| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913_3_pae_pgi | 1096988 = | 70 (1.030) | 9 (0.130) | 9/272 | 7.1 | 11.6% | intergenic (+159/+577) | ycdU/serX | putative inner membrane protein/tRNA‑Ser |
| ? | NC_000913_3_pae_pgi | 1097191 = | NA (NA) | intergenic (+362/+374) | ycdU/serX | putative inner membrane protein/tRNA‑Ser | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
CCAGATAATACATATATGTTCTGTACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCT‑AACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGACCCCCGGTCGGGGCTTCTC > NC_000913_3_pae_pgi/1096848‑1097136 | ccAGATAATACATATATGTTCTGTACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACAATTTCCCCTCGCCCTAAACGCACG‑GTGATCTGGTTCCCGGTGTGTATAATATACGAAAAAAAAGCCCGTAc > 1:885250/1‑149 (MQ=255) taataCATATATGTTCTGTACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCT‑AACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCg > 2:17801/1‑149 (MQ=255) aataCATATATGTTCTGTACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCT‑AACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGt > 1:1133514/1‑149 (MQ=255) ataCATATATGTTCTGTACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCT‑AACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATATGAAAAAAAAGCCCGTACTTTCGtt < 2:1048468/149‑2 (MQ=255) taCATATATGTTCTGTACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCT‑AACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTAc > 1:637869/1‑149 (MQ=255) taCATATATGTTCTGTACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCT‑AACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTAc > 2:679985/1‑149 (MQ=255) atatatGTTCTGTACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCT‑AACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTCCGAg > 1:77326/1‑149 (MQ=255) atatatGTTCTGTACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCT‑AACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAg > 1:1003260/1‑149 (MQ=255) tatatGTTCTGTACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCT‑AACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGc > 1:950000/1‑149 (MQ=255) ttCTGTACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCT‑AACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACG‑AAAAAAAGCCCGTACTTTGGTACGAGCTcttctt > 1:1007347/1‑149 (MQ=255) tCTGGACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCT‑AACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTcttctt < 1:995111/149‑1 (MQ=255) tACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCT‑AACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTaaa > 1:150432/1‑149 (MQ=255) tACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCT‑AACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTaaa > 2:773443/1‑149 (MQ=255) tACTCTCGTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCT‑AACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTaaa < 2:512093/149‑1 (MQ=255) ctTGCGCATTTTGATTGTTGACTGAGTAACCCGACAGTTTATGTGCACGATTTCCCCTCGCCCT‑AACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGc > 2:870292/1‑149 (MQ=255) ttGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCT‑AACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCg > 2:192652/1‑149 (MQ=255) ttGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCT‑AACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCg < 1:966126/149‑1 (MQ=255) tttGATTGTTGACTGAGTAACCAGACATTTGATGCGCACGATTGCCCCTCGCCCT‑AACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAgggg < 1:530986/149‑1 (MQ=255) ttGGTTGTTGCCTGAGTACCCAGACAGTTGATGTGCACGATTTCCCCTCGCCCT‑AACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAggggg < 1:1123588/149‑1 (MQ=255) aTTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCT‑AACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGa < 1:568105/149‑1 (MQ=255) ttgttgACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCAT‑AACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCCATTCTTTAAATATGGCGGTGAGCGGGGGAt > 2:462979/1‑149 (MQ=255) tgttgACTGAGTAACCAGACAGTTGATGTGCACGATTCCCCCTCGCCCT‑AACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTTCTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGAtt < 1:951792/149‑1 (MQ=255) aCTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCT‑AACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACtc > 2:1000196/1‑149 (MQ=255) tGAGTAACCAGGCAGTTGATGTGCACGATTTGCCGTAGCCCT‑AACAGACGTGGGCGGGGGCACCCGGTGTGTTCCATATACAAAAAAAAAGCCGGTAGTTTCGTCCAAGCGCTTCTTTAAAAATGGGGTGGAGGGGGGGATTGACccgc > 2:914635/1‑149 (MQ=255) gAGTAACTAGACAGTTTATGTGTACGATTTCCCCTCGCCCT‑AACATACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACtcgct < 2:855969/149‑1 (MQ=255) gTAAACAGATAGGTGATTTGCACGATTTCCCCCCGCACG‑AAAAGACGGGTGCGGGGGCACCAGGTGTGTGCAATATACGTAAAAAAAGCCCGTACTTTTGTACGAGCTCTTCTTTAAATATCGCGGTGAGGGGGGGATTGACtcgcttc < 2:533622/149‑1 (MQ=17) tAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCT‑AACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGc < 1:1204434/88‑1 (MQ=255) tAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCT‑AACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGc > 2:1204434/1‑88 (MQ=255) aaCCAGACAGTTGATGTGCACGATTTCCCCTCGCCCT‑AACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACtcgcttcgc < 1:679985/149‑1 (MQ=255) aCCAGACGGTTGATCTGCACGATTTCCCGTCGCCCT‑AACGGACGTGGGCGGGGGCACCCCGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCGCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACtcgcttcgct < 1:1110599/149‑1 (MQ=18) cAGACAGTTGATGTGCACGATTTCCCCTCGCCCT‑AACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGc < 1:669070/84‑1 (MQ=255) cAGACAGTTGATGTGCACGATTTCCCCTCGCCCT‑AACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGc > 2:669070/1‑84 (MQ=255) cAGACAGTTGATGTGCACGATTTCCCCTCGCCCT‑AACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTtcgctcg > 1:784870/1‑149 (MQ=255) gACAGTTGATGTGCACGATTTCCCCTCGCCCT‑AACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGcc < 2:150432/149‑1 (MQ=255) aCAGTTGATGTGCACGATTTCCCCTCGCCCT‑AACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGCGGGGGGGCTTCACTCCCTTCGCTCGccc > 2:116366/1‑149 (MQ=255) gtggATGTGCACGATTTCCCCTCGCCCT‑AACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGc < 2:213398/146‑1 (MQ=255) gTTGATGTGCACGATTTCCCCTCGCCCT‑AACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGc < 1:507059/149‑1 (MQ=255) gTTGAGGTGCACGATTTCCCCTCGCCCT‑AACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTTCTTTCGTACGAGCTCTTCTTTAAATATGGCGTTGAGGGGGTGATTGTCTCGCTTCGCTCGCCCTGc < 2:11432/149‑1 (MQ=18) ttGATGTGCACGATTTCCCCTCGCCCT‑AACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCg < 1:268275/149‑1 (MQ=255) ttGATGTGCACGATTTCCCCTCGCCCT‑AACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTACGTACGAGCCCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCCTCCCCTGCg > 1:1073411/1‑149 (MQ=21) tGATGTGCATGATTTCGCGCCGCCCT‑AACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCgg < 2:700083/149‑1 (MQ=255) cACGATTTCCCCTCGCCCT‑AACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCggg < 2:29425/143‑1 (MQ=255) cACGATTTCCCCTCGCCCT‑AACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCggg > 1:29425/1‑143 (MQ=255) cACGATTTCCCCTCGCCCT‑AACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGAGGAGAGccc > 2:667276/1‑149 (MQ=255) cACGATTTCCCCTCGCCCT‑AACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATAGGGCGGGGAGGGGGGGCTTGACTCGCTTCGCTCGCCGTGAGGGCAGccc > 1:365763/1‑149 (MQ=18) cTCGCCCT‑AACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGACAAACAGACCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGt > 1:1142084/1‑149 (MQ=255) tCGCCCT‑AACAGACGTGGGGGGGGGCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCTCCCTGCTGGCAGCCCGTTCACTGCGtt < 1:1176878/149‑1 (MQ=14) gCCCT‑AACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCa < 1:784363/149‑1 (MQ=255) cccT‑AACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGTGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCAc < 1:803698/149‑1 (MQ=255) ccT‑AACAGACGTGGGGGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACg < 2:36646/149‑1 (MQ=255) ccT‑AACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAggg > 2:25477/1‑96 (MQ=255) ccT‑AACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAggg < 1:25477/96‑1 (MQ=255) ccT‑AACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACg < 1:667276/149‑1 (MQ=255) aaaCAGCCGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGt < 1:203057/148‑1 (MQ=255) aGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACG‑AAAAAAAGCCCGGACTTTCGTACGAGCGCTTCTTTAAATATGGCGGTGAGGGGGGAATTGACTCGCTTCGCTCGCCCTGCGGGAAGCACAAACACAGCGGTCACGGGCTGTc > 1:158566/1‑149 (MQ=14) gACGTGGGCGGGGGCACCCGGTGTGGGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTc < 1:820251/149‑1 (MQ=255) aCGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACg > 2:62761/1‑141 (MQ=255) aCGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACg < 1:62761/141‑1 (MQ=255) tGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCCCTTCGCTCGCCCTCCGGGCAGCCCCCCCCCTGCGTTCCCGGTCtcgctccc > 2:238298/1‑142 (MQ=14) tggCGGGGTCACCTGGTGTGTGCAAAAAACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCCCTCACTGCGTTCACGGTCTGTCCAACt < 2:1190638/148‑1 (MQ=11) gggCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACt > 1:971531/1‑149 (MQ=38) ggCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACGCGCCTCGCTCGACCTGCGGGCAGCCCGCTCACCGCGTTCACGGCCTGTCCAACTg > 1:295127/1‑149 (MQ=11) gCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTgg < 1:17801/149‑1 (MQ=37) gCGGGGGCACCCGGTGGGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTgg < 1:486700/149‑1 (MQ=37) gggCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACtcgcttc < 2:590897/95‑1 (MQ=35) gggCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACtcgcttc > 1:590897/1‑95 (MQ=35) atatACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTATACAACAATCGTCGAGAGGGTGTGTTACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTTGCTGTCGCCAGTTGTCGAccccc > 1:895947/1‑149 (MQ=11) ccaaaaaaaaGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGACCCCCGGTCg < 1:156273/147‑1 (MQ=17) cGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGACCCCCGGTCg < 1:129315/149‑1 (MQ=32) aaaaaaaaGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGACCCCCGGTCggg < 1:773443/149‑1 (MQ=32) aGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGACCCCCGGTCGGGGCTtctc < 2:784870/149‑1 (MQ=32) | CCAGATAATACATATATGTTCTGTACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCT‑AACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGACCCCCGGTCGGGGCTTCTC > NC_000913_3_pae_pgi/1096848‑1097136 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |