New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913_3_hsa_tpiA	1611571 =	45 (0.750)	6 (0.100)	6/274	7.5	9.9%	coding (284/948 nt)	yneF	putative membrane‑bound diguanylate cyclase
	?	NC_000913_3_hsa_tpiA	1611609 =	66 (1.130)					coding (246/948 nt)	yneF	putative membrane‑bound diguanylate cyclase
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

CTTCATTAGCGAATTGATCGCTGCCACGCTAAAAGAAACCATAATTGGGCATATCGCCATCGTGGCAATACCGAGACGTGCGGAGAACATTTGCGGAATGGA‑GA‑ACGGCGAACCGACCGAGATATCAATCACCGAATTTGCCACCAGTACGATTTCCACCGCACCGGTGACAAAGGTCAACAGACATGTTACCTGCGGCGTATAGCGCACTGCACACCAGATTAATGCAGGCAGCGGGAACGCCAGACTCCCCGCTCCGCCAATGACTACCGAGGCAATAACCGA  >  NC_000913_3_hsa_tpiA/1611435‑1611719                                                                                                                                           |                                                                                                                                                     cTTCATTAGCGAATTGATCGCTGCCACGCTAAAAGAAACCATAATTCGTCATATCGCCATCGTGGCAATACCGAGACGTGCGGAGAACATTTGCGGAATGGA‑GA‑ACGGCGAACCGACCGAGATATCAATCACCGAATTTGCCACCAGTa                                                                                                                                          <  1:199328/149‑1 (MQ=255)     aTTAGCGAATTGATCGCTGCCACGCTAAAAGAAACCATAATTGGGCATATCGCCATCGTGGCAATACCGAGACGTGCGGAGAACATTTGCGGAATGGA‑GA‑ACGCCGAACCGACCGAGATACCAATCCCCCAATCTCCCACCAGTACGAt                                                                                                                                      >  2:158151/1‑149 (MQ=255)         gCGAATTGATCGCTGCCACGCTAAAAGAAACCATAATTGGGCATATCGCCATCGTGGCAATACCGAGACGTGCGGAGAACATTTGCGGAATGGA‑GA‑ACGGCGAACCGACCGAGATATCAATCACCGAATTTGCCACCAGTACGATTTcc                                                                                                                                  >  1:226779/1‑149 (MQ=255)         gCGAACTGATCGCTGGCATGTTAAAAGAAACCATAAACGGTTATATCGCCGGCGTGGCAATACCGAGACGTGCGGAGAACATTTTTTTTTTTAATGATACGGCG‑ACC‑ACCGAGATATCAATCACCGAATTTGCCACCAGTACGATTTcc                                                                                                                                  <  2:306923/149‑1 (MQ=255)                   cGCTGCCACGCTAAAAGAAACCATAAGTGGGCATATCACCATCGTGGCAATACCGAGACGTGCGGAGAACATTTGCGGAATGGA‑GA‑ACGGCGAACCGACCGAGATATCAATCACCGAATTTGCCACCAGTACGATTTCCACCGCACCgg                                                                                                                        <  1:295397/149‑1 (MQ=255)                    gCTGCCACGCTAAAAGAAACCATAATTGGGCATATCGCCATCGTGGCAATACCGAGACGTGCGGAGAACATTTGCGGAATGGA‑GA‑ACGGCGAACCGACCGAGATATCAATCACCGAATTTGCCACCAGTACGATTTCCACCGCACCGGt                                                                                                                       <  2:548859/149‑1 (MQ=255)                          aCGCTAAAAGAAACCATAATTGGGCATATCGCCATCGTGGCAATACCGAGACGTGCGGAGAACATTTGCGGAATGGA‑GA‑ACGGCGAACCGACCGAGATATCAATCACCGAATTTGCCACCAGTCCGCTTTCCACCGCACCGATGAaaaa                                                                                                                 >  2:429683/1‑149 (MQ=255)                           ccacaaaaGCAACCCTCATGGGTAATATCGCCATTGTGGGAATACCTAGACGTGCGGAGAACTTTTGCTGTTTTAA‑GG‑ACAGCGCACCCACCGAGATATCAATCACCGAATTTGCCACCAGTACGATTTCCACCGCACCGGTGACAAAg                                                                                                                <  2:872357/145‑1 (MQ=255)                           cGCTAAAAGAACCCATAAGTGGGCATATCGCCATTGTGGCAATACCGAGACGTGCGGAGAACATTTTTTTATTGAA‑TA‑ACGCCGAGACGACCGAGATATCAATCACCGAATTTGCCACCAGTACGATTTCCACCGCACCGGTGACAAAg                                                                                                                <  2:140462/149‑1 (MQ=255)                            gCTAAAAGAAACCATAATTGGGCATATCGCCATCGTGGCAATACCGAGACGTGCGGAGAACATTTGCGGAATGGA‑GA‑ACGGCGAACCGACCGAGATATCAATCACCGAATTTGCCACCAGTACGATTTCCACCACACCGGTGACAAAgg                                                                                                               >  1:98597/1‑149 (MQ=255)                                aaaGAAACCATAATTGGGCATATCGCCATCGTGGCAATACCGAGACGTGCGGAGAACATTTGTGGAATGGA‑GA‑ACGGCGAACCGACCGAGATATCAATCACCGAATTTGCCACCAGTACGATTTCCGCCGCACCGGTGACAAAGGTCaa                                                                                                           >  1:142105/1‑149 (MQ=255)                                 aaGAAACCATAATTGGGCATATCGCCATCGTGGCAATACCGAGACGTGCGGAGAACATTTGCGGAATGGA‑GA‑ACGGCGAACCGACCGAGATATCAATCACCGAATTTGCCACCAGTACGATTTCCACCGCACCGGTGACAAAGGTCAAc                                                                                                          >  2:829720/1‑149 (MQ=255)                                        cATAATTGGGCATATCGCCATCGTGGCAATACCGAGACGTTCGGAGAACATTTTCGGAATGGA‑AA‑ACAGCGAACCGACCGAGATATCAATCACCGAATTTGCCACCAGTACAATTTCAACCCCACCGGTGACAAAGGTCAACAGACATg                                                                                                   >  1:286481/1‑149 (MQ=255)                                             ttGGGCCTATCGCCATCGTGGCAATACCGAGACGTGCGGAGAACATTTGCGGAATGGA‑GA‑ACGGCGAACCGACCGAGATATCAATCACCGAATTTGCCACCAGTACGATTTCCACCGCACCGGTGACAAAGGTCAACAGACATGTTAcc                                                                                              <  1:823855/149‑1 (MQ=255)                                               gggCATTTTGCCATCGTGGCAATACCGAGACGTGCGGAGAACATTTGCGGAATGGA‑GA‑ACGGCGAACCGACCGAGATATCAATCACCGAATTTGCCACCAGTACGATTTCCACCGCACCGGTGACAAAGGTCAACAGACATGTTACCTg                                                                                            <  2:295735/149‑1 (MQ=255)                                                   atatCGCCATCGTGGCAATACCGAGACGTGCGGAGAACATTTGCGGAATGGA‑GA‑ACGGCGAACCGACCGAGATATCAATCACCGAATTTGCCACCAGTACGATTTCCACCGCACCGGTGACAAAGGTCAACAGACATGTTACCTgcggc                                                                                        <  1:60345/149‑1 (MQ=255)                                                      tCGCCATCGTGGCAATACCGAGACGTGCGGAGAACATTTGCGGAATGGA‑GA‑ACGGCGAACCGACCGAGATATCAATCACCGAATTTGCCACCAGTACGATTTCCACCGCACCGGTGACAAAGGTCAACAGACATGTTACCTGCGGCGta                                                                                     >  1:292561/1‑149 (MQ=255)                                                         ccATCGTGGCAATACCGAGACGTGCGGAGAACATTTGCGGAATGGA‑GA‑ACGGCGAACCGACCGAGATATCAATCACCGAATTTGCCACCAGTACGATTTCCACCGCACCGGTGACAAAGGTCAACAGACATGTTACCTGCGGCGTATAg                                                                                  >  1:535060/1‑149 (MQ=255)                                                              gTGGCAATACCGAGACGTGCGGAGAACATTTGCGGAATGGA‑GA‑ACGGCGAACCGACCGAGATATCAATCACCGAATTTGCCACCAGTACGATTTCCACCGCACCGGTGACAAAGGTCAACAGACATGTTACCTGCGGCGTATAGCGCAc                                                                             >  1:1036986/1‑149 (MQ=255)                                                                ggCAATACCGAGACGTGCGGAGAACATTTGCGGAATGGA‑GA‑ACGGCGAACCGACCGAGATATCAATCACCGAATTTGCCACCAGTACGATTTCCACCGCACCGGTGACAAAGGTCAACAGACATGTTACCTGCGGCGTATAGCGCACTg                                                                           <  1:829720/149‑1 (MQ=255)                                                                   aaTACCGAGACGTGCGGAGAACATTTGCGGAATGGA‑GA‑ACGGCGAACCGACCGAGATATCAATCACCGAATTTGCCACCAGTACGATTTCCACCGCACCGGGGACAAAGGTCAACAGACATATTACCTGCGGCGTATAGCGCACTGcac                                                                        >  1:1011280/1‑149 (MQ=255)                                                                              gTGCGGAGAACATTTGCGGAATGGA‑GA‑ACGGCGAACCGACCGAGATATCAATCACCGAATTTGCCACCAGTACGATTTCCACCGCACCGGTGACAAAGGTCAACAGACATGTTACCTGCGGCGTATAGCGCACTGCACACCAGATTAAt                                                             <  2:982612/149‑1 (MQ=255)                                                                                 cGGAGAACATTTGTGTAATTGA‑GA‑ACACAGAAACCAGCGAGATATCAATCACCGAATTTGCCACCAGTACGATTTCCACCGAACCGGGGACAAAGGTCAACAGACATGTTACCTGCGGCGTATAGCGCACTGCACACCAGATTAATgca                                                          <  2:620463/149‑1 (MQ=255)                                                                                  ggAGAACATTTGCGGAATGGA‑GA‑ACGGCGAACCGACCGAGATATCAATCACCGAATTTGCCACCAGTACGATTTCCACCGCACCGGTGACAAAGGTCAACAGACATGTTACCTGCGGCGTATAGCGCACTGCACACCAGATTAATgcag                                                         >  1:591581/1‑149 (MQ=255)                                                                                   gagaACATTTGCGGAATGGA‑GA‑ACGGCGAACCGACCGAGATATCAATCACCGAATTTGCCACCAGTACGATTTCCACCGCACCGGTGACAAAGGTCAACAGACATGTTACCTTCAGCGTATACCGCACCGCACACAACATTAATgcagg                                                        >  1:760748/1‑149 (MQ=255)                                                                                         aTTTGCGGAATGGA‑GA‑ACGGCGAACCGACCGAGATATCAATCACCGAATTTGCCACCAGTACGATTTCCACCGCACCGGTGACAAAGGTCAACAGACATGTTACCTGCGGCGTATAGCGCACTGCCCACAAGGTTGATGCAGGCAGCgg                                                  >  1:127772/1‑149 (MQ=255)                                                                                         aTTTGCGGAATGGA‑GA‑ACGGCGAACCGACCGAGATATCAATCACCGAATTTGCCACCAGTACGATTTCCACCGCACCGGTGACAAAGGTCAACAGACATGTTACCTGCGGCGTATAGCGCACTGCACACCAGATTaa                                                              >  1:108684/1‑137 (MQ=255)                                                                                         aTTTGCGGAATGGA‑GA‑ACGGCGAACCGACCGAGATATCAATCACCGAATTTGCCACCAGTACGATTTCCACCGCACCGGTGACAAAGGTCAACAGACATGTTACCTGCGGCGTATAGCGCACTGCACACCAGATTaa                                                              <  2:108684/137‑1 (MQ=255)                                                                                             gCGGAATGGA‑GA‑ACGGCGAACCGACCGAGATATCAATCACCGAATTTGCCACCAGTACGATTTCCACCGCACCGGTGACAAAGGTCAACAGACATGTTACCTgcggc                                                                                        >  2:140618/1‑107 (MQ=255)                                                                                             gCGGAATGGA‑GA‑ACGGCGAACCGACCGAGATATCAATCACCGAATTTGCCACCAGTACGATTTCCACCGCACCGGTGACAAAGGTCAACAGACATGTTACCTgcggc                                                                                        <  1:140618/107‑1 (MQ=255)                                                                                             gCGGAATGGA‑GA‑ACGGCGAACCGACCGAGATATCAACCACCGAATTTGCCACCAGTACGATTTCCACCGCACCGGTGACAAAGGTCAACAGACATGTTACCTGCGGCGTATAGCGCACTGCACACCAGATTAATGCAGGCAGCGGGAAc                                              <  1:236694/149‑1 (MQ=255)                                                                                                 aaTGGA‑GA‑ACGGCGAACCGACCGAGATATCAATCACCGAATTTGCCACCAGTACGATTTCCACCGCACCGGTGACAAAGGTCAACAGACATGTTACCTGCGGCGTATAGCGCACTGCACACCAGATTAATGCAGGCAGCGGGAACGCCa                                          <  2:1036986/149‑1 (MQ=255)                                                                                                   tGGA‑GA‑ACGGCGAACCGACCGAGATATCAATCACCGAATTTGCCACCAGTACGATTTCCACCGCACCGGTGACAAAGGTCAACAGACATGTTACCTGCGGCGTATAGCGCACTGCACACCAGATTAATGCAGGCAGCGGGAACGCCAGa                                        <  2:535060/149‑1 (MQ=255)                                                                                                             agCGAACCGAACGAGATATAAATCACCGAATTAGCCACCAGTACGATTTCCACCGCACCGGTGACAAAGGTCAACAGACATGTTACCTGCGGCGTATAGCGCACTGCACACCAGATTAATGCAGGCAGCGGGAACGCCAGACTCCCCGc                                <  2:628347/148‑1 (MQ=255)                                                                                                                gAACCGACCGAGATATCAATCACCGAATTTGCCACCAGTACGATTTCCACCGCACCGGTGACAAAGGTCAACAGACATGTTACCTGCGGCGTATAGCGCACTGCACACCAGATTAATGCAGGCAGCCGGAACGCCAGACTACCCGCTca                             >  1:314642/1‑148 (MQ=255)                                                                                                                  accgaccgAGATATCAATCTCCGAATTTGCCACCAGTACGATTTCCACCGCACCGGTGACAAAGGTCAACAGACATGTTACCTGCGGCGTATAGCGCACTGCACACCAGATTAATGCAGGCAGCGGGAACGCCAGACTCCCCGCTCCGc                           <  2:168135/149‑1 (MQ=255)                                                                                                                  accgaccgAGATATCAATCACCGAATTTGCCACCAGTACGATTTCCACCGAACCGGTGACAAAGGTCAACAGACATGTTACCTGCGGCGTCTAGCGCACTGCACACCAGATTAATGCAGGCAGCGGGAACGCCAGCCTCCCCGCTCCGc                           >  2:176766/1‑149 (MQ=255)                                                                                                                      aacgaGATATCAATCACCGAATTTGCCACCAGTACGATTTCCACCGCACCGGTGACAAAGGTCAACAGACATGTTACCTGCGGCGTATAGCGCACTGCACACCAGATTAATGCAGGCAGCGGGAACGCCAGACTCCCCGCTCCGCCAAt                       <  1:80635/147‑1 (MQ=255)                                                                                                                         gagaTATCAATCACCGAATTTGCCACCAGTACGATTTCCACCGCACCGGTGACAAAGGTCAACAGACATGTTACCTGCGGCGTATAGCGCTCTGCACACCAGATTAATGCAGGCAGCGGGAACGCCAGACTCCCCGCTCCGCCAATGAc                    <  1:437723/149‑1 (MQ=255)                                                                                                                          agaTATCAATCACCGAATTTGCCACCAGTACGATTTCCACCGCACCGGTGACAAAGGTCAACAGACATGTTACCTGCGGCGTATAGCGCACTGCACACCAGATTAATGCAGGCAGCGGGAACGCCAGACCCCCCGCCCCGCCAACGACt                   >  2:553731/1‑149 (MQ=255)                                                                                                                                caatcaCCGAATTTGCCACCAGTACGATTTCCACCGCACCGGTGACAAAGGTCAACAGACATGTTACCTGCGGCGTATAGCGCACTGCACACCAGATTAATGCAGGCAGCGGGAACGCCAGACTCCCCGCTCCGCCAATGACTACCGAg             <  1:657817/149‑1 (MQ=255)                                                                                                                                  atcaCCGAATTTGCCACCAGTACGATTTCCACCGCACCGGTGACAAAGGTCAACAGACATGTTACCTGCGGCGTATAGCGCACTGCACACCAGATTAATGCAGGCAGCGGGAACGCCAGACTCCCCGCTCCGCCAATGACTACCGAGGc           <  1:266535/149‑1 (MQ=255)                                                                                                                                      ccGAATTTGCCACCAGTACGATTTCCACCGCACCGGTGACAAAGGTCAACAGACATGTTACCTGCGGCGTATAGCGCACTGCACACCAGATTAATGCAGGCAGCGGGAACGCCAGACTCCCCGCTCCGCCAATGACTACCGAGGCAATa       >  2:192470/1‑149 (MQ=255)                                                                                                                                       cGAATTTGCCACCAGTACGATTTCCACCGCACCGGTGACAAAGGTCAACAGACATGTTACCTGCGGCGTATAGCGCACTGCACACCAGATTAATGCAGGCAGCGGGAACGCCAGACTCCCCGCTCCGCCAATGACTACCGAGGCAATaa      >  1:356252/1‑149 (MQ=255)                                                                                                                                        gAATTTGCCACCAGTACGATTTCCACCGCACCGGTGACAAAGGTCAACAGACATGTTACCTGCGGCGTATAGCGCACTGCACACCAGATTAATGCAGGCAGCGGGAACGCCAGACTCCCCGCTCCGCCAATGACTACCGAGGCAATAAc     <  2:356252/149‑1 (MQ=255)                                                                                                                                           tttGCCACCAGTACGATTTCCACCGCACCGGTGACAAAGGTCAACAGACATGTTACCTGCGGCGTATAGCGCACTGCACACCAGATTAATGCAGGCAGCGGGAACGCCAGACTCCCCGCTCCGCCAATGACTACCGAGGCAATAACCGa  <  2:795141/149‑1 (MQ=255)                                                                                                                                           |                                                                                                                                                     CTTCATTAGCGAATTGATCGCTGCCACGCTAAAAGAAACCATAATTGGGCATATCGCCATCGTGGCAATACCGAGACGTGCGGAGAACATTTGCGGAATGGA‑GA‑ACGGCGAACCGACCGAGATATCAATCACCGAATTTGCCACCAGTACGATTTCCACCGCACCGGTGACAAAGGTCAACAGACATGTTACCTGCGGCGTATAGCGCACTGCACACCAGATTAATGCAGGCAGCGGGAACGCCAGACTCCCCGCTCCGCCAATGACTACCGAGGCAATAACCGA  >  NC_000913_3_hsa_tpiA/1611435‑1611719

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.