| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_012417 | = 1057 | 1100 (0.790) | 5 (0.000) | 4/214 | NT | 0.46% | coding (138/192 nt) | USA300HOU_RS15665 | hypothetical protein |
| ? | NC_012417 | = 1103 | 1237 (1.070) | coding (92/192 nt) | USA300HOU_RS15665 | hypothetical protein | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
Only 100 of 563 total aligned reads displayed.
TGCAAGTGATGAAGATAAAACAACAGACGAAGAAGAAAAAGCACATTCAATTACCGCAATTTGGAATTTCGAAAAGCAAAATTATTATTTAAGACATTAGTGTTGACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_012417/897‑1057‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtactgtcttatttttgtgacaCAATATATTGCGTTTGTCTTATTTTTGTGACACTACATACAGCATTTGTCACAAAAATAAGACAGTACTTTTTTATAAAAAATCAACAAAAAAGACATTAGTCAACACTAATGTCTTAAATAATAATTTTGCTTTTCGA < NC_012417/1103‑965 TGCAAGTGATGAAGATAAAACAACAGACGAAGAAGAAAAAGCACATTCAATTACCGCAATTTGGAATTTCGAAAAGCAAAATTATTATTTAAGACATTAGTGTTGACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAG > 1:332005/1‑140TGCAAGTGATGAAGATAAAACAACAGACGAAGAAGAAAAAGCACATTCAATTACCGCAATTTGGAATTTCGAAAAGCAAAATTATTATTTAAGACATTAGTGTTGACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAG > 1:15047/1‑140 GCAAGTGATGAAGATAAAACAACAGACGAAGAAGAAAAAGCACATTCAATTACCGCAATTTGGAATTTCGAAAAGCAAAATTATTATTTAATACATTAGTGTTGACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGT < 2:380316/140‑1 GCAAGTGATGAAGATAAAACAACAGACGAAGAAGAAAAAGCACATTCAATTACCGCAATTTGGAATTTCGAAAAGCAAAATTATTATTTAAGACATTAGTATTGACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGT > 1:34246/1‑140 CAAGTGATGAAGATAAAACAACAGACGAAGAAGAAAAAGCACATTCAATTACCGCTATTTGGAATTTCGAAAAGCAAAATTATTATTTAAGACATTAGTGTTGACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTA > 1:456997/1‑140 AGTGATGAAGATAAAACAACAGACGAAGAAGAAAAAGCACATTCAATTACCGCAATTTGGAATTTCGAAAAGCAAAATTATTATTTAAGACATTAGTGTTGACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACT < 1:145203/140‑1 AGTGATGAAGATAAAACAACAGACGAAGAAGAAAAAGCACATTCAATTACCGCAATTTGGAATTTCGAAAAGCAAAATTATTATTTAAGACATTAGTGTTGACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACT > 1:165185/1‑140 AGTGATGAAGATAAAACAACAGACGAAGAAGAAAAAGCACATTCAATTACCGCAATTTGGAATTTCGAAAAGCAAAATTATTATTTAAGACATTAGTGTTGACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACT > 1:27154/1‑140 AGTGATGAAGATAAAACAACAGACGAAGAAGAAAAAGCACATTCAATTACCGCAATTTGGAATTTCGAAAAGCAAAATAATTATTTAAGACATTAGTGTTGACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACT > 2:53687/1‑140 taataAAGATAAAACAATAGAAGAAGAAGAAAAAGCACATTAATTTACCGTTATTTGGAATGTCGAAAAGGAAAATTATTATTTAAGACAATAGTGTTGACTAATGTTTTTTTTGTTGATTTTTTATAAAAAAGTACTGT < 2:3935/135‑1 TGATGTGGATTAAACAACAGACGAAGAAGAAAAAGCATATTCAATTTCCGCAATTTGGAATTTTTATAAGTAAAATTATTATTTAAGACATTAGTGTTGACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGT < 1:51804/140‑1 GATGAAGATAAAACAACAGACGAAGAAGAAAAAGCACATTCAATTACCGCAATTTGGAATTTCGAAAAGCAAAATTATTATTTACGACATTACTGTTGACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTC > 1:405896/1‑140 GATGAAGATAAAACAACAGACGAAGAAGAAAAAGCACATTCAATTACCGCAATTTGGAATTTCGAAAAGCAAAATTATTATTTAAGACATTAGTGTTGACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTC > 1:284553/1‑140 GATGAAGATAAAACAACAGACGAAGAAGAAAAAGCACATTCAATTACCGCAATTTGGAATTTCGAAAAGCAAAATTATTATTTAAGACATTAGTGTTGACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTC < 1:66637/140‑1 GATGAAGATAAAACAACAGACGAAGAAGAAAAAGCACATTCAATTACCGCAATTTGGAATTTCGAAAAGCAAAATTAGTATTTAAGACATTAGTGTTGACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTC > 1:100342/1‑140 ataAAGATAAAACAACAGACGAAGAAGAAAAAGCACATTCAATTACCGCAATTTGGAATTTCGAAAAGCAAAATTATTATTTAAGACATTAGTGTTGACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCT < 1:218206/137‑1 ATGAAGATAAAACAACAGACGAAGAAGAAAAAGCACATTCAATTACCGCAATTTGGAATTTCGAAAAGCAAAATTATTATTTAAGACATTAGTGTTGACTAATGTCTTTTTTGTTGGTTTTTTATAAAAAAGTACTGTgt > 2:44458/1‑138 ATGAAGATAAAACAACAGACGAAGAAGAAAAAGCACATTCAATTACCGCAATTTGGAATTTCGAAAAGCAAAATTATTATTTAAGACATTAGTGTTGACTAATGTCTTTTTTGTTGATTTTTTATAAAAAGGTACGGTCT > 2:91703/1‑140 ATGAAGATAAAACAACAGACGAAGAAGAAAAAGCACATTCAATTACCGCAATTTGGAATTTCGAAAAGCAAAATTATTATTTAAGACATTAGTGTTGACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTtt > 2:428942/1‑138 ATGAAGATAAAACAACAGACGAAGAAGAAAAAGCACATTCAATTACCGCAATTTGGAATTTCGAAAAGCAAAATTATTATTTAAGACATTAGTGTTGACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCT < 1:549162/140‑1 ATGAAGATAAAACAACAGACGAAGAAGAAAAAGCACATTCAATTACCGCAATTTGGAATTTCGAAAAGCAAAATTATTATTTAAGACATTAGTGTTGACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCT < 2:214783/140‑1 ATGAAGATAAAACAACAGACGAAGAAGAAAAAGCACATTCAATTACCGCAATTTGGAATTTCGAAAAGCAAAATTATTATTTAAGACATTAGTGTTGACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCT > 2:474282/1‑140 ATGAAGATAAAACAACAGACGAAGAAGAAAAAGCACATTCAATTACCGCAATTTGGAATTTCGAAAAGCAAAATTATTATTTAAGACATTAGTGTTGACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCT < 1:415120/140‑1 ATGAAGATAAAACAACAGACGAAGAAGAAAAAGCACATTCAATTACCGCAATTTGGAATTTCGAAAAGCAAAATGATTATTTAAGACATTAGGGTTGACTAATGTCTTTTTTGTTGATGTTTTATAAAAAAGTACTGTCT < 1:256868/140‑1 TGAAGATAAAACAACAGACGAAGAAGAAAAAGCACATTCAATTACCGCAATTTGGAATTTCGAAAAGCAAAATTATTATTTAAGACATTAGTGTTGACTAATGTCTTTTTTGTTTATTTTTTATAACAAAGTACTGTCTT > 2:152252/1‑140 GAAGATAAAACAACAGACGAAGAAGAAAAAGCACATTCAATTACCGCAATTTGGAATTTCGAAAAGCAAAATTATTATTTAAGACATTAGTGTTGACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTA > 2:69698/1‑140 GAAGATAAAACAACAGACGAAGAAGAAAAAGCACATTCAATTACCGCAATTTGGAATTTCGAAAAGCAAAATTATTATTTAAGACATTAGTGTTGACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTA > 1:105698/1‑140 GAAGATAAAACAACAGACGAAGAAGAAAAAGCACATTCAATTACCGCAATTTGGAATTTCGAAAAGCAAAATTATTATTTAAGACATTAGTGTTGACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCCTA > 2:369531/1‑140 GAAGATAAAACAACAGACGAAGAAGAAAAAGCACATTCAATTACCGCAATTTGGAATTTCGAAAAGCAAAATTATGATTTAAGACATTAGTGTTGACTAATGTCTTTATTGTTGATTTTTTATAAAAAAGTACTGTCCTA > 2:27892/1‑140 AAGATAAAACAACAGACGAAGAAGAAAAAGCACATTCAATTACCGCAATTTGGAATTTCGAAAAGCAAAATTATTATTTAAGACATTAGTGTTGCGAAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTAT < 1:428781/140‑1 AAGATAAAACAACAGACGAAGAAGAAAAAGCACATTCAATTACCGCAATTTGGAATTTCGAAAAGCAAAATTATTATTTAAGACATTAGTGTTGACTAATGTCTTTTTTGTTGATTTTTTATAAAAACGTACTGTCTTAT > 1:158983/1‑140 AGATAAAACAACAGACGAAGAAGAAAAAGCACATTCAATTACCGCAATTTGGAATTTCGAAAAGCAAAATTATTATTTAAGACATTAGTGTTGACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATT > 2:79554/1‑140 TAAAACAACAGACGAAGAAGAAAAAGCACATTCAATTACCGCAATTTGGAATTTCGAAAAGCAAAATTATTATTTAAGACATTAGTGTTGACTAATGTCTTTTTTGTTGTTTTTTTATAAAAAAGTACTGTCTTCTTTTT > 2:49977/1‑140 TAAAACAACAGACGAAGAAGAAAAAGCACATTCAATTACCGCAATTTGGAATTTCGAAAAGCAAAATTATTATTTAAGACATTAGTGTTGACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTT > 1:392874/1‑140 AACAACAGACGAAGAAGAAAAAGCACATTCAATTACTGCAATTTGGAATTTCGAAAAGCAAAATTATTATTTAAGACATTAGTGTTGACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTG < 1:448032/140‑1 AACAACAGACGAAGAAGAAAAAGCACATTCAATTACCGCAATTTGGAATTTCGAAAAGCAAAATTATTATTTAAGACATTAGTGTTGACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTG > 2:486243/1‑140 cCAACAGACGAAGAAGAAAAAGCACATTCAATTACCGCAACTTGGAATTTCGAAAAGCAAAATTATTATTTAAGACATTAGTGTTGACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGA < 2:549213/139‑1 ACAACATACGAAAAAAAAAAAGCACATTCAATTACCGCAATTTGGAATTTCGAAAAGCAAAATTATTATTTAAGACATTAGTGTTGACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGA < 1:135987/140‑1 ACAACAGACGAAGAAGAAAAAGCACATTCAATTACCGCAATTTGGAATTTCGAAAAGCAAAATTATTATTTAAGACATTAGTGTTGACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGA < 2:170627/140‑1 ACAACAGACGAAGAAGAAAAAGCACATTCAATTACCGCAATTTGGAATTTCGAAAAGCAAAATTATTATTTAAGACATTAGTGTTGACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGA < 1:182963/140‑1 ACAACAGACGAAGAAGAAAAAGCACATTCAATTACCGCAATTTGGAATTTCGAAAAGCAAAATTATTATTTAAGACATTAGTGTTGACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGA < 2:192243/140‑1 ACAACAGACGAAGAAGAAAAAGCACATTCAATTACCGCAATTTGGAATTTCGAAAAGCAAAATTATTATTTAAGACATTAGTGTTGACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGA < 2:309728/140‑1 acACAGACGAAGAAGAAAAAGCACATTCAATTACCGCAATTTGGAATTTCGAAAAGCAAAATTATTATTTAAGACATTAGTGTTGACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGAC < 2:435671/138‑1 CAACAGAGGAAGAAGAAAAAGCACATTCAATTACCGCAATTTGGAATTTCGAAAAGCAAAATTATTATTTAAGACATTAGTGTTGACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGAC < 2:241791/140‑1 CAACAGACGAATAAGCAAAAGCACATTCAATTACCGCAATTTGGAATTTCGAAAAGCAAAATTATTATTTAAGACATTAGTGTTGACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGAC < 1:196122/140‑1 CAACAGACGAAGAAGAAAATGCACATTCAATTACCGCAATTTGGAATTTCGAAAAGCAAAATTATTATTTAAGACATTAGTGTTGACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGAC < 1:76763/140‑1 CAACAGACGAAGAAGAAAAAGCACATTCAATTACCGCAATTTGGAATTTCGAAAAGCAAAATTATTATTTAAGACATTAGTGTTGACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGAC < 2:178218/140‑1 CAACAGACGAAGAAGAAAAAGCACATTCAATTACCGCAATTTGGAATTTCGAAAAGCAAAATTATTATTTAAGACATTAGTGTTGACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGAC < 1:419888/140‑1 CAACAGACGAAGAAGAAAAAGCACATTCAATTACCGCAATTTGGAATTTCGAAAAGCAAAATTATTATTTAAGACATTAGTGTTGACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGAC < 2:143975/140‑1 CAACAGACGAAGAAGAAAAAGCACATTCAATTACCGCAATTTGGAATTTCGAAAAGCAAAATTATTATTTAAGACATTAGTGTTGACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTATGAC < 2:333531/140‑1 CAACAGACGAAGAAGAAAAAGCACATTCAATTACCGCAATTTGGAATTTCGAAAAGCAAAATTATTATTTAAGACATTAGTGTTGACTAATGTCTTTTTTGTTGATTTTTCAGACAATACTACTGTCTTATTTTTGTGAC < 1:544169/140‑1 CAACAGACGAAGAAGAAAAAGCACATTCAATTACCGCAATTTGGAATTTCGAAAAGCAAAATTATTATTTAAGACATTAGTGTTGACTAATGTCTTTTTTGTTGAAAAAATATAAAAAAGTACTGTCTTATTTTTGTGAC < 2:507831/140‑1 CAACAGACCAAGAAGAAAAAGCACATTCAATTACCGCAATTTGGAATTTCGAAAAGCAAAATTATTATTTAAGACATTAGTGTTGACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTACTTTTGTCAC < 2:349179/140‑1 CAACAAACGAAGAAGAAAAAGCACATTCAATTACCGCAATTTGGAATTTCGAAAAGCAAAATTATTATTTAAGACATTAGTGTTGACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGAC < 1:362500/140‑1 AACAGACGAAGAAGAAAAAGCACATTCAATTATCGCAATTTGGAATTTCGAATACCAAAATTATTATTTAAGACATTAGTGTTGACTAATGTCTTCTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACA < 2:302354/140‑1 AACAGACGAAGAAGAAAAAGCACATTCAATTACCGCAATTTGGAATTTCGAAAAGCAAAATTATTATTTAAGACATTAGTGTTGACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACA < 1:467761/140‑1 ACAGACGAAGAAGAAAAAGCACATTCAATTACCGCAATTTGGAATTTCGAAAAGCAAAATTATTATTTAAGACATTAGTGTTGACTAATGTCTTTTTTGTTGATTTTTTACAAATAATTACTGTCTTATTTTTGTGACAt > 2:358936/1‑139 aatctaTACTTTTTTATTTATGGAACACAATATATTTCCTTTGTCTTATTTTTGTGACACTACATACAGCATTTGTCACAAAAATAATACAGTACTTTTTTATAAAAAATCAACAAAAAAGACATTAGTCAACACTAATG < 2:328039/134‑1 GTACTGTCTTATTTTTGTGACACAATATATTGCGTTTGTCTTATTTTTGTGACACTACATACAGCATTTGTCACAAAAATAAGACAGTACTTTTTTATAAAAAATCAACAAAAAAGACATTAGTCAACACTAATGTCTTA > 2:268818/1‑140 TACTGTCTTATTTTTGTTACACAATATATTGCGTTTGTCTTATTTTTGTGACACTACATACAGCATTTGTCACAAAAATAAGACAGTACTTTTTTATAAAAAATCAACAAAAAAGACATTAGTCAACACTAATGTCTTAA > 2:40858/1‑140 TACTGTCTTATTTTTGTGACACAATATATTGCGTTTGTCTTATTTTTGTGACACTGCATACAGCATTTGTCACAAAAATAAGAAAGTACTTTTTTATAAAAAATCAACAAAAAAGACATTAGTCAACACTAATGTCTTAA > 1:499773/1‑140 TACTGTCTTATTTTTGTGACACAATATATTGCGTTTGTCTTATTTTTGTGACACTACATACAGCATTTGTCACAAAAATAAGACAGTACTTTTTTATAAAAAATCAACAAAAAAGACATTAGTCAACACTAATGTCTTAA > 2:83040/1‑140 TACTGTCTTATTTTTGTGACACAATATATTGCGTTTGTCTTATTTTTGTGACACTACATACAACAATTTTCACAAAAATAAGACAGTACTTTTTTATAAAAAATCAACAAAAAATACATTAGTAAAAACTAAAGTATTAA > 1:48358/1‑140 ACTGTCTTATTTTTGTGACACAATATATTGCGTTTGTCTTATTTTTGTGACACTACATACAGCATTTGTCACAAAAATAAGACAGTACTTTTTTATAAAAAATCAACAAAAAAGACATTAGTCAACACTAATGTCTTAAA < 1:92380/140‑1 ACTGTCTTATTTTTGTGACACAATATATTGCGTTTGTCTTATTTTTGTGACACTACATACAGCATTTGTCACAAAAATAAGACAGTACTTTTTTATAAAAAATCAACAAAAAAGACATTAGTCAACACTAATGTCTTAAA > 2:521143/1‑140 ACTGTCTTATTTTTGTGACACAATATATTGCGTTTGTCTTATTTTTGTGACACTACATACAGCATTTGTCACAAAAATAAGACAGTACTTTATTATAAAAAATCAACAAAAAAGACATTAGTCAACACTAATGTCTTAAA > 1:125171/1‑140 ACTATCTTATTTATGTGACACAATATATTGAGTTTGTCTTATTCTTTTGACACTACATACAACATTAGTCACAAAAAAAAGACAGTACTTTTTAATAAAAAATCAACAAAAAAGACATTAGTCAACACTAATGTCTTAAA > 2:199633/1‑140 TGTCTTATTTTTGTGACACAATATATTGCGTTTGTCTTATTTTTGTGACACTACATACAGCATTTGTCACAAAAATAAGACAGTACTTTTTTATAAAAAATCAACAAAAAAGACATTAGTCAACACTAATGTCTTAAATA > 1:239007/1‑140 GTCTTATTTTTGTTACACAATATATTGCGTTTGTCTTATTTTTGTGACACTACATACAGCATTTGTCACAAAAATAAGACAGTACTTTTTTATAAAAAATCAACAAAAAAGACATTAGTCAACACTAATGTCTTAAATAA < 1:354979/140‑1 GTCTTATTTTTGTCACAACATATATTGCGTTTGTCTTATTTTTGTGACACTACATACAGCATTTTTCACAAAAATAAGACAGTACTTTTTTATAAAAAAGCAACAAAAAAGACACTAGTCAACACTAATGTCTTAAATAA < 1:229469/140‑1 TCTTATTTTTGTGACACAATATATTGCGTTTGTCATATTTTTGTGACACTACATACAACATTTGTCACAAAAATAAGACAGTACTTTTTTATAAAAAATCAACAAAAAAGACATTAGTCAACACTAATGTCTTAAATAAT > 1:25330/1‑140 CTTATTTTTGTGACACAATATATTGCGTTTGTCTTATTTTTGTGACACTACATACAGCATTTGTCACAAAAATAAGACAGTACTTTTTTATAAAAAATCAACAAAAAAGACATTAGTCAACACTAATGTCTTAAATAATA > 2:23238/1‑140 ATTTTTGTGACACAATATATTGCGTTTGTCTTATTTTTGTGACACTACATACAGCATTTGTCACAAAAATAAGACAGTACTTTTTTATAAAAAATCAACAAAAAAGACATTAGTCAACACTAATGTCTTAAATAATAATT < 2:412015/140‑1 ATTTTTGTGACACAATATATTGCGTTTGTCTTATTTTTGTGACACTACATACAGCATTTGTCACAAAAATAAGACAGTACTTTTTTATAAAAAATCAACAAAAAAGACATTAGACAACCCTAATGTCTTAAATAATAATT > 2:385738/1‑140 ATTTTTGTGACACAATATATTGCGTTTGTCTTATTTTTGTGACACTACATACAGCATTTGTCACAAAAATAAGACAGTACTTATATATAAAAAATCAACAAAAAAGACATTAGTCAACACTAATGTCTTAAATAATAATT > 1:173406/1‑140 ATTTTTGTGAAAAAATTAATTGCCGTTGTCTTATTTTTGGTACACTACATACAGCATTTGTCACAAAAATAAGACAGTACTTTTTTATAAAAAATCAACAAAAAAGACATTAGTCAACACTAATGTCTTAAATAATAATT < 2:462139/140‑1 TTTTTGTGACACAATATATTGCGTTTGTCTTATTTTTGTGACACTACATACAGCATTTGTCACAAAAATAAGACAGTACTTTTTTATAAAAAATCAACAAAAAAGACATTAGTCAACACTAATGTCTTAAATAATAATTT < 1:434991/140‑1 TTTTTGTGACACAATATATTGCGTTTGTCTTATTTTTGTGACACTACATACAGCATTTGTCACAAAAATAAGACAGTACTTTTTTATAAAAAATCAACAAAAAAGACATTAGTCAACACTAATGTCTTAAAAAATAATTT > 1:532550/1‑140 TTTTTGTGACAAAATATATTGCGTTTGTCTTATTTTTGTGACATTACATACAGCATTTGTCACAAAAATAAGACAGTACTTTTTTATAAAAAATCAACAAAAAAGACATTAGTCAACACTAATGTCTTAAATAATAATTT < 1:386495/140‑1 TTTTTGGAACACAATATATTGCGTTTGTCTTATTTTTGTGACACTACATACAGCATTTGTCACAAAAATAAGACAGTACTTTTTTATAAAAAATCAAAAAAAAAGACATTAGTCAACACTAATGTCTTAAATAATAATTT < 2:276716/140‑1 TTTTGTGACACAATATATTGCGTTTGTCTTATTTTTGTGACACTACATACAGCATTTGTCACAAAAATAAGACAGTACTTTTTTATAAAAAATCAACAAAAAAGACATTAGTCAACACTAATGTCTTAAATAATAATTTT < 2:206059/140‑1 TTTGTGACACAATATATTGCGTTTGTCTTATTTTTGTGACACTACATACAGCATTTGTCACAAAAATAAGACAGTACTTTTTTATAAAAAATCAACAAAAAAGACATTAGTCAACACTAATGTCTTAAATAATAATTTTG > 2:544758/1‑140 TTTGTGACACAATATATTGCGTTTGTCTTATTTTTGTGACACTACATACAGCATTTGTCACAAAAATAAGACAGTACTTTTTTATAAAAAATCAACAAAAAAGACATTAGTCAACACTAATGTCTTAAATAATAATTTTG > 1:321936/1‑140 TTTGTGACACAATATATTGCGTTTGTCTTATTTTTGTGACACTACATACAGCATTTGTCACAAAAATAAGACAGTACTTTTTTATAAAAAATCAACAAAAAAAACATTAATCAACACTAAAGACTTAAATAATAATTTTG > 1:118017/1‑140 TTGTGACACAATATATTGCGTTTGTCTTATTTTTGTGACACTACATACAGCATTTGTCACAAAAATAAGACAGTACTTTTTTATAAAAAATCAACAAAAAAAACATAAGTCAACACTAATGTCTTAAATAATAATTTTGC > 1:208138/1‑140 TGTGACACAATATATTGCGTTTGTCTTATTTTTGTGACACTACATACAGCATTTGTCACAAAAATAAGACAGTACTTTTTTATAAAAAATCAACAAAAAAGACATTAGTCAACACTAATGTCTTAAATAATAATTTTGCT > 2:65062/1‑140 tgtCACAATATATTGCGTTTGTCTTATTTTTGTGACACTACATACAGCATTTGTCACAAAAATAAGACAGTACTTTTTTATAAAAAATCAACAAAAAAGACATTAGTCAACACTAATGTCTTAAATAATAATTTTGCTTT < 2:295387/137‑1 TGACACAATATATTGCGTTTGTCTTATTTTTGTGACACTACATACAGCATTTGTCACAAAAATAAGACAGTACTTTTTTATAAAAAATCAACAAAAAAGACATTAGTCAACACTAATGTCTTAAATAATAATTTTGCTTT < 1:373140/140‑1 GACACAATATATTGCGTTTGTCTTATTTTTGTGACACTACATACAGCATTTGTCACAAAAATAGGACAGTACTTTTTTATAAAAAATCAACAAAAAAGACATTAGTCAACACTAATGTCTTAAATAATAATTTTGCTTTT > 1:323826/1‑140 ACACAATATATTGCGTTTGTCTTATTTTTGTGACACTACATACAGCATTTGTCACAAAAATAAGACAGTACTTTTTTATAAAAAATCAACCAACACAAAGTTACACAACACTAATGTCTTAAATAATAATTTTGCTTTTg > 2:114298/1‑139 ACACAATATATTGCGTTTGTCTTATTTTTGTGACACTACATACAGCATTTGTCACAAAAATAAGACAGTACTTTTTTATAAAAAATCAACAAAAAATACATTACTCAACAATAATGTCTTGAATAATAATTTTGCTTTTC > 2:106535/1‑140 ACACAATATATTGCGTTTGTCTTATTTTTGTGACACTACATACAGCATTTGTCACAAAAATAAGACAGTACTTTTTTATAAAAAATCAACAAAAAAGACATTAGTCAACACTAATGTCTTAAATAATAATTTTGCTTTTC > 1:10901/1‑140 ACACAATATATTGCGTTTGTCTTATTTTTGTGACACTACATACAGCATTTGTCACAAAAATAAGACAGTACTTTTTTATAAAAAATCAACAAAAAAGACATTAGTCAACACTAATGTCTTAAATAATAATTTTGCTTTTC > 2:452672/1‑140 ACACAATATATTACGTTTGTATTATTTTTGTTGCACTATATACAGCATTTGTCACAAAAATAAGACAGTACTTTTTTATAAAAAATCAACAAAAAAGACATTAGTCAACACTAATGTCTTAAATAATAATTTTACTTTTC > 2:130421/1‑140 CACAATATATTGCGTTTGTCTTATTTTTGTGACACTACATACAGCATTTGTCACAAAAATAAGACAGTACTTTTTTATAAAAAATCAACAAAAAAGACATTAGTCAACACTAATGTCTTAAATAATAATTTTGCTTTTCG > 1:30697/1‑140 CACAATATATTGCGTTTGTCTTATTTTTGTGACACTACATACAGCATTTGTCACAAAAATAAGACAGTACTTTTTTATAAAAAATCAACAAAAAAGACATTAGTCAACACTAATGTCTTAAATAATAATTTTGCTTTTCG > 1:295898/1‑140 CACAATATATTGCGTTTGTCTTATTTTTGTGACACTACATACAGCATTTGTCACAAAAATAAGACAGTACTTTTTTATAAAAAATCAAAAAAAAAGACATTAGTCCACACTACTGTCTTAAATAATAATTTTGTTTTTCG > 2:221859/1‑140 CACAATATATTGCGTTTGTCTTATTTTTGTGACACTACATACAGCAATTGTCACTTTAATATGCCAGTACTTTTTTATAAAAAATCAACAAAAAAGACATTAGTCAACACTAATGTCTTAAATAATAATTTTGCTTTTCG > 2:251615/1‑140 ACAATATATTGCGTTTGTCTTATTTTTGTGACACTACATACAGCATTTGTCACAAAAATAAGACAGTACTTTTTTATAAAAAATCAACAAAAAAGACATTAGTCAACACTAATGTCTTAAATAATAATTTTGCTTTTCGA < 1:441497/140‑1 ACAATATATTGCGTTTGTCTTATTTTTGTGACACTACATACAGCATTTGTCACAAAAATAAGACAGTACTTTTTTATAAAAAATCAAAAAAAAAGACATTAGTCAACACTAATGTCTTAAATAATAATTTTGCTTTTCGA > 2:161764/1‑140 TGCAAGTGATGAAGATAAAACAACAGACGAAGAAGAAAAAGCACATTCAATTACCGCAATTTGGAATTTCGAAAAGCAAAATTATTATTTAAGACATTAGTGTTGACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_012417/897‑1057‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtactgtcttatttttgtgacaCAATATATTGCGTTTGTCTTATTTTTGTGACACTACATACAGCATTTGTCACAAAAATAAGACAGTACTTTTTTATAAAAAATCAACAAAAAAGACATTAGTCAACACTAATGTCTTAAATAATAATTTTGCTTTTCGA < NC_012417/1103‑965 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |