| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913_3_pae_pgi | 1,677,492 | Δ1 bp | coding (412/1533 nt) | pntA ← | pyridine nucleotide transhydrogenase, alpha subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913_3_pae_pgi | 1,677,491 | 0 | C | . | 96.2% | 362.1 / 7.5 | 79 | coding (413/1533 nt) | pntA | pyridine nucleotide transhydrogenase, alpha subunit |
| Reads supporting (aligned to +/- strand): ref base C (1/2); new base . (37/39); total (38/41) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.74e-01 | |||||||||||
GACTGTTTGCTGCGCCAATGGCGGCCAGACCTGCAACACCCGCACCAATCACCATCACTTTTGCCGGTGGCACTTTCCCGGCCGCAGTAATTTGCCCGGTAAAGAAGCGCCCAAATTCATGTGCCGCTTCAACAATGGCGCGATAACCGGCGATGTTCGCCATCGAGCTTAGTGCGTCCAGCGATTGTGCGCGTGAGATACGCGGCACAGAGTCCATCGCCATCACGGTCACGTTACGTTCCGCAAGTTTTTGCATTAATTCCGGATTCTGCGCAGGCCAGATAAAACTCA > NC_000913_3_pae_pgi/1677345‑1677635 | gaCTGTTTGCTGCGCCAATGGCGGCCAGACCTGCAACACCCGCACCAATCACCATCACTTTTGCCGGTGGCACTTTCCCGGCCGCAGTAATTTGCCCGGTAAAGAAGCGCCCAAATTCATGTGCCGCTTCAACAATGGCGCGATAAcggc < 1:923211/150‑4 (MQ=255) ctgcGCCAATGGCGGCCAGACCTGCAACACCCGCACCAATCACCATCACTTTTGCCGGTGGCACTTTCCCGGCCGCAGTAATTTGCCCGGTAAAGAAGCGCCCAAATTCATGTGCCGCTTCAACAATGGCGCGATAA‑CGGCGATGTTCGc < 2:336750/150‑1 (MQ=255) cgcCAATGGCGGCCAGACCTGCAACACCCGCACCAATCACCATCACTTTTGCCGGTGGCACTTTCCCGGCCGCAGTAATTTGCCCGGTAAAGAAGCGCCCGAATTCATGTGCCGCTTCAACAATGGCGCGATAA‑CGGCGATGTTCGCCAt > 3:256499/1‑150 (MQ=255) gcCAATGGCGGCCAGACCTGCAACACCCGCACCAATCACCATCACTTTTGCCGGTGGCACTTTCCCGGCCGCAGTAATTTGCCCGGTAAAGAAGCGCCCAAATTCATGTGCCGCTTCAACAATGGCGCGATAA‑CGGCGATGTTCGCCATc > 1:6199/1‑150 (MQ=255) gcAATGGCTGCTCGACTTGCAACACCCGCACCAATCGCCATCACTTTTGCCGGTGGCACTTTCCCGGCCGCAGTAATTTGCCCGGTAAAGAAGCGCCCAAATTCATGTGCCGCTTCAACAATGGCGCGATAA‑CGGCGATGTTCGCCATCg < 4:406068/149‑1 (MQ=255) ccAATGGCGGCCAGACCTGCAACACCCGCGCCAATCACCATCACTTTTGCCGGTGGCACTTTCCCGGCCGCAGTAATTTGCCCGGTGAAGAAGCGCCCAAATTCATGTGCCGCTTCAACAATGGCGCGATAA‑CGGCGATGTTCGCCATCg < 2:746301/150‑1 (MQ=255) ccAATGGCGGCCAGACCTGCAACACCCGCACCAATCACCATCACTTTTGCCGGTGGCACTTTCCCGGCCGCAGTAATTTGCCCGGTAAAGAAGCGCCCAAATTCATGTGCCGCTTCAACAATGGCGCGATAA‑CGGCGATGTTCGCCATCg > 2:32711/1‑150 (MQ=255) cAATGGCGGCCAGACCTGCAACACCCGCACCAATCACCATCACTTTTGCCGGTGGCACTTTCCCGGCCGCAGTAATTTGCCCGGTAAAGAAGCGCCCAAATTCATGTGCCGCTTCAACAATGGCGCGATAA‑CGGCGATGTTCGCCATCGa > 1:1105664/1‑150 (MQ=255) cAATGGCGGCCAGACCTGCAACACCCGCACCAATCACCATCACTTTTGCCGGTGGCACTTTCCCGGCCGCAGTAATTTGCCCGGTAAAGAAGCGCCCAAATTCATGTGCCGCTTCAACAATGGCGCGATAA‑CGGCGATGTTCGCCATCGa > 4:9056/1‑150 (MQ=255) aaTGGCGGCCAGACCTGCAACACCCGCACCAATCACCATCACTTTTGCCGGTGGCACTTTCCCGGCCGCAGTAATTTGCCCGGTAAAGAAGCGCCCAAATTCATGTGCCGCTTCAACAATGGCGCGATAA‑CGGCGATGTTCGCCATCGAg > 3:495061/1‑150 (MQ=255) tGGCGGCCAGACCTGCAACACCCGCACCAATCACCATCACTTTTGCCGGTGGCACTTTCCCGGCCGCAGTAATTTGCCCGGTAAAGAAGCGCCCAAATTCATGTGCCGCTTCAACAATGGCGCGATAA‑CGGCGATGTTCGCCATCGAGCt < 2:1105664/150‑1 (MQ=255) gcggcCAGACCTGCAACACCCGCACCAATCACCATCACTTTTGCCGGTGGCACTTTCCCGGCCGCAGTAATTTGCCCGGTAAAGAAGCGCCCAAATTCATGTGCCGCTTCAACAATGGCGCGATAA‑CGGCGATGTTCGCCATCGAGCTTa > 3:434328/1‑150 (MQ=255) ggcCAGACCTGCAACACCCGCACCAATCACCATCACTTTTGCCGGTGGCACTTTCCCGGCCGCAGTAATTTGCCCGGTAAAGAAGCGCCCAAATTCATGTGCCGCTTCAACAATGGCGCGATAA‑CGGCGATGTTCGCCATCGAGCTTAGt > 1:1097752/1‑150 (MQ=255) ggcCAGACCTGCAACACCCGCACCAATCACCATCACTTTTGCCGGTGGCACTTTCCCGGCCGCAGTAATTTGCCCGGTAAAGAAGCGCCCAAATTCATGTGCCGCTTCAACAATGGCGCGATAA‑CGGCGATGTTCGCCATCGAGCTTAGt > 1:506198/1‑150 (MQ=255) aGACCTGCAACACCCGCACCAATCACCATCACTTTTGCCGGTGGCACTTTCCCGGCCGCAGTAATTTGCCCGGTAAAGAAGCGCCCAAATTCATGTGCCGCTTCAACAATGGCGCGATAA‑CGGCGATGTTCGCCATCGAGCTTAGTGCGt > 1:248225/1‑150 (MQ=255) ggccTGCAACACCCGCACCAATCACCATCACTTTTGCCGGTGGCACTTTCCCGGCCGCAGTAATTTGCCCGGTAAAGAAGCGCCCAAATTCATGTGCCGCTTCAACAATGGCGCGATAA‑CGGCGATGTTCGCCATCGAGCTTAGTGCGTc < 2:346241/148‑1 (MQ=255) gACCTGCAACACCCGCACCAATCACCATCACTTTTGCCGGTGGCACTTTCCCGGCCGCAGTAATTTGCCCGGTAAAGAAGCGCCCAAATTCATGTGCCGCTTCAACAATGGCGCGATAA‑CGGCGATGTTCGCCATCGAGCTTAGTGCGTc < 1:399712/150‑1 (MQ=255) gACCTGCAACACCCGCACCAATCACCAGCACTTTTGCCGGTGGCACTTTCCCGGCCGCAGTAATTTGCCCGGTAAAGAAGCGCCCAAATTCATGTGCCGCTTCAACAATGGCGCGATAA‑CGGCGATGTTCGCCATCGAGCTTAGTGCGTc < 1:1143923/150‑1 (MQ=255) cTGCAACACCCGCACCAATCACCATCACTTTTGCCGGTGGCACTTTCCCGGCCGCAGTAATTTGCCCGGTAAAGAAGCGCCCAAATTCATGTGCCGCTTCAACAATGGCGCGATAA‑CGGCGATGTTCGCCATCGAGCTTAGTGCGTCCAg < 2:546202/150‑1 (MQ=255) gCACCAATCACCATCACTTTTGCCGGTGGCACTTTCCCGGCCGCAGTAATTTGCCCGGTAAAGAAGCGCCCGAATTCATGTGCCGCTTCAACAATGGCGCGATAA‑CGGCGATGTTCGCCATCGAGCTTAGTGCGTCCAGCGATTGTgcgc < 4:256499/150‑1 (MQ=255) gCACCAATCACCATCACTTTTGCCGGTGGCACTTTCCCGGCCGCAGTAATTTGCCCGGTAAAGAAGCGCCCAAATTCATGTGCCGCTTCAACAATGGCGCGATAA‑CGGCGATGTTCGCCATCGAGCTTAGTGCGTCCAGCGATTGTgcgc > 2:987201/1‑150 (MQ=255) gCACCAATCACCATCACTTTTGCCGGTGGCACTTTCCCGGCCGCAGTAATTTGCCCGGTAAAGAAGCGCCCAAATTCATGTGCCGCTTCAACAATGGCGCGATAA‑CGGCGATGTTCGCCATCGAGCTTAGTGCGTCCAGCGATTGTgcgc < 2:271244/150‑1 (MQ=255) cACCAATCACCATCACTTTTGCCGGTGGCACTTTCCCGGCCGCAGTAATTTGCCCGGTAAAGAAGCGCCCAAATTCATGTGCCGCTTCAACAATGGCGCGATAA‑CGGCGATGTTCGCCATCGAGCTTAGTGCGTCCAGCGATTGTGcgcg > 3:176587/1‑150 (MQ=255) aCCAATCACCATCACTTTTGCCGGTGGCACTTTCCCGGCCGCAGTAATTTGCCCGGTAAAGAAGCGCCCAAATTCATGTGCCGCTTCAACAATGGCGCGATAA‑CGGCGATGTTCGCCATCGAGCTTAGTGCGTCCAGCGATTGTGCGCGt < 2:1097752/150‑1 (MQ=255) aCCAATCACCATCACTTTTGCCGGTGGCACTTTCCCGGCCGCAGTAATTTGCCCGGTAAAGAAGCGCCCAAATTCATGTGCCGCTTCAACAATGGCGCGATAA‑CGGCGATGTTCGCCATCGAGCTTAGTGCGTCCAGCGATTGTGCGCGt < 2:506198/150‑1 (MQ=255) ccAATCACCATCACTTTTGCCGGTGGCACTTTCCCGGCCGCAGTAATTTGCCCGGTAAAGAAGCGCCCAAATTCATGTGCCGCTTCAACAATGGCGCGATAACCGGCGATGTTCGCCATCGAGCTTAGTGCGTCCAGCGATTGTGCGCGt < 1:718210/150‑1 (MQ=255) aTCACCATCACTTTTGCCGGTGGCACTTTCCCGGCCGCAGTAATTTGCCCGGTAAAGAAGCGCCCAAATTCATGTGCCGCTTCAACAATGGCGCGATAA‑CGGCGAt > 3:637553/1‑106 (MQ=255) aTCACCATCACTTTTGCCGGTGGCACTTTCCCGGCCGCAGTAATTTGCCCGGTAAAGAAGCGCCCAAATTCATGTGCCGCTTCAACAATGGCGCGATAA‑CGGCGAt < 4:637553/106‑1 (MQ=255) tCACCATCACTTTTGCCGGTGGCACTTTCCCGGCCGCAGTAATTTGCCCGGTAAAGAAGCGCCCAAATTCATGTGCCGCTTCAACAATGGCGCGATAA‑CGGCGATGTTCGCCATCGAGCTTAGTGCGTCCAGCGATTGTGCGCGTGAGAt > 3:652884/1‑150 (MQ=255) aCCATCACTTTTGCCGGTGGCACTTTCCCGGCCGCAGTAATTTGCCCGGTAAAGAAGCGCCCAAATTCATGTGCCGCTTCAACAATGGCGCGATAA‑CGGCGATGTTCGCCATCGAGCTTAGTGCGTCCAGCGATTGTGCGCGTGAGATAc > 3:454059/1‑150 (MQ=255) ccATCACTTTTGCCGGTGGCACTTTCCCGGCCGCAGTAATTTGCCCGGTAAAGAAGCGCCCAAATTCATGTGCCGCTTCAACAATGGCGCGATAA‑CGGCGATGTTCGCCATCGAGCTTAGTGCGTCCAGCGATTGTGCGCGTGAGATAcg > 4:599343/1‑150 (MQ=255) cATCACTTTTGCCGGTGGCACTTTCCCGGCCGCAGTAATTTGCCCGGTAAAGAAGCGCCCAAATTCATGTGCCGCTTCAACAATGGCGCGATAA‑CGGCGATGTTCGCCATCGAGCTTAGTGCGTCCAGCGATTGTGCGCGTGAGATAcgc < 2:248225/150‑1 (MQ=255) aTCACTTTTGCCGGTGGCACTTTCCCGGCCGCAGTAATTTGCCCGGTAAAGAAGCGCCCAAATTCATGTGCCGCTTCAACAATGGCGCGATAA‑CGGCGATGTTCGCCATCGAGCTTAGt > 4:340515/1‑119 (MQ=255) aTCACTTTTGCCGGTGGCACTTTCCCGGCCGCAGTAATTTGCCCGGTAAAGAAGCGCCCAAATTCATGTGCCGCTTCAACAATGGCGCGATAA‑CGGCGATGTTCGCCATCGAGCTTAGt < 3:340515/119‑1 (MQ=255) aTCACTTTTGCCGGTGGCACTTTCCCGGCCGCAGTAATTTGCCCGGTAAAGAAGCGCCCAAATTCATGTGCCGCTTCAACAATGGCGCGATAA‑CGGCGATGTTCGCCATCGAGCTTAGTGCGTCCAGCGATTGTGCGCGTGAGATAcgcg > 4:487423/1‑150 (MQ=255) aTCACTTTTGCCGGTGGCACTTTCCCGGCCGCAGTAATTTGCCCGGTAAAGAAGCGCCCAAATTCATGTGCCGCTTCAACAATGGCGCGATAA‑CGGCGATGTTCGCCATCGAGCTTAGTGCGTCCAGCGATTGTGCGCGTGAGATAcgcg < 3:9056/150‑1 (MQ=255) tCACTTTTGCCGGTGGCACTTTCCCGGCCGCAGTAATTTGCCCGGTAAAGAAGCGCCCAAATTCATGTGCCGCTTCAACAATGGCGCGATAA‑CGGCGATGTTCGCCATCGAGCTTAGTGCGTCCAGCGATTGTGCGCGTGAGATACGCgg > 4:654308/1‑150 (MQ=255) ttttGCCGGTGGCACTTTCCCGGCCGCAGTAATTTGCCCGGTAAAGAAGCGCCCAAATTCATGTGCCGCTTCAACAATGGCGCGATAA‑CGGCGATGtt < 4:34927/98‑1 (MQ=255) ttttGCCGGTGGCACTTTCCCGGCCGCAGTAATTTGCCCGGTAAAGAAGCGCCCAAATTCATGTGCCGCTTCAACAATGGCGCGATAA‑CGGCGATGtt > 3:34927/1‑98 (MQ=255) tttGCCGGTGGCACTTTCCCGGCCGCAGTAATTTGCCCGGTAAAGAAGCGCCCAAATTCATGTGCCGCTTCAACAATGGCGCGATAA‑CGGCGATGTTCGCCATCGAGCTTAGTGCGTCCAGCGATTGTGCGCGTGAGATACGCGGCACag < 1:192035/150‑1 (MQ=255) ccGGTGGCACTTTCCCGGCCGCAGTAATTTGCCCGGTAAAGAAGCGCCCAAATTCATGTGCCGCTTCAACAATGGCGCGATAA‑CGGCGATGTTCGCCATCGAGCTTAGTGCGTCCAGCGATTGTGCGCGTGAGATACGCGGCACAGAGTc < 2:1126105/150‑1 (MQ=255) aCTTTCCCGGCCGCAGTAATTTGCCCGGTAAAGAAGCGCCCAAATTCATGTGCCGCTTCAACAATGGCGCGATAA‑CGGCGATGTTCGCCATCGAGCTTAGTGCGTCCAGCGATTGTGCGCGTGAGATACGCGGCACAGAGTCCATCGCCa < 4:728/150‑1 (MQ=255) ttCCCGGCCGCAGTAATTTGCCCGGTAAAGAAGCGCCCAAATTCATGTGCCGCTTCAACAATGGCGCGATAA‑CGGCGATGTTCGCCATCGAGCTTAGTGCGTCCAGCGATTGTGCGCGTGAGATACGCGGCACAGAGTCCATCGCCATCa < 4:319373/150‑1 (MQ=255) ccGGCCGCAGTAATTTGCCCGGTAAAGAAGCGCCCAAATTCATGTGCCGCTTCAACAATGGCGCGATAA‑CGGCGATGTTCGCCATCGAGCTTAGTGCGTCCAGCGATTGTGCGCGTGAGATACGCGGCACAGAGTCCATCGCCATCACgg > 4:386760/1‑150 (MQ=255) ccGCAGTAATTTGCCCGGTAAAGAAGCGCCCAAATTCATGTGCCGCTTCAACAATGGCGCGATAA‑CGGCGATGTTCGCCATCGAGCTTAGTGCGTCCAGCGATTGTGCGCGTGAGATACGCGGCACAGAGTCCATCGCCATCACGGTCac < 2:103645/150‑1 (MQ=255) gCAGTAATTTGCCCGGTAAAGAAGCGCCCAAATTCATGTGCCGCTTCAACAATGGCGCGATAA‑CGGCGATGTTCGCCATCGAGCTTAGTGCGTCCAGCGATTGTGCGCGTGAGATACGCGGCACAGAGTCCATCGCCATCACGGTCacgt > 1:1113708/1‑150 (MQ=255) gTAATTTGCCCGGTAAAGAAGCGCCCAAATGCATGTGCCGCTTCAACAATGGCGCGATAA‑CGGCGATGTTCGCCATCGAGCTTAGTGCGTCCAGCGATTGTGCGCGTGAGATACGCGGCACAGAGTCCATCGCCATCACGGTCacgttac < 2:288752/150‑1 (MQ=255) tAATTTGCCCGGTAAAGAAGCGCCCAAATTCATGTGCCGCTTCAACAATGGCGCGATAA‑CGGCGATGTTCGCCATCGAGCTTAGTGCGTc > 4:269442/1‑90 (MQ=255) tAATTTGCCCGGTAAAGAAGCGCCCAAATTCATGTGCCGCTTCAACAATGGCGCGATAA‑CGGCGATGTTCGCCATCGAGCTTAGTGCGTc < 3:269442/90‑1 (MQ=255) aaTTTGCCCGGTAAAGAAGCGCCCAAATTCATGTGCCGCTTCAACAATGGCGCGATAA‑CGGCGATGTTCGCCATCGAGCTTAGTGCGTCCAGCGATTGTGCGCGTGAGATACGCGGCACAGAGTCCATCGCCATCACGGTCacgttacgt > 4:153588/1‑150 (MQ=255) tGCCCGGTAAAGAAGCGCCCAAATTCATGTGCCGCTTCAACAATGGCGCGATAA‑CGGCGATGTTCGCCATCGAGCTTAGTGCGTCCAGCGATTGTGCGCGTGAGATACGCGGCACAGAGTCCATCGCCATCACGGTCACGTTACGTTCCg < 2:79132/150‑1 (MQ=255) ccGGTAAAGAAGCGCCCAAATTCATGTGCCGCTTCAACAATGGCGCGATAA‑CGGCGATGTTCGCCATCGAGCTTAGTGCGTCCAGCGATTGTGCGCGTGAGATACGCGGCACAGAGTCCATCGCCATCACGGTCACGTTACGTTCCGCaa < 1:76614/150‑1 (MQ=255) cGGTAACGAAGCGCCCAAATTCATGTGCCGCTTCAACAATGGCGCGATAACCGGCGATGTTCGCCATCGAGCTTAGTGCGTCCAGCGATTGTGCGCGTGAGATACGCGGCACAGAGTCCATCGCCATCACGGTCACGTTACGTTcc > 4:558030/1‑146 (MQ=255) cGGTAAAGAAGCGCCCAAATTCATGTGCCGCTTCAACAATGGCGCGATAACCGGCGATGTTCGCCATCGAGCTTAGTGCGTCCAGCGATTGTGCGCGTGAGATACGCGGCACAGAGTCCATCGCCATCACGGTCACGTTACGTTcc < 3:558030/146‑1 (MQ=255) gttacgcCCAAATCCAAGTGCAGCTTCAACAATCGCGCGATAA‑CGGCGATGTCGCCCGGCGAGCTTCGTGCGGCCAGCGATTGTCCGCGTGAGATACGCGGCACAGAGTACATCGCCTTCACGGTCACGTTACGTTCCCCCAGATGTTGc > 2:467953/5‑150 (MQ=255) gaagCGCCCAAATTCATGTGCCGCTTCAACAATGGCGCGATAA‑CGGCGATGTTCGCCATCGAGCTTAGt > 2:713643/1‑69 (MQ=255) gaagCGCCCAAATTCATGTGCCGCTTCAACAATGGCGCGATAA‑CGGCGATGTTCGCCATCGAGCTTAGt < 1:713643/69‑1 (MQ=255) gaagCGCCCAAATTCATGTGCCGCTTCAACAATGGCGCGATAA‑CGGCGATGTTCGCCATCGAGCTTAGTGCGTCCAGCGATTGTGCGCGTGAGATACGCGGCACAGAGTCCATCGCCATCACGGTCACGTTACGTTCCGCAAGTTTTTGc < 4:309001/150‑1 (MQ=255) gcgcCCAAATTCATGTGCCGCTTCAACAATGGCGCGATAA‑CGGCGATGTTCGCCATCGAGCTTAGTGCGTCCAGCGATTGTGCGCGTGAGATACGCGGCACAGAGTCCATCGCCATCACGGTCACGTTACGTTCCGCAAGTTTTTGCAtt < 4:82208/150‑1 (MQ=255) accccAAATTCATGTGCCGCTTCAACAATGGCGCGATAA‑CGGCGATGTTCGCCATCGAGCTTAGTGCGTCCAGCGATTGTGCGCGTGAGATACGCGGCACAGAGTCCATCGCCATCACGGTCACGTTACGTTCCGCAAGTTTTTGCATTa < 4:410079/148‑1 (MQ=255) cccAAATTCATGTGCCGCTTCAACAATGGCGCGATAA‑CGGCGATGTTCGCCATCGAGCTTAGTGCGTCCAGCGATTGTGCGCGTGAGATACGCGGCACAGAGTCCATCGCCATCACGGTCACGTTACGTTCCGCAAGTTTTTGCATTAAt < 1:482928/150‑1 (MQ=255) cccAAATTCATGTGCCGCTTCAACAATGGCGCGATAA‑CGGCGATGTTCGCCATCGAGCTTAGTGCGTCCAGCGATTGTGCGCGTGAGATACGCGGCACAGAGTCCATCGCCATCACGGTCACGTTACGTTCCGCAAGTTTTTGCATTAAt > 4:731412/1‑150 (MQ=255) ccAAATTCATGTGCCGCTTCAACAATGGCGCGATAA‑CGGCGATGTTCGCCATCGAGCTTAGTGCGTCCAGCGATTGTGCGCGTGAGATACGCGGCACAGAGTCCATCGCCATCACGGTCACGTTACGTTCCGCAAGTTTTTGCATTAAtt > 3:536783/1‑150 (MQ=255) cAAATTCATGTGCCGCTTCAACAATGGCGCGATAA‑CGGCGATGTTCGCCATCGAGCTTAGTGCGTCCAGCGATTGTGCGCGTGAGATACGCGGCACAGAGTCCATCGCCATCACGGTCACGTTACGTTCCGCAAGTTTTTGCATTAATTc > 1:487246/1‑150 (MQ=255) cAAATTCATGTGCCGCTTCAACAATGGCGCGATAA‑CGGCGATGTTCGCCATCGAGCTTAGTGCGTCCAGCGATTGTGCGCGTGAGATACGCGGCACAGAGTCCATCGCCATCACGGTCACGTTACGTTCCGCAAGTTTTTGCATTAATTc > 2:800693/1‑150 (MQ=255) ttCATGTGCCGCTTCAACAATGGCGCGATAA‑CGGCGATGTTCGCCATCGAGCTTAGTGCGTCCAGCGATTGTGCGCGTGAGATACGCGGCACAGAGTCCATCGCCATCACGGTCACGTTACGTTCCGCAAGTTTTTGCATTAATTCCGGa > 3:512260/1‑150 (MQ=255) cATGTGCCGCTTCAACAATGGGGCGATAA‑CGGCGATGTTCGCCATCGAGCTTAGTGCGTCCAGCGATTGTGCGCGTGAGATACGCGGCACAGAGTCCATCGCCATCACGGTCACGTTACGTTCCGCAAGTTTTTGCATTAATTCCGGAtt < 4:25332/150‑1 (MQ=255) aTGTGCCGCTTCAACAATGGCGCGATAA‑CGGCGATGTTCGCCATCGAGCTTAGTGCGTCCAGCGATTGTGCGCGTGAGATACGCGGCACAGAGTCCATCGCCATCACGGTCACGTTACGTTCCGCAAGTTTTTGCATTAATTCCGGATTc > 1:831417/1‑150 (MQ=255) gtgCCGCTTCAACAATGGCGCGATAA‑CGGCGATGTTCGCCATCGAGCTTAGTGCGTCCAGCGATTGTGCGCGTGAGATACGCGGCACAGAGTCCATCGCCATCACGGTCACGTTACGTTCCGCAAGTTTTTGCATTAATTCCGGATTCTg < 2:1100342/150‑1 (MQ=255) tgCCGCTTCAACAATGGCGCGATAA‑CGGCGATGTTCGCCATCGAGCTTAGTGCGTCCAGCGATTGTGCGCGTGAGATACGCGGCACAGAGTCCATCGCCATCACGGTCACGTTACGTTCCGCAAGTTTTTGCATTAATTCCGGATTCTgc > 1:539372/1‑150 (MQ=255) gCTTCAACAATGGCGCGATAA‑CGGCGATGTTCGCCATCGAGCTTAGTGCGTCCAGCGATTGTGCGCGTGAGATACGCGGCACAGAGTCCATCGCCATCACGGTCACGTTACGTTCCGCAAGTTTTTGCATTAATTCCGGATTCTGCGCAg > 4:2531/1‑150 (MQ=255) caacaaTGGCGCGATAA‑CGGCGATGTTCGCCATCGAGCTTAGTGCGTCCAGCGATTGTGCGCGTGAGATACGCGGCACAGAGTCCATCGCCATCACGGTCACGTTACGTTCCGCAAGTTTTTGCATTAATTCCGGATTCTGCGCAGGCCa < 2:487246/150‑1 (MQ=255) aacaaTGGCGCGATAA‑CGGCGATGTTCGCCATCGAGCTTAGTGCGTCCAGCGATTGTGCGCGTGAGATACGCGGCACAGAGTCCATCGCCATCACGGTCACGTTACGTTCAGCAAGTTTTTGCATTAATTCCGGATTCTGCGCAGGCCAg > 3:623454/1‑150 (MQ=255) aaTGGCGCGATAA‑CGGCGATGTTCGCCATCGAGCTTAGTGCGTCCAGCGATTGTgc < 2:513076/56‑1 (MQ=255) aaTGGCGCGATAA‑CGGCGATGTTCGCCATCGAGCTTAGTGCGTCCAGCGATTGTgc > 1:513076/1‑56 (MQ=255) ggCGCGATAA‑CGGCGATGTTCGCCATCGAGCTTAGTGCGTCCAGCGATTGTGCGCGTGAGATACGCGGCACAGAGTCCATCGCCATCACGGTCACGTTACGTTCCGCAAGTTTTTGCATTAATTCCGGATTCTGCGCAGGCCAGATaaaa < 3:113123/150‑1 (MQ=255) ggCGCGATAA‑CGGCGATGTTCGCCATCGAGCTTAGTGCGTCCAGCGATTGTGCGCGTGAGATACGCGGCACAGAGTCCATCGCCATCACGGTCACGTTACGTTCCGCAAGTTTTTGCATTAATTCCGGATTCTGCGCAGGCCAGATaaaa < 4:454059/150‑1 (MQ=255) ggCGCGATAA‑CGGCGATGTTCGCCATCGAGCTTAGTGCGTCCAGCGATTGTGCGCGTGAGATACGCGGCACAGAGTCCATCGCCATCACGGTCACGTTACGTTCCGCAAGTTTTTGCATTAATTCCGGATTCTGCGCAGGCCAGATaaaa < 3:654308/150‑1 (MQ=255) gcgcGATAA‑CGGCGATGTTCGCCATCGAGCTTAGTGCGTCCAGCGATTGTGCGCGTGAGATACGCGGCACAGAGTCCATCGCCATCACGGTCACGTTACGTTCCGCAAGTTTTTGCATTAATTCCGGATTCTGCGCAGGCCAGATAAAAc > 4:600907/1‑150 (MQ=255) cgATAA‑CGGCGATGTTCGCCATCGAGCTTAGTGCGTCCAGCGATTGTGCGCGTGAGATACGCGGCACAGAGTCCATCGCCATCACGGTCACGTTACGTTCCGCAAGTTTTTGCATTAATTCCGGATTCTGCGCAGGCCAGATAAAACTCa < 4:176587/150‑1 (MQ=255) | GACTGTTTGCTGCGCCAATGGCGGCCAGACCTGCAACACCCGCACCAATCACCATCACTTTTGCCGGTGGCACTTTCCCGGCCGCAGTAATTTGCCCGGTAAAGAAGCGCCCAAATTCATGTGCCGCTTCAACAATGGCGCGATAACCGGCGATGTTCGCCATCGAGCTTAGTGCGTCCAGCGATTGTGCGCGTGAGATACGCGGCACAGAGTCCATCGCCATCACGGTCACGTTACGTTCCGCAAGTTTTTGCATTAATTCCGGATTCTGCGCAGGCCAGATAAAACTCA > NC_000913_3_pae_pgi/1677345‑1677635 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |