New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913_3_hsa_pgi = 4245215NA (NA)3 (0.060) 3/258 NT NA noncoding (96/126 nt) REP315 (repetitive extragenic palindromic) element; contains 3 REP sequences REP315 (repetitive extragenic palindromic) element; contains 3 REP sequences
?NC_000913_3_hsa_pgi = 4245245 NA (NA)noncoding (126/126 nt) REP315 (repetitive extragenic palindromic) element; contains 3 REP sequences REP315 (repetitive extragenic palindromic) element; contains 3 REP sequences

Only 100 of 1357 total aligned reads displayed.

CATCCATGGGGTTCTTCCTCATTCCAGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTGGTGATACGAGTCTGCGCGT‑CTTTCAGGGCTTCATCGACAGTCTGACGACCGCTGGCGGCGTTGATCACCGCAGTACGCACG‑GCATACCAGAAAGCGGACATCTGCGGGATGTTCGGCATGATTTCACCTT  >  NC_000913_3_hsa_pgi/4245097‑4245393
                                                                                                                                                    |                                                                                                                                                      
cATCCATGGGGTTCTTCCTCATTCCAGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGC                                                                                                                                                        <  2:441277‑M2/149‑1 (MQ=255)
    cATGGGGTTCTTCCTCATTCCAGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCGACGCTGAAGCGTCTTATAAGGACTACATACGTTTAGGTTTTGTAGGCCGGACAAGGAGTTAACGCCGCATACGGCAttt                                                                                                                                                    >  1:52950/1‑149 (MQ=39)
      tGGGGTTCTTCCTCATTCCAGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCGACGCTGACGCGTATTATATGAGGCACAAACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTca                                                                                                                                                  >  1:986758/1‑149 (MQ=38)
        gggTTATTCCTTATTCCAGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTcaca                                                                                                                                                <  1:55718/149‑1 (MQ=255)
          gTTCTTCCTCATTCCAGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGc                                                                                                                                              >  2:42367/1‑149 (MQ=255)
           ttcttcCTCATTCCAGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGCTGCGACGCTGACGCGTCTTATCAGGCCTACATCCGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCa                                                                                                                                             <  2:743230/149‑1 (MQ=255)
             cttcCTCATTCCAGGACGGATAAGGCTTTCCCGCCTTATCCGACAACAACTGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCAtt                                                                                                                                           <  2:866815/149‑1 (MQ=255)
              ttcCTCATTCCAGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTa                                                                                                                                          >  1:465240/1‑149 (MQ=255)
                ccTCATTCCAGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACATACGTTTCGCTTTTGTAGGCCGGAAAAGACGTTCACGCCGCATCCGGCGTTTCACAGCATTCCt                                                                                                                                        >  2:338071/1‑149 (MQ=38)
                 cTCATTCCAGGACGGATAAGGCTTTCCAGCCTTATCCGACCACAACTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCAGGACACGGCCTTCACCAGGTGACCGGCATTTCACAGCCTTACtt                                                                                                                                       >  2:959673/1‑149 (MQ=37)
                 cTCATTCCAGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCTTTACtt                                                                                                                                       >  1:804315/1‑149 (MQ=255)
                 cTCATTCCAGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCAAGCCGAATCCGGCATTGCAACACATTACtt                                                                                                                                       >  1:852916/1‑149 (MQ=38)
                 cTCATTCCAGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACATACGTTTAGAGGTGAAAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACtt                                                                                                                                       >  1:231430/1‑149 (MQ=38)
                  tCATTCCAGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGTATTACTTg                                                                                                                                      >  1:519027/1‑149 (MQ=255)
                  tCATTCCAGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGAATCCGACATTTCACAGCCTTACTTg                                                                                                                                      >  1:541221/1‑149 (MQ=255)
                  tCATTCCAGGACGGATAAGGCTTTACCGCCTTATCCGACAACAACTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTg                                                                                                                                      <  2:615989/149‑1 (MQ=255)
                  ccATTCCAGGACGGTTAAGGCTTGCACGCCTTATCCGACAACATCCGCCCGATGCGACGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTg                                                                                                                                      <  1:78790/148‑1 (MQ=38)
                    cttCCAGGACGGATCAGGCTTTCACGACTCTTCCGACAACAAACGCTTGCCGCGCTGCTGCCGCGTATAAAGCGTCGTACCTCCGTCCCTTGTGTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTGGt                                                                                                                                    <  1:740268/148‑1 (MQ=12)
                    aTTCCAGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGCCATTTCACAGCATTACTTGGt                                                                                                                                    >  2:155806/1‑149 (MQ=255)
                      tCCAGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTGGTGa                                                                                                                                  <  1:672592/149‑1 (MQ=255)
                      accAGGACGGATAAGGCTTTCACGAGTTATCCGACAACAACTGCCTGATGCGACGCTGAGGCGTCTTATCAGGCCTACATTCGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTGGTGa                                                                                                                                  <  2:662760/148‑1 (MQ=255)
                        cAGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTAc                                                                                                                                         >  1:892571/1‑140 (MQ=255)
                        cAGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTGGTGATa                                                                                                                                >  1:568694/1‑149 (MQ=255)
                         aGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTGGTGATAc                                                                                                                               >  1:430260/1‑149 (MQ=255)
                         aGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTGGTGATAc                                                                                                                               <  1:377603/149‑1 (MQ=255)
                               gATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTGGTGATACGAGTCt                                                                                                                         >  2:799820/1‑149 (MQ=255)
                                  aaGGCTTTCACGCCTTATCCGACAACCACTGCCTGATGCGACGCTGCCGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTGGTGATACCAGTCTtcg                                                                                                                      >  1:606691/1‑149 (MQ=255)
                                       tttCACGCCTTATCCGACAACAACTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTGGTGATACGAGTCTGCGCGT‑Ct                                                                                                                <  1:924966/149‑1 (MQ=255)
                                          cACGCCTTATCCGACAACAACTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTGGTGATACGAGTCTGCGCGT‑CTTTc                                                                                                             >  2:291107/1‑149 (MQ=255)
                                           atgctttATCCGACAACAACGGCCTGCGGCTCCGTTGCCGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCTGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATCATTTGTTTGTACGAGTCTGCGCGT‑CTTTCa                                                                                                            <  2:367677/144‑1 (MQ=25)
                                           aCGCCTTATCCGACAACAACTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTGGTGATACGAGTCTGCGCGT‑CTTTCa                                                                                                            <  2:830252/149‑1 (MQ=255)
                                           aCGCCTTATCCGACAACAACTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTGGTGATACGAGTCTGCGCGT‑CTTTCa                                                                                                            >  2:856980/1‑149 (MQ=255)
                                            cGCCTTATCCGACAACAACTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTGGTGATACGAGTCTGCGCGT‑CTTTCAg                                                                                                           <  1:640596/149‑1 (MQ=255)
                                            cGCCTTATCCGACAACAACTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTGGTGATACGAGTCTGCGCGT‑CTTTCAg                                                                                                           <  1:963774/149‑1 (MQ=255)
                                             gCCTTATCCGACAACAACTGCCTGATGCGACGCTGACGCGTCTTATCCGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTGGTGATACGAGTCTGCGCGT‑CTTTCAgg                                                                                                          <  1:339402/149‑1 (MQ=255)
                                             gCCTTATCCGACAACAACTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTGGTGATACGAGTCTGCGCGT‑CTTTCAgg                                                                                                          >  2:707269/1‑149 (MQ=255)
                                             gCCTTATCCGACAACAACTGCCTGATGCGACGCTCACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTGGTGATACGAGTCTGCGCGT‑CTTTCAgg                                                                                                          <  2:898403/149‑1 (MQ=255)
                                               cTTATCCGACAACAACTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTGGTGATACGAGTCTGCGCGT‑CTTTCAGGGc                                                                                                        <  1:836241/149‑1 (MQ=255)
                                               cTTACCCGACAAAAACTGCCTGATGCGACGCTGATGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTGGTGATACGAGTCTGCGCGT‑CTTTCAGGGc                                                                                                        <  1:1915/149‑1 (MQ=255)
                                                ttATCCGACGACAGCTGGCTGATGCGACGCTGACGCGTCTTATCAGGCCTACATAAGTTTCGCTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTGGTAATACTAGTCTGCACGT‑CTTTCAGGGCt                                                                                                       <  2:818672/149‑1 (MQ=37)
                                                   tCCGACAACAATTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTGGTGATACGAGTCTGCGCGT‑CTTTCAGGGCTTCa                                                                                                    <  1:143241/149‑1 (MQ=255)
                                                     cGACAACAACTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTGGTGATACGAGTCTGCGCGT‑CTTTCa                                                                                                            <  1:614835/139‑1 (MQ=255)
                                                     cGACAACAACTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTGGTGATACGAGTCTGCGCGT‑CTTTCAGGGCTTCATc                                                                                                  <  1:817786/149‑1 (MQ=255)
                                                     cGACAACAACTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGCTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCAGCATTTCACAGCATTACTTGGTGATACGCGTCTGCGCGT‑CTTTCAGGGCTTCATc                                                                                                  >  2:407835/1‑149 (MQ=255)
                                                       acaacaACTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTGGTGATACGAGTCTGCGCGT‑CTTTCAGGGCCTCATCGa                                                                                                >  2:136587/1‑149 (MQ=255)
