New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913_3_bme_pgi 1207790 =7 (0.230)32 (1.190) 30/256 0.1 85.1% coding (290/630 nt) stfP e14 prophage; uncharacterized protein
?NC_000913_3_bme_pgi 1209619 = 5 (0.190)pseudogene (1/501 nt) stfE pseudogene, e14 prophage; side tail fiber protein fragment family;Phage or Prophage Related

GCAGCGTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCA‑AAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTG  >  NC_000913_3_bme_pgi/1207643‑1207936
                                                                                                                                                   |                                                                                                                                                   
gCAGCGTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTT                                                                                                                                                    <  1:520531‑M1/149‑1 (MQ=255)
 cAGCGTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTG                                                                                                                                                   <  2:256985‑M1/149‑1 (MQ=255)
      tggtggAGGCCTCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGGTGTTAAGCCGCAAGAATCAGTTTGCCGATATCAAAGCGGATGGGACAGTGCAAAAGGCTCTCGGAAACCTTGagata                                                                                                                                              >  1:227470‑M1/1‑144 (MQ=255)
      tggtggAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGGTTG                                                                                                                                              >  1:153168‑M1/1‑149 (MQ=255)
      tgcacagttcagcgcattacgttgtagatctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTg                                                                                                                                              >  1:36578‑M1/142‑149 (MQ=255)
       tagggaggCTACCGCTGCCAGCCTGGGGAAGGGGCGGCACGACCAGTAACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGG                                                                                                                                             <  2:180989‑M1/146‑1 (MQ=255)
       ggtggAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCGGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGAAAGAATCCGTTTGGCGATATCAAATCGTATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGG                                                                                                                                             <  1:211119‑M1/149‑1 (MQ=255)
       gcacagttccacgccttacgctggggtgctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTgg                                                                                                                                             >  1:255460‑M1/141‑149 (MQ=255)
        gtggAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGG                                                                                                                                            >  1:392605‑M1/1‑149 (MQ=255)
         acagttcagcgcattacgttgtagatctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGga                                                                                                                                           <  1:447608‑M1/11‑1 (MQ=255)
                       ggctgcctgGGGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGC‑AACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcatta                                                                                                                            <  2:243916‑M1/145‑11 (MQ=255)
                          gttgtagatctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCA‑AAACTCaa                                                                                                                         >  2:271094‑M1/122‑149 (MQ=255)
                          gttgtagagctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCA‑AAACTCaa                                                                                                                         >  2:457435‑M1/122‑149 (MQ=255)
                           ttgtagatctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGTAGCA‑AAACTCAAt                                                                                                                        <  2:303224‑M1/29‑1 (MQ=255)
                            ccTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCA‑AAACTCAATg                                                                                                                       >  1:383715/1‑149 (MQ=255)
                              tGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgtt                                                                                                                      >  1:461920‑M1/1‑133 (MQ=255)
                               ggAGAAGGGGCGGCACGCGCAGTTACTTTCCGCACTTCGCGCGCTGCTGTGAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttg                                                                                                                     <  2:163917‑M1/149‑18 (MQ=255)
                               ggAGAAGGGGCGGCACGACCAGTTAATTACCGCACTTCGCGCGATGCTGTTAAGCCGCAAGAATCCGTTCGGCGATATCAAATCGGATGGCACTGTGCAAAGGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttg                                                                                                                     >  1:409440‑M1/1‑132 (MQ=255)
                                      gggCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtccc                                                                                                              >  1:461318‑M1/1‑125 (MQ=255)
                                      gggCGACACGACCAGTCACTTACCGCACGTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCA‑AAACTCAATGCAGCAACGGc                                                                                                             <  2:438246/149‑1 (MQ=255)
                                        ttcttgttgtttgctgagacgcgtacatagccaataagcacgttaaatccccctgggaaaagcacgaatgatgccatttgcttgttatttcgtcattttcataaactTTTGTTTGGGAGAAGGAGCA‑AAACTCAATGCAGCAACGGCTa                                                                                                           >  2:95501‑M1/108‑149 (MQ=255)
                                            caccacCAGTTACTTACCTCAGTTCGCGCGCTGCTGTTAAGCCGCAAGAAACCGTTTGGCGATATCATATCGGATGTCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCA‑AAACTCAATGCAGCAACGGCTACAtt                                                                                                       <  1:235821/149‑1 (MQ=21)
