| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,862,638 | 0 | T | C | 44.0% | 115.3 / 14.9 | 75 | pseudogene (966/1617 nt) | glvC | pseudogene, arbutin specific enzyme IIC component of PTS;enzyme; Transport of small molecules: Carbohydrates, organic acids, alcohols; PTS system, arbutin‑like IIB component; PTS system, arbutin‑like IIC component |
| Reads supporting (aligned to +/- strand): ref base T (32/10); new base C (0/33); total (32/43) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.25e-12 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
CGGTAAAACCTAGTCAATCAGACCTCCGCCCATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATTCCCACCAGCATGGC‑GGTTAAGGTTGCGGG‑AATCAGCAA‑GCCCGCCACTTTTACCCGATTTTCCGGTGCGGCAGTGAAGTACATCGCTAAAGAAATGCCCACGGCACCAAAGATTTTTGAGTTACCGTGCAGGGCAAAACCGCCTTCCG > NC_000913/3862488‑3862786 | cGGTAAAACCTAGTCAATCAGACCTCCGCCCATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAAtt < 1:536697/151‑1 (MQ=255) gTAAAACCTAGTCAATCAGACCTCCGCCCATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATTcc > 1:63958/1‑151 (MQ=255) aaaCCTAGTCAATCAGACCTCCGCCCATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATTCccac > 2:890165/1‑151 (MQ=255) aCCTAGTCAATCAGACCTCCGCCCATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATTCccacc > 1:1238029/1‑150 (MQ=255) cTAGTCAATCAGACCTCCGCCCATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATTCCCACCAGc > 2:735537/1‑151 (MQ=255) aGTCAATCAGACCTCCGCCCATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATTCCCACCAGCAt < 1:1169760/151‑1 (MQ=255) aGTCAATCAGACCTCCGCCCATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATTCCCACCAGCAt < 2:1087141/151‑1 (MQ=255) gTCAATCAGACCTCCGCCCATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATTCCCACCAGCATg < 2:1286628/151‑1 (MQ=255) aaTCAGACCTCCGCCCATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATTCCCACCAGCATGGC‑g > 1:923133/1‑151 (MQ=255) aGACCTCCGCCCATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATTCCCACCAGCATGGC‑ggat > 2:1156843/1‑148 (MQ=255) aGACCTCCGCCCATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATTCCCACCAGCATGGC‑GGttt > 1:1256928/1‑150 (MQ=255) tCCGCCCATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATTCCCACCAGCATGGCGGGTTAAgtt > 2:538194/1‑149 (MQ=255) gCCCATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATTCCCACCAGCATGGC‑GGTTAAGGTTGCg < 2:780113/151‑1 (MQ=255) cccATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATTCCCACCAGCATGGC‑GGTTAAGGTTGCgg < 1:591475/151‑1 (MQ=255) tGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATTCCCACCAGCATGGC‑GGTTTAGGGTGCGGG‑GAt > 1:1274813/1‑151 (MQ=255) caccacaccaAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATTCCCACCAGCATGGC‑GGTTAAGGTTGCGGG‑AATCAGCAA‑g < 1:1270710/151‑1 (MQ=255) caccacaccaAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATTCCCACCAGCATGGC‑GGTTAAGGTTGCGGG‑AATCAGCAA‑g < 1:1007127/151‑1 (MQ=255) acaccaAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATTCCCACCAGCATGGC‑GGTTAAGGTTGCGGG‑AATCAGCAA‑GCCCg < 2:1077240/151‑1 (MQ=255) caAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATTCCCACCAGCATGGC‑GGGTAAGGGTGGGGG‑GAATAGCaaagccccccc > 2:905176/1‑142 (MQ=255) agagATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATTCCCACCAGCATGGC‑GGGTTAGGGTGCGGG‑GATCAGCAA‑ACCCCCCCCttt > 1:283547/1‑151 (MQ=255) agaTACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATTCCCACCAGCATGGC‑GGTTAAGGGTGGGGG‑GATCAGCAA‑ACCCCCCCCttttt > 1:862204/1‑150 (MQ=255) aCATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATTCCCACCAGCATGGC‑GGTTTAAGGTGCGGG‑GATCAGCAA‑AACCCCCACTTTTAcccc > 1:854569/1‑150 (MQ=255) ggTCGATATGGAGGCCCCCAGCGGGGCGTGTCCCGCAAACAGCAACGGTGAAATAAACAGGAAGGTAAATCCCAGCGGTTCGGTAATCCCCCCCAGCTTGGC‑GGTTAGGGTTGGGGA‑AATCAGAAA‑GCCCGCCACTTTTACCCGATTTTcc < 2:1196055/151‑1 (MQ=255) ggTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGAGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATTCCCACCAGCATGGC‑GGATAAGGGTGCGGG‑GAAAAGGAA‑GCCCCGCCCTTTTaaaccacttttc > 1:919598/1‑140 (MQ=255) gTCGACATGGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAAGGGTAAAATGAACAGGAAGATAAATTCCAGCGGTTCGGTAATCCCCACCAGCAGGGC‑GTTTAAGGTTGGGGA‑AATCAGCAA‑GCCCGCCACTTTTACCCGATTTTCCg < 1:408879/151‑1 (MQ=255) cGACATTGAGGCCGCCAGCGCGGCGTGTACCGCAAACAGCAAGGGTAAAATAAACAGGAAGGTAATTCCCAGCGGTTCGGTAATCCCCCCCAGCATGGC‑GGTTAAGGTGGCGGG‑AATCAGCAA‑GCCCGCCACTTTTACCCGATTTTCCGGt < 1:1204094/151‑1 (MQ=255) aCATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATTCCCACCAGCATGGCGGGTTAAGGTTGGGGG‑AACAACAAA‑CCCCGCACCTTTTTCCCGATTTTCCgggg > 1:325054/1‑149 (MQ=255) aCATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATTCCCACCAGCATGGC‑GGTTAAAGTTGCGGG‑GATTAGCAA‑ACCCCCCCCCTTTACCCGAtttttccgggc > 