New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913_3_bme_pgi	= 697486	35 (0.790)	3 (0.070)	3/260	6.3	8.4%	intergenic (‑353/+27)	metT/asnB	tRNA‑Met/asparagine synthetase B
	?	NC_000913_3_bme_pgi	= 697492	34 (0.840)					intergenic (‑359/+21)	metT/asnB	tRNA‑Met/asparagine synthetase B
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

ATTCGGAATTTAACAATAGTGGTGGGAAATTAATCTATGAAATACTGGCCTACAGTGATGAGTTGTCAAACAGTGATGTGGCAAACCCGGAACATTTCCTTACTGCATATCAGAATCAACAAGCACCTCAATAACTGAAACAGCCCCGGATTTCACCGGGGCTGTTTCGCATTTCTTACTTATACGCCGACT‑GGTGAACACCAACCGCGCGACCAGACGGATCGTCCATTTTCTTGAACGCTTCATCCCATTCGATCGCTTTAGCGGAAGAACAAGCGACGGAAGGACCGCCCG  >  NC_000913_3_bme_pgi/697338‑697631                                                                                                                                                     |                                                                                                                                                   aTTCGGAATTTAACAATAGTGGTGGGAGATTAATCTATGAAATACTGGTGTAAAGTGATGAGTTGTTGTGTAGTGATGTGGGAAACCCGGAACATTTCCTTACTGCATATAAGAATCAACACGACACTCTATAACTGAAACAGACCCgg                                                                                                                                                    >  2:165067/1‑149 (MQ=255)      gAATTTAACAATAGTGGTGGGAAATTAATCTATGAAATACTGGCCTACAGTGATGAGTTGTCAAACAGTGATGTGGCAAACCCGGAACATTTCCTTACTGCATATCAGAATCAACAAGCACCTCAATAACTGAAACAGCCCCGGATTTc                                                                                                                                               <  1:656207/149‑1 (MQ=255)          ttAACAATAGTGGTGGGAAATTAATCTATGAAATACTGGCCTACAGTGATGAGTTGTCAAACAGTGATGTGGCAAACCCGGAACATTTCCTTACTGCATATCAGAATCAACAAGCACCTCAATAACTGAACCAGCCCCGGATTTCACCg                                                                                                                                           >  1:188404/1‑149 (MQ=255)          ttAACAATAGTGGTGGGAAATTAATCTATGAAATACTGGCCTACAGTGATGAGTTGTCAAACAGTGATGTGGCAAACCCGGAACATTTCCTTACTGCATATCAGAATCAACAAGCACCTCAATAACTGAAACAGCCCCGGATTTCACCg                                                                                                                                           >  2:312170/1‑149 (MQ=255)                                  tCTATGAAATACTGGCCTACAGTGATGAGTTGTCAAACAGTGATGTGGCAAACCCGGAACATTTCCTTACTGCATATCAGAATCAACAAGCACCTCAATAACTGAAACAGCCCCGGATTTCACCGGGGCTGTTTCGCATTTcttactta                                                                                                                   >  1:196621/1‑149 (MQ=255)                                  tCTATGAAATACTGGCCTACAGTGATGAGTTGTCAAACAGTGATGTGACAAACCCGGAACATTTCCTTACTGCATATCAGAATCAACAAGCACCTCAATAACTGAAACAGCCCCGGATTTCACCGGGGCTGTTTCGCATTTcttactta                                                                                                                   >  2:497796/1‑149 (MQ=255)                                           cgccggCCTACAGTGATGAGTTGTCAAACAGTGATGTGGCAAACCCGGAACATTTCCTTACTGCATATCAGAATCAACAACCACCTCGATATCTGAAACCGCGTCAATGGTCACCGGGGCTGTTTCGCATTTCTTACTTATACGCCGAc                                                                                                          <  1:183656/145‑1 (MQ=255)                                              tGGCCTACAGTGATGAGTTGTCAAACAGTGATGTGGCAAACCCGGAACATTTCCTTACTGGCTATGAGAATGAACAAGCACATAAATAACTTACACAGCACCGGATTACACCGGGGCTTTGCCGCATTTCTTACTTATACGCCGCCtag                                                                                                       >  2:183656/1‑147 (MQ=255)                                               ggCCTACAGTGATGAGTTGTCAAACAGTGATGTGGCAAACCCGGAACATTTCCTTACTGCATATCAGAATCAACAAGCACCTCAATAACTGAAACAGCCCCGGATTTCACCGGGGCTGTTTCGCATTACTTACTTATCAGCCgcccgct                                                                                                      >  2:726786/1‑143 (MQ=255)                                                gCCTACAGTGATGAGTTGTCAAACAGTGATTTGGCAAACCCGGAACATTTCCTTACTGCATATCAGAATCAACAAGCACCTCAATAACTGAAACAGCCCCGGATTTCCTGGGAACTGCAACGCATTTCTTACTTATACGCCGACT‑GGTg                                                                                                    >  2:739060/1‑149 (MQ=255)                                                        tgatgaGTTGTCAAACAGTGATGTGGCAAACCCGGAACATTTCCTTACTGCATATCAGAATCAACAAGCACCTCAATAACTGAAACAGCCCCGGATTTCACCGGGGCTGTTTCGCATTTCTTACTTATACGCCGACT‑GGTGAacatcta                                                                                            <  2:289561/149‑5 (MQ=255)                                                        tgatgaGTTGTCAAACAGTGATGTGGCAAACCCGGAACATTTCCTTACTGCATATCAGAATCAACAAGCACCTCAATAACTGAAACAGCCCCGGATTTCACCGGGGCTGTTTCGCATTTCTTACTTATACGCCGACT‑GGTGAACACCaa                                                                                            >  2:508154/1‑149 (MQ=255)                                                           tgaGTTGTCAAACAGTGATGTGGCAAACCCGGAACATTTCCTTACTGCATATAAGAATCAACAAGCACCTCAATAACTGAAACAGCCCCGGATTTCACCGGGGCTGTTTCGCATTTCTTACTTATACGCCGACT‑GTTGAACACCCACcg                                                                                         >  2:135476/1‑149 (MQ=255)                                                                     aaCAATGATGTGGCAAACCCGGAACATTTCCTTACTGCATATCAGAATCAACAAGCACCTCAATAACTGAAACAGCCCCGGATTTCACCGGGGCTGTTTCGCATTTCTTACTTATACGCCGACT‑GGTGAACACCAACCGCGCGACCCGa                                                                               >  2:590555/1‑149 (MQ=255)                                                                           gATGTGGCCGACGCGGAACACGTCCGTGCTGGATTTCGGGATCAAGAAGCACCTCCATAACTGAAACAGCCCCGGATTTCACCGGGGCTGTTTCGCGTTTCTTACTGATCCGCCGACT‑GGTGAACACCAACCGCGCGAGCAGACGGATc                                                                         <  2:70334/149‑1 (MQ=255)                                                                             gtcggCCAACCCGGAACATTTCCTTACTGCATATCAGAATCAACAAGCACCTCAATAACTGAAACAGCCCCGGATTTCACCGGGGCTGTTTCGCATTTCTTACTTATACGCCGACT‑GGTGAACACCAACCGCGCGACCAGACGGATCGt                                                                       <  2:256115/146‑1 (MQ=255)                                                                                 gCAAACCCGGAACATTTCCTTACTGCATATCAGAATCAACAAGCACCTCAATAACTGAAACAGCCCCGGATTTCACCGGGGCTGTTTCGCATTTCTTACTTATACGCCGACT‑GGTGAACACCAACCGCGCGACCAGACGGATCGTCCAt                                                                   >  1:33440/1‑149 (MQ=255)                                                                                   aaaCCCGGAACATTTCCTTACTGCATATCAGAATCAACAAGAACCTCAATAACTGAAACAGCCCCGGATTTCACCGGGGCTGTTTCGCATTTCTTACTTATACGCCGACT‑GGTGAACACCAACCGCGCGCCCAGACGGCTCGGCCAttg                                                                 >  1:520861/1‑148 (MQ=255)                                                                                     aCCCGGAACATTACCTTACTGCATATCAGAATCAACAAGCACCTCAATAACTGAAACAGCCCCGGATTTCACCGGGGCTGTTTCGCATTTCTTACTTATACGCCGACT‑GGGGAACACCAACCGCGCGACCAGACGGATCGTCCATTTTc                                                               <  2:677055/149‑1 (MQ=255)                                                                                       ccGGAACATTTCCTTACTGCATATCAGAATCAACAAGCACCTCAATAACTGAAACAGCCCCGGATTTCACCGGGGCTGTTTCGCATTTCTTACTTATACGCCGACT‑GGTGAACACCAACCGCGCGACCAGACGGATCGTCCATTTTCtt                                                             >  2:719753/1‑149 (MQ=255)                                                                                       ccGGAACATTTCCTTACTGCATATCAGAATCAACAAGCACCTCAATAACTGAAACAGCCCCGGATTTCACCGGGGCTGTTTCGCATTTCTTACTTATACGCCGACT‑GGTGAACACCAACCGCGCGACCAGACGGATCGTCCATTTTCtt                                                             <  2:303145/149‑1 (MQ=255)                                                                                       ccGGAACATTTCCTTACTGCATATCAGAATCAACAAGCACCTCAATAACTGAAACAGCCCCGGATTTCACCGGGGCTGTTTCGCATTGCTTACTCA‑ACAAATGCTGGGTGAACACCAACCGCGCGACCAGACGGATCGTCCATTTTCtt                                                             <  1:183696/149‑1 (MQ=255)                                                                                                 tCCTTACTGCATATCAGAATCAACAAGCACCTCAATAACTGAAACAGCCCCGGATTTCACCGGGGCTGTTTCGCATTTCTTACTTATACGCCGACT‑GGTGAACACCAACCGCGCGACCAGACGGATCGTCCATTTTCTTGAACGCTTCa                                                   <  1:719753/149‑1 (MQ=255)                                                                                                  ccTTACTGCATATTTGAATCAACAGGCAACTCAATAGCTGAACCCGCCCCGGATTTCACCGGGGCTGTTTCGCATTTCTTACTTATACGCCGACT‑GGATAACACCAACCGCGCGACCAGACGGATCGTCCATTTTCTTGAACGCTTAAt                                                  <  2:760497/149‑1 (MQ=255)                                                                                                             atCAGAATCAACAAGCACGTCAAGAACTGAAACAGCCCCGGATTTCACCGGGGCTGTTTCGCATTTCTTACTTATACGGCGACT‑GGTGAACACCAAACGCGCGACCAGACGGATCGTCCATTTTGTTGAACGCTTCATCCCATTCGATc                                       >  1:711419/1‑149 (MQ=255)                                                                                                                  aaTCAACAAGCACCTCAATAACTGAAACAGCCCCGGATTTCACCGGGGCTGTTTCGCATTTCTTACTTATACGCCGACT‑GGTGAACACCAACCGCGCGACCAGACGGATCGTCCATTTTCTTGAAAGCTTCATCCCATTCGATCGGttt                                  >  1:90333/1‑149 (MQ=255)                                                                                                                        caaGCACCTCAATAACTGAAACAGCCCCGGATTTCACCGGGGCTGTTTCGCATTTCTTACTTATACGCCGACT‑GGTGAACACCAACCGCGCGACCAGACGGATCGTCCATTTTCTTGAACGCTTCATCCCATTCGATCGCTTTAGCGga                            <  1:562358/149‑1 (MQ=255)                                                                                                                         aaGCACCTCAATAACTGAAACAGCCCCGGATTTCACCGGGGCTGTTTCGCATTTCTTACTTATACGCCGACT‑GGTGAACACCAACCGCGCGACCAGACGGATCGTCCATTTTCTTGAACGCTTCATCCCATTCGATCGCTTTGGCGgaa                           >  1:105370/1‑149 (MQ=255)                                                                                                                         aaGCACCTCAATAACTGAAACAGCCCCGGATTTCACCGGGGCTGTTTCGCATTTCTTACTTATACGCCGACT‑GGTGAACACCAACCGCGCGACCAGACGGATCGTCCATTTTCTTGAACGCTTCATCCCATTCGATCGCTTTAGCGgaa                           >  2:35690/1‑149 (MQ=255)                                                                                                                             aCCTCAATAACTGAAACAGCCCCGGATTTCACCGGGGCTGTTTCGCATTTCTTACTTATACGCCGACT‑GGTGAACACCAACCGCGCGACCAGACGGATCGTCCATTTTCTTGAACGCTTCATCCCATTCGATCGCTTTAGCGGAAGAAc                       <  1:504389/149‑1 (MQ=255)                                                                                                                             aCCTCAATAACTGAAACAGCCCCGGATTTCACCGGGGCTGTTTCGCATTTCTTACTTATACGCCGACT‑GGTGAACACCAACCGCGCGACCAGACGGATCGTCCATTTTCTTGAACGCTCAATCCCATCCGATCGCTTCAGCgtacgcac                       >  2:762433/1‑142 (MQ=255)                                                                                                                              ccTCAATAACTGAAACAGCCCCGGATTTCACCGCGGCTGTTTCGCATTTCTTACTTATACGCCGACT‑GGTGAACACCAACCGCGCGACCAGACGGATCGTCCATTTTCTTGAACGCTTCATCCCATTCGATCGCTTTAGCGGAAGAACa                      <  1:165067/149‑1 (MQ=255)                                                                                                                                    tAACTGAAACAGCCCCGGATTTCACCGGGGCTGTTTCGCATTTCTTACTTATACGCCGACT‑GGTGAACACCAACCGCGCGACCAGACGGATCGTCCATTTTCTTGACCGCTTCAGCCCATGCGATCGCTTTAGCGGAAGAACAAGCgcc                >  1:143748/1‑147 (MQ=255)                                                                                                                                    tAACTGAAACAGCCCCGGATTTCACCGGGGCTGTTTCGCATTTCTTACTTATACGCCGACT‑GGTGAACACCAACCGCGCGACCAGACGGATCGTCCATTTTCTTGAACGCTTCATCCCATTCGATCGCTTTAGCGGAAGAACAAGCGAc                <  1:35690/149‑1 (MQ=255)                                                                                                                                        tGAAACAGCCCCGGATTTCACCGGGGCTGTTTCGCATTTCTTACTTATACGCCGACT‑GGTGAACACCAACCGCGCGACCAGACGGATCGTCCATTTTCTTGAACGCTTCATCCCATTCGATCGCTTTAGCGGAAGAACAAGCGGCGGaa            >  1:50481/1‑149 (MQ=255)                                                                                                                                                  ccGGATTTCACCGGGGCTGTTTCGCATTTCTTACTTATACGCCGACT‑AATGAATATTAACCGCGCGACCAGACGGATCGTCCATTTTCTTGAACGCTTCATCCCATTCGATCGCTTTAGCGGAAGAACAAGCGACGGAAGGACCGCCCg  >  1:728903/1‑149 (MQ=255)                                                                                                                                                     |                                                                                                                                                   ATTCGGAATTTAACAATAGTGGTGGGAAATTAATCTATGAAATACTGGCCTACAGTGATGAGTTGTCAAACAGTGATGTGGCAAACCCGGAACATTTCCTTACTGCATATCAGAATCAACAAGCACCTCAATAACTGAAACAGCCCCGGATTTCACCGGGGCTGTTTCGCATTTCTTACTTATACGCCGACT‑GGTGAACACCAACCGCGCGACCAGACGGATCGTCCATTTTCTTGAACGCTTCATCCCATTCGATCGCTTTAGCGGAAGAACAAGCGACGGAAGGACCGCCCG  >  NC_000913_3_bme_pgi/697338‑697631

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.