| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,101,514 | 0 | G | T | 37.2% | 154.1 / 52.5 | 78 | intergenic (+84/‑176) | sodA/kdgT | superoxide dismutase, Mn/2‑keto‑3‑deoxy‑D‑gluconate transporter |
| Reads supporting (aligned to +/- strand): ref base G (4/45); new base T (29/0); total (33/45) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.94e-17 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
GCGCTTCCGGCTTCCCGATTATGGGCCTGGATGTGTGGGAACATGCTTACTACCTGAAATTCCAGAACCGCCGTCCGGACTACATTAAAGAGTTCTGGAACGTGGTGAACTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGC‑GGT‑GGTTTTTTTGTGATCAATTTCA‑AAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGATCACTTTTATTGATTAAATGAATGTCTATC‑TTCGTTTCCATCAACACTGATGCTCCATTGAGGAATTACGCATCAGCCCTTAAAAATATGCCGACAGGTGATGGAAATGCAGATAAAACG > NC_000913/4101282‑4101703 | gcgcTTCCGGCTTCCCGATTATGGGCCTGGATGTGTGGGAACATGCTTACTACCTGAAATTCCAGAACCGCCGTCCGGACTACATTAAAGAGTTCTGGAACGTGGTGAACTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGC‑GGT‑GGTTTTTTTTTGATCa > 1:259614/1‑239 (MQ=255) tCCGGCTTCCCGATTAGGGGCCTGGATGTGTGGGAACATGCTTACTTCCTGAAATTCCAGAACCGCCGTCCGGACTACATTAAAGAGTTCTGGAACGTGGTGAACTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGC‑GGT‑GGTTTTTTTGTGATCAATTTc < 2:1737245/239‑1 (MQ=255) tCCCGATTATGGGCCTGGATGTGTGGGAACATGCTTACTACCTGAAATTCCAGAACCGCCGTCCGGACTACATTAAAGAGTTCTGGAACGTGGTGAACTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGGG‑GGTTTTTTTTTGTTAAATTTAa‑aaaaa > 2:1550068/1‑237 (MQ=255) tCCCGATTATGGGCCTGGATGTGTGGGAACATGCTTACTACCTGAAATTCCAGAACCGCCGTCCGGACTACATTAAAGAGTTCTGGAACGTGGTGAACTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGC‑GGT‑GGTTTTTTTGTGATCAATTTCA‑AAATaa < 2:984676/239‑1 (MQ=255) tGGATGTGTGGGAACATGCTTACTACCTGAAATTCCAGAACCGCCGTCCGGACTACATTAAAGAGTTCTGGAACGTGGTGAACTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGC‑GGT‑GGTTTTTTTGTGATCAATTTCA‑AAATAAAAACAATGATCCGat < 1:1022287/239‑1 (MQ=255) tGGATGTGTGGGAACATGCTTACTACCTGAAATTCCAGAACCGCCGTCCGGACTACATTAAAGAGTTCTGGAACGTGGTGAACTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGC‑GGT‑GGGGTTTTTTTGGTCAATTTTA‑aaaaaaaaaaaaaaat > 2:1022287/1‑230 (MQ=255) tGGATGTGTGGGAACATGCTTACTACCTGAAATTCCAAAACCGCCGTCCGGACTACATTAAAGAGTTCTGGAACGTGGTGAACTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGC‑GGT‑GGTTTTTTTGTGATCAATTTCA‑AAATAAAAACAATGATCCGat < 1:1740063/239‑1 (MQ=255) tGGATGTGTGGAAACATGCTTACTACCTGAAATTCCAGAACCGCCGTCCGGACTACATTAAAGAGTTCTGGAACGTGGTGAACTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGC‑GGT‑GGTTTTTTTGTGATCAATTTCA‑AAATAAAAACAATGATCCGat < 2:1957682/239‑1 (MQ=255) gtgGGAACATGCTTACTACCTGAAATTCCAGAACCGCCGTCCGGACTACATTAAAGAGTTCTGGAACGTGGTGAACTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGC‑GGG‑GGGTTTTTTTTGGTTAATTTTA‑AAATAAAAAAAATAATCACataaaaaat > 2:1740063/1‑237 (MQ=255) gtgGGAACATGCTTACTACCTGAAATTCCAGAACCGCCGTCCGGACTACATTAAAGAGTTCTGGAACGTGGTGAACTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGC‑GGG‑GGGGTTTTTTTGATCAATTTCA‑AAAAAAAAACAAAAATACCataaaaaaa > 2:1675418/1‑237 (MQ=255) aaCATGCTTACTACCTGAAATTCCAGAACCGCCGTCCGGACTACATTAAAGAGTTCTGGAACGTGGTGAACTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGC‑GGT‑GGTTTTTTTGTGATCAATTTCA‑AAATAAAAACAATGATCCGATAAAAATAAAAc < 1:950640/238‑1 (MQ=255) aaCATGCTTACTACCTGAAATTCCAGAACCGCCGTCCGGACTACATTAAAGAGTTCTGGAACGTGGTGAACTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGC‑GGA‑GGTATTTTTTTTAGTTATTTCATAAAAAAAAACAA‑AAACCGaacaaaataaaaaa > 2:950640/1‑237 (MQ=255) tGCTTACTACCTGAAATTCCAGAACCGCCGTCCGGACTACATTAAAGAGTTCTGGAACGTGGTGAACTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGGG‑GGTTTTTTTTGGGTTAATTTTA‑AAAAAAAAAAAAGAATCCAataaaaaaaaaaa > 2:1124608/1‑234 (MQ=255) tGCTTACTACCTGAAATTCCAGAACCGCCGTCCGGACTACATTAAAGAGTTCTGGAACGTGGTGAACTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGC‑GGT‑GGTTTTTTTGTGATCAATTTCA‑AAATAAAAACAATGATCCGATAAAAATAAAACAGCGt < 1:1524914/239‑1 (MQ=255) tGCTTACTACCTGAAATTCCAGAACCGCCGTCCGGACTACATTAAAGAGTTCTGGAACGTGGTGAACTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGC‑GGT‑GGTTTTTTTGTGATCAATTTCA‑AAATAAAAACAATGATCCGATAAAAATAAAACAGCGt < 1:1658849/239‑1 (MQ=255) tGCTTACTACCTGAAATTCCAGAACCGCCGTCCGGACTACATTAAAGAGTTCTGGAACGTGGTGAACTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGC‑GGG‑GGGTTTTTTTTGGTCAAATTTA‑AAATAAAAAAAATGATTCGctaaaaaaaaaaaa > 1:1152920/1‑233 (MQ=255) cTTACTACCTGAAATTCCAGAACCGCCGTCCGGACTACATTAAAGAGTTCTGGAACGTGGTGAACTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGC‑GGTGGGTTTTTTTTTTTTCATTTTC‑‑AAATAAAAAAAAAAATACCgtaaaaaaaaaaaaacggtt > 2:45911/1‑231 (MQ=255) cTTACTACCTGAAATTCCAGAACCGCCGTCCGGACTACATTAAAGAGTTCTGGAACGTGGTGAACTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGC‑GGTGGGTTTTTTTTGGTTCAATTTTA‑AAAAAAAAAAAAATACCCg‑taaaaataaaaaaaaggtt > 1:403487/1‑231 (MQ=255) ccTGAAATTCCAGAACCGCCGTCCGGACTACATTAAAGAGTTCTGGAACGTGGTGAACTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGC‑GGT‑GGGTTTTTTTTGGTCAATTTTA‑AAAAAAAAAAAAATAACCGATAAAAATAAAAAAACGGTTTCATTGa > 1:1229109/1‑239 (MQ=255) ccTGAAATTCCAGAACCGCCGTCCGGACTACATTAAAGAGTTCTGGAACGTGGTGAACTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGC‑GGG‑GGGTTTTTTTTGTTCTAATTTA‑AAAAAAAAAAAAAAATCCAGTAAAAAAAAAAAAGAGGTTCaactta > 2:1524914/1‑235 (MQ=255) cTGAAATTCCAGAACCGCCATCCGGACTACATTAAAGAGTTCTGGAACGTGGTGAACTGGGACGAAGCAGCGGCACGTTTTGCGGCGTAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGC‑GGT‑GGTTTTTTTGTGAACAATTTCA‑AAATAAAAACAAGGATCAGATAAAAATAAAACAGCGTTTCAATTGAt < 2:258092/239‑1 (MQ=255) tGAAATTCCAGAACCGCCGTCCGGACTACATTAAAGAGTTCTGGAACGTGGTGAACTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGC‑GGT‑GGTTTTTTTGTGATCAATTTCA‑AAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGAtg < 1:441500/239‑1 (MQ=255) gAACCGCCGTCCGGACTACATTAAAGAGTTCTGGAACGTGGTGAACTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGC‑GGT‑GGGTTTTTTTTGATCAAATTCA‑AAAAAAAAAAAAAAAACCGATAAAAAAAAAACAACGTTTTAATTTTTTTGGttttttt > 2:213540/1‑236 (MQ=255) aCCGCCGTCCGGACTACATTAAAGAGTTCTGGAACGTGGTGAACTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGC‑GGT‑GGTTTTTTTGTGATCAATTTCA‑AAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGAt < 1:1550068/237‑1 (MQ=255) aCCGCCGTCCGGACTACATTAAAGAGTTCTGGAACGTGGTGAACTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGC‑GGT‑GGTTTTTTTGTGATCAATTTCA‑AAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGAt < 1:1240754/237‑1 (MQ=255) aCCGCCGTCCGGACTACATTAAAGAGTTCTGGAACGTGGTGAACTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGC‑GGT‑GGTTTTTTTGTGATCAATTTCA‑AAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGAt < 1:1124608/237‑1 (MQ=255) cgccgTCCGGACTACATTAAAGAGTTCTGGAACGTGGTGAACTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGC‑GGT‑GGTTTTTTTGTGATCAATTTCA‑AAATaa < 2:892292/183‑1 (MQ=255) cgccgTCCGGACTACATTAAAGAGTTCTGGAACGTGGTGAACTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGC‑GGT‑GGGTTTTTTGTGATCAATTTCA‑AAATaa > 1:892292/1‑183 (MQ=255) ggTCCGGACTACATTAAAGAGTTCTGGAACGTGGTGAACTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGC‑GGT‑GGTTTTTTTGTGATCAATTTCA‑AAATAAAAACAATGTTCCGATAAAAATAAAACAGCGTTGCAATTTATGTGGTTTTGATCAc < 2:1684571/234‑1 (MQ=255) gTCCGGACTTCATTAAAGAGTTCTGGAACGTGGTGAACTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGC‑GGT‑GGTTTTTTTGTGATCAATTTCA‑AAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGATCACTTTTa < 1:93481/239‑1 (MQ=255) gTCCGGACTACATTAAAGAGTTCTGGAACGTGGTGAACTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGC‑GGT‑GGTTTTTTTGTGATCAATTTCA‑AAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGAtg < 1:1800178/221‑1 (MQ=255) gTCCGGACTACATTAAAGAGTTCTGGAACGTGGTGAACTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGC‑GGT‑GGTTTTTTTGTGATCAATTTCA‑AAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGATCACTTTTa < 1:1675418/239‑1 (MQ=255) cTACATTAAAGAGTTCTGGAACGTGGTGAACTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGC‑GGT‑GGTTTTTTTGTGATCAATTTCA‑AAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGATCACTTTTATTGAtt < 1:1393140/238‑1 (MQ=255) cATTAAAGAGTTCTGGAACGTGGTGAACTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGC‑GGT‑GGTTTTTTTGTGATCAATTTCA‑AAATaaa < 1:230698/170‑1 (MQ=255) cATTAAAGAGTTCTGGAACGTGGTGAACTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGC‑GGT‑GGTTTTTTTGTGATCAATTTCA‑AAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGATCACTTTTa < 1:1189176/229‑1 (MQ=255) ttAAAGAGTTCTGGAACGTGGTGAACTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGC‑GGT‑GGTTTTTTTGTGATCAATTTCA‑AAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGATCACTTTTATTGATTAaatga < 1:213540/239‑1 (MQ=255) aaaGAGTTCTGGAACGTGGTGAACTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGC‑GGT‑GGTTTTTTTGTGATCAATTTCA‑AAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGATCACTTTTATTGATTAaatgaat < 2:514634/239‑1 (MQ=255) agTTCTGGAACGTGGTGAACTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGC‑GGT‑GGGTTTTTTTTGGTTAATTTTT‑AAATAAAAAAAAAGATCCGATAAAAAAAAAAAAACGGTTTAATTGATTTGGGTTTTGTTACTTTTTTTATTTaaaataaatttc > 2:1717520/1‑230 (MQ=255) ttCTGGAACGTGGTGAACTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGC‑GGT‑GGTTTTTTTGTGATCAATTTCA‑AAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGATCACTTTTATTGATTAaatga < 1:925443/231‑1 (MQ=255) ttCTGGAACGTGGTGAACTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGC‑GGT‑GGGTTTTTTTTGTTTAATTTTT‑AAAAAAAAAAAAATATCCGATAAAAAAAAAAAAACGTTTTAATTTATTTGGGTTTTATTCCTTTTTTTTATTAAAAGAATGtataa > 2:2188426/1‑238 (MQ=255) ttCTGGAACGTGGTGAACTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGC‑GGG‑GGTTTTTTTTTTGTCAATTTTA‑AAATAAAAAAAAAAATCCGATAAAAATAAAAAAACGTTTTAATTGATGTGGGTTTTATTACTTTTATTTATTAAATAAATGTTTAt > 2:342089/1‑239 (MQ=255) ttCTGGAACGTGGTGAACTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGC‑GGG‑GGGTTTTTTGTGTTCAATTTTA‑AAATaaaaaaaaaaatc > 2:230698/1‑165 (MQ=255) ttCTGGAACGTGGTGAACTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGC‑GGC‑GGGTTTTTTTTGTTTAATTTTT‑AAATAAAAAAAAAAATCCGATAAAAAAAAAAAAACGCTTTTATTTATTTGGGTTTTTTTACTtttttttttttaat > 2:1189176/1‑221 (MQ=255) aCGTGGTGAACTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGC‑GGT‑GGTTTTTTTGTGATCAATTTCA‑AAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGATCACTTTTATTGATTAAATGAATGTCTATC‑TTCGtt < 1:2188426/239‑1 (MQ=255) tggtgAACTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGC‑GGT‑GGGTTTTTTTTGTTTCATTTTA‑AAAAAAAAACAAAGATCCGATAAAAATAAAAAAACGTTTTAATTGATTTGGTGTTTTTTACTTTTTTTTATTTAATTAATGTTTATC‑t > 2:925443/1‑231 (MQ=255) ggtgAACTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGC‑GGT‑GGTTTTTTTGTGATCAATTTCA‑AAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGATCACTTTTATTGATTAAATGAATGTCTATC‑TTCGTTTcc < 2:259614/238‑1 (MQ=255) aCTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGC‑GGT‑GGTTTTTTTGTGATCAATTTCA‑AAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGATCACTTTTATTGATTAAATGAATGTCTATC‑TTCGTTTCCATCaa < 2:1048991/238‑1 (MQ=255) ggACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGC‑GGT‑GGGTTTTTTTTGATTAATTTTA‑AAATAAAAAAAAAAAACCGATTAAAAAAAAACAAAGTTTTCATTTTTGTGGTTTTTTTTACTTTTATTTATTAAATTAAAGTATTTT‑CTCGTTTTCATAAacaata > 2:534642/1‑236 (MQ=255) gACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGC‑GGT‑GGTTTTTTTGTGATCAATTTCA‑AAATAAAAACAATGATCCGat < 1:1861602/153‑1 (MQ=255) cGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGC‑GGT‑GGGTTTTTTTTGGTCAATTTTA‑AAAAAAAAAAAAAGATCCGataaaaaaaaaa > 2:1861602/1‑153 (MQ=255) cGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGC‑GGG‑GGGTTTTTTTTGATCAATTTTA‑AAAAAAAAAAAAAGAACCGAAAAAAATAAAAAAACGGTTTACTTTATGTGGGTTTTATCTCCTTTATTTTTTTAAAGAAATTCTATT‑CTTTTTTTCATTAACACTTATGCttccttt > 2:947217/1‑233 (MQ=255) ggCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGC‑GGT‑GGTTTTTTTGTGATCAATTTCA‑AAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGATCACTTTTATTGATTAAATGAATGTCTATC‑TTCGTTTCCATCAACACTGATGCt < 1:947217/232‑1 (MQ=255) tttGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGC‑GGT‑GGGTTTTTTTTGGTTCATTTTT‑AAATAAAAAAAAAAATCCGAAAAAAAAAAAAAAACGGTTCAATTGTTGTGGTTTTGATCACCTTTTTTTATTTAATGAATTTCTATC‑CTCGTTTCCCTTAACACTGGTGCTCCCTTGAGGaagtt > 2:275174/1‑236 (MQ=255) cggcgAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGC‑GGT‑GGTTTTTTTGTGATCAATTTCA‑AAATaaa < 2:186323/117‑1 (MQ=255) cggcgAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGC‑GGT‑GGTTTTTTTGTGATCAATTTCA‑AAATaaa > 1:186323/1‑117 (MQ=255) ggcgAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGC‑GGT‑GGTTTTTTTGTGATCAATTTCA‑AAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGATCACTTTTATTGATTAAATGAATGTCTATC‑TTCGTTTCCATCAACACTGATGCTCCATTGAGGAATTACGCAt < 1:1199720/239‑1 (MQ=255) gAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGC‑GGT‑GGTTTTTTTGTGATCAATTTCA‑AAATAAAAACAATGATCCGat < 1:1366554/127‑1 (MQ=255) gAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGC‑GGT‑GGTTTTTTTGTGATCAATTTCA‑AAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGATCACTTTTATTGATTaaa < 1:751432/181‑1 (MQ=255) gAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGC‑GGT‑GGTTTTTTTGTGATCAATTTCA‑AAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGATCACTTTTATTGATTAAATGAATGTCTATC‑TTCGTTTCCATCAACACTGATGCTCCATTGAGGAATTACGCATCa < 1:1717520/238‑1 (MQ=255) gAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGC‑GGT‑GGTTTTTTTGTGATCAATTTCA‑AAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGATCACTTTTATTGATTAAATGAATGTCTATC‑TTCGTTTCCATCAACACTGATGCTCCATTGAGGAATTACGCATCAg < 1:342089/239‑1 (MQ=255) tCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGC‑GGT‑GGGTTTTTTTTGGTCAATTTCA‑AAATTAAAAAAAAGATCCGataaaaataaaa > 2:1366554/1‑127 (MQ=255) tCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGC‑GGT‑GGGTTTTTTTTGATCAATTTTA‑AAAAAAAAAAAAAGATCCGATAAAAATAAAAAAACGTTTTAATTTATTTGGGTTTTTTTACTTTTATTTATTAAAAGAATGTCTa > 2:751432/1‑181 (MQ=255) cATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGC‑GGT‑GGTTTTTTTGTGATCAATTTCA‑AAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGATCACTTTTATTGATTAAATGAATGTCTATC‑TTCGTTTCCATCAACACTGATGCTCCATTGAGGAATTACGCATCAGCCCTTAAAAat < 1:45911/239‑1 (MQ=255) ccTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGC‑GGT‑GGTTTTTTTGTGATCAATTTCA‑AAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGATCACTTTTATTGAt < 1:1837698/157‑1 (MQ=255) ccTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGC‑GGG‑GGGTTTTTTTTGATCAATTTTT‑AAAAAAAAACAAAGGTCCCCTAAAAATAAAAAAAAGGTTTAATTGTTGTGGGTTTTATTACTTTTTTTTATTAAATGAATGTATATCTTTGGTTTCCTCCAAC‑CTGATTCTCCAATGAGGGAATACTCATCAACCCCTTAAAatattaccgaa > 2:1492255/1‑232 (MQ=255) ctgcAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGC‑GGG‑GGGTTTTTTTTTATTAAATTAT‑AAATAAAAAAAACTATACAATAAAAAAAAAACACCGTTTTAATTGATGTGGGTTTTATACCTTTTTTTTATTAAATGAATGTCTATC‑TTCGTTTTCATCAACACTGATGCTCCACTGAGGGATTACTCATCTGCCCTTTAAAAAATTCAGACAggag > 2:136824/1‑237 (MQ=255) tGATGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGC‑GGT‑TGTTTTTTTTTGTGTAATTTTA‑AAAAAAAAAAAAAAATTCCTTTAAAAAAATACAACGTTTTTATTTTTTAGGTCTTTATCACTTTTATTTATTAaattaatg > 2:1837698/1‑157 (MQ=255) ggCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGC‑GGT‑GGTTTTTTTGTGATCAATTTCA‑AAATAAAAACAATGATCCGat < 1:2245121/94‑1 (MQ=255) gCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGC‑GGT‑GGTTTTTTTGTGATCAATTTCa‑aa < 1:1021814/74‑1 (MQ=255) gCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGC‑GGT‑GGTTTTTTTGTGATCAATTTCA‑AAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGATCACTTTTATTGATTAAATGAATGTCTATC‑TTCGTTTCCATCAACACTGATGCTCCATTGAGGAATTACGCATCAg < 1:323106/205‑1 (MQ=255) tataGGCCCCATATCAGCTTAAAAAAGGACCCACCGCAAACGGC‑GTT‑GG‑TTTTTTGTGATCAATTTCA‑AAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGATCACTTTTATTGATTAAATGAATGTCTATC‑TTCGTTTCCAt < 1:1743811/166‑1 (MQ=255) ccGCATATCAGCTTAAAAAATGAACCATCGCCAACGGC‑GGT‑GGGTTTTTTTTGGTCAAATTTA‑AAATAAAAAAAAAGATCCGataaaaataaaa > 2:2245121/1‑94 (MQ=255) cGCATATCAGCTTAAAAAATGAACCATCGCCAACGGC‑GGT‑GGTTTTTTTGTGATCAATTTCA‑AAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGATCACTTTTATTGATTAAATGAATGTCTATC‑TTCGTTTCCATCAACACTGATGCTCCATTGAGGAATTACGCATCAGCCCTTAAAAATATGCCGACAGGTGATGGAAATGCAGATAAAACg < 1:1266902/239‑1 (MQ=255) cGCATATCAGCTTAAAAAATGAACCATCGCCAACGGC‑GGG‑GGGTTTTTTTTGTTCAATTTTA‑AAAAAAAAACaa > 2:1021814/1‑74 (MQ=255) aaaTGAACCATCGCCAACGGC‑GGT‑GGTTTTTTTGTGATCAATTTCA‑AAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGATCACTTTTATTGATTAAATGAATGTCTATC‑TTCGTTTCCATCAACACTGATGCTCCATTGAGGAATTACGCATCAGCCCt < 1:2116107/183‑1 (MQ=255) gCCAACGGC‑GGT‑GGTTTTTTTGTGATCAATTTCA‑AAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGATCACTTTTATTGATTAAATGAATGTCTATC‑TTCGTTTCCATCaa < 1:1579790/135‑1 (MQ=255) tttGTGATCAATTTCA‑AAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGATCACTTTTATTGATTAAATGAATGTCTATc > 1:816099/1‑103 (MQ=255) tttGTGATCAATTTCA‑AAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGATCACTTTTATTGATTAAATGAATGTCTATc < 2:816099/103‑1 (MQ=255) | GCGCTTCCGGCTTCCCGATTATGGGCCTGGATGTGTGGGAACATGCTTACTACCTGAAATTCCAGAACCGCCGTCCGGACTACATTAAAGAGTTCTGGAACGTGGTGAACTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGC‑GGT‑GGTTTTTTTGTGATCAATTTCA‑AAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGATCACTTTTATTGATTAAATGAATGTCTATC‑TTCGTTTCCATCAACACTGATGCTCCATTGAGGAATTACGCATCAGCCCTTAAAAATATGCCGACAGGTGATGGAAATGCAGATAAAACG > NC_000913/4101282‑4101703 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 7 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |