTCTAGTTGGTCAGCCGGCTAAACGTCAGGCAGTGACGAACCCGCAAAACACTCTGTTTGCG‑ATTAAACGCCTGATTGGTCGCCGCTTCCAGGACGAAGAAGTACAGCGTGATGTTTCCATCATG‑CCGTTCAAAATTATTGCTGCTGATAACGGCGACGC‑ATGGGTCGAAGTTAAAGGCCAG‑ACAC‑TGGCAcc > 2:1094405/1‑238 (MQ=255) tCGCACCACGCCTTCTATCATTGCCTAAACCCAGGATGGGGAAACTCTAGTGGGTCAGCCGCCTAAACGCCAGGAAGGGCCGAACCCCCAAAACACTCTGTTTCCG‑ATTAAACGCCTGTTTGGTC‑CCGCCTCCCAGACGAAAAAGGACAAGCTGGAGTTTTCCTCAAGCCCGTCCAAAATTATTGTGCCTGAAAACGGC‑ACGCAATGGGCCGAAGTTAAAGGCAAG‑AAAT‑TGGAAccc > 2:1133277/1‑237 (MQ=255) ccTATACCCAGGATGGTGAAACTCTAGTTGGTCAGCCGGCTAAACGTCAGGCAGTGACGAACCCGCAAAACACTCTGTTTGCG‑ATTAAACGCCTGATTGGTCGCCGCTTCCAGGACGAAGAAGTACAGCGTGATGTTTCCATCATG‑CCGTTCAAAATTATTGCTGCTGATAACGGCGCCGC‑ATGGGTCGCAGTTAAAGGCCAG‑AAAA‑TGGCACCGCCGCAGACTTCTGCTGAAgg > 2:1062507/1‑234 (MQ=255) ggATGGTGAAACTCTAGTTGGTCAGCCGGCTAAACGTCAGGCAGTGACGAACCCGCAAAACACTCTGTTTGCG‑ATTAAACGCCTGATTGGTCGCCGCTTCCAGGACGAAGAAGTACAGCGTGATGTTTCCATCATG‑CCGTTCAAAATTATTGCTGCTGATAACGGCGACGC‑ATGGGTCGAAGTTAAAGGCCAG‑AAAA‑TGGCACCGCCGCAGATTTCTGCTGAAGTGCTGAAAAAAATga > 1:827851/1‑239 (MQ=255) ggATGGTGAAACTCTAGTTGGTCAGCCGGCTAAACGTCAGGCAGTGACGAACCCGCAAAACACTCTGTTTGCG‑ATTAAACGCCTGATTGGTCGCCGCTTCCAGGACGAAGAAGTACAGCGTGATGTTTCCATCATG‑CCGTTCAAAATTATTGCTGCTGATAACGGCGACGC‑ATGGGTCGAAGTTAAAGGCCAG‑AAAA‑TGGCACCGCCGCAGATTTCTGCTGAAGTGCTGAAAAAAATga > 1:1349469/1‑239 (MQ=255) ggATGGTGAAACTCTAGTTGGTCAGCCGGCTAAACGTCAGGCAGTGACGAACCCGCAAAACACTCTGTTTGCG‑ATTAAACGCCTGATTGGTCGCCGCTTCCAGGACGAAGAAGTACAGCGTGATGTTTCCATCATG‑CCGTTCAAAATTATTGCTGCTGATAACGGCGACGC‑ATGGGTCGAAGTTAAAGGCCAG‑AAAA‑TGGCACCGCCGCAGATTTCTGCTGAAGTGCTGAAAAAAATga > 1:483146/1‑239 (MQ=255) gATGGTGAAACTCTAGTTGGTCAGCCGGCTAAACGTCAGGCAGTGACGAACCCGCAAAACACTCTGTTTGCG‑ATTAAACGCCTGATTGGTCGCCGCTTCCAGGACGAAGAAGTACAGCGTGATGTTTCCATCATG‑CCGTTCAAAATTATTGCTGCTGATAACGGCGACGC‑ATGGGTCGAAGTTAAAGGCCAG‑AAAA‑TGGCACCGCCGCAGATTTCTGCTGAAGTGCTGAAAAAAATgaa > 1:1055282/1‑239 (MQ=255) ggTGAAACTCTAGTTGGTCAGCCGGCTAAACGTCAGGCAGTGACGAACCCGCAAAACACTCTGTTTGCG‑ATTAAACGCCTGATTGGTCGCCGCTTCCAGGACGAAGAAGTACAGCGTGATGTTTCCATCATG‑CCGTTCAAAATTATTGCTGCTGATAACGGCGACGC‑ATGGGTCGAAGTTAAAGGCCAG‑AAAA‑TGGCACCGCCGCAGATTTCTGCTGAAGTGCTGAAAAAAATgaagaa > 1:479211/1‑239 (MQ=255) ggTGAAACTCTAGTTGGTCAGCCGGCTAAACGTCAGGCAGTGACGAACCCGCAAAACACTCTGTTTGCG‑ATTAAACGCCTGATTGGTCGCCGCTTCCAGGACGAAGAAGTACAGCGTGATGTTTCCATCATG‑CCGTTCAAAATTATTGCTGCTGATAACGGCGACGC‑ATGGGTCGAAGTTAAAGGCCAG‑AAAA‑TGGCACCGCCGCAGATTTCTGCTGAAGTGCTGAAAAAAATgaagaa > 1:433297/1‑239 (MQ=255) tGAAACTCTAGTTGGTCAGCCGGCTAAACGTCAGGCAGTGACGAACCCGCAAAACACTCTGTTTGCG‑ATTAAACGCCTGATTGGTCGCCGCTTCCAGGACGAAGAAGTACAGCGTGATGTTTCCATCATG‑CCGTTCAAAATTATTGCTGCTGATAACGGCGACGC‑ATGGGTCGAAGTTAAAGGCCAG‑AAAA‑TGGCACCGCCGCAGATTTCTGCTGAAGTGCTGAAAAAAATGAAGaaa > 1:1408496/1‑238 (MQ=255) tGAAACTCTAGTTGGTCAGCCGGCTAAACGTCAGGCAGTGACGAACCCGCAAAACACTCTGTTTGCG‑ATTAAACGCCTGATTGGTCGCCGCTTCCAGGACGAAGAAGTACAGCGTGATGTTTCCATCATG‑CCGTTCAAAATTATTGCTGCTGATAACGGCGACGC‑ATGGGTCGAAGTTAAAGGCCAG‑AAAA‑TGGCACCGCCGCAGATTTCTGCTGAAGTGCTGAAAAAAATAAAGaaa > 1:1060791/1‑238 (MQ=255) tGAAACTCTAGTTGGTCAGCCGGCTAAACGTCAGGCAGTGACGAACCCGCAAAACACCCTGTTTGCG‑ATTAAACGCCTGATTGGTCGCCGCTTCCAGGACGAAGAAGTACAGCGTGATGTTTCCATCATG‑CCGTTCAAAATTATTGCTGCTGATAACGGCGACGC‑ATGGGTCGAAGTTAAAGGCCAG‑AAAA‑TGGCACCGCCGCAGATTTCTGCTGAAGGGCTGAAAAAAATGAAGaaa > 1:205337/1‑238 (MQ=255) ctctgtttgtacAGCCGGATAAACGTCAGGCAGTGACGAACCCGCAAAACCCTCTGTTTGCG‑ATTAAACGCCTGATTGGTCGCCGCTTCAAGGACGAAGAAGTACAGCGTGATGTTTCCATCATG‑CCGTAAAAAATTATTGCTGCTGATACCGGCGACGC‑AGGGGTCGAAGTTAAAGGCAAA‑AAAA‑GGGCACCGCCGCAGATTTCTGCTGAAGTGCTGAAAAAAATGAAGAAAACCGCt < 2:1041440/228‑1 (MQ=255) gTTGGTCAGCCGGCTAAACGTCAGGCAGTGACGAACCCGCAAAACACTCTGTTTGCG‑ATTAAACGCCTGATTGGTCGCCGCTTCCAGGACGAAGAAGTACAGCGTGATGTTTCCATCATG‑CCGTTCAAAATTATTGCTGCTGATAACGGCGACGC‑ATGGGTCGAAGTTAAAGGCCAG‑AAAA‑TGGCACCGCCGCAGATTTCTGCTGAAGTGCTGAAAAAAATGAAGAAAACCGCTGAAGa > 1:781177/1‑239 (MQ=255) gtgTCAGCCGGCAAAACGTCGGGCAGTGAAGAACCCGAAAAACGCTCTGTTTGGA‑ATTAAACGCCTGATTGGTGGCCGCTTCCAGGGCGAAGAAGTACGGCGTGATGTTTCCATCATG‑CCTTACAAAATTATTGCTGCGGAAAACGGCGACGA‑ATGGGTGGAAGTAAAAGGCAAA‑AAAA‑TGGCACCGCCGCAGATTTCTGCTGAAGTGCTGAAAAAAATGAAGAAAACCGCTGaa < 2:438773/233‑1 (MQ=255) tCAGCCGACTACACGTCAGGCGGTGCCGAACCCGCAAACCACTC‑GTTTGGGTATTAACCGCGTGATTGGTCGCCCCTTCCAGGACGAAGAAGTACAGCGTGTTGTTTCCTTCATG‑CCGTTAAAAATTATTGCTGCTGATAACGGCGACGA‑ATGGGTCGAAGTAAAAGGCAAG‑AAAA‑TGGAACCGCCGCAGATTTCTGCTGAAGTGCTGAAAAAAATGAAGAAAACCGCTGAAGATTAc < 2:989195/238‑1 (MQ=255) ggcaaaaccgccAGACAGTGCCAGACCCCCAAAACACTCTGTTTGCA‑ATGAACCTCCTGGTTGTTCGCCGCTCCCAGGACAAAGAAGGACAGGGTGATGTTTCCATCATG‑CCGTAAAAAATTATTGCTGCTGATAACGGCGACGC‑ATGGGTCGAATTAAAAGGCCAA‑AAAA‑TGCCACCGCCGCAGATTTCTGCTGAAGTGCTGAAAAAAATGAAGAAAACCGCTGAAGATTACCTGGGt < 2:407410/228‑1 (MQ=255) ttAACCGTCGGGCAGTGCCGACCCCGAAAAACACTGTGTTTGAT‑TTAAATCGCCTGATGGGTGGCCGTTTCGAGGACGAAGAAGTACAGGGGGTTGTTTCCATCCTG‑CCGTTAAAAATTATTGCTGCTGATACCGGGGAGGC‑GTGGGTCGAAGTAAAAGGCAAA‑AAAA‑TGACACCGCCGCAGATTTCTGCTGAAGTGCTGAAAAAAATGAAGAAAACCGCTGAAGATTACCTGGGTGa < 2:1213444/237‑1 (MQ=255) cTAAACGTCAGGCAGTGACGACCCCGCAAAACACTCTGTTGGCG‑ATTAAGCGCCTGATTGGTCGCCGCTTCCAGGACGAAGAAGTACAGGGGGATGTTTCCATCATG‑CCGTTAAAAATTATGGCTGTTGATACGGGCGACGA‑GGGGGTAGAAGTTAAAGGCCAA‑AAAA‑GGGCACCGCCGCAGATTTCTGCTGAAGTGCTGAAAAAAATGAAGAAAACCGCTGAAGATTACCTGGGTGa < 2:433297/238‑1 (MQ=255) gACGAACCCGCAAAACACTCTGTTTGCG‑ATTAAACGCCTGATTGGTCGCCGCTTCCAGGACGAAGAAGTACAGCGTGATGTTTCCATCATG‑CCGTTCAAAATTATTGCTGCTGATAACGGCGACGC‑ATGGGTCGAAGTTAAAGGCCAG‑AAAA‑TGGCACCGCCGCAGATTTCTGCTGAAGTGCTGAAAAAAATGAAGAAAACCGCTGAAGATTACCTGGGTGAACCGGTAACTGaa > 1:1411929/1‑235 (MQ=255) gCAAAACACTCTGTTTGCG‑ATTAAACGCCTGATTGGTCGCCGCTTCCAGGACGAAGAAGTACAGCGTGATGTTTCCATCATG‑CCGTTCAAAATTATTGCTGCTGATAACGGCGACGC‑ATGGGTCGAAGTTAAAGGCCAG‑AAAA‑TGGCACCGCCGCAGATTTCTGCTGAAGTGCTGAACAAAATGAAGAAAACCGCTGAAGATTACCTGGGTGAACCGGTAACTGAAGCTGTAATc > 2:1186854/1‑235 (MQ=255) gCAAAACACTCTGTTTGCG‑ATTAAACGCCTGATTGGTCGCCGCTTCCAGGACGAAGAAGTACAGCGTGATGTTTCCATCATG‑CCGTTCAAAATTATTGCTGCTGATAACGGCGACGC‑ATGGGTCGAAGTTAAAGGCCAG‑AAAA‑TGGCACCGCCGCAGATTTCTGCTGAAGTGCTGAAAAAAATGAAGAAAACCGCTGAAGATTACCTGGGTGAACCGGTAACTGAAGCTGTTacc > 1:1383538/1‑233 (MQ=255) aaaCGCTCTGTTTGCG‑ATTAAACGCCTGATTGGTCGCCGCTTCCAGGACGAAGAAGTACAGCGTGATGTTTCCATCATG‑CCTTTCAAAATTATTGCTGCTGATAACGGCGACGC‑ATGGGTCGAAGTTAAAGGCAAG‑AAAA‑TGGCACCGCCGCAGATTTCTGCTGAAGTGCTGAAAAAAATGAAGAAAACCGCTGAAGATTACCTGGGTGAACCGGTAACTGAAGCTGTTATCACCGTAc < 1:1133277/239‑1 (MQ=255) tctgttttGCG‑ATTAACGGCTTGATGGGTCGCCGCTTCCAGCACGAAGAAGTCCGGGGTGATGTTTCCATCGTG‑CCTTTAAAAATTATTGCTGCTAATAGCGGCGACGC‑GTGGGGCAAAGTAAAAGGCAAA‑AAAA‑TGGCACCGCCGCAGATTTCTGCTGAAGTGCTGAAAAAAATGAAGAAAACCGCTGAAGATTACCTGGGTGAACCGGTAACTGAAGCTGTTATCACCGTACCGGCa < 2:1110980/234‑1 (MQ=255) gTTTGCG‑ATTAAACGCCTGATTGGTCGCCGCTTCCAGGACGAAGAAGTACAGCGTGATGTTTCCATCATG‑CCGTTCAAAATTATTGCTGCTGATAACGGCGACGC‑ATGGGTCGAAGTTAAAGGCCAG‑AAAA‑TGGCACCGCCGCAGATTTCTGCTGAAGTGCTGAAAAAAATGAAGAAAACCGCTGAAGATTACCTGGGTGAACCGGTAACTGAAACTGTTAt > 1:672062/1‑222 (MQ=255) tttGCG‑ATTAAACGCTTGATTGGCCGACGTTTACAAGACGAAGAAGAACAGCGGGATGTCTCTACCGTG‑AAGAAAAAAATTATTGTCGATGACACGGGCGACGT‑GGGGGACGAAGTTAAAGGCCAA‑AAAA‑GGGAACCGCCGCAGATTTCTGCTGAAGTGCTGAAAAAAATGAAGAAAACCGCTGAAGATTACCTGGGTGAACCGGTAACTGAAg < 2:283627/214‑1 (MQ=255) aTTAAACGCCTGATTGGTCGCCGCTTCCAGGACGAAGAAGTACAGCGTGATGTTTCCATCATG‑CCGTTCAAAATTATTGCTGCTGATAACGGCGACGC‑ATGGGTCGAAGTTAAAGGCCAG‑AAAA‑TGGCACCGCCGCAGATTTCTGCTGAAGTGCTGAAAAAAATGAAGAAAACCGCTGAAGATTACCTGGGGGAACCGGTAACTGAAGCTGTTATCACCGAACCGGCATACTTTAACGa > 1:517664/1‑239 (MQ=255) aaCGCCTGATTGGTCGCCGCTTCCAGGACGAAGAAGTACAGCGTGATGTTTCCATCATG‑CCGTTCAAAATTATTGCTGCTGATAACGGCGACGC‑ATGGGTCGAAGTTAAAGGCCAG‑AAAA‑TGGCACCGCCGCAGATTTCTGCTGAAGTGCTGAAAAAAATGAAGAAAACCGCTGAAGATTACCTGGGTGAACCGGTAACTGAAGCTGTTATCAc > 1:283627/1‑214 (MQ=255) aaCGCCTGATTGGTCGCCGCTTCCAGGACGAAGAAGTACAGCGTGATGTTTCCATCATG‑CCGTTCAAAATTATTGCTGCTGATAACGGCGACGC‑ATGGGTCGAAGTTAAAGGCCAG‑AAAA‑TGGCACCGCCGCAGATTTCTGCTGAAGTGCTGAAAAAAATGAAGAAAACCGCTGAAGATTACCTGGGTGAACCGGTAACTGAAGCTGTTATCACCGTACCGGCATACTTTAACGATGCt > 1:416574/1‑239 (MQ=255) gATTGGTCGCCGCTTCCAGGACGAAGAAGTACAGCGTGATGTTTCCATCATG‑CCGTTCAAAATTATTGCTGCTGATAACGGCGACGC‑ATGGGTCGAAGTTAAAGGCCAG‑AAAA‑TGGCACCGCCGCAGATTTCTGCTGAAGTGCTGAAAAAAATGAAGAAAACCGCTGAAGATTACCTGGGTGAACCGGTAACTGAAGCTGTTATCACCGTACCGGCATACTTTAACGaaggcaagggcc > 2:832242/1‑228 (MQ=255) gccgcTTCCAGGACGAAGAAGTACAGCGTGATGTTTCCATCATG‑CCGTTCAAAATTATTGCTGCTGATAACGGCGACGC‑ATGGGTCGAAGTTAAAGGCCAG‑AAAA‑TGGCACCGCCGCAGATTTCTGCTGAAGTGCTGAAAAAAATGAAGAAAACCGCTGAAGATTACCTGGGTGAACCGGTAACTGAAGCTGTTATCACCGTACCGGCATACTTTAACGATGCTCAGCGTCAGGCAAcc > 1:737901/1‑239 (MQ=255) ccgcTACGAGGAAGAAAAACTCCATGGTGATGTTTCCATCATG‑CCGTTAAAAATTATTGCTGCTGATAACGGCGACGC‑ATGGGTCGAGTTTAAAGGACAA‑AAAA‑GGGCACCGCCGCAGATTTCTGCTGAAGTGCTGAAAAAAATGAAGAAAACCGCTGAAGATTACCTGGGTGAACCGGTAACTGAAGCTGTTATCACCGTACCGGCATACTTTAACGATGCTCAGCGTCAGGCAACCa < 2:1411929/239‑1 (MQ=255) ccAGGAAGAAGAGGTACAGGTTATTGTTTCCAACATG‑CCGTTAAAAATTATTGCGGCTGATAAGGGCGAAGC‑AGGGGTAAAAGTAAAGGGCAAG‑AAAA‑TGGCACCGCCGCAGATTTCTGCTGAAGTGCTGAAAAAAATGAAGAAAACCGCTGAAGATTACCTGGGTGAACCGGTAACTGAAGCTGTTATCACCGTACCGGCATACTTTAACGATGCTCAGCGTCAGGCAACCAAAGACg < 2:781177/239‑1 (MQ=255) tacggggTGATGTTTCCATCTTG‑CCGTAAAAAATTATGGCTGCGAATAAGGGCGAGGC‑ATGGGTCGAATTAAAAGGCAAA‑AAAA‑GGGCACCGCCGCAGATTTCTGCTGAAGTGCTGAAAAAAATGAAGAAAACCGCTGAAGATTACCTGGGTGAACCGGTAACCGAAg < 2:598493/162‑1 (MQ=255) ccAGTGTGATGTTGCCATCAGT‑CCGTAAAAAATGTGTGCTGCTAATACGGGCGACGC‑GGGGGTAGAAGTAAAAGGCAAA‑AAAA‑TGGCACCGCCGCAGATTTCTGCTGAAGTGCTGAAAAAAATGAAGAAAACCGCTGAAGATTACCTGGGTGAACCGGTAACTGAAGCTGTTATCACCGTACCGGCATACTTTAACGATGCTCAGCGTCAGGCAACCAAAGACGCAGGCCGTATCGc < 2:1349469/236‑1 (MQ=255) cGTGATGTTTCCATCATG‑CCGTTCAAAATTATTGCTGCTGATAACGGCGACGC‑ATGGGTCGAAGTTAAAGGCCAG‑AAAA‑TGGCACCGCCGCAGATTTCTGCTGAAGTGCTGAAAAAAATGAAGAAAACCGCTGAAGATTACCTGGGTGAACCGGTAACTGAAGCTGTTATCACCGTACCGGCATACTTTAACGATGCTCAGCGTCAGGCAACCAAAGACGCAGGCCGTATCGCTgg > 1:927889/1‑236 (MQ=255) gTGATGGTTCCATCATG‑CCGTTCAAAATTATTGCTGCTGATAACGGCGACGC‑ATGGGTCGAAGTTAAAGGCCAG‑AAAA‑TGGCACCGCCGCAGATTTCTGCTGAAGTGCTGAAAAAAATGAAGAAAACCGCTGAAGATTACCTGGGTGAACCGGTAACTGAAGCTGTTATCAACGAACCGGCATACTTTAACGATGCTCAGCGTCAGGCAACCAAAGACGCAGGCCGTATCGCTgg > 1:741003/1‑235 (MQ=255) tGATGTTTCCATCATG‑CCGTTCAAAATTATTGCTGCTGATAACGGCGACGC‑ATGGGTCGAAGTTAAAGGCCAG‑AAAA‑TGGCACCGCCGCAGATTTCTGCTGAAGTGCTGAAAAAAATGAAGAAAACCGCTGAAGATTACCTGGGTGAACCGGTAACTGAAGCTGTTATCACCGTACCGGCATACTTTAAc > 1:156328/1‑190 (MQ=255) tGATGTTTCCATCATG‑CCGTTCAAAATTATTGCTGCTGATAACGGCGACGC‑ATGGGTCGAAGTTAAAGGCCAG‑AAAA‑TGGCACCGCCGCAGATTTCTGCTGAAGTGCTGAAAAAAATGAAGAAAACCGCTGAAGATTACCTGGGTGAACCGGTAACTGAAGCTGTTATCACCGTACCGGCATACTTTAACGATGCTCAGCGTCAGGCAAACAAAGACGCAGGCCGTATCGCTGGTCTgg > 1:601787/1‑239 (MQ=255) tGTTTCCATCATG‑CCGTTCAAAATTATTGCTGCTGATAACGGCGACGC‑ATGGGTCGAAGTTAAAGGCCAG‑AAAA‑TGGCACCGCCGCAGATTTCTGCTGAAGTGCTGAAAAAAATGAAGAAAACCGCTGAAGATTACCTGGGTGAACCGGTAACTGAAGCTGTTACCACCGTACCGGCATACTTTAACGATGCTCAGCGTCAGGCAACCCAAGACGCATGCCGTATCGATGGTCTGGaa > 1:551195/1‑238 (MQ=255) tGTTTCCATCATG‑CCGTTCAAAATTATTGCTGCTGATAACGGCGACGC‑ATGGGTCGAAGTTAAAGGCCAG‑AAAA‑TGGCACCGCCGCAGATTTCTGCTGAAGTGCTGAAAAAAATGAAGAAAACCGCTGAAGATTACCTGGGTGAACCGGTAACCGAAGCTGTTATCAc > 1:598493/1‑168 (MQ=255) atG‑CCGTTCAAAATTATTGCTGCTGATAACGGCGACGC‑ATGGGTCGAAGTTAAAGGCCAG‑AAAA‑TGGCACCGCCGCAGATTTCTGCTGAAGTGCTGAAAAAAATGAAGAAAACCGCTGAAGATTACCTGGGTGAACCGGTAACTGAAGCTGTTATCACCGTACCGGCATACTTTAACGATGCTCAGCGTCAGGCAACCAAAGACGCAGGCCGTATCGCTGGTCTGGAAGTAAAACGTa > 1:1081157/1‑238 (MQ=255) aataatGGCGGCTGAAACCGGCGACGC‑TTGGGCGGAAGTAAAAGGCAAA‑AAAA‑TGGCACCGCCGCAGATTTCTGCTGAAGTGCTGAAAAAAATGAAGAAAACCGCTGAAGATTACCTGGGTGAACCGGTAACTGAAGCTGTTATCACCGTACCGGCATACTTTAACGATGCTCAGCGt < 2:372725/178‑1 (MQ=255) ttGCTGCTGATAACGGCGACGC‑ATGGGTCGAAGTTAAAGGCCAG‑AAAA‑TGGCACCGCCGCAGATTTCTGCTGAAGTGCTGAAAAAAATGAAGAAAACCGCTGAAGATTACCTGGGTGAACCGGTAACTGAAGCTGTTATCACCGTACCGGCATACTTTAACGATGCTCAGCGTCAGGCAACCAAAGACGCAGGCCGTATCGCTGGTCTGGAAGTaaa > 1:355234/1‑217 (MQ=255) ttGCTGCTGATAACGGCGACGC‑ATGGGTCGAAGTTAAAGGCCAG‑AAAA‑TGGCACCGCCGCAGATTTCTGCTGAAGTGCTGAAAAAAATGAAGAAAACCGCTGAAGATTACCTGGGTGAACCGGTAACTGAAGCTGTTATCACCGTACCGGCATACTTTAACGATGCTCAGCGTCAGGCAACCAAAGACGCAGGCCGTATCGCTGGACTGGAAGTAAAACGTatcat > 1:1181655/1‑226 (MQ=255) gctgATAACGGCGACGC‑ATGGGTCGAAGTTAAAGGCCAG‑AAAA‑TGGCACCGCCGCAGATTTCTGCTGAAGTGCTGAAAAAAATGAAGAAAACCGCTGAAGATTACCTGGGTGAACCGGTAACTGAAGCTGTTATCACCGTACCGGCATACTTTAACGATGCTCAGCGTCAGGCAACCa > 1:372725/1‑178 (MQ=255) cGACGC‑ATGGGTCGAAGTTAAAGGCCAG‑AAAA‑TGGCACCGCCGCAGATTTCTGCTGAAGTGCt > 2:30894/1‑63 (MQ=255) cGACGC‑ATGGGTCGAAGTTAAAGGCCAG‑AAAA‑TGGCACCGCCGCAGATTTCTGCTGAAGTGCTGAAAAAAATGAAGAAAACCGc > 2:1258725/1‑84 (MQ=255) cGACGC‑ATGGGTCGAAGTTAAAGGCCAG‑AAAA‑TGGCACCGCCGCAGATTTCTGCTGAAGTGCTGAAAAAAATGAAGAAAACCGc < 1:1258725/84‑1 (MQ=255) cGACGC‑AGGGGTAGAAGTAAAAGGCCAA‑AAAA‑GGGCACCGCCGCAGATTTCTGCTGAAGTGCTGAAAAAAATGAAGAAAACCGCTGAAGATTACCTGGGTGAACCGGTAACTGAAGCTGTTATCACCGTACCGGCATACTTTAACGATGCTCAGCGTCAGGCAACCAAAGACGCAGGCCGTATCGCTGGTCTGGAAGTAAAACGTATCATCAACGAACCGACCGCAGCTgcg < 2:927889/232‑1 (MQ=255) cgagtagtGGGGCAAAGTAAAAGGCCAA‑AAAG‑TGGCACCGCCGCAGATTTCTGCTGAAGTGCTGAAAAAAATGAAGAAAACCGCTGAAGATTACCGGGGTGAACCGGTAACTGAAGCTGTTATCACCGTACCGGCATACTTTAACGATGCTCAGCGTCAGGCAACCAAAGACGCAGGCCGTATCGCTGGTCTGGAAGTAAAACGTATCATCAACGAACCGACCGCAGCTgcg < 2:765170/225‑1 (MQ=255) gacgatggggTAGAAGTAAAAGGCAAA‑AAAA‑TGGCACCGCCGCAGATTTCTGCTGAAGTGCTGAAAAAAATGAAGAAAACCGCTGAAGATTACCTGGGTGAACCGGTAACTGAAGCTGTTATCACCGTACCGGCATACTTTAACGATGCTCAGCGTCAGGCAACCAAAGACGCAGGCCGTATCGCTGGTCTGGAAGTAAAACGTATCATCAACGAACCGACCGCAGCTGCGCTGGCtt < 1:186859/231‑1 (MQ=255) cGC‑ATGGGTCGAAGTTAAAGGCCAG‑AAAA‑TGGCACCGCCGCAGATTTCTGCTGAAGTGCTGAAAAAAATGAAGAAAACCGCTGAAGATTACCTGGGTGAACCGGTAACTGAAGCTGTTATCACCGTACCGGCATACTTTAACGATGCTCAGCGTCAGGCAACCAAAGACGCAGGCCGTATAGCTGGTCTGGAAGTAAAACGTATCATCAACGAACCGACCGCAGCCGCGCTGGCTTaag > 2:480903/1‑237 (MQ=255) c‑ATGGGTCGAAGTTAAAGGCCAG‑AAAA‑TGGCACCGCCGCAGATTTCTGCTGAAGTGCTGAAAAAAATGAAGAAAACCGCTGaa > 2:23713/1‑83 (MQ=255) c‑ATGGGTCGAAGTTAAAGGCCAG‑AAAA‑TGGCACCGCCGCAGATTTCTGCTGAAGTGCTGAAAAAAATGAAGAAAACCGCTGaa < 1:23713/83‑1 (MQ=255) gtGGGTCGAAGTAAAGGGCAAA‑AAAA‑TGCCCCCGCCGCAGATTTCTGCTGAAGTGCTGAAAAAAATGAAGAAAACCGCTGAAGATTACCTGGGTGAACCGGTAACTGAAGCTGTTATCACCGTACCGGCATACTTTAACGATGCTCAGCGTCAGGCAACCAAAGACGCAGGCCGTATCGCTGGTCTGGAAGTAAAACGTATCATCAACGAACCGACCGCAGCTGCGCTGGCTTACGGt < 1:672941/237‑1 (MQ=255) tgtgcgaGTTAAAAGACAA‑AAAAGGGGCACCGCCGCAGATTTCTGCTGAAGTGCTGAAAAAAATGAAGAAAACCGCTGAAGATTACCTGGGTGAACCGGTAACTGAAGCTGTTATCACCGTACCGGCATACTTTAACGATGCTCAGCGTCAGGCAACCAAAGACGCAGGCCGTATCGCTGGTCTGGAAGTAAAACGTATCATCAACGAACCGACCGCAGCTGCGCTGGCTTACGGTc < 2:1081157/231‑1 (MQ=255) gtaaaaGTAAAAGGCAAA‑AAAA‑GGCCCCCGCCGCAGATTTCTGCTGAAGTGCTGAAAAAAATGAAGAAAACCGCTGAAGATTACCTGGGTGAACCGGTAACTGAAGCTGTTATCACCGTACCGGCa < 2:99016/122‑1 (MQ=255) aaaggaaagggCAAG‑AAAA‑GGGCACCGCCGCAGATTTCTGCTGAAGTGCTGAAAAAAATGAAGAAAACCGCTGAAGAGTACCTGGGTGAACCGGTAACTGAAGCTGTTATCACCGTCCCGGCATACTTTAACGATGCTCAGCGTCAGGCAACCAAAGACGCAGGCCGTATCGCTGGTCTGGAAGTAAAACGTATCATCAACGAGCCGACCGCAGCTGCGCTGGCTTACGGTCTGGACa < 2:517664/229‑1 (MQ=255) gtgaaGGACAGAAAAA‑GGGCCCCGCCGCAGATTTCGGCTGAAGTGCTGAAAAAAATGAAGAAAACCGCTGAAGATTACCTGGGTGAACCGGTAACTGAAGCTGTTATCACCGTACCGGCATACTTTAACGATGCTCAGCGTCAGGCAACCAAAGACGCAGGCCGTATCGCTGGTCTGGAAGTAAAACGTATCATCAACGAACCGACCGCAGCTGCGCTGGCtt < 2:616955/220‑1 (MQ=255) aaaaGGCAAG‑AAAT‑GGACACCGCCGCAGATTTCTGCTGAAGTGCTGAAAAAAATGAAGAAAACCGCTGAAGATTACCTGGGTGAACCGGTAACTGAAGCTGTTATCACCGTACCGGCATACTTTAACGGTGCTCAGCGTCAGGCAACCAAAGACGCAGGCCGTATCGCTGGTCTGGAAGTAAAACGTATCATCAACGAACCGACCGCAGCTGCGCTGGCTTACGGTCTGGACAAAGGCa < 2:1288022/238‑1 (MQ=255) aaaGGCCAG‑AAAA‑TGGCACCGCCGCAGATTTCTGCTGAAGTGCTGAAAAAAATGAAGAAAACCGCTGAAGATTACCTGGGTGAACCGGTAACTGAAGCTGTTATCACCGTACCGGCATACTTTAACGATGCTCAGCGTCAGGCAACCAAAGACGCAGGCCGTATCGCTGGTCTGGAAGTAAAACGTATCATCCACGAACCGACAGTAGCTGGGCTGGGCTACGTTCTGGACAAAgac > 2:950850/1‑235 (MQ=255) aaGGCCAG‑AAAA‑TGGCACCGCCGCAGATTTCTGCTGAAGTGCTGAAAAAAATGAAGAAAACCGCTGAAGATTACCTGGGTGAACCGGTAACTGAAGCTGTTATCACCGTACCGGCATACTTTAACg > 1:99016/1‑126 (MQ=255) g‑AAAA‑TGGCACCGCCGCAGATTTCTGCTGAAGTGCTGAAAAAAATGAAGAAAACCGCTGAAGATTACCTGGGTGAACCGGTAACTGAAGCTGTTATCACCGTACCGGCATACTTTAACGATGCTCAGCGTCAGGCAACCAAAGACGCAGGCCGTATCGCTGGTCTGGAAGTAAAACGTat > 2:1406416/1‑180 (MQ=255) g‑AAAA‑TGGCACCGCCGCAGATTTCTGCTGAAGTGCTGAAAAAAATGAAGAAAACCGCTGAAGATTACCTGGGTGAACCGGTAACTGAAGCTGTTATCACCGTACCGGCATACTTTAACGATGCTCAGCGTCAGGCAACCAAAGACGCAGGCCGTATCGCTGGTCTGGAAGTAAAACGTATCATCAACGAACCGACCGCAGCTGCGCTGGCTTACGGTCTGGa > 1:616955/1‑222 (MQ=255) g‑AAAA‑TGGCACCGCCGCAGATTTCTGCTGAAGTGCTGAAAAAAATGAAGAAAACCGCTGAAGATTACCTGGGTGAACCGGTAACTGAAGCTGTTATCACCGTACCGGCATACTTTAACGATGCTCAGCGTCAGGCAACCAAAGACGCAGGCCGTATCGCTGGTCTGGAAGTAAAACGTATCATCAACGAACCGACCGCAGCTGCGCTGGCTTACGGTCTGGGCAAAGGCCATGGCAAcc > 2:1195054/1‑239 (MQ=255) | CGAAGGCGATCGCACCACGCCTTCTATCATTGCCTATACCCAGGATGGTGAAACTCTAGTTGGTCAGCCGGCTAAACGTCAGGCAGTGACGAACCCGCAAAACACTCTGTTTGCG‑ATTAAACGCCTGATTGGTCGCCGCTTCCAGGACGAAGAAGTACAGCGTGATGTTTCCATCATG‑CCGTTCAAAATTATTGCTGCTGATAACGGCGACGC‑ATGGGTCGAAGTTAAAGGCCAG‑AAAA‑TGGCACCGCCGCAGATTTCTGCTGAAGTGCTGAAAAAAATGAAGAAAACCGCTGAAGATTACCTGGGTGAACCGGTAACTGAAGCTGTTATCACCGTACCGGCATACTTTAACGATGCTCAGCGTCAGGCAACCAAAGACGCAGGCCGTATCGCTGGTCTGGAAGTAAAACGTATCATCAACGAACCGACCGCAGCTGCGCTGGCTTACGGTCTGGACAAAGGCACTGGCAACC > NC_000913/12252‑12724 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 7 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |