| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913_3_bme_pgi | 4,235,408 | Δ1 bp | intergenic (‑2175/‑499) | lysC ← / → yjbE | lysine‑sensitive aspartokinase 3/extracellular polysaccharide production threonine‑rich protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913_3_bme_pgi | 4,235,407 | 0 | A | . | 98.4% | 282.0 / ‑1.2 | 64 | intergenic (‑2174/‑500) | lysC/yjbE | lysine‑sensitive aspartokinase 3/extracellular polysaccharide production threonine‑rich protein |
| Reads supporting (aligned to +/- strand): ref base A (0/1); new base . (27/35); total (27/37) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.05e-01 | |||||||||||
TCAATGCCTTCGATCAATGGGGCGTGGAACTGGGTAAGGAACTGGCGACGGAACTTTTGCCGGTTGTATCGGGCAAGGAAGGGGCGAGTGGTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATGCGCGA‑AGGAAAGCTTGAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCGATATGTACATCGTATTCGGCAATTAATACATAGCA > NC_000913_3_bme_pgi/4235259‑4235545 | tCAAGGCCTTCGATCAATGGGGCGTGGAACTGGGTAAGGAACTGGCGACGGAACTTTTGCCGGTTGTATCGGGCAAGGAAGGGGCGAGTGGTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATGCGCGA‑AGGAAAGCTTGa < 2:11979/149‑1 (MQ=255) aaggCCTTCGATCAATGGGGCGTGGAACTGGGTAAGGAACTGGGGCCGGAACTTTTGCCGGTTGTAGCGGGCAAGGAAGGGGCGCGTGGTCGCGACGCTTCCACGCAAGGGGTTGTCGCGCATCTGCATGCGCGA‑AGGAAAGCTTGatc < 2:867500/146‑3 (MQ=255) aaTGCCTTCGATCAATGGGGCGTGGAACTGGGTAAGGAACTGGCGACGGAACTTTTGCCGGTTGTATCGGGCAAGGAAGGGGCGAGTGGTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATGCGCGA‑AGGAAAGCTTGatc > 1:549621/1‑147 (MQ=255) gtCGATCACTGGGGCGTGGAACTGGGAAAGGAACTGGGGACGGAACTTTTGCCGGTTGTATCGGGCAAGGAAGGGGCGAGTGGTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATGCGCGA‑AGGAAAGCTTG‑ATCAtcgtc < 2:158930/148‑1 (MQ=255) aTCAATGGGGCGTGGAACTGGGTAAGGAACTGGCGACGGAACTTTTGCCGGTTGTATCGGGCAAGGAAGGGGCGAGTGGTCGCGACCCTCCCACGCAAGGGCTTGTCGCGCATCTGCATGCGCGA‑AGGAAAGCTTG‑ATCATCGTCGata < 1:340023/149‑1 (MQ=255) aTGGGGCGTGGAACTGGGTAAGGAACTGGCGACGGAACTTTTGCCGGTTGTATCGGGCAAGGAAGGGGCGAGTGGTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATGCGCGA‑AGGAAAGCTTG‑ATCATCGTCGATATGTa < 2:978532/149‑1 (MQ=255) tGGGGGGTGGAACTGGGTAAGGAACTGGGGACGGAACTTTTGCCGGTTGTATCGGGCAAGGAAGGGGCGAGTGGTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTCCATGCGCGA‑AGGAAAGCTTG‑ATCATCGTCGATATGTAg < 2:877866/149‑1 (MQ=255) ggggCGTGGAACTGGGTAAGGAACTGGCGACGGAACTTTTGCCGGTTGTATCGGGCAAGGAAGGGGCGAGTGGTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATGCGCGA‑AGGAAAGCTTG‑ATCATCGTCGATATGTAgg > 1:713846/1‑149 (MQ=255) ggAACTGGGTAAGGAACTGGCGACGGAACTTTTGCCGGTTGTATCGGGCAAGGAAGGGGCGAGTGGTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATGCGCGA‑AGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATa > 2:477382/1‑149 (MQ=255) aaCTGGGTAAGGAACTGGCGACGGAACTTTTGCCGGTTGTATCGGGCAAGGAAGGGGCGAGTGGTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATGCGCGA‑AGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAg < 1:758741/149‑1 (MQ=255) aCTGGGTAAGGAACTGGCGACGGAACTTTTGCCGGTTGTATCGGGCAAGGAAGGGGCGAGTGGTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATGCGCGA‑AGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAgg < 1:290585/149‑1 (MQ=255) ggTAAGGAACTGGCGACGGAACTTTTGCCGGTTGTATCGGGCAAGGAAGGGGCTAGTGGTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATGCGCGA‑AGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGtt > 1:664470/1‑149 (MQ=255) tAAGGAACTGGCGACGGAACTTTTGCCGGTTGTATCGGGCAAGGAAGGGGCGAGTGGTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATGCGCGA‑AGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGttaa > 2:366128/1‑147 (MQ=255) ggAACTGGCGACGGAACTTTTGCCGGTTGTATCGGGCAAGGAAGGGGCGAGTGGTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATGCGCGA‑AGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCAcgc < 2:549066/149‑1 (MQ=255) ggAACTGGCGACGGAACTTTTGCCGGTTGTATCGGGCAAGGAAGGGGCGAGTGGTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATGCGCGA‑AGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCAcgc < 1:284477/149‑1 (MQ=255) gCGACGGAACTTTTGCCGGTTGTATCGGGCAAGGAAGGGGCGAGTGGTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATGCGCGA‑AGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATcc > 1:554594/1‑149 (MQ=255) aCGGAACTTTTGCCGGTTGTATCGGGCAAGGAAGGGGCGAGTGGTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATGCGCGA‑AGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGc > 2:734696/1‑149 (MQ=255) aCGGAACTTTTGCCGGTTGTATCGGGCAAGGAAGGGGCGAGTGGTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATGCGCGA‑AGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGc > 2:735419/1‑149 (MQ=255) ggAACTTTTGCCGGTTGTATCGGGCAAGGAAGGGGCGAGTGGTCGCGACGCTTCCACGCAAGAGCTTGTCGCGCATCTGCATGCGCGA‑AGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGAGAAGGCGTTCCCGCCGCATCCGGCaa > 1:983451/1‑149 (MQ=255) gAACTTTTGCCGGTTGTATCGGGCAAGGAAGGGGCGAGTGGTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATGCGCGA‑AGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAc > 1:438957/1‑149 (MQ=255) aaCTTTTGCCGGTTGTATCGGGCAAGGAAGGGGCGAGTGGTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATGCGCGA‑AGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAcc < 1:965212/149‑1 (MQ=255) ttttGCCGGTTGTATCGGGCAAGGAAGGGGCGAGTGGTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATGCGCGA‑AGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGAt < 1:507671/149‑1 (MQ=255) gCCGGTTGTATCGGGCAAGGAAGGGGCGAGTGGTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATGCGCGA‑AGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCt < 2:371586/149‑1 (MQ=255) cGGTTGTATCGGGCAAGGAAGGGGCGAGTGGTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATGCGCGA‑AGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGa > 2:456530/1‑149 (MQ=255) cGGTTGTATCGGGCAAGGAAGGGGCGAGTGGTCGCGACGCTTCAACGCAAGGGCTTGTCGCGCATCTGCATGCGCGA‑AGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGa > 1:156603/1‑149 (MQ=255) ggTTGTATCGGGCAAGGAAGGAACGAGTGGTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCAAGCGCGA‑AGGAAAGCTTG‑ATAATCGTCGATATGTCGGCCGGATACGGCGTTCCCGCCGCATCCGTGCACCGATGCCtcag > 2:436698/1‑146 (MQ=255) ttGTATCGGGCAAGGAAGGGGCGAGTGGTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATGCGCGA‑AGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGc > 1:262157/1‑149 (MQ=255) tATCGGGCAAGGAAGGGGCGAGTGGTCGCGACGCTTCCACGCAAGGGCTTGTCACGCATCTGCATGCGCGA‑GGGAAAGGTTG‑AGCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCACCCGATGCCTGCTGAGAc > 2:192341/1‑149 (MQ=38) gggCAAGGAAGGGGCGAGTGGTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATGCGCGA‑AGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCgg > 2:671755/1‑149 (MQ=255) ggCAAGGAAGGGGCGAGTGGTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATGCGCGA‑AGGAAAGCTTGatc > 1:864844/1‑78 (MQ=255) ggCAAGGAAGGGGCGAGTGGTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATGCGCGA‑AGGAAAGCTTGatc < 2:864844/80‑3 (MQ=255) ggCAAGGAAGGGGCGAGTGGTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATGCGCGA‑AGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAGCGATGCCTGGTGCGACGCggg > 1:121479/1‑148 (MQ=255) ggCAAGGAAGGGGCGAGTGGTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATGCGCGA‑AGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGt > 1:706915/1‑149 (MQ=255) aaggaaggGTCGAGTGGTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATGCGCGA‑AGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTcgc < 1:708714/149‑1 (MQ=255) aggaaggGGCGAGTGGTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATGCGCGA‑AGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTcgcg < 1:714385/149‑1 (MQ=255) aggaaggGGCGAGTGGTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATGCGCGA‑AGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTcgcg < 1:714430/149‑1 (MQ=255) ggaaggGGCGAGTGGTCGCGACGCTTCCACGCATGCGCTTTTATTACTTTTGCATGCGCGA‑AGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGt < 2:464073/149‑1 (MQ=25) ggaaggGGCGAGTGGTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATGCGCGA‑AGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGt < 2:868186/149‑1 (MQ=255) aaggGGCGAGTGGTCCCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATGCGCGA‑AGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGAGGCCTGATGCGACGCGGTCGCGTCt < 2:619049/149‑1 (MQ=255) aggGGCGAGTGGTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATGCGCGA‑AGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCtt > 2:340226/1‑149 (MQ=255) gCGAGTGGTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATGCGCGA‑AGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTcgcg > 1:33823/1‑141 (MQ=255) gCGAGTGGTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATGCGCGA‑AGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTcgcg < 2:33823/141‑1 (MQ=255) gCGAGTGGTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATGCGCGA‑AGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCa < 2:706915/149‑1 (MQ=255) cggtgggTGGCGACGCTTCTACGCAAGGGCTTGTCGCGCATTTGCATGCGCGA‑AGGAAAGCTTG‑CTCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGGATGCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAg < 2:408041/144‑1 (MQ=25) cgggTGGTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATGCGCGA‑AGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAg < 1:68482/146‑1 (MQ=255) cGAGTGGTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATGCGCGA‑AGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAg < 1:340226/149‑1 (MQ=255) aGTGGTCGCCGCGCTTCCACGCCAGGGAAGGTCGCGCAGTTGCATGCGCGA‑AGGAAAGCGTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGc < 2:664470/149‑1 (MQ=25) tgTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCCTCAGGGC‑AGG‑TTGCCTATCTCAGCGTGTATATGTAGGCCGGATAATGCGTTCACTCCGCATCCGGCAACCGATGCCTGATAAGACGCGACCGCGTCGCATCAGGcatc < 2:960493/148‑4 (MQ=12) ggTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATGCGCGA‑AGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTa < 1:477382/149‑1 (MQ=255) gTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATGCGCGA‑AGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTAc > 2:496667/1‑149 (MQ=255) tCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATGCGCGA‑AGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATAAGACGCGACCGCGTCGCATCAGGcatcga > 1:960493/1‑144 (MQ=38) cgcgACGCCTCCACGCAAGGGCTTGTCGCGCATCTGAATGCGCGA‑AGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAg < 2:334649/149‑1 (MQ=255) gcgACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATGCGCGA‑AGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCAGCATGCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAgg > 1:443991/1‑149 (MQ=255) gcgACGCTTCCACGCAAGGGCTTGGCGCGCATCTGCATGCGCGA‑AGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAgg < 2:438957/149‑1 (MQ=255) ggACGCATCCACGCAAGGGCTGGTCGAGGACCTGCATCCGCAACCGGAACGCT‑‑ATTTCTCGTCGATATGTAGGCCGGACAAGGCGTTCGCGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGt < 1:282686/148‑1 (MQ=17) tgccACCCAATGTCTTGTCGTGCATGTGCATGCGCGA‑AGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCTTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGc < 2:198637/147‑1 (MQ=25) ccACGCAAGGGCTTGTCGCGCATCTGCATGCGCGA‑AGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCAcgcc > 1:310590/1‑85 (MQ=255) ccACGCAAGGGCTTGTCGCGCATCTGCATGCGCGA‑AGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCAcgcc < 2:310590/85‑1 (MQ=255) aGGGCTTGTCGCGCATCTGAATGCGCGA‑AGGAATGCTTG‑ATCTTCGTCGATATGTAGGCCGGATAAGGCGTTCACGTCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATACCGATATGTa < 1:422512/149‑1 (MQ=25) gCTTGCCGCGCATTTGCATGCGCGA‑AGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCGATATGTACAt < 1:291334/149‑1 (MQ=255) ttGTCGCGCATCTGCATGCGCGA‑AGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTTGCGTCTTATCAGGCCTACAGGTCGATGCCGata < 2:401376/140‑1 (MQ=255) ttGTCGCGCATCTGCATGCGCGA‑AGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTTGCGTCTTATCAGGCCTACAGGTCGATGCCGata > 1:401376/1‑140 (MQ=255) gTCGCGCATCTGCATGCGCGA‑AGGAAAGCTTG‑atcatc < 2:609625/38‑1 (MQ=255) gTCGCGCATCTGCATGCGCGA‑AGGAAAGCTTG‑atcatc > 1:609625/1‑38 (MQ=255) cgcgCATCTGCATGCGCGA‑AGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTc < 1:34245/108‑1 (MQ=255) cgcgCATCTGCATGCGCGA‑AGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTc > 2:34245/1‑108 (MQ=255) gcgcATCTGCATGCGCGA‑AGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCGATATGTACATCGTAttg > 2:607864/1‑148 (MQ=255) aTCTGCATGCGCGA‑AGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATACGGCATGCGCTCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCGATATGTACATCGTATTCGGCa < 1:735419/149‑1 (MQ=37) aTCTGCATGCGCGA‑AGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGCCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCGATATGTACATCGTATTCGGCa < 1:734696/149‑1 (MQ=255) gA‑AGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCGATATGTACATCGTATTCGGCAATTAATACATAg > 1:817836/1‑149 (MQ=255) aGGAAAGCTTG‑ATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCGATATGTACATCGTATTCGGCAATTAATACATAGCa < 1:456530/149‑1 (MQ=255) | TCAATGCCTTCGATCAATGGGGCGTGGAACTGGGTAAGGAACTGGCGACGGAACTTTTGCCGGTTGTATCGGGCAAGGAAGGGGCGAGTGGTCGCGACGCTTCCACGCAAGGGCTTGTCGCGCATCTGCATGCGCGA‑AGGAAAGCTTGAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCGATATGTACATCGTATTCGGCAATTAATACATAGCA > NC_000913_3_bme_pgi/4235259‑4235545 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |