Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_000913_3_pae_pgi	3423707–3424577	3424577	1–871	45 [44]	[44] 46	[rrfD]–[rrlD]	[rrfD],[rrlD]

CCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTA‑AGCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCAAGCTATAGTAAAGGTTCACGGGGTCT  >  NC_000913_3_pae_pgi/3424504‑3424724                                                                           |                                                                                                                                                    cctccGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTACAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTTGCGTACACACTTCt                                                                           >  2:557703/1‑149 (MQ=2) cctccGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGTTCGGCTCCATGCAGACTGGCGTCCAAACTTCt                                                                           >  2:1537457/1‑149 (MQ=11)  ctccGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTa                                                                          >  2:1197110/1‑149 (MQ=31)   tccGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTATATTCGCTTTTGTATGCAGACTGGCGTCCACACTTCTa‑a                                                                        <  1:1197110/149‑1 (MQ=11)       ttACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGAGTCACCGTTCGAACATCAAACATTAAAGGGTGCTAATACAAGGTCGGATCCATGAAGACCGCAGTCCACACTTCTA‑AGCCt                                                                    >  2:611853/1‑149 (MQ=11)         aCTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTA‑AGCCTcc                                                                  >  2:1304871/1‑149 (MQ=32)             tttAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTA‑AGCCTCCCAcc                                                              >  1:14066/1‑149 (MQ=32)             tttAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGCATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTA‑AGCCTCCCAcc                                                              >  2:841842/1‑149 (MQ=17)               tcggaggcGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACAGCAACCATTCAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTA‑AGCCTCCCACCTa                                                            <  2:1073600/147‑1 (MQ=255)                aggaggAGACCGCCCCAGTCAAACTACCCACCAGACACTGTACGCCACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTA‑AGCCTCCCACCTAt                                                           <  2:340778/149‑1 (MQ=17)                     gagaCCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTA‑AGCCTCCCACCTATCCTac                                                      >  1:1377505/1‑149 (MQ=32)                             cccAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTACAGGGTGGTATTTCAAGGTAGGCTCCATGCAGACTGGCGTCCACACTTCTA‑AGCTTCCCACCTATGCTCCCCATCAAg                                              >  2:596810/1‑149 (MQ=11)                             cccAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTA‑AGCCTCCCACCTATCCTACACATCAAg                                              <  1:1002843/149‑1 (MQ=32)                              ccAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTCAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTA‑AGCCTCCCCCCTATCCTACACATCACgg                                             >  2:1338931/1‑149 (MQ=12)                               cAGTCAAACTACCTACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTA‑AGCCTccc                                                                 >  1:1265788/1‑128 (MQ=18)                               cAGTCAAACTACCTACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTA‑AGCCTccc                                                                 <  2:1265788/128‑1 (MQ=18)                                   caaatgaCCCACCAGACACGTGCTGCAAGCCTGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTA‑AGCCTCCCACCTATCCTACACATCAAGGCTCaa                                        <  1:699324/143‑1 (MQ=11)                                   cAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTA‑AGCCTCCCACCTATCCTACACATCAAGGCTCaa                                        <  1:113071/149‑1 (MQ=32)                                   cAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTA‑AGCCTCCCACCTATCCTACACATCAAGGCTCaa                                        <  2:1180189/149‑1 (MQ=32)                                     aaCTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTA‑AGCCTCCCACCTATCCTACACATCAAGGCTCAGTg                                      >  1:99849/1‑149 (MQ=17)                                          cccACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTA‑AGCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAg                                 <  2:75363/149‑1 (MQ=32)                                            ccccaGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTA‑AGCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAgtg                               <  1:522152/147‑1 (MQ=17)                                            caccaGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTA‑AGCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAgtg                               <  2:567693/149‑1 (MQ=32)                                              ccaGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATGAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATACAGACTGGCGTCCACACTTCTA‑AGCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTc                             >  2:1452651/1‑149 (MQ=17)                                               caGCCACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAATATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGAGTCCACACTTCTA‑AGCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCa                            <  1:1343457/149‑1 (MQ=12)                                                 gACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAGGGGTGGTATTTCAAGGTCGGCTCGATGCAGACTGGCGTCCACACTTCTA‑AGCCTCCCCCCTATCCTACCCCTCAGGGCTCAATGTTCGGTGTCAAg                          >  2:1245111/1‑149 (MQ=11)                                                          tgctaCCCGTATTACGGGTCAACGTTAGAACATCTAACTTTGCAGGGCGGTATATGAGGGTGGGCTCCAGGCATGCTAGCTTCCACAATTCTA‑AGCCTGCCACCTATTCTAGACATCCACGCTCACTTTTCGGTGTGCCGCTATAGTaa                 >  2:1049905/5‑149 (MQ=2)                                                           gCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTA‑AGCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCAAGCTATAg                    <  1:1317496/145‑1 (MQ=32)                                                           gCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTA‑AGCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCAAGCTATAg                    >  2:1317496/1‑145 (MQ=32)                                                           ccAACCCCGAGTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGTTGTCCTCACGTCTA‑AGCCTCCAACCAGACCTACACATCAAGGCTCAATGTTCAGTGTCAAGCTATAGTaaa                <  2:1005458/148‑1 (MQ=11)                                                            cAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTA‑AGCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCAAGCTATAGTAAAg               <  1:92329/149‑1 (MQ=32)                                                             aaCCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTA‑AGCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAgt                                <  2:1376916/131‑1 (MQ=32)                                                             aaCCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTA‑AGCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAgt                                >  1:1376916/1‑131 (MQ=33)                                                              aCCCGGATGACGGGACAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTTGTGT‑TTTAATGATACGGCGACCAACGAAACCTACACATCAAGGCTCAATGTTCAGTGTCAAGCTATAGTAAAGGt             <  2:457914/149‑1 (MQ=0)                                                               cccGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTA‑AGCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCAAGCTATAGTAAAGGtt            >  2:1592906/1‑149 (MQ=32)                                                                ccGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTA‑AGCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCAAGCTATAGTAAAGGTTc           >  1:1201740/1‑149 (MQ=32)                                                                  ggATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTA‑AGCCTCCCACCTATCCTAGACATCAAGGCTCAATGTTCAGTGTCAAGATATACTAAACGTTCaa         >  1:364271/1‑148 (MQ=255)                                                                  ggATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTA‑AGCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCAAGCTATAGTAAAGGTTCAc         <  1:1304871/149‑1 (MQ=32)                                                                    aTTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTA‑AGCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCAAGCTATAGTAAAGGTTCACgg       >  1:971476/1‑149 (MQ=32)                                                                    aTTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTA‑AGCCTCCCACCCATCCTACACATCAAGGCTCAATGTTCAGTGTCAAGCTATAGTAAAGGTTCACgg       <  1:557703/149‑1 (MQ=17)                                                                     ttACGGGTCAACGTTAGAACATCAAAGAGTAGAGGGTGGTAGTTCACGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTA‑AGCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCAAGCTATAGTAAAGGTTCACggg      <  1:215808/149‑1 (MQ=11)                                                                     ttACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTA‑AGCCTCCCACCTATCCTACACATCAAGGCGCAATGTTCAGTGTCAAGCTATAGTAAAGGTTCACggg      <  1:393823/149‑1 (MQ=17)                                                                        cGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCGCACTTCTA‑AGCCTCCCACCTATCCGACACATCAAGGCTCAATGTCCAGTGTCAGCCTATAGTAAAGCTAAACGGGCTc   >  2:256362/1‑149 (MQ=11)                                                                         gggTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTA‑AGCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCAAGCTATAGTAAAGGTTCACGGGctct  >  1:495911/1‑149 (MQ=17)                                                                           gTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTA‑AGCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCAAGCtata                     >  2:996063/1‑128 (MQ=33)                                                                           gTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTA‑AGCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCAAGCtata                     <  1:996063/128‑1 (MQ=33)                                                                           |                                                                                                                                                    CCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTA‑AGCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCAAGCTATAGTAAAGGTTCACGGGGTCT  >  NC_000913_3_pae_pgi/3424504‑3424724

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