                                                              cTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAg                                                                                                                                               <  2:522283/96‑1 (MQ=255)
                                                                gCCTGATGCGACGGTGACGCGTTTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTGGTGATACGAGTCTGCGCGT‑CTTTCAGGGCTTCATCGACAGTCTgac                                                                                       <  1:326790/149‑1 (MQ=255)
                                                                 ccTGATGCGACGCTGACGCGTCTTATCACGCCTACATACGATTCGGTTTTGTCGGCCGGACAAGGCGTTCACGCCGCGTCCGGCCTTTCACCGCATTACTTGGTGCTACGCGCCTGCGCGC‑CTTCCACGCGTTCATCGACAGTCTgccg                                                                                      >  2:836573/1‑149 (MQ=255)
                                                                  cTGATGCGACGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTGGTGATACGAGTCTGCGCGT‑CTTTCAGGGCTTCATCGACAGTCTgacga                                                                                     >  2:1000127/1‑149 (MQ=255)
                                                                  cTGATGCGACGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTGGTGATACGAGTCTGCGCGT‑CTTTCAGGGCTTCATCGACAGTCTgacga                                                                                     >  1:162947/1‑149 (MQ=255)
                                                                  cTGATGCGACGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGACGTTCACGCCGCATCCGGCATTTCACAGCATTACTTGGTGATACGAGTCTGCGCGT‑CTTTCAGGGCTCCCTCTACAGTCTgccgg                                                                                     >  2:19117/1‑148 (MQ=38)
                                                                    gATGCGACGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTGGTGATACGAGTCTGCGCGT‑CTTTCAGGGCTTCATCGACAGTCTGACGAcc                                                                                   <  1:404208/149‑1 (MQ=255)
                                                                       gCGACGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTGGTGATACGAGTCTGCGCGT‑CTTTCAGGGCTTCATCGACAATCTGACCACCGCt                                                                                >  2:307954/1‑149 (MQ=255)
                                                                         gccGCTGACGCGTCTTATCAGGCTTACATACGTTTCGGTTTTGTAGGCCCGACAAGGCGTTCACGCCGCATCCGGCATTCAACAACGTTACTTGGTGATACGAGTCTGCGCGT‑CTTTCAGGGCTTCATCGACCGTCTGACGACCGCTgg                                                                              <  1:30328/147‑1 (MQ=38)
                                                                         gACGCTGATGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTGGTGATACGAGTCTGCGCGT‑CTTTCAGGGCTTCATCGACAGTATGACGACCgaggt                                                                              >  1:705093/1‑145 (MQ=255)
                                                                           cGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTGGTGATACGAGTCTGCGCGT‑CTTTCAGGGCTTCATCGACAGTCTGACGACCGCTg                                                                               >  2:127294/1‑146 (MQ=255)
                                                                               gACGCGTCTTATCAGGCTTATCTACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTGCTTGGTTATACGAGTCTGCGCGT‑CTTTCAGGGCTTCATCGACAGTCTGACGACCGCTGGCGGCGt                                                                        <  1:282388/149‑1 (MQ=39)
                                                                                  gcgGCTTAGCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCAGCCGGCATTTCACAGCATTCCTTGGTGATACGTGTCTGCGCGT‑CTTTCAGGGCTTCATCGACAGGCTGACGACCGCTGGCGGCGTTGa                                                                     <  2:231237/149‑1 (MQ=255)
                                                                                   caccatATCAAGCCTACATACTTTCCGGTTTTGTAGGCCAGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACGTGGTGATACGAGTCTGCGCGT‑CTTTCAGGGCTTCATCGACAGTCTGACGACCGCTGGCGGCGTTGAt                                                                    <  1:73196/144‑1 (MQ=39)
                                                                                    gTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTGGTGATACGAGTCTGCGCGT‑CTTTCAGGGCTTCATCGACAGTCTGACGACCGCTGGCGGCGTTGa                                                                     <  2:560764/147‑1 (MQ=255)
                                                                                     tCTTATCCGGCCTACATACGTATCGGTTTTGTAGGCCGTAAAACGCGTTCACAACGTATCCCGTGTTGCACAGCATGACTTGGGTATACGTGTCGTCGCGT‑GGTTTAGGGCTTCATCGACAGTCTGACGACCGCTGGCGGCGTTGATCa                                                                  <  2:88687/149‑1 (MQ=255)
                                                                                     tCTTATCAGGCCTGCATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTGGTGATACGAGTCTGCGCGT‑CTTTCAGGGCTTCATCGACAGTCTGACGACCGCTGGCGGCGTTGATCa                                                                  <  1:874346/149‑1 (MQ=255)
                                                                                         aTCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTGGTGATACGAGTCTGCGCGT‑CTTTCAGGGCTTCATCGACAGTCTGACGACCGCTGGCGGCGTTGATCACCGc                                                              >  1:587274/1‑149 (MQ=255)
                                                                                            aGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCGTCTGGACTTTTCCAGCATTGCTTTGGGATTCGCG‑CTGCCAATGAACTTGGCGCAGCAGCGACAGCCTTACGACGGCTGGCGGCGTTGACCACCGCAGt                                                           >  2:211563/1‑149 (MQ=255)
                                                                                             ggCCTACAGACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTGGTGATACGAGTCTGCGCGT‑CTTTCAGGGCTTCATCGACAGTCTGACGACCGCTGGCGGCGTTGATCACCGCAGTa                                                          <  2:104752/149‑1 (MQ=255)
                                                                                              gCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTGGTGATACGAGTCTGCGCGT‑CTTTCAGGGCTTCATCGACAGTCTGACGCACACTGCCGGCGTTGATCACCGCAGTAc                                                         >  1:106513/1‑149 (MQ=255)
                                                                                              gCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTGGTGATACGAGTCTGCGCGT‑CTTTCAGGGCTTCATCGACAGTCTGACGACCGCTGGCGGCGTTGGTCACCGCAGTAc                                                         >  1:451542/1‑149 (MQ=255)
                                                                                              gCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTGGTGATACGAGTCTGCGCGT‑CTTTCAGGGCTTCATCGACAGTCTGACGACCGCTGGCGGCGTTGATCACCGCAGTAc                                                         <  2:681115/149‑1 (MQ=255)
                                                                                                cTACATACGTCACGCTATAGTAGCCCAGACAAGGCGTTCACGCCGCATCCGGCATTACACAGCATTATTTGGTCATACAAGTCTGCGCGT‑CTTTCAGGGCTTAATCGGCAATCTGACGACCGCTGGCCGCGTTGACCACCGCAATACGc                                                       >  2:733241/1‑149 (MQ=255)
                                                                                                 tACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTGGTGATACGAGTCTGCGCGT‑CTTTCAGGGCTTCATCGACAGTCTGACGACCGCTGGCGGCGTTGATCACCGCAGTACGCa                                                      <  2:917491/149‑1 (MQ=255)
                                                                                                   cctACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTGGGTGATACGAGTCTGCGCGT‑CTTTCAGGGCTTCATCGACAGTCTGACGACCGCTGGCGGCGTTGATCACCGCAGTACGCACg                                                    <  2:501615/147‑1 (MQ=255)
                                                                                                    aTACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTGGTGATACGAGTCTGCGCGT‑CTTTCAGGGCTTCATCGACAGTCTGACGACCGCTGGCGGCGTTGATCACCGCAGTACGCACg‑g                                                  >  2:482202/1‑149 (MQ=255)
                                                                                                        gTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTGGTGATACGAGTCTGCGCGT‑CTTTCAGGGCTTCATCGACAGTCTGACGACCGCTGGCGGCGTTGATCACCGCAGTACGCACG‑GCATa                                              >  1:1000352/1‑149 (MQ=255)
                                                                                                             ggTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTGGTGATACGAGTCTGCGCGT‑CTTTCAGGGCTTCATCGACAGTCTGACGACCGCTGCCGGCCTTGATCCATGTCGTACGCACA‑GAATACCAGa                                         >  1:181040/1‑149 (MQ=38)
                                                                                                             ggTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTGGTGATACGAGTCTGCGCGT‑CTTTCAGGGCTTCATCGACAGTCTGACGACCGCTAGCGGAGTTGATCACCGCAGTACGCACG‑GCATACCAGa                                         >  1:21173/1‑149 (MQ=255)
                                                                                                               ttttGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTGGTGATACGAGTCTGCGCGT‑CTTTCAGGGCTTCATCGACAGTCTGACGACCGCTGGCGGCGTTGATCACCGCAGTACGCACG‑GCATACCAGaaa                                       <  1:482202/149‑1 (MQ=255)
                                                                                                               ttttGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTGGTGATACGAGTCTGCGCGT‑CTTTCAGGGCTTCATCGACAGTCTGACGACCGCTGGCGGCGTTGATCACCGCAGTACGCACG‑GCATACCAGaaa                                       >  1:418289/1‑149 (MQ=255)
                                                                                                                  tatAGGCGGGACAAGGCGTGCCCGCCGCAGCCGGCATTTCACTGCATTACCGGGTGATACGAGTCTGCGCGT‑CTTTCATGGCTTCATCGACAGTCTGACGACCGCTGGCGGCGTTGATCACCGCAGTACGCACG‑GCATACCAGAAAGCg                                    <  2:938691/147‑1 (MQ=255)
                                                                                                                       gCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTGGTGATACGAGTCTGCGCGT‑CTTTCAGGGCTTCATCGACAGTCTGACGACCGCTGGCGGCGTTGATCACCGCAGTACGCACG‑GCATACCAGAAAGCGGACAt                               <  1:392126/149‑1 (MQ=255)
                                                                                                                         cGGACAAGGCGTTCACGCCGCATCCGGCATTTTACTGCTTTACTTGGTGATACGAGTCTGCGCGT‑CTTTCAGGGCTTCATCGACAGTCTGACGACCGCTGGCGGCGTTGATCACCGCAGTACGCACG‑GCATACCAGAAAGCGGACATCt                             <  1:121027/149‑1 (MQ=255)
                                                                                                                         cGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTGGTGATACGAGTCTGCGCGT‑CTTTCAGGGCTTCATCGACAGTCTGACGACCGCTGGCGGCGTTGATCACCGCAGTACGCACG‑GCATACCAGAAAGCGGACacca                             >  2:353119/1‑146 (MQ=255)
                                                                                                                            ccAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTGGTGATACGATTCTGCGAGT‑CTTTCAGGGCTTCATCGACAGTCTGACGACCGCTGGCGGCGTTGATCACCGCAGTACGCACG‑GCATACCAGAAAGCGGACATCTGCg                          >  2:760524/2‑149 (MQ=255)
                                                                                                                             cAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTGGTGATACGAGTCTGCGCGT‑CTTTCAGGGCTTCATCGACAGTCTGACGACCGCTGGCGGCGTTGATCACCGCAGTACGCACG‑GCATACCAGAAAGCGGACATCTGCgg                         <  1:772631/149‑1 (MQ=255)
                                                                                                                                   gTTCACGCCGCATCCGGCGTTTCACAGCATGACTTGGTGATACGGGTCTGCGCGT‑CTTTCAGAGCTTCGTCGAGAGTCTGACGACGGCTGGCGGCGTTGATCACCGCAGGACGCACG‑GCAGACCCGAAATGGGACATCTGTGAGACGtt                   >  2:782189/1‑149 (MQ=255)
                                                                                                                                    ttCACGCCGCATCCGGCATTTCACAGCTTTACTTGGTGATACGAGTCTGCGCGT‑CTTTCAGGGCTTCATCGACAGTCTGACGACCGCTGGCGGCGTTGATCACCGCAGTACGCACG‑GCATACCAGAAAGCGGACATCTGCGGGATGTTc                  <  1:904867/149‑1 (MQ=255)
                                                                                                                                    ttCACGCCGCATCCGGCATTTCACAGCATTACTTGGTGATACGAGTCTGCGCGT‑CTTTCAGGGCTTCATCGACAGTCTGACGACCGCTGGCGGCGTTGATCACCGCAGTACGCACG‑GCATACCAGAAAGCGGACATCTGCGGGagtttc                  >  2:983955/1‑144 (MQ=255)
                                                                                                                                     tCACGTCGCATCCGGCAGATCACAGCATTACATGGTGAGACGAGTCTGCGCGT‑CTTTGAGGGCTTCATCGACAGTCTGACGCCCGCTGGCGGAGTTGATCTCCGCAGAACGCACG‑GCATACGAGAAAGCAGACATCTCCGGGATGTTCg                 <  2:539937/149‑1 (MQ=255)
                                                                                                                                     tCACGCCGTATCCGGCATTTCACAGCATTACTTGGTGATACGAGTCTGCGCGT‑CTTTCAGGGCTTCATCGACAGTCTGACGACCGCTGGCGGCGTTGATCACCGCAGTACGCACG‑GCATACCAGAAAGCGGACATCTGCGGGATGTTCg                 <  1:261782/149‑1 (MQ=255)
                                                                                                                                        cgccgcATCGTGCATTTGACAGGATCACGTGGTGATACGAGTCTGGGCGT‑CTTTCAGGGCTTCATCGACAGTCTGACGACCGCTGGCGGCGTTGATCACCGCAGTAC‑CACGCGTATACCAGAAAGAGGACATCTGCGGGATGTTCGGCa              <  2:171731/149‑1 (MQ=255)
                                                                                                                                        cgccgcATCCGGCATTTCACAGCATTACGTGGTGATACGAGTCTGCGCGT‑CTTTCAGGGCTTCATCGACAGTCTGACGACCGCTGGCGGCGTTGATCACCGCAGTACGCACG‑GCATACCAGAAAGCGGACATCTGCGGGATGTTCGGCa              <  2:597300/149‑1 (MQ=255)
                                                                                                                                        cgccgcACCCGGCATTTCACAGCATTACTTGGTGATACGAGTCTGCGCGT‑CTTTCAGGGCTTCATCGACAGTCTGACGACCGCTGGCGGCGTTGATCACCGCAGTACGCACG‑GCATACCAGAAAGCGGACATCTGCGGGATGTTCGGCa              <  1:356591/149‑1 (MQ=255)
                                                                                                                                               tCCGGCctaaaaaaccgaaacgtatgtaggcctgataagacgcgtcagcgtcgcatcaggcagttgttgtcggataaggcgtgaaagccttatccgtcctggaatgaggaagaaccccatggatgtcattaaaaagaaacattggtggc         >  1:501615‑M2/1‑6 (MQ=255)
                                                                                                                                               tCCGGCATTTCACAGCATTACTTGGTGATACGAGTCTGCGCGT‑CTTTCAGGGCTTCATCGCCAGTGTGACGACCGCTGGCGGCGTTGATCACCGCAGTACGCACG‑GCATACCAGAAAGCGGACATCTGCGGGATGTTCGGCATGATTTc       >  1:944887/1‑149 (MQ=255)
                                                                                                                                                 cGGCctacaaaaccgaaacgtatgtaggcctgataagacgcgtcagcgtcgcatcaggcagttgttgtcggataaggcgtgaaagccttatccgtcctggaatgaggaagaaccccatggatgtcattaaaaacaaacattggtggcaa       <  2:633964‑M2/149‑146 (MQ=255)
                                                                                                                                                 cGGCctacaaaaccgaaacgtatgtaggcctgataagacgcgtcagcgtcgcatcaggcagttgtggtcggctaaggcgtgaaagccttatccgtcctggaatgaggaagaacccactggatgtcattagaaaacaaccttggtggcaa       <  2:581041‑M2/149‑146 (MQ=255)
                                                                                                                                                 cGGCATTTCACAGCATTACTTGGTGATACGAGTCTGCGCGT‑CTTTCAGGGCTTCATCGACAGTCTGACGACCGCTGGCGGCGTTGATCACCGCAGTACGCCCG‑GCATACCAGAAAGCGGACATCTGCGGGATGTTCGCAATTAATTCAc     >  2:457412/1‑149 (MQ=255)
                                                                                                                                                 cGGCATTTCACAGCATTACTTGGTGATACGAGTCTGCGCGT‑CTTTCAGGGCTTCATCGACAGTCTGACGACCGCTGGCGGCGTTGATCACCGCAGTACGCACG‑GCATACCAGAAAGCGGACATCTGCGGGATGTTCGGCATGATTTCAc     <  1:752996/149‑1 (MQ=255)
                                                                                                                                                 cGGCATTTCACAGCATTACTTGGTGATACGAGTCTGCGCGT‑CGTTCAGGGCTTCATCGCCAGTCTGACGACCGATGGCGGCGTTGATCACCGCAGTACGCACG‑GCATACCAGAAAGCGGACATCTACGGGATCATCGGCATGATTTCAc     >  2:387698/1‑149 (MQ=255)
                                                                                                                                                  ggCATTTCACAGCATTACTTGGTGATACGAGTCTACGCGT‑CTTTCAGGGCTTCATCGACAGTCTGACGACCACTGGCGGCGTTCATCACCACAGTACGCACG‑GCATACCACAAAGCAGACATGTCCGGCATGTTCGGACTGATTTCAcc    >  2:26429/1‑149 (MQ=255)
                                                                                                                                                   gCATTTCACAGCATTACTTGGTGATACGAGTCTGCGCGT‑CTTTCAGGGCTTCATCGACAGTCTGACGACCGCTGGCGGCGTTGATCACCGCAGTACGCACG‑GCATACCAGAAAGCGGACATCTGCGGGATGTTCGGCATGATTTCACCt   >  1:684762/1‑149 (MQ=255)
                                                                                                                                                    |                                                                                                                                                      
CATCCATGGGGTTCTTCCTCATTCCAGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTGGTGATACGAGTCTGCGCGT‑CTTTCAGGGCTTCATCGACAGTCTGACGACCGCTGGCGGCGTTGATCACCGCAGTACGCACG‑GCATACCAGAAAGCGGACATCTGCGGGATGTTCGGCATGATTTCACCTT  >  NC_000913_3_hsa_pgi/4245097‑4245393

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.