                                              tcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGa                                                                                                                                     <  2:290889‑M1/17‑1 (MQ=255)
                                              tcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGa                                                                                                                                     >  1:290889‑M1/102‑118 (MQ=255)
                                               gACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAGTCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattgcatgttggtgtcccggttccgtg                                                                                                     >  2:270149‑M1/1‑116 (MQ=255)
                                                atttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGAAGCA‑AAAATCAATCCAGCAACGGCTACATTAGGa                                                                                                   <  2:403475‑M1/50‑1 (MQ=255)
                                                    gttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCA‑AAACTCAATGCAGCAACGTCTACATTAGGACGCa                                                                                               <  1:231745‑M1/54‑1 (MQ=255)
                                                     ttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCA‑AAACTCAATGCAGCAACGGCTACATTAGGACGCAc                                                                                              >  1:436683‑M1/95‑149 (MQ=255)
                                                     ttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgattgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCA‑AAACTCAATGCAGCAACGGCTACCTTTGGACGCAc                                                                                              <  2:437858‑M1/55‑1 (MQ=255)
                                                     ttacttacCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAATCCTTGGATTGGGAAAAGGctctgcagtacctgttggtgacccgattccgaggccttc                                                                                               >  1:114380‑M1/1‑110 (MQ=255)
                                                       gatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttagttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCA‑AAACTCAATGCAGCAACGGCTACATTAGGACGCACCg                                                                                            <  1:343479‑M1/57‑1 (MQ=255)
                                                              gCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcactacctgttggtgtcccggttccgtggccttcagccactcc                                                                                      >  2:495437‑M1/1‑101 (MQ=255)
                                                               tacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCA‑AAACTCAATGCAGCAACGGCTACATTAGGCGGCACCGGTTCCATa                                                                                    <  2:72569‑M1/65‑1 (MQ=255)
                                                                aactagccaatactcatgttaaccgcctctggtaaaatcagggatgatgccatttgctggttatttcttcattttcataaacgTTGGTTTGTGAGAAGGAGCA‑AAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAg                                                                                   >  2:146193‑M1/84‑149 (MQ=255)
                                                                  atagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCA‑AAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCt                                                                                 >  1:67900‑M1/82‑149 (MQ=255)
                                                                      cgcgcTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaccag                                                                              >  1:217217‑M1/1‑93 (MQ=255)
                                                                      cgcgcTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactcagccaacag                                                                              >  1:217322‑M1/1‑93 (MQ=255)
                                                                      ccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCA‑AAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTCCATAGCCATAc                                                                             <  2:57727‑M1/72‑1 (MQ=255)
                                                                       caataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCA‑AAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATAcc                                                                            <  1:463057‑M1/73‑1 (MQ=255)
                                                                           tgctgTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATAGGATGGCACTGTGCAAAAGGCTCTCGAAAACCTTGGTTTTGGAGAACGctctgcattgcatggtggtgtcccggttcgttggacttaagccactgcgccaacaggcgtg                                                                         >  1:139557‑M1/1‑88 (MQ=255)
                                                                            agcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCA‑AAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTa                                                                       >  1:48682‑M1/72‑149 (MQ=255)
                                                                               atgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgGTGGTGTGGGAGAAGGAGCA‑AAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCCTAGCTATACCGGTTATGa                                                                    <  2:30273‑M1/81‑1 (MQ=255)
                                                                                 caaGCCGCAAGATTCCGTTTGGCGAAATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGGTTGGGAGAAGGAGCA‑AACCTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGAtt                                                                  <  1:498829/148‑1 (MQ=255)
                                                                                  ttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCA‑AAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTAGGATtg                                                                 <  1:17191‑M1/84‑1 (MQ=255)
                                                                                        ccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCA‑AAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTa                                                           >  1:31421‑M1/60‑149 (MQ=255)
                                                                                          ccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCA‑AAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTAtt                                                         <  1:424914‑M1/92‑1 (MQ=255)
                                                                                          aGAATCCTTTTAGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggt                                                          <  1:106743‑M1/149‑77 (MQ=255)
                                                                                           cctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCA‑AAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTg                                                        <  1:115934‑M1/93‑1 (MQ=255)
                                                                                                      gCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcgatggtgccgctttttct                                              >  1:302307‑M1/1‑61 (MQ=255)
                                                                                                      gCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttct                                              >  1:365299‑M1/1‑61 (MQ=255)
                                                                                                      caggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCA‑AAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAAACAGTa                                             <  1:21258‑M1/104‑1 (MQ=255)
                                                                                                        ggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCA‑AAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGttt                                                                                        >  2:36848‑M1/44‑104 (MQ=255)
                                                                                                        ggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCA‑AAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGttt                                                                                        <  1:36848‑M1/61‑1 (MQ=255)
                                                                                                            agatgccatttgcttgttctttcttcagtttcataaacgTTGGTTTGGGAGAAGGAGCA‑AAACTCAATGCAGCAACGGCTACAGTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCAtt                                       >  1:231506‑M1/40‑149 (MQ=255)
                                                                                                                 ccatttgcttgttatttcttgattatcataaacgTTGGTTTGGGAGAAGGAGCA‑AAACTCAATGCAGCAACGGCTACATTAGGACGCACCGTTTTCATAGCTATACCGGTTATGATGGGTGGTATTGAGCAATCAGTAATCATTCAGTg                                  >  2:62481‑M1/35‑149 (MQ=255)
                                                                                                                  catttgcttgttatttcttcattttcataaacgTTGGTTTGGGGGAAGGAGCA‑AAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACAGGTTATAATTGGTGGAATTGAGCACTCAGTAATCATTCAGtga                                 <  2:456042‑M1/116‑2 (MQ=255)
                                                                                                                  catttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCA‑AAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTgg                                 <  1:317118‑M1/116‑1 (MQ=255)
                                                                                                                    gATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTAGGGAGAAGGctctgcattacctgttggtgtcctggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaataccc                                <  1:495689‑M1/149‑103 (MQ=255)
                                                                                                                      tgggagtgtgGAAACGGCTCGCGAAAACCTTGGTTTGGGAGAAGGAGCA‑AAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGt                             <  2:234167/143‑1 (MQ=255)
                                                                                                                         ttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCA‑AAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGa                          <  1:468212‑M1/123‑1 (MQ=255)
                                                                                                                          aCTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaact                          >  1:22232‑M1/1‑41 (MQ=255)
                                                                                                                                    tcatttttaaaaacgGTGGGTTGGGAGAAGGAGTA‑AAACTCAATGCAGCAAGGGCTACATTAGGACGCACCTGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCaaaa               >  2:229503‑M1/16‑149 (MQ=255)
                                                                                                                                        tctcGAAAACCTTGGTTTGGGAGAAGGAGCAGAAAAATTAT‑CAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCAt           >  1:398555/1‑149 (MQ=255)
                                                                                                                                         ctcGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggtttcgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagactacccggaactggcaaaggcttatcc           <  2:409440‑M1/149‑124 (MQ=255)
                                                                                                                                          tcGAAAACCTTGGTTTGGGAGAAGGAGCA‑AAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACAGGTTTTTTAATTTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCt         >  1:258523/1‑149 (MQ=255)
                                                                                                                                             taaacgTTGGTTTGGGAGAAGGAGCA‑AAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGAGCTGGAATGCCGCAAAAGCATCTGcc      <  2:460713‑M1/143‑1 (MQ=255)
                                                                                                                                                  cTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggcttatccgacaaataa  >  1:392651‑M1/1‑17 (MQ=255)
                                                                                                                                                  cTTGGTTTGGGAGAAGGctctgcattacctgttggtgtaccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggcttatccgacaaataa  >  2:470310‑M1/1‑17 (MQ=255)
                                                                                                                                                   |                                                                                                                                                   
GCAGCGTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCA‑AAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTG  >  NC_000913_3_bme_pgi/1207643‑1207936

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.