2:993973/1‑144 (MQ=255) tggAGGCCGCCAGCCCGGCGTGTCCCGAAAACAGAAAGGGAAAAATGAACAGGAAGGAAAATCCCGGCGTTTCGTTATTCCCCCCCACCATGGC‑‑GTTTAGGTTGGGGGAAATCAGCAA‑GCCCGCCACTTTTACCCGATTTTCCGGTGCg < 2:1131573/147‑1 (MQ=255) tGAGGCCGCCAGCCCGGCGTGTACCGAAAACAGCAACGGTAAAATGAACAGGAAGGTAAATCCCAGCGGTTCGGTAATCCCCACCAGCAGGGC‑GTTTAAGGTGGGGGG‑AATCAGCAA‑GCCCGCCACTTTTACCCGATTTTCCGGTGCGGc < 1:753798/150‑1 (MQ=255) aGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATTCCCACCAGCATGGCGGGTAAAGGTTGGGGG‑AA‑CAGCAA‑ACCCCCCACCTTTTCCCCATTTTTCTGGGCGGGAgg > 2:690807/1‑150 (MQ=255) ccgccAGCAGGGCGTGTCCCGCAAACAGCAAGGGTGAAAGGAACAGGAAGGTAAATCCCAGCGGTTCGGTAATCCCCACCAGCAGGGC‑GGTTAAGGTTGCGGG‑AATCAGCAA‑GCCCGCCACTTTTACCCGATTTTCCGGTGCGGCAGTGaa < 1:805470/151‑1 (MQ=255) cgccAGCACGGCGTGTACCGAAAACAGCAACGGTAAAATGAACAGGAAGGTAAATCCCAGCGGTTCGGTAATCCCCACCAGCAGGGC‑GGTTAAGGTGGGGGA‑AATCAGAAA‑GCCCGCCACTTTTACCCGATTTTCCGGTGCGGCAGTGAAg < 1:627436/151‑1 (MQ=255) cccAGCACGGGGTGCACCGAAAACAGCAACGGTAAAATAAACAGGAAGGAAAATCCCGGGGTTTCGGTAATCCCCCCCAGCATGGC‑GGTTAAGGTGGGGGG‑AACCAGAAG‑GCCCGCCACTTTTACCCGATTTTCCGGTGCGGCAGTGAAGt < 2:282843/150‑1 (MQ=255) ccAGCAGGGCGTGTCCCGCAAACAAAAACGGTAAAATGAACGGGAAGTAAAATTCCGGGGGTTCGGTAATCCCCACAAGCATGGC‑GGTTAGGGTTGGGGG‑AATCAGAAA‑GCCCGCCACTTTTACCCGATTTTCCGGTGCGGCAGTGAAGTa < 2:644250/151‑1 (MQ=255) aGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATTCCCACCAGCATGGC‑GGTTAAAGGTTCGGG‑GAACAGCAA‑GCCCCCCCCTTTTTCCCGCTTTTTCGGGGCgggcgggaaggac > 2:1339581/1‑139 (MQ=255) ccACGGCGTGTCCCGAAAACAGCAACGGTAAAATAAACAGAAAGATAAATCCCAGCGTTTCGTTAATCCCCACCAGCATGGC‑GTTTAAGGTGGCGGA‑AATCAGCAA‑GCCCGCCACTTTTACCCGATTTTCCGGTGCGGCAGTGAAGTACAt < 1:512051/150‑1 (MQ=255) ccgggggtcacccGCAAACAGCACCGGTGAAATAAAAAGGAAGTTAAATCCAGGCGGTTCGTTAATCCCCACCAGCGTGGC‑GGTTAGGGTGGGGGG‑AATGAGAAG‑GCCCGCCACTTTTACCCGATTTTCCGGTGCGGCAGTGAAGTACATc < 2:60556/140‑1 (MQ=255) cACGGCGTCCCCCGCAAACAGCAGGGTAGAAATGAACAGGAAGTTAATTTCCAGCGTTTCGGTAATCCCCCCCAGCATGGC‑GTTTAGGGTGGGGGA‑AATCAGAAG‑GCCCGCCACTTTTACCCGATTTTCCGGTGCGGCAGTGAAGTACATc < 2:16672/151‑1 (MQ=255) ggCGTGTCCCGCAAACAGCAACGGTAAAATGAACAGGAAGGAAAATCCCAGCGGTTCGGTAATCCCCCCCAGCAGGGC‑GGTTAAGGTTGCGGG‑AATCAGCAA‑GCCCGCCACTTTTACCCGATTTTCCGGTGCGGCAGTGAAGTACATCGCt < 1:15940/151‑1 (MQ=255) ggCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATTCCCACCAGCATGGC‑GGTTAAGGTTGCGGG‑GATCAGCAA‑GCCCGCCACCTTTTCCCGATTTTCCGGGGCCGCAGTGGAGTACATCGCt > 1:95756/1‑151 (MQ=255) gcttgtCCCGAAAACAGCAGGGGTAAAATAAACGGGAAGGTAATTTCCGGCGTTTCGGAAATCCCCCCCAGCAGGGC‑GTTTAGGTTGGCGGG‑AATCAGAAA‑CCCCGCCACTTTTACCCGATTTTCCGGTGCGGCAGTGAAGTACATCGCTa < 2:498750/148‑1 (MQ=255) gtgtACCGAAAACAGCAAGGGTAAAATGAACAGGAAGGAAAATCCCGGGGGTTGGGAAATCCCCACCAGCAGGGG‑GGTTAGGGTGGGGGA‑AATCAGCAA‑GCCCGCCACTTTTACCCGATTTTCCGGTGCGGCAGTGAAGTACATCGCTaaa < 1:614442/151‑1 (MQ=255) gtACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATTCCCACCAGCATGGC‑GGTTAAGGGTGCGGG‑AATCAGCAA‑GCCCGCCACTTTTACCCGATTTTCCGGTGCGGCAGTGAAGTACATCGCTaa > 1:1150658/1‑148 (MQ=255) gtACCGCAAACAGCAACGGTAAAATGAACAGGAAGGTAAATCCCAGCGGTTCGGTAATTCCCACCAGCATGGC‑GGTTAAGGTTGCGGG‑AATCAGCAA‑GCCCGCCACTTTTACCCGATTTTCCGGTGCGGCAGTGAAGTACATCGCTAAAg < 1:1302270/150‑1 (MQ=255) tACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATTCCCACCAGCATGGC‑GGTTAAGGGTGCGGG‑AATCAGCAA‑GCCCGCCACTTTTACCCGATTTTCCGGGGCGGCAGTGAAGTACATCGCTAAAGa > 2:682324/1‑150 (MQ=255) acccGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATCCCGGCGGTTCGGTAATCCCCCCCAGCATGGC‑GGTTAAGGTGGGGGA‑AATAAGCAA‑GCCCGCCACTTTTACCCGATTTTCCGGTGCGGCAGTGAAGTACATCGCTAAAGaa < 1:365014/149‑1 (MQ=255) aaaCAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATTCCCACCAGCATGGC‑GGTTAAAGTTTCGGG‑GATCAGCAA‑GCCCCCCCCTTTTTCCCCGTTTTTCGGGGCGGCCGGGAAGTACATCGCTAAAAAAAAGccc > 2:1213269/1‑151 (MQ=255) aaaCAGCAACGGAAAAATGAACAGGAAGGAAAATCCCAGCGGTTCGGAAATCCCCCCCAGCAGGGC‑GGTTAGGGTTGCGGG‑AATCAGCAA‑GCCCGCCACTTTTACCCGATTTTCCGGTGCGGCAGTGAAGTACATCGCTAAAGAAATGccc < 2:95573/151‑1 (MQ=255) aCAGCAACGGTAAAATGAACAGGAAGGTAAATCCCAGCGGTTCGGTAATCCCCCCCAGCAGGGC‑GTTTAAGGTTGCGGG‑AATCAGCAA‑GCCCGCCACTTTTACCCGATTTTCCGGTGCGGCAGTGAAGTACATCGCTAAAGAAATGCCCAc < 1:267746/151‑1 (MQ=255) gCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATTCCCACCAGCATGGC‑GGTTAAAGTTGCGGG‑AATCAGCAA‑GGCCCCCACCTTTACCCGATTTTTCGGTGCGGGAGTGAAGGACATCGCCAAAGAAAATCCCCCGGc > 2:840727/1‑151 (MQ=255) aaCGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATTCCCACCAGCATGGC‑GGTTAAAGTTGCGGG‑GATCAGCAA‑GCCCGCCACTTTTACCCGATTTTCCGGTGCGGCAGGGAAGTACATCGCTAAAGAAATGCCCACGGCAc > 2:1008201/1‑151 (MQ=255) aCGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATTCCCACCAGCATGGC‑GGTTAAAGGTGCGGG‑GATCAGCAA‑GCCCGCCACTTTTACCCGATTTTTCCGGGCGGGAGTGAAGTACATCGCCAAAGAAATGCCTACGGGAcc > 2:152042/1‑151 (MQ=255) cGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATTCCCACCAGCATGGC‑GGTTAAAGGTGCGGG‑GATCAGCAA‑GCCCGCCACCTTTAACCGGTTTTTCGGGGCGGCAGTGAAGTACATCGCCAAAAAAAAGCCCCCGGCAccc > 2:385434/1‑150 (MQ=255) ggtaaaagaaaCAGAAAGGAAAATCCCAGCGGTTCGGTAATCCCCCCCAGCAGGGG‑GTTAAAGGTTGGGGG‑AACAAGCAA‑GCCCGCCACTTTTACCCGATTTTCCGGTGCGGCAGTGAAGTACATCGCTAAAGAAATGCCCACGGCACCaa < 1:594197/142‑1 (MQ=255) gtaaaaTGAACAGGAGGGTAAATTCCAGCGGTTCGGTAATCCCCACCAGCATGGC‑GGTTAAGGTTGCGGG‑AATCAGAAA‑GCCCGCCACTTTTACCCGATTTTCCGGTGCGGCAGTGAAGTACATCGCTAAAGAAATGCCCACGGCACCaaa < 1:587429/148‑1 (MQ=255) gtaaaaTGAACAGGAAGGAAAATCCCAGCGGTTCGGTAATCCCCCCCAGCAGGGC‑GGTTAAGGTTGCGGG‑AACCAGCAA‑GCCCGCCACTTTTACCCGATTTTCCGGTGCGGCAGTGAAGTACATCGCTAAAGAAATGCCCACGGCACCaaa < 1:1314089/148‑1 (MQ=255) gTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATTCCCACCAGCATGGC‑GGTTAAGGTTGCGGG‑AATCAGCAA‑GCCCGCCACTTTTACCCGATTTTTCGGTGCGGCAGTGAAGTACATCGCTAAAAAAATGCCCACCGCACCaa > 1:696656/1‑150 (MQ=255) aaaaagaaaCAGGAAGTTATTCTCCGGCGGTTCGAAATTCCCCCCCAGCGGGGC‑GGTTAAGGTTGCGGA‑AATAAGAAG‑GCCCGCCACTTTTACCCGATTTTCCGGTGCGGCAGTGAAGTACATCGCTAAAGAAATGCCCACGGCACCAAAg < 2:591288/144‑1 (MQ=255) aggAACGGAAAGGTAAATCCCAGGGTTTGGGAAATCCCCCCCAGCTGGGC‑GTTTAGGGTGGGGGA‑AATCAGCAA‑GCCCGCCACTTTTACCCGATTTTCCGGTGCGGCAGTGAAGTACATCGCTAAAGAAATGCCCACGGCACCAAAGAttt < 2:290088/149‑1 (MQ=255) aaaaaaGGAAGGTAAATCCCAGCGGTTGGGTAATCCCCCCCAGAAGGGC‑GGTTAAGGTTGGGGA‑AACCAGCAA‑GCCCGCCACTTTTACCCGATTTTCCGGTGCGGCAGTGAAGTACATCGCTAAAGAAATGCCCACGGCACCAAAGAtttt < 1:291197/146‑1 (MQ=255) gAACAGGAAGGTAAATTCCAGCGGTTCGGTAATTCCCACCAGCATGGC‑GGTTAAGGGTGCGGG‑AATCAGCAA‑GCCCGCCACTTTTACCCGATTTTCCGGTGCGGCAGGGAAGTACATCGCTAAAAAAATGCCCACGGCACCAAAGAttttt > 1:812924/1‑151 (MQ=255) aaaCAGGAAGGAAAATTCCGGGGTTTCGATAATTCCCCCCAGCATGGC‑GGTAAGGGTGGCGGA‑AAACAGAAA‑GCCCGCCACTTTTACCCGATTTTCCGGTGCGGCAGTGAAGTACATCGCTAAAGAAATGCCCACGGCACCAAAGAttttt < 2:516422/150‑1 (MQ=255) aaGGAAGTAAAATCCCAGGGGTTCGGTAATCCCCCCCAGCATGGC‑GGTTAAGGTGGCGGG‑AATCAGCAA‑GCCCGCCACTTTTACCCGATTTTCCGGTGCGGCAGTGAAGTACATCGCTAAAGAAATGCCCACGGCACCAAAGATTTTTGAg < 1:479922/150‑1 (MQ=255) gAAGGTAAATTCCAGCGGTTCGGTAATTCCCACCAGCATGGC‑GGTTAAGGTTGCGGG‑GATCAGCCA‑GCCCCCCACTTTTTCCCGATTTTCCGGGGGGGCAGTGGAGTACAACGCTAAAAAAAAGCCCACCGCACCCAAAATTTTTTAGtt > 2:885376/1‑150 (MQ=255) ggTAAATTCCAGCGGTTCGGTAATTCCCACCAGCATGGC‑GGTTAAGGTTTCGGG‑GATCAGCAA‑GCCCGCCACTTTTTCCCGATTTTCCGGTGCGGCAGTGAAGTACATCGCTAAAGAAATTCCCACGGCACCCAAGAATTTTTAGTTAccc > 1:363959/1‑150 (MQ=255) aaaTCCCAGCGTTTCGTTAATCCCCCCCGGCAGGGC‑GGTTAGGGTGGCGGA‑AACCAGCAA‑GCCCGCCACTTTTACCCGATTTTCCGGTGCGGCAGTGAAGTACATCGCTAAAGAAATGCCCACGGCACCAAAGATTTTTGAGTTACCGTGc < 2:1354125/151‑1 (MQ=255) aatcccggggtttCGATAATCCCCACCAGCAGGGG‑GTTTAGGGTGGGGGA‑AACCAGCAA‑CCCCGCCACTTTTACCCGATTTTCCGGTGCGGCAGTGAAGTACATCGCTAAAGAAATGCCCACGGCACCAAAGATTTTTGAGTTACCGTGCa < 2:1237757/140‑1 (MQ=255) tCCAGCGGTTCGGTAATCCCCCCCAGCAGGGG‑GGTTAAGGTTGCGGG‑AACCAGCAA‑GCCCGCCACTTTTACCCGATTTTCCGGTGCGGCAGTGAAGTACATCGCTAAAGAAATGCCCACGGCACCAAAGATTTTTGAGTTACCGTGCAgg < 1:858292/150‑1 (MQ=255) cccAGCGGTTCGGTAATCCCCCCCAGCGTGGC‑GGTTAGGGTTGCGGA‑AATCAGCAA‑GCCCGCCACTTTTACCCGATTTTCCGGTGCGGCAGTGAAGTACATCGCTAAAGAAATGCCCACGGCACCAAAGATTTTTGAGTTACCGTGCAggg < 1:1049080/150‑1 (MQ=255) cgggggTTCGTTAATCCCCCCCAGCATGGC‑‑GTTTAGGTTGGGGGAAATAAGCAA‑GCCCGCCACTTTTACCCGATTTTCCGGTGCGGCAGTGAAGTACATCGCTAAAGAAATGCCCACGGCACCAAAGATTTTTGAGTTACCGTGCAGGGCa < 1:406442/147‑1 (MQ=255) cAGCGTTTCGTTAATCCCCACCGGCAGGGC‑GGTAAAGGTTGCGGA‑AATCAGAAA‑GCCCGCCACTTTTACCCGATTTTCCGGTGCGGCAGTGAAGTACATCGCTAAAGAAATGCCCACGGCACCAAGGATTTTTGAGTTACCGTGCAGGGCa < 1:1081496/151‑1 (MQ=255) ggTTGGGTAATCCCCCCCAGCAGGGC‑GTTTAGGGTTGGGGA‑AATCAGCAA‑CCCCGCCACTTTTACCCGATTTTCCGGTGCGGCAGTGAAGTACATCGCTAAAGAAATGCCCACGGCACCAAAGATTTTTGAGTTACCGTGCAGGGCAAAAc < 2:821916/151‑1 (MQ=255) cGGTAATCCCCCCCAGCGTGGC‑GGTTAAGGTGGGGGG‑AATCAGCAA‑GCCCGCCACTTTTACCCGATTTTCCGGTGCGGCAGTGAAGTACATCGCTAAAGAAATGCCCACGGCACCAAAGATTTTTGAGTTACCGTGCAGGGCAAAACCGc < 1:91324/150‑1 (MQ=255) gggtactCCCCCCAGGGTGGG‑GGTTAAGGTTGGTGA‑AAACCACAACCCCCGCCACTTTTACCCGATTTTCCGGTGCGGCAGTGAAGTACATCGCTAAAGAAATGCCCACGGCACCAAAGATTTTTGAGTTACCGTGCAGGGCAAAACCGc < 2:95753/144‑1 (MQ=255) tAATTCCCACCAGCATGGC‑GGTTAAGGTTGCGGG‑AATCAGCAA‑GCCCGCCCCTTTTACCCGATTTTCCGGTGCGGCAGTGAAGTACATCGCTAAAGAAATGCCCACGGCACCAAAGATTTTTGAGTTACCGTGCAGGGCAAAACCGCCCTc > 1:1179797/1‑151 (MQ=255) aTTCCCACCAGCATGGC‑GGTTAAGGTTGCGGG‑AATCAGCAA‑GCCCGCCACTTTTACCCGATTTTTCGGTGCGGCAGTGAAGGACATCGCTAAAAAAAAGCCCACGGCACCAAAAATTTTTGAGTTACCGTGCAGGGCAAAACCGCCCTCCg > 1:1109633/1‑151 (MQ=255) | CGGTAAAACCTAGTCAATCAGACCTCCGCCCATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATTCCCACCAGCATGGC‑GGTTAAGGTTGCGGG‑AATCAGCAA‑GCCCGCCACTTTTACCCGATTTTCCGGTGCGGCAGTGAAGTACATCGCTAAAGAAATGCCCACGGCACCAAAGATTTTTGAGTTACCGTGCAGGGCAAAACCGCCTTCCG > NC_000913/3862488‑3862786 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |