New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913_3_hsa_pgi = 42293861134 (16.880)28 (0.440) 17/266 3.6 2.5% noncoding (11/70 nt) REP312 (repetitive extragenic palindromic) element; contains 2 REP sequences REP312 (repetitive extragenic palindromic) element; contains 2 REP sequences
?NC_000913_3_hsa_pgi = 4229405 NA (NA)noncoding (30/70 nt) REP312 (repetitive extragenic palindromic) element; contains 2 REP sequences REP312 (repetitive extragenic palindromic) element; contains 2 REP sequences
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 1165 total aligned reads displayed.

TTTAGGCTTACTGGGAGATATGCAGCGCCTGAACTCGCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGG‑TGACCAGCTTCCAGCGGAACCGCTTCTTCACCAGCCTTAAACACATAAGTGGTGTTCGGGCCACCCAGCGTAGCGTGACCTTTACTCACTGT  >  NC_000913_3_hsa_pgi/4229257‑4229554
                                                                                                                                                    |                                                                                                                                                       
tttAGGCTTACTGGGAGATATGCAGCGCCTGAACTCGTTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCa                                                                                                                                                        <  1:297469/150‑1 (MQ=255)
   aGGCTTACTGGGAGATATGCAGCGTCTGAACTCGCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCa                                                                                                                                                     <  2:631730/150‑1 (MQ=255)
   aGGCTTACTGGGAGATATGCAGCGCCTGAACTCGCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCa                                                                                                                                                     <  2:358486/150‑1 (MQ=255)
    ggCTTACTGGGAGATATGCAGCGCCTGAACTCGCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAg                                                                                                                                                    <  1:401819/150‑1 (MQ=255)
       ttACTGGGATATCTGCAGCGCCTGAACTCGCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCa                                                                                                                                                 <  1:56708/150‑1 (MQ=255)
       ttACTGGGAGATATGCAGCGCCTGAACTCGCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCa                                                                                                                                                 >  2:912698/1‑150 (MQ=255)
           tGGGAGATATGCAGCGCCTGAACTCGCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATGAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATc                                                                                                                                                      <  1:1042806/141‑1 (MQ=255)
              gagaTATGCAGCGCCTGAACTCGCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGaa                                                                                                                                          <  1:1112486/150‑1 (MQ=255)
                  tatGCAGCGCCTGAACTCGCTGTTTTGTTCGGCAATTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAg                                                                                                                                      >  2:852682/1‑150 (MQ=255)
                       aGCGCCTGAACTCGCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGcc                                                                                                                                 >  1:648946/1‑150 (MQ=255)
                       aGCGCCTGAACTCGCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGcc                                                                                                                                 >  1:924935/1‑150 (MQ=255)
                       aGCGCCTGAACTCGCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGcc                                                                                                                                 >  2:1159821/1‑150 (MQ=255)
                       aGCGACTGAACTCGCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAATAGGTGGATGAAGATGAAGGAGGGGTCGGGTATTAATATTGTGCGTCCGTTGGGCTTGATAAGACGGGTCAAGTGTATCGTTAGGGACTATGAACTAGATggc                                                                                                                                 >  2:547030/1‑148 (MQ=255)
                          ggcTGAACTCGCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGa                                                                                                                              <  2:1054613/148‑1 (MQ=255)
                          gcCTGAACTCGCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGa                                                                                                                              <  1:667117/150‑1 (MQ=255)
                            cTGAACTCGCTGTTTTGTTAGGTGGCTTACAGTGTGCTGGACCCGTCGGCTGCGTGGCGAGGACAGGACGAGTATTACTATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑c                                                                                                                           <  2:1135320/150‑1 (MQ=25)
                             tGAACTCGCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACCAGATGCCGGAT‑Ca                                                                                                                          >  2:445685/1‑150 (MQ=255)
                             tGAACTCGCTGTTTAGTTCGGTGGGTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑Ca                                                                                                                          >  1:1024978/1‑150 (MQ=255)
                              gAACTCGGGGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CAt                                                                                                                         <  1:429402/150‑1 (MQ=255)
                              gAACTCGCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CAt                                                                                                                         <  2:871840/150‑1 (MQ=255)
                              gAACTCGCGGGTTTGTGCGGTGGCTTACAGTGTGCCGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CAt                                                                                                                         <  1:48823/150‑1 (MQ=255)
                                  tCGCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CAt                                                                                                                         >  2:604454/1‑146 (MQ=255)
                                  tCGCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCAt                                                                                                                     >  1:690278/1‑150 (MQ=255)
                                  gcGCTGTGTTGTTCGGGGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCAt                                                                                                                     <  2:649678/149‑1 (MQ=255)
                                    gCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATcc                                                                                                                   >  2:155982/1‑150 (MQ=255)
                                      tGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGACAAGCGTCGCATCAGGCACTATGAACCAGATGACGGAG‑CCTCCCTCCgg                                                                                                                 >  1:742916/1‑150 (MQ=38)
                                       gTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATGCATG‑ATCCGGc                                                                                                                <  1:38233/150‑1 (MQ=255)
                                       gTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGc                                                                                                                >  1:446350/1‑150 (MQ=255)
                                        ttttGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCa                                                                                                               >  2:309520/1‑150 (MQ=255)
                                         tttGTTCGGTGGCTTACTGTGTGCTGGAATAGCCGGATGAAGATGAAGGACGGGATGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAACCGTCGCATCAGGCACTATGAACAAGATGCCGGATGCATG‑ATCCGGCat                                                                                                              <  1:611476/150‑2 (MQ=38)
                                          ttGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATg                                                                                                                        >  1:510624/1‑139 (MQ=255)
                                          ttGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCgg                                                                                                                 <  2:981161/146‑1 (MQ=255)
                                           tGTTCGGTGGCTTACAGGGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAAtt                                                                                                            <  1:318868/150‑1 (MQ=255)
                                            gTTCGGTGGCTTACAGGGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAAGCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATGCATG‑ATCCGGCatctt                                                                                                           <  2:196054/150‑5 (MQ=38)
                                                  tGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTaa                                                                                                     >  2:753028/1‑150 (MQ=255)
                                                  tGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTaa                                                                                                     >  1:1130573/1‑150 (MQ=255)
                                                         cAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGG‑t                                                                                             <  1:470388/150‑1 (MQ=255)
                                                         aaGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGG‑t                                                                                             <  2:577167/149‑1 (MQ=255)
                                                            tgtgCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGG‑t                                                                                             >  2:933395/1‑147 (MQ=255)
                                                               gCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGG‑TGACCAg                                                                                       >  1:1141631/1‑150 (MQ=255)
                                                                cTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGG‑TGACCAGc                                                                                      >  1:792938/1‑150 (MQ=255)
                                                                cTGGAACAGCCGGATGAAGATGAAGGAAGGGACGAGTATTAATATTCTGAATCCTGTAGGCCTTATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGG‑TGACCAGc                                                                                      <  1:858375/150‑1 (MQ=255)
                                                                        gCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGG‑TGACCAGCTTCCAGCg                                                                              >  1:954747/1‑150 (MQ=255)
                                                                           ggATGAAGATGAAGGACGGGACGAGTATTAATACTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGG‑TGACCAGCTTCCAGCGGaa                                                                           <  1:845/150‑1 (MQ=255)
                                                                             gtgaagatgaagGGCGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTACTAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGG‑TGACCAGCTTCCAGCGGAAcc                                                                         <  1:226912/149‑1 (MQ=255)
                                                                               gaagatgaagGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCCACAATACGATTAAAAACGG‑TGACCAGCTTCCAGCGGAACCGc                                                                       >  1:627180/1‑150 (MQ=38)
                                                                                 agatgaagGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCAt                                                                                                                                                       >  2:487214/1‑70 (MQ=255)
                                                                                 agatgaagGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGG‑TGACCAGCTTCCAGCGGAACCGctt                                                                     <  2:1086215/150‑1 (MQ=255)
                                                                                  gatgaagGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGG‑TGACCAGCTTCCAGCGGAACCGcttc                                                                    >  1:1063287/1‑150 (MQ=255)
                                                                                    tgaagGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTa                                                                                                                                              <  1:171542/76‑1 (MQ=255)
                                                                                     gaagGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGG‑TGACCCGCTTCCAGCGGAACCGCttcttc                                                                 >  2:264114/1‑150 (MQ=255)
                                                                                     gaagGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGG‑TGACCAGCTTCCAGCGGAACCGCttcttc                                                                 <  2:83048/150‑1 (MQ=255)
                                                                                     gaagGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCCGATAAGACGCGTCAAGCGCCGCCTCAGGAAATATGAACAACATGCCGGAT‑CCTGCATCCGGCAATTCACCTAAAAACGC‑TAACCCGCCTCCAGCGGACCCCCttcttc                                                                 >  1:244829/1‑150 (MQ=255)
                                                                                       agGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGG‑TGACCAGCTTCCAGCGGAACCGCTTCTTCAc                                                               <  2:288630/150‑1 (MQ=255)
                                                                                        ggacgggacgAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCCCCAAGCGCCGCATCAGGCACTATGAACAAGAAGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGG‑TAACCAGCTTCAAGCGGAACCGCTTCTTCAcc                                                              >  2:1022391/1‑150 (MQ=39)
                                                                                         gacgggacgAGTATTAATGTTGTAAATCCTGTAGGCCTGATAAGACGCGTCAAGCATCGCATCAGGCACTATGAACAATATGCCGGAT‑CATGCATCAGGCAATTCACTTAACAACGG‑TGACCAGATTCCAGTGGAACCGCTTCTTCAccg                                                             >  1:1090003/1‑149 (MQ=38)
                                                                                           cgggacgAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGG‑TGACCAGCTTCCAGCGGAACCGCTTCTTCACCAGc                                                           <  1:804163/150‑1 (MQ=255)
                                                                                            gggacgAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑c                                                                                                                           <  1:162474/86‑1 (MQ=255)
                                                                                                 gAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGG‑TGACCAGCTTCCAGCGGAACCGCTTCTTCACCAGCCTTaaa                                                     <  1:990396/150‑1 (MQ=255)
                                                                                                 gAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGG‑TGACCAGCTTCCAGCGGAACCGCTTCTTCACCAGCCTTaaa                                                     <  1:1180279/150‑1 (MQ=255)
                                                                                                    tATTACTATTGTGAATCCTGTAGGCCTGAAAAGACGCGACAAGCGTCGCCGCAGGCATTATAAACAGGGTTCCGGAT‑CATGCATCCCGCAATTCACTTAAAACTGA‑TGACCAGCTTCCAGCGGACGCGCTTACTCACCAGCCTTTAacac                                                  >  1:1001026/1‑150 (MQ=255)
                                                                                                    tATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGG‑TGACCAGCTTCCAGCGGAACCGCTTCTTCACCAGCCTTaaa                                                     >  2:957211/1‑147 (MQ=255)
                                                                                                     aTTAATATTGTGAATCCTGTAGGCCTGCTACGACCAGCGAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGG‑TGACCAGCTTCCAGCGGAACCGCTTCTTCACCAGCCTTAAAcaca                                                 >  1:286541/1‑150 (MQ=255)
                                                                                                      ttAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAATATGCCTGAT‑CATGCATCCGGCAATTCACTTAAAAACGG‑TGACCAGCTTCCAGCGGAACCGCTTCTTCACCAGCCTTAAACACAt                                                <  2:430974/150‑1 (MQ=255)
                                                                                                      ttAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCAc                                                                                                         <  1:331957/94‑1 (MQ=255)
                                                                                                      ttAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGG‑TGACCAGCTTCCAGCGGAACCGCTTCTTCACCAGCCTTa                                                       >  2:412445/1‑143 (MQ=255)
                                                                                                        aaTATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGG‑t                                                                                             >  2:72201/1‑103 (MQ=255)
                                                                                                         atatTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGG‑TGACCAGCTTCCAGCGGAACCGCTTCTTCACCAGCCTTAAACACATAAg                                             >  1:18909/1‑150 (MQ=255)
                                                                                                          tatTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGG‑TGACCAGCTTCCAGCGGAACCGCTTCTTCACCAGCCTTAAACACATAAgt                                            >  1:133166/1‑150 (MQ=255)
                                                                                                            ttGTGCAACCTGTAGGCCTGATAATACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAATCGG‑TGACCAGATTCCAGCTGAACCGCTTCTTCACCAGCCTTAAACACATAAgtgg                                          <  1:704173/150‑1 (MQ=38)
                                                                                                            ttGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGG‑TGACCAGCTTCCAGCGGaa                                                                           >  1:536362/1‑117 (MQ=255)
                                                                                                              gtgAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGG‑TGACCAGCTTCCAGCGGAACCGCTTCTTCACCAGCCTTAAACACATAAgtggtg                                        >  1:910276/1‑150 (MQ=255)
                                                                                                               tgAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGG‑TGACCa                                                                                        >  1:204756/1‑101 (MQ=255)
                                                                                                               tgAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGG‑TGACCAGCTTCCa                                                                                 >  2:336562/1‑108 (MQ=255)
                                                                                                               tgAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGG‑TGACCAGCTTCCAGCGGAACCGCTTCTTCACCAGCCTTAAACACATAAGTGgtgt                                       >  2:562707/1‑150 (MQ=255)
                                                                                                                   tCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGG‑TGACCAGCTTCCAGCGGAACCGCTTCTTCACCAGCCTTAAACCCATAAGTGGTGTTCgg                                   >  1:72883/1‑150 (MQ=255)
                                                                                                                   tCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGG‑TGACCAGCTTCCAGCGGAACCGCTTCTTCACCAGCCTTAAACACATAAGTGGTGTTCgg                                   <  1:268004/150‑1 (MQ=255)
                                                                                                                   tCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGG‑TGACCAGCTTCCAGCGGAACCGCTTCTTCACCAGCCTTAAACACATAAGTGGTGTTCgg                                   <  2:114438/150‑1 (MQ=255)
                                                                                                                     cTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGG‑TGACCAGCTTCCAGCGGAACCGCTTCTTCACCAGCCTTAAACACATAAGTGGTGTTCGGGc                                 >  2:696227/1‑150 (MQ=255)
                                                                                                                       gTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGAAGGAT‑CATGAAACCGGCAA‑TAACAAGCATATGGATGACCAGCTTCCACCGGGACCTCTTCATCACCAGCCGTAAACACAAAAGTAGGGGTCGGGccc                               >  1:875554/1‑149 (MQ=16)
                                                                                                                               gATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGG‑TGACCAGCTTCCAGCGGAACCGCTTCTTCACCAGCCTTAAACACATAAGTGGTGTTCGGGCCACCCagcgt                       >  2:801221/1‑150 (MQ=255)
                                                                                                                                aTAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGG‑TGACCAGCTTCCAGCGGAACCGCTTCTTCACCAg                                                            >  1:7783/1‑112 (MQ=255)
                                                                                                                                aTAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGG‑TGACCAGCTTCCAGCGGAACCGCTTCTTCACCAGCCTTAAACACATAAGTGGTGTTCGGGCCCCCCaccgta                      >  2:221124/1‑150 (MQ=255)
                                                                                                                                aTAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGG‑TGACCAGCTTCCAGCGGAACCGCTTCTTCACCAGCCTTAAACACATAAGTGGTGTTCGGGCCACCCagcgta                      <  2:465407/150‑1 (MQ=255)
                                                                                                                                aTAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGG‑TGACCAGCTTCCAGCGGAACCGCTTCTTCACCAGCCTTAAACACATAAGTGGTGTTCGGGCCACCCagcgta                      <  2:393453/150‑1 (MQ=255)
                                                                                                                                 tAAGACGCGTCAAGCGTCGCATCAGGCACTATGAAGAAGATGCCGGATGCATG‑ATCCGGCatc                                                                                                             >  2:1036818/1‑61 (MQ=18)
                                                                                                                                     aCGCGTCAAGCGTGGAAACAGGAACTATGAACAAGATGCCGGAT‑CATGCAACCGGCAATTCACTTAAAAACGG‑TTACCAGCTTCCAGCAGAACCGCTTCTTCACCAGGCTTAAACACGTGAGTGGTGTCCGGGCCACCCTGCGTAGCATg                 >  1:970859/1‑150 (MQ=255)
                                                                                                                                     aCGCGTCAAGCGTCGCATCAGGCACTATGAAGAGCTGGGCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGG‑TGACCAGCTTCCAGCGGAACCGCTTCTTCACCAGCCTTAAACACATAAGTGGTGTTCGGGCCACCCAGCGTAGCGTg                 >  1:587798/1‑150 (MQ=255)
                                                                                                                                     aCGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGG‑TGACCa                                                                                        <  2:165920/79‑1 (MQ=255)
                                                                                                                                     aCGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATACACTTAAAAACGG‑TGACCAGCTTCGAGCGGAACCGCTTCTTCACCAGCCTTACACACATAAGTGGTGTTCGGCCCACCCAGCGTAGCGTg                 >  2:119064/1‑150 (MQ=255)
                                                                                                                                        cgTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGG‑TGACCAGCTTCCAGCGGAACCGCTTCTTCACCAGCCTTAAaca                                                   >  1:556530/1‑113 (MQ=255)
                                                                                                                                         gTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGG‑TGACCAGCTTCCAGCGGAACCGCTTCTTCACCAGCCTTAAACACATAAGTGGTGTTCGGGCCACCCAGCGTAGCGTGACCt             >  2:508801/1‑150 (MQ=255)
                                                                                                                                            aaGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGG‑TGACCAGCTTCCAGCGGAACCGCTTCTTCACCAGCCTTAAACACATAAGTGGTGTTCGGGCCACCCAGCGTAGCGTGACCTTTa          <  1:758309/150‑1 (MQ=255)
                                                                                                                                            aaGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGG‑TGACCAGCTTCCAGCGGAACCGCTTCTTCACCAGCCTTAAACACATAAGTGGTGTTCGGGCCACCCAGCGTAGCGTGACCTTTa          <  2:244036/150‑1 (MQ=255)
                                                                                                                                            aaGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACCT‑GGACCAGCTTCCAGCGGAACCGCTTCTTCACCAGCCTTAAACACATAAGTGGTGTTCGGGCCACCCAGCGTAGCGTGACCTTTa          <  1:1159821/150‑1 (MQ=255)
                                                                                                                                             aGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGG‑TGACCAGCTTCCAGCGGAACCGCTTCTTCACCAGCCTTAAACACATAAGTGGTGTTCGGGCCACCCAGCGTAGCGTGACCTTTAc         <  2:669947/150‑1 (MQ=255)
                                                                                                                                                   gCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGG‑TGACCAGCTTCCAGCGGAACCGCTTCTTCACCAGCCTTAAACACATAAGTGGTGTTCGGGCCACCCAGCGTAGCGTGACCTTTACTCACtg   >  2:782859/1‑150 (MQ=255)
                                                                                                                                                   gCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGG‑TGACCAGCTTCCAGCGGAACCGCTTCTTCACCAGCCTTAAACACATAAGTGGTGTTCGGGCCACCCAGCGTAGCGTGACCTTTACTCACtg   <  1:34670/150‑1 (MQ=255)
                                                                                                                                                    cATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGG‑TGACCAGCTTc                                                                                   >  1:818529/1‑69 (MQ=255)
                                                                                                                                                    cATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGG‑TGACCAGCTTCCAGCGGAACCGCTTCTTCACCAGCCTTAAACACATAAGTGGTGTTCGGGCCACCCAGCGTATCGTGACCTTTACTCACtgt  >  2:1107356/1‑150 (MQ=255)
                                                                                                                                                    |                                                                                                                                                       
TTTAGGCTTACTGGGAGATATGCAGCGCCTGAACTCGCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGG‑TGACCAGCTTCCAGCGGAACCGCTTCTTCACCAGCCTTAAACACATAAGTGGTGTTCGGGCCACCCAGCGTAGCGTGACCTTTACTCACTGT  >  NC_000913_3_hsa_pgi/4229257‑4229554

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.