| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913_3_hsa_pgi | 4218555 = | 63 (1.180) | 6 (0.130) +AAAACGCCTTATCCA |
5/240 | NT | 9.7% | noncoding (120/132 nt) | REP311 (repetitive extragenic palindromic) element; contains 3 REP sequences | REP311 (repetitive extragenic palindromic) element; contains 3 REP sequences |
| ? | NC_000913_3_hsa_pgi | = 4254030 | NA (NA) | noncoding (102/130 nt) | RIP317 (repetitive extragenic palindromic) element; contains 3 REP sequences and 1 IHF site | RIP317 (repetitive extragenic palindromic) element; contains 3 REP sequences and 1 IHF site | |||||
Only 100 of 1058 total aligned reads displayed.
TTTTAGGGCTGGCAATGAGTTACTGGCATTTCTGATGATGTAAAAAAGCCGGATGATCATCCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATT‑TGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGATTACCCTTCGCCCTGCGTCGCACTCTCAATCGTCAAACGCACGTCTGATGTAATCAACTCCGCCAGCAACTGATAAACCTTCATCGTTTCTGCCGGTTCGGCATCGC > NC_000913_3_hsa_pgi/4253882‑4254177 | ttgtaaggCTCGCAATTACTTACTTGCATTTCTGATTATGTAAAAAAGCCGGATGATCATCCGGCTTTCTTCTTGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATT‑TGCAGATTATGGAAGGc < 2:696604/143‑1 (MQ=255) tttAGGGCTGGCAATGAGTTACTGGCATTTCTGATGATGTAAAAAAGCCGGATGATCATCCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATT‑TGCAGATTATGGAAGGcc < 1:158705/149‑1 (MQ=255) tGGCAATGAGTTACTGGCATTTCTGATGATGTAAAAAAGCCGGATGATCATCCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATT‑TGCAGATTATGGAAGGTCGGATAAgg < 1:983424/149‑1 (MQ=255) tGGCAATGAGGTTCTGGCATTTCGTATGATGTAAAAAAGCCGGATGATCATCCGGCTTCCGTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCATACACAACACATCGCAATTTATTGAATT‑TGCAGATTATGGAAGGCCGGATAAgg < 2:610854/149‑1 (MQ=255) gCAATGAGTTACTGGCATTTCTGATGATGTAAAACAGCCGGATGATCATCCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATT‑TGCAGATTATGGAAGGCCGGATAAGGCg > 2:815930/1‑149 (MQ=255) atttACTGGGATTTCTGATTATGTAATAAAGCAGGATGATTATTCGGCTTTCGTCTGGGTTGCCTGATGGGCGGCGCTTCGCAGGGCTATACAAAACATCTCTATTTATTTAATT‑TGCAGATTATGGAAGGCCGGATAAGGCGTTTTcg < 2:51029/147‑1 (MQ=255) aGTTACTGGCATTTCTGATGATGTAAAAAAGCCGGATGATCATCCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATT‑TGCAGATTATGGAAGGCCGGATAAGGCGTTTTCG > 1:539851‑M2/1‑149 (MQ=255) ttACGGGCATTTCTGATGATGTAAAAAAGCCGGATGATCATCCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATT‑TGCAGATTATGGAAGGCCGGATAAGGGGtttcctcc < 2:675222/149‑6 (MQ=255) tGGCATTTCTGATGATGTAAAAAAGCCGGATGATCATCCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACGCAACACATCGCAATTTATTGGATT‑TGCAGATTATGGAAGGCCGGGTAAGGCGTTTTCGgcccat < 2:768187‑M2/149‑7 (MQ=255) ggCTTTTCTGATGATGTAAAAAAGCCGGATGATCATCCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATT‑TGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATC > 1:568572‑M2/1‑149 (MQ=255) gCATTTCTGATGATGTAAAAACGCCGGATGATCATCCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATT‑TGCAGATTATGGCAGACCGGATAAGGAGTTTTCGCCGCATCa < 2:727847‑M2/149‑2 (MQ=255) gCATTTCTGATGATGTAAAAAAGCCGGATGATCATCCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATT‑TGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCC < 1:1002738‑M2/149‑1 (MQ=255) tttCTGATGATGTAAAAAAGCCGGATGATCATCCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATT‑TGCAGCTTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGC < 1:356612‑M2/149‑1 (MQ=255) tgatgaTGTAAAAAAGCCGGATGATCATCCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATT‑TGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaatt < 2:578504‑M2/149‑5 (MQ=255) tgatgaTGTAAAAAAGCCGGATGATCATCCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAAGCCTACACAACACATCGCAATTTATTGAATT‑TGCAGCTTATGGAAAGCCGGATACGGCGTGTTGTCCGCATCCGGCaatc < 2:295368‑M2/149‑5 (MQ=255) atgatgTAAAAAAGCCGGATGATCATCCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATT‑TGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattct < 2:624988‑M2/149‑7 (MQ=255) atgatgTAAAAAAGCCGGATGATCATCCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATT‑TGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGACGCATCCGGCaattct < 1:515084‑M2/149‑7 (MQ=255) atgatgTAAAAAAGCCGGATGATCATCCGGCTTTCTTCTGGGTGGCCTGATGCGCGGCGCTTCCCAGGCCTACACAACACATCGCAATTTATTGAATT‑TGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCagcaattcc < 2:283137‑M2/149‑10 (MQ=255) atgTAAAAAAGCCGGATGATCATCCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATT‑TGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctg > 1:557500‑M2/1‑140 (MQ=255) atgTAAAAAAGCCGGATGATCATCCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATT‑TGCAGATTATGGAAGGCCGGAGAAGGCGTTTTCGCCGCATCCGGCaattctctg > 1:846027‑M2/1‑140 (MQ=255) tgTAAAAAAGCCGGATGATCATCCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATT‑TGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgc > 1:965376‑M2/1‑139 (MQ=255) tgTAAAAAAGCCGGATGAGCATCCGGCTTGCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCGACACAACACATCGCAATTTATTGAATT‑TGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgc > 2:784081‑M2/1‑139 (MQ=255) gTAAAACAGCCGGATGATCATCCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATT‑TGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgct > 1:309084‑M2/1‑138 (MQ=255) gTAAAAAAGCCGGATGATCATCCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATT‑TGCAGATTATGGAAGGCCGGATAAGGCGGTTTCGCCGAATCCCacaattctctgct < 1:390560‑M2/149‑14 (MQ=255) tAAAAAAGCCGGATGATCATCCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATCAATGT‑AACAGATTTTGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCacttctctgctc < 1:483212‑M2/149‑13 (MQ=255) aaaaaGCCGGATGATCATCCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATT‑TGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcct < 1:528592‑M2/149‑15 (MQ=255) aaaGCCGGATGATCATCCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATT‑TGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGGATCCGGCaattatctgcacctga < 1:935464‑M2/149‑17 (MQ=255) gCCGGATGATCATCCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATT‑TGCAGATTATGGAAAGCCGCAGAAGTCGTTTTCGCCGCATCCGGCaattctctgctcctgatga > 1:897926‑M2/1‑130 (MQ=255) ggATGATCATCCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATT‑TGCAGATTATGGAAGACCGGATAAGGCGTTTTCGCCGCATCCGacaattctctgctcctgatgaggg < 1:423670‑M2/149‑25 (MQ=255) gatgatCATCCGGCTTTCTTCTGGGTTGCCTGACGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAACTTATTGAATT‑TGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattccctgctcctgatgagggc < 1:746433‑M2/149‑24 (MQ=255) atgatCATCCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATT‑TGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagggcg > 2:39712‑M2/1‑125 (MQ=255) atgatCATCCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATAGCAATTTATTGAATT‑TGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCacttctctgctcctgatgagggcg < 2:528580‑M2/149‑25 (MQ=255) tcatcCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATT‑TGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGCCaatcctctgctcctgatgagggcgctaa < 2:192776‑M2/149‑29 (MQ=255) tcCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATT‑TGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctcctcctgatgagggcgctaaatg < 2:591190‑M2/149‑32 (MQ=255) ggCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGGATT‑TGCAGATTATGGAAGGCCGGATAAGGCATTTTCGCCGCATACGGCaattctctgctcctgatcagggcactaagtgccg < 1:137201‑M2/149‑35 (MQ=255) ggCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATT‑TGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagggcgctaaatgccg < 1:172095‑M2/149‑35 (MQ=255) ttcttcTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATT‑TGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagggcgctaaatgccgcgtg > 1:945248‑M2/1‑111 (MQ=255) ttcttcTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATT‑TGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagggcgctaaatgccgcgtg < 1:642655‑M2/149‑39 (MQ=255) ttcttcTGGGTTGCCTGATGCGCGGCGCTTCGCAGGCCTACAACCCACATCGCAATTTATTGAATT‑TGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagggcgctaaatgccgcgtg > 1:831418‑M2/1‑111 (MQ=255) tttctgGGTTGCCTGATGGGCGGCGCTTCTCAGGCCTACACAACGCATCGCAATTTATTGAATT‑TGCAGATTATGGAAGGCCGGATAAGGCGTTCCCACCGCATCCGGCaattctctgctcctgatgagggcgctaaatgccgcgtggc > 1:448714‑M2/2‑109 (MQ=255) ttctGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATT‑TGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagggcgctaaatgccgcgtggcc > 2:977086‑M2/1‑108 (MQ=255) ttctGGGTTGCCTCATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCTATTTATTGAATT‑TGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagggcgctaaatgccccgtggcc < 1:822872‑M2/149‑42 (MQ=255) tctGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATT‑TGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgag > 2:114339‑M2/1‑107 (MQ=255) ggTTGCCTGATGCGCGGCGCTTCTCAGGTCTACACAACACATCGCAATTTATTGAATT‑TGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagggcgctaaatgccgcgtggcctggaa > 1:251969‑M2/1‑103 (MQ=255) gTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATT‑TGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagggcgctaaatgccgcgtggcctggaat > 1:672347‑M2/1‑102 (MQ=255) ccTGATGCGCGGCGCTTCTCAGGCCTACACAACACATAGCAATTTAA‑GAATTGTATAAATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagggcgctaaatgccgcgtggcctggaattatt > 1:281239‑M2/1‑98 (MQ=255) cTGATGCGCGGCGCTTCTCAGACCTACACAACACATCGCAATTTATTGAATT‑TGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagggcgctaaatgccgcgtggcctggaattattg < 2:886117‑M2/149‑53 (MQ=255) gcggcgCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATT‑TGCAGATTATGGAAGGCCGGATAAGGCGTTTTTTtttttttttgcaattctctgctcctgatgagggcgctcaatgccgcgtggcctggaattcttgattgctc < 2:236251‑M2/149‑71 (MQ=255) gcggcgCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATT‑TGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCTGGTGGTCGACGCGGATTACCCTTCGCCCTGCGTCGCACTCTCAATCGTCAAACGCACGACTg > 1:231793/1‑149 (MQ=255) gcggcgCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATT‑TGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagggcgctaaatgccgcgtggcctg > 1:888779‑M2/1‑90 (MQ=255) gcggcgCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATT‑TGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgatcctgatgcgggcgctaaatgccgcgtggcctggaatgattgattgcta < 1:620423‑M2/149‑60 (MQ=255) cgcTTCTCAGGCCTACAAAACACATTGCAATTTATTGAATT‑TGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagggcgctaaatgccgcgtggcctggaattattgattgctcaaac > 1:268138‑M2/1‑86 (MQ=255) tctcAGGCCTACACAACACATCGCAATTTATTGAATT‑TGCAGATTATGGAAGGCCGGATAAAGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagggcgccaaatgcccactggcctggaattattgattgctcaaaccatt < 2:547996‑M2/149‑68 (MQ=255) tcAGGCCTACACAACACATCGCAATTTATTGAATT‑TGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagggcgctaaatgccgcgtggcctggaattattgattgctcaaaccatttt > 2:560368‑M2/1‑80 (MQ=255) gCCTGCAAAACAGATGGCAATTTATTGAATT‑TGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCGGCATCCGGCaattctctgctcctgatgagggcgctaaatgccgcgtggcctggaattattgattgctcaaaccattttgcaa > 1:218410‑M2/1‑76 (MQ=255) gCCTACACAACACATCGCAATTTATTGAATT‑TGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagggcactaaatgccgcgtggcctggaattattgattgctcaaaccattttgcac < 1:863308‑M2/149‑74 (MQ=255) ccTACACAAAAAATCGCCATTTATTGAATT‑TGCAGATTATGGAAGGCCGGATAATGCGGTTTCGCCGCATCCGGCaattctctgctccttatgatggcgctaaatgccgcgtgacctggaattattgattgctcaaaccattttgcaag > 2:63642‑M2/1‑75 (MQ=255) cTACACAACACCTCGCAATTTATTGAATT‑TGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagggcgctaaatgccgcgtggcctggaattattgattgctcaaaccattttgcaagg > 1:655747‑M2/1‑74 (MQ=255) tACACAACACATCGCAATTTATTGAATT‑AGAAGACTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagggcgctaaatgccgcgtggcctggaattattgattgctcaaaccattttgcaaggc < 1:995446‑M2/149‑77 (MQ=255) acacaacacaTCGCAATTTATTGAATT‑TGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGGaattctctgctcctgatgagggcgctaaatgccgcgtggcctacacgaagttattgctcaaaccattttgcaaggct > 2:217390‑M2/1‑72 (MQ=255) cacaacacaTCGCAATTTATTGAATT‑TGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGATTACCCTTCGCCCTGCGTCGCACTCTCAATAGTCAAACGCACGTCTGATGTAATTAACTCCGCCAg > 1:881074/1‑149 (MQ=255) acaacacaTCGCAATTTATTGAATT‑TGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagggcgctaaatgccgcgtggcctggaattattgattgctcaaac > 1:406684‑M2/1‑70 (MQ=255) aactgatcccaATTTATTGAATT‑TGCAGATTACGGAAGGTCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctactgatgagggccctaaatgccgcgtggcctggaattattgattgctcaaaccattttgcaaggcttcga > 1:499057‑M2/6‑68 (MQ=255) aacacaTCGCAATTTATTGAATT‑TGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagggcgctaaatgccgcgtggcctggaattattgattgctcaaaccattttgcaaggcttcga > 2:841959‑M2/1‑68 (MQ=255) aacacaTCGCAATTTATTGAATT‑TGCAGATTAGGGAAGACCGGATAAGGCGTTTTCGCCGCATCCGacaattctatactcctgaggagggcgctaaaagacgcgtggcctggaattattgattggtcgaaacatgttgaatgtcttcga < 2:124829‑M2/149‑84 (MQ=255) caTCGCAATTTATTGAATT‑TGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagggcgctaaatgccgcgtggcctggaattattgattgctcaaaccattttgcaaggcttcgatgct > 1:915343‑M2/1‑64 (MQ=255) tCGCAATTTATTGAATT‑TGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagggcgctaaatgccgcgtggcctggaattattgattgctcaaaccattttgcaaggcttcgatgctca < 1:609216‑M2/149‑88 (MQ=255) tttATTGAATT‑TGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagggcgctaaatgccgcgtggcctggaattattgattgctcaaaccattttgcaaggctttgatgctcagtatgc < 2:957030‑M2/149‑94 (MQ=255) tttATTGAATT‑TGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagggcgctaaatgccgcgtggcctggaattattgattgctcaaaccattttgcaaggcttcgatgctcagtatgg < 2:905267‑M2/149‑94 (MQ=255) tttATTGAATT‑TGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagggcgctaaatgccgcgtggcctggaattattgattgctcaaaccattttgcaaggcttcgatgctcagtatgg < 1:703628‑M2/149‑94 (MQ=255) aTTGAATT‑TGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagggcgctaagtgccgcgtggcctggaattattgattgctcaaaccattttgcaaggcttcgatgctcattatggtcg < 1:691926‑M2/149‑97 (MQ=255) aTTGAATT‑TGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagggcgctaaatgccgcgtggcctggaattattgattgctcaaaccattttgcaaggcttcgatgctcagtatggtcg < 2:656959‑M2/149‑97 (MQ=255) ttGAATT‑TGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagggagctaaatgccgcgtcgcctggaattattgcttgctcaaaccattttgcaaggcttcggtgctcagtatcgtcca < 2:378129‑M2/149‑98 (MQ=255) ttGAATT‑TGCACATTTTGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGATTATCCTTCGCCCTGTGTCGTACTCTCAATCGTCAATCGCACGTCTGATGTAATCAACTCCGCCATCAACTGATAAACCTTCATc < 2:446478/149‑1 (MQ=255) gAATT‑TGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagggcgctaaatgccgcgtggcctggaattattgattgctcaaaccattttgcaaggcttcgatgctcagtatggtcgatt > 1:589633‑M2/1‑50 (MQ=255) gAATT‑TGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagggcgctaaatgccgcgtggcctggaattattgattgctcaaaccattttgcaaggcttcgatgctcagtatggtcgatt < 1:724298‑M2/149‑100 (MQ=255) aaTT‑TGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagggcgctaaatgccgcgtggcctggaattattgattgctcaaaccattttgcaaggcttcgatgctcagtatggtcgattc > 2:746852‑M2/1‑49 (MQ=255) aTT‑TGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagggcgctaaatgccgcgtggcctggaattattgattgctcaaaccattttgcaaggcttcgatgctcagtatggtcgattcc > 1:766465‑M2/1‑48 (MQ=255) at‑tgTAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagggcgataaatgccgcgtggcctggaattattgattgctcaaaccattttgcaaggcttcgatgctcagtatggtcgattcct > 1:366775‑M2/2‑47 (MQ=255) t‑tGCAGATTATGGAAGGCtggataaggcgttttcgccgcatccggcaattctctgctcctgatgagggcgctaaatgccgcgtggcctggaattattgattgctcaaaccattttgcaaggcttcgatgctcagtatggtcgattcctc > 1:346582‑M2/1‑18 (MQ=255) cggatTATGGAAGGCCGTATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagcgccctaaatgccgcgttgcctggaattattgattgcttaaaccattttgcaaggcttcgatgctcagtatggtcgattcctcgaa > 2:337841‑M2/3‑43 (MQ=255) cAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaagtctgtgctcctgatgagggggctaaatgccgcgtggcctggaattattgattgctcaaaccattttgcaaggcttcgatgctcagtatggtcgattcctcgaa > 1:379289‑M2/1‑43 (MQ=255) cAGAATAGGGAAGGCCCGATAAGGCGTTTTCGCCACATCCGGCaattctctgctcctgatgagggcgctaaatgccgcctgccctcgaattattgattgctccaaccattttgcaaggcttcgatgctcagtatggtcgattcctcgaa > 2:174234‑M2/1‑43 (MQ=255) aGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagggcgctaaatgccgcgtggcctggaattattgattgctcaaaccattttgcaaggcttcgatgctcagtatggtcgattcctcgaag < 2:315179‑M2/149‑108 (MQ=255) gATTATGGAAGGTCGGATAAGGCGTTTTCGCCGTATCCGGCaattttctgctcctgatgagggcgctaaatgccgcgtggcctggaattattgattgctcaaaccattttgcaaggcttcgatgctcagtatggtcgattcctcgaagt > 1:465440‑M2/1‑41 (MQ=255) gATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagggcgctaaatgccgcgtggcctggaattattgattgctcaaaccattttgcaaggcttcgatgctcagtatggtcgattcctcgaagt < 1:331267‑M2/149‑109 (MQ=255) aTTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagggcgctaaatgccgcgtggcctggaattattgattgctcaaaccattttgcaaggcttcgatgctcagtatggtcgattcctctaagtg < 1:18707‑M2/149‑110 (MQ=255) ttATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctcttctcctgatgagggcgctaaatgccgcgtggcctggaattatt > 2:464024‑M2/1‑39 (MQ=255) ttATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagggcgctaaatgccgcgtggcctggaattattgattgctcaaaccattttgcaaggcttcgatgctcagtatggtcgattcctcgaagtga < 1:200645‑M2/149‑111 (MQ=255) ttATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagggcgctaaatgccgcgtggcctggaattattgattgctcaaaccagtttgcaaggcttcaaaacaccttatggtcgattcctcgaagtga < 2:413864‑M2/149‑111 (MQ=255) ttATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGATTACCCTTCGCCCTGCGTCGCAGTCTCAATCGTCAAACGCACGTCTGATGTAATCAACTCCGCCAGACACTGATAAACCTTCATCGTTTTTGCCGGtt > 2:930901/1‑149 (MQ=255) tATTGAATGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagggcgctaaatgccgcgtggcctggaattattgattgctcaaaccattttgcaaggcttcgatgctcagtatggtcgattcctcgaagtgac > 1:800141‑M2/1‑38 (MQ=255) tATGGGAGGCCGGATAAGGCGTTTTCGtcgcatccggcaattctctgcttctgatgagggcgctaaatgccgcgtggcctggaattattgattgctcaaaccattttgcaaggcttcgatgctcagtatggtcgattcctcgaagtgac > 2:355243‑M2/1‑27 (MQ=255) tGGAAGGCCGGATACGGCGTGTTCGCCGCATCCGGCaattctctgctcctgatgagggcgctaaatgccgcgtggcctggaattattgattgctcaaaccattttgcaagggttcgatgctcagtatggtcgattcctcgcagtgccct < 2:260265‑M2/149‑114 (MQ=255) ggAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagggcgctaaatgccgcgtggcctggaattattgattgctcaaaccattttgcaaggcttcgatgctcagtatggtcgattcctcgaagtgacctc < 2:867404‑M2/149‑115 (MQ=255) ggAAGGCCGGATAAGGCGTTTTCGCCGAATCCGGCaattctctgctcctgatgagggcgctaaatgccgcgtggcctggaattattgattgctcaaaccattttgcaaggcttcgatgctcagtatggtcgattcctcgaagtgacctc > 2:494561‑M2/1‑35 (MQ=255) aaGGCCGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGATTACCCTTCGCCCTGCGTCGCACTCTCAATCGTCAAACGCACGTCTGATGTAATCAACTCCGCCAGCAACTGATAAACCTTCATCGTTTCTGCCGGTTCGGCAt < 1:130179/149‑1 (MQ=255) ggCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagggcgctaaatgccgcgtggcctggaattattgattgctcaaaccattttgcaaggcttcgatgataactatagtcgatttatcgtattgacctcatct < 1:11475‑M2/149‑119 (MQ=255) ggCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagggcgctaaatgccgcgtggcctggaattattgattgctcaaaccattttgcaaggcttcgacgctcagtatggtcgattcctcgaagtgacctccggt < 1:3192‑M2/149‑119 (MQ=255) gCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagggcgctaaatgccgcgtggcctggaattattgattgctcaaaccattttgcaaggcttcgatgctcagtatggtcgattcctcgaagtgacctccggtg > 2:147843‑M2/1‑30 (MQ=255) | TTTTAGGGCTGGCAATGAGTTACTGGCATTTCTGATGATGTAAAAAAGCCGGATGATCATCCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATT‑TGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGATTACCCTTCGCCCTGCGTCGCACTCTCAATCGTCAAACGCACGTCTGATGTAATCAACTCCGCCAGCAACTGATAAACCTTCATCGTTTCTGCCGGTTCGGCATCGC > NC_000913_3_hsa_pgi/4253882‑4254177 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |