| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913_3_pae_pgi | 1,677,492 | Δ1 bp | coding (412/1533 nt) | pntA ← | pyridine nucleotide transhydrogenase, alpha subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913_3_pae_pgi | 1,677,491 | 0 | C | . | 94.2% | 384.9 / 17.6 | 87 | coding (413/1533 nt) | pntA | pyridine nucleotide transhydrogenase, alpha subunit |
| Reads supporting (aligned to +/- strand): ref base C (1/4); new base . (39/43); total (40/47) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.69e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.51e-01 | |||||||||||
CGAGACTGTTTGCTGCGCCAATGGCGGCCAGACCTGCAACACCCGCACCAATCACCATCACTTTTGCCGGTGGCACTTTCCCGGCCGCAGTAATTTGCCCGGTAAAGAAGCGCCCAAATTCATGTGCCGCTTCAACAATGGCGCGATAACCGGCGATGTTCGCCATCGAGCTTAGTGCGTCCAGCGATTGTGCGCGTGAGATACGCGGCACAGAGTCCATCGCCATCACGGTCACGTTACGTTCCGCAAGTTTTTGCATTAATTCCGGATTCTGCGCAGGCCAGATAAAA > NC_000913_3_pae_pgi/1677342‑1677631 | cGAGACTGTTTGCTGCGCCAATGGCGGCCAGACCTGCAACACCCGCACCAATCACCATCACTTTTGCCGGTGGCACTTTCCCGGCCGCAGTAATTTGCCCGGTAAAGAAGCGCCCAAATTCATGTGCCGCTTCAACAATGGCGCGATAAc > 2:389927/1‑150 (MQ=255) gaCTGTTTGCTGCGCCAATGGCGGCCAGACCTGCAACACCCGCACCAATCACCATCACTTTTGCCGGTGGCACTTTCCCGGCCGCAGTAATTTGCCCGGTAAAGAAGCGCCCAAATTCATGTGCCGCTTCAACAATGGCGCGATAAcggc < 4:563866/150‑4 (MQ=255) gaCTGTTTGCTGCGCCAATGGCGGCCAGACCTGCAACACCCGCACCAATCACCATCACTTTTGCCGGTGGCACTTTCCCGGCCGCAGTAATTTGCCCGGTAAAGAAGCGCCCAAATTCATGTGCCGCTTCAACAATGGCGCGATAACCgg < 3:252708/150‑1 (MQ=255) gaCTGTTTGCTGCGCCAATGGCGGCCAGACCTGCAACACCCGCACCAATCACCATCACTTTTGCCGGTGGCACTTTCCCGGCCGCAGTAATTTGCCCGGTAAAGAAGCGCCCAAATTCATGTGCCGCTTCAACAATGGCGCGATAACCgg < 1:446847/150‑1 (MQ=255) tGTTTGCTGCGCCAATGGCGGCCAGACCTGCAACACCCGCACCAATCACCATCACTTTTGCCGGTGGCACTTTCCCGGCCGCAGTAATTTGCCCGGTAAAGAAGCGCCCAAATTCATGTGCCGCTTCAACAATGGCGCGATAA‑CGGCGAt > 4:300764/1‑150 (MQ=255) gctgcGCCAATGGCGGCCAGACCTGCAACACCCGCACCAATCACCATCACTTTTGCCGGTGGCACTTTCCCGGCCGCAGTAATTTGCCCGGTAAAGAAGCGCCCAAATTCATGTGCCGCTTCAACAATGGCGCGATAA‑CGGCGATGTTCg < 1:389927/150‑1 (MQ=255) tgcGCCAATGGCGGCCAGACCTGCAACACCCGCACCAATCACCATCACTTTTGCCGGTGGCACTTTCCCGGCCGCAGTAATTTGCCCGGTAAAGAAGCGCCCAAATTCATGTGCCGCTTCAACAATGGCGCGATAA‑CGGCGATGTTCGcc > 3:241308/1‑150 (MQ=255) tgcGCCAATGGCGGCCAGACCTGCAACACCCGCACCAATCACCATCACTTTTGCCGGTGGCACTTTCCCGGCCGCAGTAATTTGCCCGGTAAAGAAGCGCCCAAATTCATGTGCCGCTTCAACAATGGCGCGATAA‑CGGCGATGTTCGcc > 3:521204/1‑150 (MQ=255) tgcGCCAATGGCGGCCAGACCTGCAACACCCGCACCAATCACCATCACTTTTGCCGGTGGCACTTTCCCGGCCGCAGTAATTTGCCCGGTAAAGAAGCGCCCAAATTCATGTGCCGCTTCAACAATGGCGCGATAA‑CGGCGATGTTCGcc > 4:118224/1‑150 (MQ=255) tgcGCCAATGGCGGCCAGACCTGCAACACCCGCACCAATCACCATCACTTTTGCCGGTGGCACTTTCCCGGCCGCAGTAATTTGCCCGGTAAAGAAGCGCCCAAATTCATGTGCCGCTTCAACAATGGCGAGATAA‑CGGCGATGTTCGcc > 1:65483/1‑150 (MQ=255) cAATGGCGGCCAGACCTGCAACACCCGCACCAATCACCATCACTTTTGCCGGTGGCACTTTCCCGGCCGCAGTAATTTGCCCGGTAAAGAAGCGCCCAAATTCATGTGCCGCTTCAACAATGGCGCGATAA‑CGGCGATGTTCGCCATCGa > 3:745703/1‑150 (MQ=255) aaTGGCGGCCAGACCTGCAACACCCGCACCAATCACCATCACTTTTGCCGGTGGCACTTTCCCGGCCGCAGTAATTTGCCCGGTAAAGAAGCGCCCAAATTCATGTGCCGCTTCAACAATGGCGCGATAA‑CGGCGATGTTCGCCATCGAg < 4:618430/150‑1 (MQ=255) aTGGCGGCCAGACCTGCAACACCCGCACCAATCACCATCACTTTTGCCGGTGGCACTTTCCCGGCCGCAGTAATTTGCCCGGTAAAGAAGCGCCCAAATTCATGTGCCGCTTCAACAATGGCGCGATAA‑CGGCGATGTTCGCCATCGAGc < 2:298473/150‑1 (MQ=255) gcggcCAGACCTGCAACACCCGCACCAATCACCATCACTTTTGCCGGTGGCACTTTCCCGGCCGCAGTAATTTGCCCGGTAAAGAAGCGCCCAAATTCATGTGCCGCTTCAACAATGGCGCGATAA‑CGGCGATGTTCGCCATCGAGCTTa > 1:534398/1‑150 (MQ=255) cggcCAGACCTGCAACACCCGCACCAATTGCTATCACTCTAGCCGGTGACACTTTCACGGACGCAGTAATTTGCCCGGTAAAAAAGCGCCCAATAAAATGTTCCTCTTCAACAATAGCGCGATAA‑CGGCGATGTTCGCCATCGAgataaa > 4:212957/1‑145 (MQ=255) ggcCAGACCTGCAACACCCGCACCAATCACCATCACTTTTGCCGGTGGCACTTTCCCGGCCGCAGTAATTTGCCCGGTAAAGAAGCGCCCAAATTCATGTGCCGCTTCAACAATGGCGCGATAA‑CGGCGATGTTCGCCATCGAGCTTAGt < 2:1196786/150‑1 (MQ=255) cAGACCTGCAACACCCGCACCAATCACCATCACTTTTGCCGGTGGCACTTTCCCGGCCGCAGTAATTTGCCCGGTAAAGAAGCGCCCAAATTCATGTGCCGCTTCAACAATGGCGCGATAA‑CGGCGATGTTCGCCATCGAGCTTAGTGCg > 3:473759/1‑150 (MQ=255) aGACCTGCAACACCCGCACCAATCACCATCACTTTTGCCGGTGGCACTTTCCCGGCCGCAGTAATTTGCCCGGTAAAGAAGCGCCCAAATTCATGTGCCGCTTCAACAATGGCGCGATAA‑CGGCGATGTTCGCCATCGAGCTTAGt < 2:431176/146‑1 (MQ=255) aGACCTGCAACACCCGCACCAATCACCATCACTTTTGCCGGTGGCACTTTCCCGGCCGCAGTAATTTGCCCGGTAAAGAAGCGCCCAAATTCATGTGCCGCTTCAACAATGGCGCGATAA‑CGGCGATGTTCGCCATCGAGCTTAGt > 1:431176/1‑146 (MQ=255) gACCTGCACCACCCGCACCAATCACCATCACTTTTGCCGGTGGCACTTTCCCGGCCGCAGTAATTTGCCCGGTAAAGAAGCGCCCAAATTCATGTGCCGCTTCAACAATGGCGCGATAA‑CGGCGATGTTCGCCATCGAGCTTAGTGCGTc < 2:93758/150‑1 (MQ=255) gACCTGCAACACCCGCACCAATCACCATCACTTTTGCCGGTGGCACTTTCCCGGCCGCAGTAATTTGCCCGGTAAAGAAGCGCCCAAATTCATGTGCCGCTTCAACAATGGCGCGATAA‑CGGCGATGTTCGCCATCGAGCTTAGTGCGTc < 3:731718/150‑1 (MQ=255) aCCTGCAACACCCGCACCAATCACCATCACTTTTGCCGGTGGCACTTTCCCGGCCGCAGTAATTTGCCCGGTAAAGAAGCGCCCAAATTCATGTGCCGCTTCAACAATGGCGCGATAA‑CGGCGATGTTCGCCATCGAGCTTAGTGCGTcc < 1:533759/150‑1 (MQ=255) cTGCAACACCCGCACCAATCACCATCACTTTTGCCGGTGGCACTTTCCCGGCCGCAGTAATTTGCCCGGTAAAGAAGCGCCCAAATTCATGTGCCGCTTCAACAATGGCGCGATAA‑CGGCGATGTTCGCCATCGAGCTTAGTGCGTCCAg < 3:141125/150‑1 (MQ=255) gCAACACCCGCACCAATCACCATCACTTTTGCCGGTGGCACTTTCCCGGCCGCAGTAATTTGCCCGGTAAAGAAGCGCCCAAATTCATGTGCCGCTTCAACAATGGCGCGATAA‑CGGCGATGTTCGCCATCGAGCTTAGTGCGTCCAGCg > 2:1058158/1‑150 (MQ=255) aaCACCCGCACAAATCACCTGCGCTTTTGCCGGTGGCACTTTCCCGGCCGCAGTAATTTGCCCGGTAAAGAAGCGCCCAAATTCATGTGCCGCTTCAACAATGGCGCGATAA‑CGGCGATGTTCGCCATCGAGCTTAGTGCGTCCAGCGAt < 2:443403/150‑1 (MQ=255) ccGCACCAATCACCATCACTTTTGCCGGTGGCACTTTCCCGGCCGCAGTAATTTGCCCGGTAAAGAAGCGCCCAAATTCATGTGCCGCTTCAACAATGGCGCGATAA‑CGGCGATGTTCGCCATCGAGCTTAGTTCGTCCAGCGATTGTgc > 2:333368/1‑150 (MQ=255) ccGCACCAATCACCATCACTTTTGCCGGTGGCACTTTCCCGGCCGCAGTAATTTGCCCGGTAAAGAAGCGCCCAAATTCATGTGCCGCTTCAACAATGGCGCGATAA‑CGGCGATGTTCGCCATCGAGCTTAGTGCGTCCAGCGATTGTgc > 2:928936/1‑150 (MQ=255) gCACCAATCACCATCACTTTTGCCGGTGGCACTTTCCCGGCCGCAGTAATTTGCCCGGTAAAGAAGCGCCCAAATTCATGTGCCGCTTCAACAATGGCGCGATAA‑CGGCGATGTTCGCCATCGAGCTTAGTGCGTCCAGCGATTGTgcgc < 1:928936/150‑1 (MQ=255) gCACCAATCACCATCACTTTTGCCGGTGGCACTTTCCCGGCCGCAGTAATTTGCCCGGTAAAGAAGCGCCCAAATTCATGTGCCGCTTCAACAATGGCGCGATAA‑CGGCGATGTTCGCCATCGAGCTTAGTGCGTCCAGCGATTGTgcgc < 4:246010/150‑1 (MQ=255) gCACCAATCACCATCACTTTTGCCGGTGGCACTTTCCCGGCCGCAGTAATTTGCCCGGTAAAGAAGCGCCCAAATTCATGTGCCGCTTCAACAATGGCGCGATAA‑CGGCGATGTTCGCCATCGAGCTTAGTGCGTCCAGCGATTGTgcgc > 3:246010/1‑150 (MQ=255) gCACCAATCACCATCACTTTTGCCGGTGGCACTTTCCCGGCCGCAGTAATTTGCCCGGTAAAGAAGCGCACAAATTCATGTGCCGCTTCAACAATGGCGCGATAA‑CGGCGATGTTCGCCATCGAGCTTAGTGCGTCCAGCGATTGTgtgc < 3:452550/150‑1 (MQ=255) cccAATCACCATCACTTTTGCCGGTGGCACTTTCCCGGCCGCAGTAATTTGCCCGGTAAAGAAGCGCCCAAATTCATGTGCCGCTTCAACAATGGCGCGATAA‑CGGCGATGTTCGCCATCGAGCTTAGTGCGTCCAGCGATTGTGCGCGt < 1:1021668/149‑1 (MQ=255) aCCAATCACCATCACTTTTGCCGGTGGCACTTTCCCGGCCGCAGTAATTTGCCCGGTAAAGAAGCGCCCAAATTCATGTGCCGCTTCAACAATGGCGCGATAA‑CGGCGATGTTCGCCATCGAGCTTAGTGCGTCCAGCGATTGTGCGCGt < 1:1150363/150‑1 (MQ=255) aCCAATCACCATCACTTTTGCCGGTGGCACTTTCCCGGCCGCAGTAATTTGCCCGGTAAAGAAGCGCCCAAATTCATGTGCCGCTTCAACAATGGCGCGATAA‑CGGCGATGTTCGCCATCGAGCTTAGTGCGTCCAGCGATTGTGCGCGt < 4:521204/150‑1 (MQ=255) aCCAATCACCATCACTTTTGCCGGTGGCACTTTCCCGGCCGCAGTAATTTGCCCGGTAAAGAAGCGCCCAAATTCATGTGCCGCTTCAACAATGGCGCGATAA‑CGGCGATGTTCGCCATCGAGCTTAGTGCGTCCAGCGATTGTGCGCGt < 1:25883/150‑1 (MQ=255) cAATCACCATCACTTTTGCCGGTGGCACTTTCCCGGCCGCAGTAATTTGCCCGGTAAAGAAGCGCCCAAATTCATGTGCCGCTTCAACAATGGCGCGATAA‑CGGCGATGTTCGCCATCGAGCTTAGTGCGTCCAGCGATTGTGCGCGTga < 1:136854/150‑1 (MQ=255) cAATCACCATCACTTTTGCCGGTGGCACTTTCCCGGCCGCAGTAATTTGCCCGGTAAAGAAGCGCCCAAATTCATGTGCCGCTTCAACAATGGCGCGATAA‑CGGCGATGTTCGCCATCGAGCTTAGTGCGTCCAGCGATTGTGCGCGTga < 2:85434/150‑1 (MQ=255) cAATCACCATCACTTTTGCCGGTGGCACTTTCCCGGCCGCAGTAATTTGCCCGGTAAAGAAGCGCCCAAATTCATGTGCCGCTTCAACAATGGCGCGATAA‑CGGCGATGTTCGCCATCGAGCTTAGTGCGTCCAGCGATTGTGCGCGTga < 1:137051/150‑1 (MQ=255) aaTCACCATCACTTTTGCCGGTGGCACTTTCCCGGCCGCAGTAATTTGCCCGGTAAAGAAGCGCCCAAATTCATGTGCCGCTTCAACAATGGCGCGATAA‑CGGCGATGTTCGCCATCGAGCTTAGTGCGTCCAGCGATTGTGCGCGTgag < 4:30442/150‑1 (MQ=255) aTCACCATCACTTTTGCCGGTGGCACTTTCCCGGCCGCAGTAATTTGCCCGGTAAAGAAGCGCCCAAATTCATGTGCCGCTTCAACAATGGCGCGATAA‑CGGCGATGTTCGCCATCGAGCTTAGTGCGTCCAGCGATTGTGCGCGTgaga < 4:500562/150‑1 (MQ=255) aCCATCACTTTTGCCGGTGGCACTTTCCCGGCCGCAGTAATTTGCCCGGTAAAGAAGCGCCCAAATTCATGTGCCGCTTCAACAATGGCGCGATAA‑CGGCGATGTTCGCCATCGAGCTTAGTGCGTCCAGCGATTGTGCGCGTGAGATAc > 2:947586/1‑150 (MQ=255) ccATCACTTTTGCCGGTGGCACTTTCCCGGCCGCAGTAATTTGCCCGGTAAAGAAGCGCCCAAATTCATGTGCCGCTTCAACAATGGCGCGATAA‑CGGCGATGTTCGCCATCGAGCTTAGTGCGTCCAGCGATTGTGCGCGTGAGATAcg > 2:243831/1‑150 (MQ=255) aTCACTTTTGCCGGTGGCACTTTCCCGGCCGCAGTAATTTGCCCGGTAAAGAAGCGCCCAAATTCATGTGCCGCTTCAACAATGGCGCGATAA‑CGGCGATGTTCGCCATCGAGCTTAGTGCGTCCAGCGATTGTGCGCGTGAGATAcgcg < 2:78549/150‑1 (MQ=255) aTCACTGTTGCCGGTGGCACTTTCCCGGCCTCAGGAATTTGCCCGGTAAAGAAGCGCCCAAATTCATGTGCCGCTTCAACAATGGCGCGCTAA‑CGGCGACGTTCGCCATCGAGCTAAGTGCGTCCAGCGATTGCGCGCGTGAGATAcgcg > 2:998225/1‑150 (MQ=255) aCTTTTGCCGGTGGCACTTTCCCGGCCGCAGTAATTTGCCCGGTAAAGAAGCGCCCAAATTCATGTGCCGCTTCAACAATGGCGCGATAA‑CGGCGATGTTCGCCATCGAGCTTAGTGCGTCCAGCGATTGTGCGCGTGAGATACGCGGca < 1:606198/150‑1 (MQ=255) ttttGCCGGTGGCACTATCCCGGCCGCAGTAATTTGCCCGGTAAAGAAGAGCCCAAATTCATGTGCCGCTTCAACAATGGCGCGATAA‑CGGCGATGTTCGCCATCGAGCTTAGTGCGTCAAGCAATTGTGCGCGTGAGATACGCGGcaca > 2:1144021/1‑150 (MQ=255) tttGCCGGTGGCACTTTCCCGGCCGCAGTAATTTGCCCGGTAAAGAAGCGCCCAAATTCATGTGCCGCTTCAACAATGGCGCGATAA‑CGGCGATGTTCGCCATCGAGCTTAGTGCGTCCAGCGATTGTGCGCGTGAGATACGCGGCACag > 1:939271/1‑150 (MQ=255) tGCCGGTGGCACTTTCCCGGCCGCAGTAATTTGCCCGGTAAAGAAGCGCCCAAATTCATGTGCCGCTTCAACAATGGCGCGATAA‑CGGCGATGTTCGCCATCGAGCTTAGTGCGTCCAGCGATTGTGCGCGTGAGATACGCGGCACagag < 1:745127/150‑1 (MQ=255) gCCGGTGGCACTTTCCCGGCCGCAGTAATTTGCCCGGTAAAGAAGCGCCCAAATTCATGTGCCGCTTCAACAATGGCGCGATAA‑CGGCGATGTTCGCCATCGAGCTTAGTGCGTCCAGCGATTGTGCGCGTGAGATACGCGGCACAGAGt < 2:1006640/150‑1 (MQ=255) ccGGTGGCACTTTCCCGGCCGCAGTAATTTGCCCGGTAAAGAAGCGCCCAAATTCATGTGCCGCTTCAACAATGGCGCGATAA‑CGGCGATGTTCGCCATCGAGCTTAGTGCGTCCAGCGATTGTGCGCGTGAGATACGCGGCACAGAGTc > 2:1096126/1‑150 (MQ=255) gTGGCACTTTCCCGGCCGCAGTAATTTGCCCGGTAAAGAAGCGCCCAAATTCATGTGCCGCTTCAACAATGGCGCGATAA‑CGGCGATGTTCGCCATCGAGCTTAGTGCGTCCAGCGATTGTGCGCGTGAGATACGCGGCACAGAGTCCAt > 4:318845/1‑150 (MQ=255) gCACTTTCCCGGCCGCAGTAATTTGCCCGGTAAAGAAGCGCCCAAATTCATGTGCCGCTTCAACAATGGCGCGATAA‑CGGCGATGTTCGCCATCGAGCTTAGTGCGTCCAGCGATTGTGCGCGTGAGATACGCGGCACAGAGTCCATCGc > 2:598508/1‑150 (MQ=255) cTTTCCCGGCCGCAGTAATTTGCCCGGTAAAGAAGCGCCCAAATTCATGTGCCGCTTCAACAATGGCGCGATAA‑CGGCGATGTTCGCCATCGAGCTTAGTGCGTCCAGCGATTGTGCGCGTGAGATACGCGGCACAGAGTCCATCGCCAt > 1:1074943/1‑150 (MQ=255) cTTTCCCGGCCGCAGTAATTTGCCCGGTAAAGAAGCGCCCAAATTCATGTGCCGCTTCAACAATGGCGCGATAA‑CGGCGATGTTCGCCATCGAGCTTAGTGCGTCCAGCGATTGTGCGCGTGAGATACGCGGCACAGAGTCCATCGCCAt > 2:337272/1‑150 (MQ=255) cTTTCCCGGCCGCAGTAATTTGCCCGGTAAAGAAGCGCCCAAATTAATGTGCCGCTTCCCCCATGCCGCGGTAA‑CGGCAATGTTCCCCATCGAGCTTAGTGCGTCCAGCGATTGTGCGCGTGAGATACGCGGCACAGAGTCCATCGCCAt < 3:735208/150‑1 (MQ=255) tttCCCGGCCGCAGTAATTTGCCCGGTAAAGAAGCGCCCAAATTCATGTGCGGCTTCAACAATAGCGCGATAACCGGCGATGTTGGCCATCGAGCCTAGTGCGTCCAGCGATTGTGCGCGTGAGATACGCGGCACAGAGTCCATCGCCAt < 4:436975/150‑1 (MQ=255) ccGGCCGCAGTAATTTGCCCGGTAAAGAAGCGCCCAAATTCATGTGCCGCTTCAACAATGGCGCGATAA‑CGGCGATGTTCGCCATCGAGCTTAGTGCGTCCAGCGATTGTGCGCGTGAGATACGCGGCACAGAGTCCATCGCCATCACgg > 1:1090845/1‑150 (MQ=255) cGGCCGCAGTAATTTGCCCGGTAAAGAAGCGCCCAAATTCATGTGCCGCTTCAACAATGGCGCGATAA‑CGGCGATGTTCGCCATCGAGCTTAGTGCGTCCAGCGATTGTGCGCGTGAGATACGCGGCACAGAGTCCATCGCCagtgacac > 2:34106/1‑143 (MQ=255) cGGCCGCAGTAATTTGCCCGGTAAAGAAGCGCCCAAATTCATGTGCCGCTTCAACAATGGCGCGATAA‑CGGCGATGTTCGCCATCGAGCTTAGTGCGTCCAGCGATTGTGCGCGTGAGATACGCGGCACAGAGTCCATCGCCATCACGGt > 4:172082/1‑150 (MQ=255) gTAATTTGCCCGGTAAAGAAGCGCCCAAATTCATGTGCCGCTTCAACAATGGCGCGATAA‑CGGCGATGTTCGCCATCGAGCTTAGTGCGTCCAGCGATTGTGCGCGTGAGATACGCGGCACAGAGTCCATCGCCATCACGGTCacgttac < 2:1074943/150‑1 (MQ=255) tAATTTGCCCGGTAAAGAAGCGCCCAAATTCATGTGCCGCTTCAACAATGGCGCGATAA‑CGGCGATGTTCGCCATCGAGCTTAGTGCGTCCAGCGATTGTGCGCGTGAGATACGCGGCACAGAGTCCATCGCCATCACGGTCacgttacg > 1:1133973/1‑150 (MQ=255) tAATTTGCCCGGTAAAGAAGCGCCCAAATTCATGTGCCGCTTCAACAATGGCGCGATAA‑CGGCGATGTTCGCCATCGAGCTTAGTGCGTCCAGCGATTGTGCGCGTGAGATACGCGGCACAGAGTCCATCGCCATCACGGTCacgttacg < 1:511414/150‑1 (MQ=255) aagaagCGCCCAAATTCATGTGCCGCTTCAACAATGGCGCGATAA‑CGGCGATGTTCGCCATCGAGCTTAGTGCGTCCAGCGATTGTGCGCGTGAGATACGCGGCACAGAGTCCATCGCCATCACGGTCACGTTACGTTCCGCAAGttttt < 2:65483/150‑1 (MQ=255) agaagCGCCCAAATTCATGTGCCGCTTCAACAATGGCGCGATAA‑CGGCGATGTTCGCCATCGAGCTTAGTGCGTCCAGCGATTGTGCGCGTGAGATACGCGGCACAGAGTCCATCGCCATCACGGTCACGTTACGTTCCGCAAGTTTTTg < 3:300764/150‑1 (MQ=255) agaagCGCCCAAATTCATGTGCCGCTTCAACAATGGCGCGATAA‑CGGCGATGTTCGCCATCGAGCTTAGTGCGTCCAGCGATTGTGCGCGTGAGATACGCGGCACAGAGTCCATCGCCATCACGGTCACGTTACGTTCCGCAAGTTTTTg < 2:215331/150‑1 (MQ=255) gaagCGCCCAAATTCATGTGCCGCTTCAACAATGGCGCGATAA‑CGGCGATGTTCGCCATCGAGCTTAGTGCGTCCAGCGATTGTGCGCGTGAGATACGCGGCACAGAGTCCATCGCCATCACGGTCACGTTACGTTCCGCAAGTTTTTGc < 3:331103/150‑1 (MQ=255) aagCGCCCAAATTCATGTGCCGCTTCAACAATGGCGCGATAA‑CGGCGATGTTCGCCATCGAGCTTAGTGCGTCCAGCGATTGTGCGCGTGAGATACGCGGCACAGAGTCCATCGCCATCACGGTCACGTTACGTTCCGCAAGTTTTTGCa > 3:450563/1‑150 (MQ=255) aagCGCCCAAATTCATGTGCCGCTTCAACAATGGCGCGATAA‑CGGCGATGTTCGCCATCGAGCTTAGTGCGTCCAGCGATTGTGCGCGTGAGATACGCGGCACAGAGTCCATCGCCATCACGGTCACGTTACGTTCCGCAAGTTTTTGCa > 4:527410/1‑150 (MQ=255) ccAAATTCATGTGCCGCTTCAACAATGGCGCGATAA‑CGGCGATGTTCGCCATCGAGCTTAGTGCGTCCAGCGATTGTGTGCGTGAGATACGCGGCACAGAGTCCATCGCCATCACGGTCACGTTACGTTCCGCAAGTTTTTGCATTAAtt > 4:402871/1‑150 (MQ=255) cAAATTCATGTGCCGCTTCAACAATGGCGCGATAA‑CGGCGATGTTCGCCATCGAGCTTAGTGCGTCCAGCGATTGTGCGCGTGAGATACGCGGCACAGAGTCCATCGCCATCACGGTCACGTTACGTTCCGCAAGTTTTTGCATTAATTc > 3:158519/1‑150 (MQ=255) aagttCATGTGCCGCTACAACAATGGCGCGATAA‑CGGCGATGTCCGCCATCGAGCTTAGTGCGTCCAGCGATTGTGCGCGTGAGATACGCGGCACAGAGTCCATCGCCATCACGGTCACGTTACTTTCCGCAAGTTTTTGCATTAATTcc < 4:407793/147‑1 (MQ=255) aaaTTCATGTGCCGCTTCAACAATGGCGCGATAA‑CGGCGATGTTCGCCATCGAGCTTAGTGCGTCCAGCGATTGTGCGCGTGAGATACGCGGCACAGAGTCCATCGCCATCACGGTCACGTTACGTTCCGCAAGTTTTTGCATTAATTcc > 2:487756/1‑150 (MQ=255) aaaTTCATGTGCCGCTTCAACAATGGCGCGATAA‑CGGCGATGTTCGCCATCGAGCTTAGTGCGTCCAGCGATTGTGCGCGTGAGATACGCGGCACAGAGTCCATCGCCATCACGGTCACGTTACGTTCCGCAAGTTTTTGCATTAATTcc < 1:509081/150‑1 (MQ=255) aaaTTCATGTGCCGCTTCAACAACTGCGCGATAA‑CGGCGAGGTTCGCCATCGAGCTTAGTGCGTCCAGCGATTGTGCGCGTGAAATCCGCGGCTCAGAGTCCATCGCCATCACGGTCACGTTACGTTCCGCAAGTTTTTGCATTAATTcc < 2:939271/150‑1 (MQ=255) aaTTCATGTGCCGCTTCAACAATGGCGCGATAA‑CGGCGATGTTCGCCATCGAGCTTAGTGCGTCCAGCGATTGTGCGCGTGAGATACGCGGCACAGAGTCCATCGCCATCACGGTCACGTTACGTTCCGCAAGTTTTTGCATTAATTCCg > 1:1006086/1‑150 (MQ=255) ttCATGTGCCGCTTCAACAATGGCGCGATAA‑CGGCGATGTTCGCCATCGAGCTTAGTGCGTCCAGCGATTGTGCGCGTGAGATACGCGGCACAGAGTCCATCGCCATCACGGTCACGTTACGTTCCGCAAGTTTTTGCATTAATTCCGGa < 2:751528/150‑1 (MQ=255) tgtgCCGCTTCAACAATGGCGCGATAA‑CGGCGATGTTCGCCATCGAGCTTAGTGCGTCCAGCGATTGTGCGCGTGAGATACGCGGCACAGAGTCCATCGCCATCACGGTCACGTTACGTTCCGCAAGTTTTTGCATTAATTCCGGATTCt > 2:692632/1‑150 (MQ=255) gtgCCGCTTCAACAATGGCGCGATAA‑CGGCGATGTTCGCCATCGAGCTTAGTGCGTCCAGCGATTGTGCGCGTGAGATACGCGGCACAGAGTCCATCGCCATCACGGTCACGTTACGTTCCGCAAGTTTTTGCATTAATTCCGGa < 1:247797/145‑1 (MQ=255) gtgCCGCTTCAACAATGGCGCGATAA‑CGGCGATGTTCGCCATCGAGCTTAGTGCGTCCAGCGATTGTGCGCGTGAGATACGCGGCACAGAGTCCATCGCCATCACGGTCACGTTACGTTCCGCAAGTTTTTGCATTAATTCCGGa > 2:247797/1‑145 (MQ=255) tgCCGCTTCAACAATGGCGCGATAACCGGCGATGTTCGCCATCGAGCTTAGTGCGTCCAGCGATTGTGCGCGTGAGATACGCGGCACAGAGTCCATCGCCATCACGGTCACGTTACGTTCCGCAAGTCTTTGCATTAATTCCGGAGTCTg > 2:1217202/1‑150 (MQ=255) gCTTCAACAATGGCGCGATAA‑CGGCGATGTTCGCCATCGAGCTTAGTGCGTCCAGCGATTGTGCGCGTGAGATACGCGGCACAGAGTCCATCGCCATCACGGTCACGTTACGTTCCGCAAGTTTTTGCATTAATTCCGGATTCTGCGCAg > 4:80400/1‑150 (MQ=255) cTTCAACAATGGCGCGATAA‑CGGCGATGTTCGCCATCGAGCTTAGTGCGTCCAGCGATTGTGCGCGTGAGATACGCGGCACAGAGTCCATCGCCATCACGGTCACGTTACGTTCCGCaa > 1:73308/1‑119 (MQ=255) cTTCAACAATGGCGCGATAA‑CGGCGATGTTCGCCATCGAGCTTAGTGCGTCCAGCGATTGTGCGCGTGAGATACGCGGCACAGAGTCCATCGCCATCACGGTCACGTTACGTTCCGCaa < 2:73308/119‑1 (MQ=255) tCAACGATGGCGCGATAA‑CGGCGATGTTCGCCATCGAGCTTAGTGCGTCCAGCGATTGTGCGCGTGAGATACGCGGCACAGAGTCCATCGCCATCACGGTCACGTTACGTTCCGCAAGTTTTTGCATTAATTCCGGATTCTGCGCAGGcc < 2:197677/150‑1 (MQ=255) aacaaTGGCGCGATAA‑CGGCGATGTTCGCCATCGAGCTTAGTGCGTCCAGCGATTGTGCGCGTGAGATACGCGGCACAGAGTCCATCGCCATCACGGTCACGTTACGTTCCGCAAGTTTTTGCATTAATTCCGGATTCTGCGCAGGCCAg > 3:624388/1‑150 (MQ=255) ggCGCGATAA‑CGGCGATGTTCGCCATCGAGCTTAGTGCGTCCAGCGATTGTGCGCGTGAGATACGCGGCACAGAGTCCATCGCCATCACGGTCACGTTACGTTCCGCAAGTTTTTGCATTAATTCCGGATTCTGCGCAGGCCAGATaaaa < 2:259133/150‑1 (MQ=255) ggCGCGATAA‑CGGCGATGTTCGCCATCGAGCTTAGTGCGTCCAGCGATTGTGCGCGTGAGATACGCGGCACAGAGTCCATCGCCATCACGGTCACGTTACGTTCCGCAAGTTTTTGCATTAATTCCGGATTCTGCGCAGGCCAGATaaaa < 1:781808/150‑1 (MQ=255) ggCGCGATAA‑CGGCGATGTTCGCCATCGAGCTTAGTGCGTCCAGCGATTGTGCGCGTGAGATACGCGGCACAGAGTCCATCGCCATCACGGTCACGTTACGTTCCGCAAGTTTTTGCATTAATTCCGGATTCTGCGCAGGCCAGATaaaa < 3:318845/150‑1 (MQ=255) gcgcGATAACCGGCGATGGTCGCCATCGAGCTTAGTGCGTCCAGCGATTGTGCGCGTGAGATACGCGGCACAGAGTCCATCGCCATCACGGTCACGTTACGTTCCGCAAGTTTTTGCATTAATTCCGGATTCTGCGCAGGCCAGATaaaa < 2:230055/150‑1 (MQ=255) | CGAGACTGTTTGCTGCGCCAATGGCGGCCAGACCTGCAACACCCGCACCAATCACCATCACTTTTGCCGGTGGCACTTTCCCGGCCGCAGTAATTTGCCCGGTAAAGAAGCGCCCAAATTCATGTGCCGCTTCAACAATGGCGCGATAACCGGCGATGTTCGCCATCGAGCTTAGTGCGTCCAGCGATTGTGCGCGTGAGATACGCGGCACAGAGTCCATCGCCATCACGGTCACGTTACGTTCCGCAAGTTTTTGCATTAATTCCGGATTCTGCGCAGGCCAGATAAAA > NC_000913_3_pae_pgi/1677342‑1677631 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |