| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913_3_pae_pgi | 202,398 | C→T | R100C (CGC→TGC) | fabZ → | (3R)‑hydroxymyristol acyl carrier protein dehydratase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913_3_pae_pgi | 202,398 | 0 | C | T | 99.3% | 478.7 / ‑4.6 | 137 | R100C (CGC→TGC) | fabZ | (3R)‑hydroxymyristol acyl carrier protein dehydratase |
| Reads supporting (aligned to +/- strand): ref base C (1/0); new base T (69/66); total (71/66) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.75e-01 | |||||||||||
Only 100 of 137 total aligned reads displayed.
TCCAGGGCCATTTCCCTGGAAAACCGATTTTCCCGGGTGTGCTGATTCTGGAAGCAATGGCACAGGCAACAGGTATTCTGGCGTTTAAAAGCGTAGGAAAACTGGAACCGGGTGAGCTGTACTACTTCGCTGGTATTGACGAAGCGCGCTTCAAGCGCCCGGTCGTGCCTGGCGATCAAATGATCATGGAAGTCACTTTCG‑AAAAAACGCGCCGCGGCCTGACCCGTTTTAAAGGGGTTGCTCTGGTCGATGGTAAAGTAGTTTGCGAAGCAACGATGATGTGTGCTC > NC_000913_3_pae_pgi/202252‑202539 | tcCAGGGCCATTTCCCTGGAAAACCGATTTTCCCGGGTGTGCTGATTCTGGAAGCAATGGCACAGGCAACAGGTATTCTGGCGTTTAAAAGCGTAGGAAAACTGGAACCGGGTGAGCTGTACTACTTCGCTGGTATTGACGAAGCGTGCt < 4:76590/150‑1 (MQ=255)tcCAGGGCCATTTCCCTGGAAAACCGATTTTCCCGGGTGTGCTGATTCTGGAAGCAATGGCACAGGCAACAGGTATTCTGGCGTTTAAAAGCGTAGGAAAACTGGAACCGGGTGAGCTGTACTACTTCGCTGGTATTGACGAAGCGTGCt < 3:281169/150‑1 (MQ=255) aGGGCCATTTCCCTGGAAAACCGATTTTCCCGGGTGTGCTGATTCTGGAAGCAATGGCACAGGCAACAGGTATTCTGGCGTTTAAAAGCGTAGGAAAACTGGAACCGGGTGAGCTGTACTACTTCGCTGGTATTGACGAAGCGTGCTTCa < 4:916754/150‑1 (MQ=255) aGGGCCATTTCCCTGGAAAACCGATTTTCCCGGGTGTGCTGATTCTGGAAGCAATGGCACAGGCAACAGGTATTCTGGCGTTTAAAAGCGTAGGAAAACTGGAACCGGGTGAGCTGTACTACTTCGCTGGTATTGACGAAGCGTGCATCa > 2:671912/1‑150 (MQ=255) aGGGCCATTTCCCTGGAAAACCGATTTACCCGGGTGTGCTGATTCTGGAAGCAATGGCACAGGCAACAGGTATTCTGGCGTTTAAAAACGTAGGAAAACTGGAACCGGGTGAGCTGTACTACTTCGCTGGTATTGACGATGCGTGCTTCa > 2:712224/1‑150 (MQ=255) ggCCATTTCCCTGGAAAACCGATTTTCCCGGGTGTGCTGATTCTGGAAGCAATGGCACAGGCAACAGGTATTCTGGCGTTTAAAAGCGTAGGAAAACTGGAACCGGGTGGGCTGTACTACTTCGCTGGTATTGACGAAGCGTGCTTCAAg > 3:797349/1‑150 (MQ=255) aTTTCCCTGGAAAACCGATTTTCCCGGGTGTGCTGATTCTGGAAGCAATGGCACAGGCAACAGGTATTCTGGCGTTTAAAAGCGTAGGAAAACTGGAACCGGGTGAGCTGTACTACTTCGCTGGTATTGACGAAGCGTGCTTCAAGCGcc < 1:1252283/150‑1 (MQ=255) ccTGGAAAACCGATTTTCCCGGGTGTGCTGATTCTGGAAGCAATGGCACAGGCAACAGGTATTCTGGCGTTTAAAAGCGTAGGAAAACTGGAACCGGGTGAGCTGTACTACTTCGCTGGTATTGACGAAGCGTGCTTCAAGCGCCCGGTc > 2:1535707/1‑150 (MQ=255) tGGAAAACCGATTTTCGCGGGTGTGCTGATTCTGGAAGCAATGGCACAGGCAACAGGTATTCTGGCGTTTAAAAGCGTAGGAAAACTGGAACCGGGTGAGCTGTACTACTTCGCTGGTATTGACGAAGCGTGCTTCAAGCGCCCGGTCGt > 2:856574/1‑150 (MQ=255) tGGAAAACCGATTTGCCCGGGTGTGCTGATTCTGGAAGCAATGGCACAGGCAACAGGTATTCTGGCGTTTAAAAGCGTAGGAAAACTGGAACCGGGTGAGCTGTACTACTTCGCTGGTATTGACGAAGCGTGCTTCAAGCGCCCGGTCGt < 2:1186049/150‑1 (MQ=255) ggAAAACCGATTTTCCCGGGTGTGCTGATTCTGGAAGCAATGGCACAGGCAACAGGTATTCTGGCGTTTAAAAGCGTAGGAAAACTGGAACCGGGTGAGCTGTACTACTTCGCTGGTATTGACGAAGCGTGCTTCAAGCGCCCGGTCGTg > 4:911136/1‑150 (MQ=255) gAAAACCGATTTTCCCGGGTGTGCTGATTCTGGAAGCAATGGCACAGGCAACAGGTATTCTGGCGTTTAAAAGCGTAGGAAAACTGGAACCGGGTGAGCTGTACTACTTCGCTGGTATTGACGAAGCGTGCTTCAAGCGCCCGGTCGTGc > 2:459261/1‑150 (MQ=255) aCCGATTTTCCCGGGTGTGCTGATTCTGGAAGCAATGGCACAGGCAACAGGTATTCTGGCGTTTAAAAGCGTAGGAAAACTGGAACCGGGTGAGCTGTACTACTTCGCTGGTATTGACGAAGCGTGCTTCAAGCGCCCGGTCGTGCCTgg > 1:788919/1‑150 (MQ=255) ccGATTTTCCCGGGTGTGCTGATTCTGGAAGCAATGGCACAGGCAACAGGTATTCTGGCGTTTAAAAGCGTAGGAAAACTGGAACCGGGTGAGCTGTACTACTTCGCTGGTATTGACGAAGCGTGCTTCAAGCGCCCGGTCGTGCCTggt > 1:10210/1‑149 (MQ=255) ccGATTTTCCCGGGTGTGCTGATTCTGGAAGCAATGGCACAGGCAACAGGTATTCTGGCGTTTAAAAGCGTAGGAAAACTGGAACCGGGTGAGCTGTACTACTTCGCTGGTATTGACGAAGCGTGCTTCAAGCGCCCGGTCGTGCCTGGc < 2:1321392/150‑1 (MQ=255) cGGGTGTGCTGATTCTGGAAGCAATGGCACAGGCAACAGGTATTCTGGCGTTTAAAAGCGTAGGAAAACTGGAACCGGGTGAGCTGTACTACTTCGCTGGTATTGACGAAGCGTGCTTCAAGCGcc > 4:819428/1‑126 (MQ=255) cGGGTGTGCTGATTCTGGAAGCAATGGCACAGGCAACAGGTATTCTGGCGTTTAAAAGCGTAGGAAAACTGGAACCGGGTGAGCTGTACTACTTCGCTGGTATTGACGAAGCGTGCTTCAAGCGcc < 3:819428/126‑1 (MQ=255) gggTGTGCTGATTCTGGAAGCAATGGCACAGGCAACAGGTATTCTGGCGTTTAAAAGCGTAGGAAAACTGGAACCGGGTGAGCTGTACTACTTCGCTGGTATTGACGAAGCGTGCTTCAAGCGCCCGGTCGTGCCTGGCGATCAAATGAt < 3:839790/150‑1 (MQ=255) ggTGTGCTGATTCTGGAAGCAATGGCACAGGCAACAGGTATTCTGGCGTTTAAAAGCGTAGGAAAACTGGAACCGGGTGAGCTGTACTACTTCGCTGGTATTGACGAAGCGTGCTTCAAGCGCCCGGTCGTGCCTGGCGATCAAATGATc < 2:170029/150‑1 (MQ=255) ggTGTGCTGATTCTGGAAGCAATGGCACAGGCAACAGGTATTCTGGCGTTTAAAAGCGTAGGAAAACTGGAACCGGGTGAGCTGTACTACTTCGCTGGTATTGACGAAGCGTGCTTCAAGCGCCCGGTCGTGCCTGGCGATCAAATGATc < 3:568769/150‑1 (MQ=255) cTGATTCTGGAAGCAATGGCACAGGCAACAGGTATTCTGGCGTTTAAAAGCGTAGGAAAACTGGAACCGGGTGAGCTGTACTACTTCGCTGGTATTGACGAAGCGTGCTTCAAGCGCCCGGTCGTGCCTGGCGATCAAATGATCATGGaa < 3:368790/150‑1 (MQ=255) gATTCTGGAAGCAATGGCACAGGCAACAGGTATTCTGGCGTTTAAAAGCGTAGGAAAACTGGAACCGGGTGAGCTGTACTACTTCGCTGGTATTGACGAAGCGTGCTTCAAGCGCCCGGTCGTGCCTGGCGATCAAATGATCATGGAAGt > 3:59363/1‑150 (MQ=255) aTTCTGGAAGCAATGGCACAGGCAACAGGTATTCTGGCGTTTAAAAGCGTAGGAAAACTGGAACCGGGTGAGCTGTACTACTTCGCTGGTATTGACGAAGCGTGCTTCAAGCGCCCGGTCGTGCCTGGCGATCAAATGATCATGGAAGTc > 2:621165/1‑150 (MQ=255) aTTCTGGAAGCAATGGCACAGGCAACAGGTATTCTGGCGTTTAAAAGCGTAGGAAAACTGGAACCGGGTGAGCTGTACTACTTCGCTGGTATTGACGAAGCGTGCTTCAAGCGCCCGGTCGTGCCTGGCGATCAAATGATCATGGAAGTc > 3:1036375/1‑150 (MQ=255) tGGAAGCAATGGCACAGGCAACAGGTATTCTGGCGTTTAAAAGCGTAGGAAAACTGGAACCGGGTGAGCTGTACTACTTCGCTGGTATTGACGAAGCGTGCTTCAAGCGCCCGGTCGTGCCTGGCGATCAAATGAt > 3:470888/1‑136 (MQ=255) tGGAAGCAATGGCACAGGCAACAGGTATTCTGGCGTTTAAAAGCGTAGGAAAACTGGAACCGGGTGAGCTGTACTACTTCGCTGGTATTGACGAAGCGTGCTTCAAGCGCCCGGTCGTGCCTGGCGATCAAATGAt < 4:470888/136‑1 (MQ=255) ggAAGCAATGGCACAGGCAACAGGTATTCTGGCGTTTAAAAGCGTAGGAAAACTGGAACCGGGTGAGCTGTACTACTTCGCTGGTATTGACGAAGCGTGCTTCAAGCGCCCGGTCGTGTCTGGCGATCAAATGATCATGGAAGTCACttt < 3:220327/150‑1 (MQ=255) ggAAGCAATGGCACAGACAACAGGTATTATGGCGTTTAAAAGCGTAGGAAAACTGGAACCGGGGGAGCGGTACTACTTCGCTGGTATTGACGAAGCGTGCTTCAAGCGCCCGGTCGTGCCTGGCGATCCAATGATCACGGAAGTCACttt > 2:875631/1‑150 (MQ=255) aGCAATGGCACAGGCAACAGGTATTCTGGCGTTTAAAAGCGTAGGAAAACTGGAACCGGGTGAGCTGTACTACTTCGCTGGTATTGACGAAGCGTGCTTCAAGCGCCCGGTCGTGCCTGGCGATCAAATGATCATGGAAGTCACTTTCG‑a > 3:313080/1‑150 (MQ=255) cAATGGCACAGGCAACAGGTATTCTGGCGTTTAAAAGCGTAGGAAAACTGGAACCGGGTGAGCTGTACTACTTCGCTGGTATTGACGAAGCGTGCTTCAAGCGCCCGGTCGTGCCTGGCGATCAAATGATCATGGAAGTCACTTTCG‑aaa > 1:908744/1‑150 (MQ=255) ggCACAGGCAACAGGTATTCTGGCGTTTAAAAGCGTAGGAAAACTGGAACCGGGTGAGCTGTACTACTTCGCTGGTATTGACGAAGCGTGCTTCAAGCGCCCGGTCGTGCCTg < 3:782117/113‑1 (MQ=255) ggCACAGGCAACAGGTATTCTGGCGTTTAAAAGCGTAGGAAAACTGGAACCGGGTGAGCTGTACTACTTCGCTGGTATTGACGAAGCGTGCTTCAAGCGCCCGGTCGTGCCTg > 4:782117/1‑113 (MQ=255) ggCACAGGCAACAGGTATTCTGGCGTTTAAAAGCGTAGGAAAACTGGAACCGGGTGAGCTGTACTACTTCGCTGGTATTGACGAAGCGTGCTTCAAGCGCCCGGTCGTGCCTGGCGATCAAATGATCATGGAAGTCACTTTCG‑AAAAAAc > 1:1182439/1‑150 (MQ=255) gCACAGGCAACAGGTATTCTGGCGTTTAAAAGCGTAGGAAAACTGGAACCGGGTGAGCTGTACTACTTCGCTGGTATTGACGAAGCGTGCTTCAAGCGCCCGGTCGTGCCTGGCGATCAAATGATCATGGAAGTCACTTTCG‑aaaaa < 4:589945/147‑1 (MQ=255) gCACAGGCAACAGGTATTCTGGCGTTTAAAAGCGTAGGAAAACTGGAACCGGGTGAGCTGTACTACTTCGCTGGTATTGACGAAGCGTGCTTCAAGCGCCCGGTCGTGCCTGGCGATCAAATGATCATGGAAGTCACTTTCG‑AAAAAAcg > 1:890090/1‑150 (MQ=255) cacaGGCAACAGGTATTCTGGCGTTTAAAAGCGTAGGAAAACTGGAACCGGGTGAGCTGTACTACTTCGCTGGTATTGACGAAGCGTGCTTCAAGCGCCCGGTCGTGCCTGGCGATCAAATGATCATGGAAGTCACTTTCG‑AAAAAAcgc < 3:1039293/150‑1 (MQ=255) cacaGGCAACAGGTATTCTGGCGTTTAAAAGCGTAGGAAAACTGGAACCGGGTGAGCTGTACTACTTCGCTGGTATTGACGAAGCGTGCTTCAAGCGCCCGGTCGTGCCTGGCGATCAAATGATCATGGAAGTCACTTTCG‑AAAAAAcgc < 2:890090/150‑1 (MQ=255) ggCAACAGGTATTCTGGCGTTTAAAAGCGTAGGAAAACTGGAACCGGGTGAGCTGTACTACTTCGCTGGTATTGACGAAGCGTGCTTCAAGCGCCCGGTCGTGCCTGGCGATCAAATGATCATGGAAGTCACTTTCG‑AAAAAACGcgccg > 2:1073907/1‑150 (MQ=255) gCAACAGGTATTCTGGCGTTTAAAAGCGTAGGAAAACTGGAACCGGGTGAGCTGTACTACTTCGCTGGTATTGACGAAGCGTGCTTCAAGCGCCCGGTCGTGCCTGGCGATCAAATGATCATGGAAGTCACTTTCG‑AAAAAACGcgccgc > 2:74030/1‑150 (MQ=255) gCAACAGGTATTCTGGCGTTTAAAAGCGTAGGAAAACTGGAACCGGGTGAGCTGTACTACTTCGCTGGTATTGACGAAGCGTGCTTCAAGCGCCCGGTCGTGCCTGGCGATCAAATGATCATGGAAGTCACTTTCG‑AAAAAACGcgccgc > 1:1502876/1‑150 (MQ=255) agccaTTCTGGGCTTGAAAAGCGTAGTAAAACTGGAACCGGGTGAGCTGAACTACTTCGTTGCTATTGACGAAGCGGGCTTCAAGCGCCCGGTCGTGCCTTGTGATCAAATGATCATGGAACTCACTATCG‑AAAAAATGCTCCGCGGCCt > 2:1241907/5‑150 (MQ=255) gTATTCTGGCGTTTAAAAGCGTAGGAAAACTGGAACCGGGTGAGCTGTACTACTTCGCTGGTATTGACGAAGCGTGCTTCAAGCGCCCGGTCGTGCCTGGCGATCAAATGATCATGGAATTCACTTTCG‑AAAAAACGAACCGAGGACTGa > 3:619845/1‑150 (MQ=255) ttCTGGCGTTTAAAAGCGTAGGAAAACTGGAACCGGGTGAGCTGTACTACTTCGCTGGTATTGACGAAGCGTGCTTCAAGCGCCCGGTCGTGCCTGGCGATCAAATGATCATGGAAGTCACTTTCG‑AAAAAACGCGCCGCGGCCTGAccc > 4:630650/1‑150 (MQ=255) tGGCGTTTAAAAGCGTAGGAAAACTGGAACCGGGTGAGCTGTACTACTTCGCTGGTATTGACGAAGCGTGCTTCAAGCGCCCGGTCGTGCCTGGCGATCAAATGATCATGGAAGTCACTTTCG‑AAAAAACGCGCCGCGGCCTGACCCGtt > 2:409597/1‑150 (MQ=255) tGGCGTTTAAAAGCGTAGGAAAACTGGAACCGGGTGAGCTGTACTACTTCGCTGGTATTGACGAAGCGTGCTTCAAGCGCCCGGTCGTGCCTGGCGATCAAATGATCATGGAAGTCACTTTCG‑AAAAAACGCGCCGCGGCCTGACCCGtt < 1:1629052/150‑1 (MQ=255) tGGCGTTTAAAAGCGTAGGAAAACTGGAACCGGGTGAGCTGTACTACTTCGCTGGTATTGACGAAGCGTGCTTCAAGCGCCCGGTCGTGCCTGGCGATCAAATGATCATGGAAGTCACTTTCG‑AAAAAACGCGCCGCGGCCTGACCCGtt < 1:1535841/150‑1 (MQ=255) gCGTTTAAAAGCGTAGGAAAACTGGAACCGGGTGAGCTGTACTACTTCGCTGGTATTGACGAAGCGTGCTTCAAGCGCCCGGTCGTGCCTGGCGATCAAATGATCATGGAAGTCACTTTCG‑AAAAAACGCGCCGCGGCCTGACCCGtttt < 2:908744/150‑1 (MQ=255) cGTTTAAAAGCGTAGGAAAACTGGAACCGGGTGAGCTGTACTACTTCGCTGGTATTGACGAAGCGTGCTTCAAGCGCCCGGTCGTGCCTGGCGATCAAATGATCATGGAAGTCACTTTCG‑AAAAAACGCGCCGCGGCCTGACCCGTTTTa < 3:911136/150‑1 (MQ=255) gTTTAAAAGCGTAGGAAAACTGGAACCGGGTGAGCTGTACTACTTCGCTGGTATTGACGAAGCGTGCTTCAAGCGCCCGGTCGTGCCTGGCGATCAAATGATCATGGAAGTCACTTTCG‑AAAAAACGCGCCGCGGCCTGACCCGTTTTaa < 2:353257/150‑1 (MQ=255) gTTTAAAAGCGTAGGAAAACTGGAACCGGGTGAGCTGTACTACTTCGCTGGTATTGACGAAGCGTGCTTCAAGCGCCCGGTCGTGCCTGGCGATCAAATGATCATGGAAGTCACTTTCG‑AAAAAACGCGCCGCGGCCTGACCCGTTTTaa > 1:523358/1‑150 (MQ=255) tttAAAAGCGTAGGAAAACTGGAACCGGGTGAGCTGTACTACTTCGCTGGTATTGACGAAGCGTGCTTCAAGCGCCCGGTCGTGCCTGGCGATCAAATGATCATgg > 1:1008336/1‑106 (MQ=255) tttAAAAGCGTAGGAAAACTGGAACCGGGTGAGCTGTACTACTTCGCTGGTATTGACGAAGCGTGCTTCAAGCGCCCGGTCGTGCCTGGCGATCAAATGATCATgg < 2:1008336/106‑1 (MQ=255) tttAAAAGCGTAGGAAAACTGGAACCGGGTGAGCTGTACTACTTCGCTGGTATTGACGAAGCGTGCTTCAAGCGCCCGGTCGTGCCTGGCGATCAAATGATCATGGAAGTCACTTTCG‑AAAAAACGCGCCGCGGCCTGACCCGTTTTaaa < 2:1548663/150‑1 (MQ=255) tttAAAAGCGTAGGAAAACTGGAACCGGGTGAGCTGTACTACTTCGCTGGTATTGACGAAGCGTGCTTCAAGCGCCCGGTCGTGCCTGGCGATCAAATGATCATGGAAGTCACTTTCG‑AAAAAACGCGCCGCGGCCTGACCCGTTTTaaa < 4:797349/150‑1 (MQ=255) tAAAAGCGTAGGAAAACTGGAACCGGGTGAGCTGTACTACTTCGCTGGTATTGACGAAGCGTGCTTCAAGCGCCCGGTCGTGCCTGGTGATCAAATGATCATGGAAGTCACTTTCG‑AAAAAACGCGCCGCGGCCTGACCCGTTTTAAAgg < 2:10210/150‑1 (MQ=255) aaaaGCGTAGGAAAACTGGAACCGGGTGAGCTTTACTACTTCGCTGGTATTGACGAAGCGTGCTTCAAGCGCCCGGTCGTGCCTGGCGATCAAATGATCATGGAAGTCACTTTCG‑AAAAAACGCGCCGCGGCCTGACCCGTTTTAAAggg < 3:1033165/150‑1 (MQ=255) aaGCGTAGGAAAACTGGAACCGGGTGAGCTGTACTACTTCGCTGGTATTGACGAAGCGTGCt < 4:428055/62‑1 (MQ=255) aaGCGTAGGAAAACTGGAACCGGGTGAGCTGTACTACTTCGCTGGTATTGACGAAGCGTGCt > 3:428055/1‑62 (MQ=255) aaGCGTAGGAAAACTGGAACCGGGTGAGCTGTACTACTTCGCTGGTATTGACGAAGCGTGCTTCAAGCGCCCGGTCGTGCCTGGCGATCAAATGATCATGGAAGTCACTTTCG‑AAAAAACGCGCCGCGGCCTGACCCGTTTTAAAGGGGt > 4:385271/1‑150 (MQ=255) aGCGTAGGAAAACTGGAACCGGGTGAGCTGTACTACTTCGCTGGTATTGACGAAGCGTGCTTCAAGCGCCCGGTCGTGCCTGGCGATCAAATGATCATGGAAGTCACTTTCG‑AAAAAACGCGCCGCGGCCTGACCCGTTTTAAAGGGGtt > 3:295299/1‑150 (MQ=255) gCGTAGGAAGACTGGACCCGGGTGAGCTGGAGTACTTCGCTAGTATTGCCGAAGCGTGCTTCAAGCGCCCGGTCGTGCCTGGCGATCAAATGATCATGGAAGTCACTTTCG‑GAAAAACGCGCCGCGGCCTGACCCGTTTTAAAGGGGTTg < 4:313080/150‑1 (MQ=255) gCGTAGGAAAACTGGAACCGGGTGAGCTGTACTACTTCGCTGGTATTGACGAAGCGTGCTTCAAGCGCCCGGTCGt < 1:340728/76‑1 (MQ=255) gCGTAGGAAAACTGGAACCGGGTGAGCTGTACTACTTCGCTGGTATTGACGAAGCGTGCTTCAAGCGCCCGGTCGt > 2:340728/1‑76 (MQ=255) cGTAGGAAAACTGGAACCGGGTGAGCTGTACTACTTCGCTGGTATTGACGAAGCGTGCTTCAAGCGCCCGGTCGTGCCTGGCGATCAAATGATCATGGAAGTCACTTTCG‑AAAAAACGCGCCGCGGCCTGACCCGTTTTAAAGGGGTTGc < 1:746600/150‑1 (MQ=255) aGGAAAACTGGAACCGGGTGAGCTGTACTACTTCGCTGGTATTGACGAAGCGTGCTTCAAGCGCCCGGTCGTGCCTGGCGATCAAATGATCATGGAAGTCACTTTCG‑AAAAAACGCGCCGCGGCCTGACCCGTTTTAAAGGGGTTGctct < 2:523358/150‑1 (MQ=255) gAAAACTGGAACCGGGTGAGCTGTACTACTTCGCTGGTATTGACGAAGCGTGCTTCAAGCGCCCGGTCGTGCCTGGCGATCAAATGATCATGGAAGTCACTTTCG‑AAAAAACGCGCCGCGGCCTGACCCGTTTTaaa > 1:177912/1‑137 (MQ=255) gAAAACTGGAACCGGGTGAGCTGTACTACTTCGCTGGTATTGACGAAGCGTGCTTCAAGCGCCCGGTCGTGCCTGGCGATCAAATGATCATGGAAGTCACTTTCG‑AAAAAACGCGCCGCGGCCTGACCCGTTTTAAAGGGGTTGctc < 2:255959/147‑1 (MQ=255) gAAAACTGGAACCGGGTGAGCTGTACTACTTCGCTGGTATTGACGAAGCGTGCTTCAAGCGCCCGGTCGTGCCTGGCGATCAAATGATCATGGAAGTCACTTTCG‑AAAAAACGCGCCGCGGCCTGACCCGTTTTAAAGGGGTTGctc > 1:255959/1‑147 (MQ=255) gAAAACTGGAACCGGGTGAGCTGTACTACTTCGCTGGTATTGACGAAGCGTGCTTCAAGCGCCCGGTCGTGCCTGGCGATCAAATGATCATGGAAGTCACTTTCG‑AAAAAACGCGCCGCGGCCTGACCCGTTTTAAAGGGGTTGCTCTgg < 2:426055/150‑1 (MQ=255) gAAAACTGGAACCGGGTGAGCTGTACTACTTCGCTGGTATTGACGAAGCGTGCTTCAAGCGCCCGGTCGTGCCTGGCGATCAAATGATCATGGAAGTCACTTTCG‑AAAAAACGCGCCGCGGCCTGACCCGTTTTAAAGGGGTTGCTCTgg > 1:559307/1‑150 (MQ=255) gAAAACTGGAACCGGGTGAGCTGTACTACTTCGCTGGTATTGACGAAGCGCGCTTCAAGCGCCCGGTCGTGCCTGGCGATCAAATGATCATGGAAGTCACTTTCG‑AAAAAACGCGCCGCGGCCTGACCCGTTTTAAAGGGGTTGCTCTgg > 3:558309/1‑150 (MQ=255) aaaaCTGGAACCGGGTGAGCTGTACTACTTCGCTGGTATTGACGAAGCGTGCTTCAAGCGCCCGGTCGTGCCTGGCGATCAAATGATCATGGAAGTCACTTTCG‑AAAAAACGCGCCGCGGCCTGACCCGTTTTAAAGGGGTTGCTCTGGt < 1:856574/150‑1 (MQ=255) aaaaCTGGAACCGGGTGAGCTGTACTACTTCGCTGGTATTGACGAAGCGTGCTTCAAGCGCCCGGTCGTGCCTGGCGATCAAATGATCATGGAAGTCACTTTCG‑AAAAAACGCGCCGCGGCCTGACCCGTTTTAAAGGGGTTGCTCTGGt < 1:1535707/150‑1 (MQ=255) aaaaCTGGAACCGGGTGAGCTGTACTACTTCGCTGGTATTGACGAAGCGTGCTTCAAGCGCCCGGTCGTGCCTGGCGATCAAATGATCATGGAAGTCACTTTCG‑AAAAAACGCGCCGCGGCCTGACCCGTTTTAAAGGGGTTGCTCTGGt < 2:736264/150‑1 (MQ=255) ggAACCGGGTGAGCTGTACTACTTCGCTGGTATTGACGAAGCGTGCTTCAAGCGCCCGGTCGTGCCTGGCGATCAAATGATCATGGAAGAAACTAACG‑AAAAAACGCGCCGCGGCCTGACCCGTTTTAAAGGGGTTGCTCTGGTCGATgg < 4:304919/150‑1 (MQ=255) gAACCGGGTGAGCTGTACTACTTCGCTGGTATTGACGAAGCGTGCTTCAAGCGCCCGGTCGTGCCTGGCGATCAAATGATCATGGAAGTCACTTTCG‑AAAAAACGCGCCGCGGCCTGACCCGTTTTAAAGGGGTTGCTCTGGTCGATGGt > 1:704305/1‑150 (MQ=255) gAACCGGGTGAGCTGTACTACTTCGCTGGTATTGACGAAGCGTGCTTCAAGCGCCCGGTCGTGCCTGGCGATCAAATGATCATGGAAGTCACTCTCG‑AAAAAACGCGCCGCGGCCTGACCCGTTTTAAAGGGGTTGGTCTGGTCGATGGt > 2:1088960/1‑150 (MQ=255) aCCGGGTGAGCTGTACTACTTCGCTGGTATTGACGAAGCGTGCTTc > 1:34603/1‑46 (MQ=255) ggTGAGCTGTACTACTTCGCTGGTATTGACGAAGCGTGCTTCAAGCGCCCGGTCGTGCCTGGCGATCAAATGATCATGGAAGTCACTTTCG‑AAAAAACGCGCCGCGGCCTGACCCGTTTTAAAGGGGTTGCTCTGGTCGATGGTAAagta < 4:1009316/150‑1 (MQ=255) gCTGTACTACTTCGCTGGTATTGACGAAGCGTGCTTCAAGCGCCCGGTCGTGCCTGGCGATCAAATGATCATGGAAGTCTCTTTCG‑AAAAAACGCGCCGCGGCCTGACCCGTTTTAAAGGGGTTGCTCTGGTCGATGGTAAAGTAGTTTg < 3:541453/150‑1 (MQ=255) gCTGTACTACTTCGCTGGTATTGACGAAGCGTGCTTCAAGCGCCCGGTCGTGCCTGGCGATCAAATGATCATGGAAGTCACTTTCG‑AAAAAACGCGCCGCGGCCTGACCCGTTTTAAAGGGGTTGCTCTGGTCGATGGTAAAGTAGTTTg < 3:425025/150‑1 (MQ=255) tGTACTACTTCGCTGGTATTGACGAAGCGTGCTTCAAGCGCCCGGTCGTGCCTGGCGATCAAATGATCATGGAAGTCACTTTCG‑AAAAAACGCGCCGCGGCCTGACCCGTTTTAAAGGGGTTGCTCTGGTCGATGGTAAAGTAGTTTGCg < 4:1036375/150‑1 (MQ=255) tactTCGCTGGTATTGACGAAGCGTGCTTCAAGCGCCCGGTCGTGCCTGGCGATCAAATGATCATGGAAGTCACTTTCG‑AAAAAAcg > 2:1562562/1‑87 (MQ=255) tactTCGCTGGTATTGACGAAGCGTGCTTCAAGCGCCCGGTCGTGCCTGGCGATCAAATGATCATGGAAGTCACTTTCG‑AAAAAACGCGCCGCGGCCTGACCCGTTTTAAAGGGGTTGCTCTGGTCGATGGTAAAGTAGTTTGCGAAGCa > 4:1028413/1‑150 (MQ=255) tactTCGCTGGTATTGACGAAGCGTGCTTCAAGCGCCCGGTCGTGCCTGGCGATCAAATGATCATGGAAGTCACTTTCG‑AAAAAACGCGCCGCGGCCTGACCCGTTTTAAAGGGGTTGCTCTGGTCGATGGTAAAGTAGTTTGCGAAGCa > 3:742485/1‑150 (MQ=255) ttCGCTGGTATTGACGAAGCGTGCTTCAAGCGCCCGGTCGTGCCTGGCGATCAAATGATCATGGaa < 2:633162/66‑1 (MQ=255) ttCGCTGGTATTGACGAAGCGTGCTTCAAGCGCCCGGTCGTGCCTGGCGATCAAATGATCATGGAAGTCACTTTCG‑AAAAAACGCGCCGCGGCCTGACCCGTTTTAAAGGGGTTGc < 2:983740/116‑1 (MQ=255) ttCGCTGGTATTGACGAAGCGTGCTTCAAGCGCCCGGTCGTGCCTGGCGATCAAATGATCATGGAAGTCACTTTCG‑AAAAAACGCGCCGCGGCCTGACCCGTTTTAAAGGGGTTGCTCTGGTCGATGGTAAAGTAGTTTGCGAAGCAACg > 4:864895/1‑150 (MQ=255) ttCGCTGGTATTGACGAAGCGTGCTTCAAGCGCCCGGTCGTGCCTGGCGATCAAATGATCATGGAAGTCACTTTCG‑AAAAAACGCGCCGCGGCCTGACCCGTTTTAAAGGGGTTGCTCTGGTCGATGGTAAAGTAGTTTGCGAAGCAACg > 1:656611/1‑150 (MQ=255) tCGCTGGTATTGACGAAGCGTGCTTCAAGCGCCCGGTCGTGCCTgg < 3:85893/46‑1 (MQ=255) tCGCTGGTATTGACGAAGCGTGCTTCAAGCGCCCGGTCGTGCCTgg > 4:85893/1‑46 (MQ=255) cTGGTATTGACGAAGCGTGCTTCAAGCGCCCGGTCGTGCCTGGCGATCAAATGATCATGGAAGTCACTTTCG‑AAAAAACGCGCCGCGGCCTGACCCGTTTTAAAGGGGTTGCTCTGGTCGATGGTAAAGTAGTTTGCGAAGCAACgatga > 4:270088/1‑150 (MQ=255) tGGTATTGAACAAGCGTGCTTCAAGCGCCCGGTCGTGCCTGGTGATCAAATGATCATGGAAGTCACTTTCG‑AAAAAACGCGCCGCGGCCTGACCCGTTTTAAAGGGGTTGCTCTGGTCGATGGTAAAGTAGTTTGCGAAGCAACgatgat < 1:1241907/150‑1 (MQ=255) gTATTGACGAAGCGTGCTTCAAGCGCCCGGTCGTGCCTGGCGATCAAATGATCATGGAAGTCACTTTCG‑AAAAAACGCGCCGCGGCCTGACCCGTTTTAAAGGGGTTGCTCTGGTCGATGGTAAAGTAGTTTGCGAAGCAACGATGAtgt < 1:1099426/150‑1 (MQ=255) aCGAAGCGTGCTTCAAGCGCCCGGTCGTGCCTGGCGATCAAATGATCATGGAAGTCACTTTCGAAAAAAACGCGCCGCGGCCTGACCCGTTTTAAAGGGGTTGCTCTGGTCGATGGTAAAGTAGTTTGCGAAGCAACGATGATGTGTGCt > 3:912130/1‑150 (MQ=255) aCGAAGCGTGCTTCAAGCGCCCGGTCGTGCCTGGCGATCAAATGATCATGGAAGTCACTTTCG‑AAAAAACGCGCCGCGGCCTGACCCGTTTTAAAGGGGTTGCTCTGGTCGAt > 2:494465/1‑113 (MQ=255) aCGAAGCGTGCTTCAAGCGCCCGGTCGTGCCTGGCGATCAAATGATCATGGAAGTCACTTTCG‑AAAAAACGCGCCGCGGCCTGACCCGTTTTAAAGGGGTTGCTCTGGTCGAt < 1:494465/113‑1 (MQ=255) aCGAAGCGTGCTTCAAGCGCCCGGTCGTGCCTGGCGATCAAATGATCATGGAAGTCACTTTCG‑AAAAAACGCGCCGCGGCCTGACCCGTTTTAAAGGGGTTGCTCTGGTCGATGGTAAAGTAGTTTGCGAAGCATCGATGATGTGTGCTc < 2:665465/150‑1 (MQ=255) aGCGTGCTTCAAGCGCCCGGTCGTGCCTGGCGATCAAATGATCATGGAAGTCACTTTCG‑AAAAAACGCGCCGCGGCCTGACCCGTTTTAAAGGGGTTGCTCTGGTCGATGGTAAag > 1:737211/1‑116 (MQ=255) aGCGTGCTTCAAGCGCCCGGTCGTGCCTGGCGATCAAATGATCATGGAAGTCACTTTCG‑AAAAAACGCGCCGCGGCCTGACCCGTTTTAAAGGGGTTGCTCTGGTCGATGGTAAag < 2:737211/116‑1 (MQ=255) | TCCAGGGCCATTTCCCTGGAAAACCGATTTTCCCGGGTGTGCTGATTCTGGAAGCAATGGCACAGGCAACAGGTATTCTGGCGTTTAAAAGCGTAGGAAAACTGGAACCGGGTGAGCTGTACTACTTCGCTGGTATTGACGAAGCGCGCTTCAAGCGCCCGGTCGTGCCTGGCGATCAAATGATCATGGAAGTCACTTTCG‑AAAAAACGCGCCGCGGCCTGACCCGTTTTAAAGGGGTTGCTCTGGTCGATGGTAAAGTAGTTTGCGAAGCAACGATGATGTGTGCTC > NC_000913_3_pae_pgi/202252‑202539 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |