| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913_3_hsa_tpiA | 3856874 = | 43 (1.020) | 5 (0.130) | 5/260 | 4.9 | 11.4% | intergenic (+10/+37) | yidI/yidJ | inner membrane protein/sulfatase/phosphatase superfamily protein |
| ? | NC_000913_3_hsa_tpiA | 3856909 = | 38 (0.980) | intergenic (+45/+2) | yidI/yidJ | inner membrane protein/sulfatase/phosphatase superfamily protein | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
GGCATTCGCGGCGCGCTGGTTTTTGGCGGCGGGACGCTGGCTTTCCATACCTTGCTTTTTGGTATCGGCATCGTGTGCAGCATTTTGCTGATATTCCTTATCTTTTCCTTCCTGACCGGCGGTTCACTGGTTTAAGCAGCCTGAATAATGCCCGCCGGGTGATCATCAGCGGGCATTATCGTCAGAACTTCTGTTTTTTCTCCTCCACCTTCACCCCT‑TGTGTCGGTAGGCCGGTGTCATAGTCGCGTACAACTGGCGAATAGCCATCTTGTGGACGTGGAC > NC_000913_3_hsa_tpiA/3856730‑3857011 | ggCATTCGCGGCGCGCTGGTTTTTGGCGGCGGGACGCTGGCTTTCCATACCTTGCTTTTTGGTATCGGCATCGTGTGCAGCATTTTGCTGATATTCCTTATCTTTTCCTTCCTGACCGGCGGTTCACTGGTTTAAGCAGCCTGaataat < 1:62650/149‑1 (MQ=255) cgcgcTGGTTTTTTGCGGCGGGACGTTGGGTTTCCATACCTTGCTTTTTGGTATCGGCATCGTGTGCAGCATTTTGCTGATATTTCTTATCTTTTCCATCCTGACCGGCGGTTCACTGGTTTAAGAAGCCTGAATAATGCCCGCCGGGt < 2:546781/149‑1 (MQ=255) cgcTGGTTTTTGGCGGCGGGACGCTGGCTTTCCATACCTTTCTTTTTGGTATCGGCATCGTGTGCAGCATTTTGCTGATATTCCTTATCTTTTCCTTCCTGACCGGCGGTTCACTGGTTTAAGCAGCCTGAATAATGCCCGCCGGGTGa < 1:315798/149‑1 (MQ=255) cgcTGGTTTTTGGCGGCGGGACGCTGGCTTTCCATACCTTGCTTTTTGGTATCGGCATCGTGTGCAGCATTTTGCTGATATTCCTTATCTTTTCCTTCCTGACCGGCGGTTCACTGGTTTAAGCAGCCTGAATAATGCCCGCCGGGTGa < 1:17161/149‑1 (MQ=255) cgcTGGTTTTTGGCGGCGGGACGCTGGCTTTCCATACCTTGCTTTTTGGTATCGGCATCGTGTGCAGCATTTTGCTGATATTCCTTATCTTTTCCTTCCTGACCGGCGGTTCACTGGTTTAAGCAGCCTGAATAATGCCCGCCGGGTGa < 1:315753/149‑1 (MQ=255) cTGGTTTTTGGCGGCGGGACGCTGGCTTTCCATACCTTGCTTTTTGGTATCGGCATCGTGTGCAGCATTTTGCTGATATTCCTTATCTTTTCCTTCCTGACCGGCGGTTCACTGGTTTAAGCAGCCTGAATAATGCCCGCCGGGTGatc < 2:27010/149‑1 (MQ=255) tttGGCGGCGGGACGCTGGCTTTCCATACCTTGCTTTTTGGTATCGGCATCGTGTGCAGCATTTTGCTGATATTCCTTATCTTTTCCTTCCTGACCGGCGGTTCACTGGTTTAAGCAGCCTGAATAATGCCCGCCGGGTGATCATCAGc < 2:37687/149‑1 (MQ=255) tGGCGGCGGGACGGTGGCTTTCCATACCTTGCTTTTTGGTATCGGCATCGTGTGCAGCATTTTGCTGATATTCCTTATCTTTTCCTTCCTGACCGGCGGTTCACTGGTTTAAGCAGCCTGAATAATGCCCGCCGGGTGATCATCAGCgg < 1:590692/149‑1 (MQ=255) aCGCTGGCTTTCCATACCTTGCTTTTTGGTATCGGCATCGTGTGCAGCATTTTGCTGATATTCCTTATCTTTTCCTTCCTGACCGGCGGTTCACTGGTTTAAGCAGCCTGAATAATGCCCGCCGGGTGATCATCAGCGGGCATTATCGt > 1:259434/1‑149 (MQ=255) gCTGGCTTTCCATACCTTGCTTTTTGTTATCGGCATCGTGTGCAGCATTTTGCTGATATTCCTTATCTTTTCCTTCCTGACCGGCGGTTCACTGGTTTAAGCAGCCTGAATAATGCCCGCCGGGTGATCATCAGCGGGCATTATCGTCa > 2:47513/1‑149 (MQ=255) gCTGGCTTTCCATACATTGCTTTTTGGTCTCGGGAAGGTGTGCAGCATTTTGCTGATGTTCCTTATCTTTTCCTTCTTGACCGGCGGTTCACGGGTTTAAGCAGCCTGAATAATGCCCGCCGTGTGATACTCAGCGGGCATTATCGTCa > 2:440674/1‑149 (MQ=255) tGGCTTTCCATACCTTGCTTTTTGGTATCGGCATCGTGTGCAGCATTTTGCTGATATTCCTTATCTTTTCCTTCCTGACCGGCGGTTCACTGGTTTAAGCAGCCTGAATAATGCCCGCCGGGTGATCATCAGCGGGCATTATCGTCAGa > 2:434529/1‑149 (MQ=255) gttCCATACCTTGCTTGGTGGTGGCGGCGTCGTGTGCAGCATTGTGCTGATATTCCTTATCTTTTCCTTCCTGACCGGCGGTTCACTGGTTTAAGCAGCCTGAATAATGCCCGCCGGGTGATCGTCAGCGGGCATTATCGTCAGAACtt < 2:408912/148‑1 (MQ=255) ccATACCTTGCTTTTTGGTATCGGGAGTGTGTGCAGCATTTTGCTGATATTCCTTATCTTTTCCTTCCTGACCGGCGGTTCACTGGTTTAAGCAGCCTGAATAATGCCCGCCGGGTGATCATCAGCGGGCATTATCGTCAGAACTTCTg < 2:279598/149‑1 (MQ=255) cTTGCTTTTTGGTATCGGCATCGTGTGCAGCATTTTGCTGATATTCCTTATCTTTTCCTTCCTGACCGGCGGTTCACTGGTTTAAGCAGCCTGAATAATGCCCGCCGGGTGATCATCAGCGGGCATTATCGTCAGAACTTCTGtttttt > 1:87686/1‑149 (MQ=255) ttGCTTTTTGGTATCGGCATCGTGTGCAGCATTTTGCTGATATTCCTTATCTTTTCCTTCCTGACCGGCGGTTCACTGGTTTAAGCAGCCTGAATAATGCCCGCCGGGTGATCATCAGCggg < 1:51342/122‑1 (MQ=255) ttGCTTTTTGGTATCGGCATCGTGTGCAGCATTTTGCTGATATTCCTTATCTTTTCCTTCCTGACCGGCGGTTCACTGGTTTAAGCAGCCTGAATAATGCCCGCCGGGTGATCATCAGCggg > 2:51342/1‑122 (MQ=255) ttGCTTTTTGGTATCGGCATCGTGTGCAGCATTTTGCTGATATTCCTTATCTTTTCCTTCCTGACCGGCGGTTCACTGGTTTAAGCAGCCTGAATAATGCCCGCCGGGTGATCATCAGCGGGCATTATCGTCAGAACTTCTGTTTTTtc > 2:186733/1‑149 (MQ=255) tttttGGTATCGGCATCGTGTGCAGCATTTTGCTGATATTCCTTATCTTTTCCTTCCTGACCGGCGGTTCACTGGTTTAAGCAGCCTGAATAATGCCCGCCGGGTGATCATCAGCGGGCATTATCGTCAGAACTTCTGTTTTTTctcct < 1:384935/149‑1 (MQ=255) tGGTATCGGCATCGTGTGCAGCATTTTGCTGATATTCCTTATCTTTTCCTTCCTGACCGGCGGTTCACTGGTTTAAGCAGCCTGAATAATGCCCGCCGGGTGATCATCAGCGGGCATTATCGTCAGAACTTCTGTTTTTTCTCCTCCAc < 1:270953/149‑1 (MQ=255) cGGCATCGTGTGCAGCATTTTGCTGATATTCCTTATCTTTTCCTTCCTGACCGGCGGTTCACTGGTTTAAGCAGCCTGAATAATGCCCGCCGGGTGATCATCAGCGGGCATTATCGTCAGAACTTCTGTTTTTTCTCCTCCACCTTCAc < 1:47513/149‑1 (MQ=255) cGGCATCGTGTGCAGCATTTTGCTGATATTCCTTATCTTTTCCTTCCTGACCGGCGGTTCACTGGTTTAAGCAGCCTGAATAATGCCCGCCGGGTGATCATCAGCGGGCATTATCGTCAGAACTTCTGTTTTTTCTCCTCCACCTTCAc < 2:500751/149‑1 (MQ=255) tCGTGTGCAGCATTTTGCTGATATTCCTTATCTTTTCCTTCCTGACCGGCGGTTCACTGGTTTAAGCAGCCTGAATAATGCCCGCCGGGTGATCATCAGCGGGCATTATCGTCAGAACTTCTGTTTTTTCTCCTCCACCTTCACCCCt‑t < 1:328427/149‑1 (MQ=255) cgatctgCAGCATTTTGCTGATATTCCTTAGCTTTTCCTTCCTGACCGGCGGTTCACTGGTTTAAGCAGCCTGAATAATGCCCGTCGGGTGATCTCCAACGGGCATTAGCGTCAGAACGTCTGTTTTTTCTCCTCCACCTTCACCCCt‑t < 1:145226/144‑1 (MQ=255) cagcaTTTTGCTGATATTCCTTATCTTTTCCTTCCTGACCGGCGGTTCACTGGTTTAAGCAGCCTGAATAATGCCCGCCGGGTGATCATCAGCGGGCATTCTCGTCCGCACTTCTGTTTTTTCTCCTCCACCTTCCCCCCT‑tgagctcg > 2:145226/1‑143 (MQ=255) cagcaTTTTGCTGATATTCCTTATCTTTTCCTTCCTGACCGGCGGTTCACTGGTTTAAGCAGCCTGAATAATGCCCGCCGGGTGATCATCAGCGGGCATTATCGTCAGAACTTCTGTTTTTTCTCCTCCACCTTCACCCCT‑TGTGTCgg > 1:207321/1‑149 (MQ=255) cagcaTTTTGCTGATATTCCTTATCTTTTCCTTCCTGACCGGCGGTTCACTGGTTTAAGCAGCCTGAATAATGCCCGCCGGGTGATCATCAGCGGGCATTATCGTCAGAACTTCTGTTTTTTCTCCTCCACCTTCACCCCT‑TGTGTCgg < 2:481098/149‑1 (MQ=255) cagcaTTTTGCTGATATTCCTTATCTTTTCCTTCCTGACCGGCGGTTCACTGGTTTAAGCAGCCTGAATAATGCCCGCCGGGTGATCATCAGCGGGCATTATCGTCAGAACTTCTGTTTTTTCTCCTCCACCTTCACCCCT‑TGTGTCgg > 2:118196/1‑149 (MQ=255) agcaTTTTGCTGATATTCCTTATCTTTTCCTTCCTGACCGGCGGTTCACTGGTTTAAGCAGCCTGAATAATGCCCGCCGGGTGATCATCAGCGGGCATTATCGTCAGAACTTCTGTTTTTTCTCCTCCACCTTCACCCCT‑TGTCTCGGt > 1:523642/1‑149 (MQ=255) ttttGCTGATATTCCTTATCTTTTCCTTCCTGACCGGCGGTTCACTGGTTTAAGCAGCCTGAATAATGCCCGCCGGGTGATCATCAGCGGGCATTATCGTCAGAACTTCTGTTTTTTCTCCTCCACCTTCACCCCT‑TGTGTCGGTAGGc < 1:434047/149‑1 (MQ=255) gCTGATATTCCTTATCTTTTCCTTCCTGACCGGCGGTTCACTGGTTTAAGCAGCCTGAATAATGCCCGCCGGGTGATCATCAGCGGGCATTATCGTCAGAACTTCTGTTTTTTCTCCTCCACCTTCACCCCT‑TGTGTCGGTAGGCCGgt < 2:87686/149‑1 (MQ=255) tGATATTCCTTATCTTTTCCTTCCTGACCGGCGGTTCACTGGTTTAAGCAGCCTGAATAATGCCCGCCGGGTGATCATCAGCGGGCATTATCGTCAGAACTTCTGTTTTTTCTCCTCCACCTTCACCCCT‑TGTGTCGGTAGGCCGgtgt > 2:36898/1‑149 (MQ=255) gATATTCCTTATCTTTTCCTTCCTGACCGGCGGTTCACTGGTTTAAGCAGCCTGAATAATGCCCGCCGGGTGATCATCAGCGGGCATTATCGTCAGAACTTCTGTTTTTTCTCCTTCACCTTCACCCCT‑TGTGTCGCTCGGCCGGTGTc > 2:724664/1‑149 (MQ=255) ttATCTTTTCCTTCCTGACCGGCGGTTCACTGGTTTAAGCAGCCTGAATAATGCCCGCCGGGTGATCATCAGCGGGCATTATCGTCAGAACTTCTGTTTTTTCTCCTCCACCTTCACCCCT‑TGTGTCGGTAGGCCGGTGTCATAGTcgc < 2:259434/149‑1 (MQ=255) ttttCCTTCCTGACCGGCGGTTCACTGGTTTAAGCAGCCTGAATAATGCCCGCCGGGTGATCATCAGCGGGCATTATCGTCAGAACTTCTGTTTTTTCTCCTCCACCTTCACCCCT‑TGTGTCGGTAGGCCGGTGTCATAGTCGCGTACa > 2:701139/1‑149 (MQ=255) cttccgGACCGGCGGTTCACTGGTTTAAGCAGCCTGAATAATGCCCGCCGGGTGATCATCAGCGGGCATTATCGTCAGAACTTCTGTGTTTTCTCCTCCACCTTCACCCCT‑TGTGTCGGTAGGCCGGTGTCATAGTCGCGTACAACTgg < 2:239118/149‑1 (MQ=255) ttcctGACCGGCGGTTCACTGGTTTAAGCAGCCTGAATAATGCCCGCCGGGTGATCATCAGCGGGCATTATCGTCAGAACTTCTGTTTTTTCTCCTCCACCTTCACCCCT‑TGTGTCGGTAGGCCGGTGTCATAGTCGCGTACAACTGGc < 1:677505/149‑1 (MQ=255) ttcctGACCGGCGGTTCACTGGTTTAAGCAGCCTGAATAATGCCCGCCGGGTGATCATCAGCGGGCATTATCGTCAGAACTTCTGTTTTTTCTCCTCCACCTTCACCCCT‑TGTGTCGGTAGGCCGGTGTCATAGTCGCGTACAACTGGc < 1:434529/149‑1 (MQ=255) gACCGGCGGTTCACTGGTTTAAGCAGCCTGAATAATGCCCGCCGGGTGATCATCAGCGGGCATTATCGTCAGAACTTCTGTTTTTTCTCCTCCACCTTCACCCCT‑TGTGTCGGTAGGCCGGTGTCATAGTCGCGTACAACTGGCGAATa < 1:678130/149‑1 (MQ=255) cggcggTTCACTGGTTTAAGCAGCCTGAATAATGCCCGCCGGGTGATCATCAGCGGGCATTATCGTCAGAACTTCTGTTTTTTCTCCTCCACCTTCACCCCT‑TGTGTCGGTAGGCCGGTGTCATAGTCGCGTACAACTGGCGAATAGcc < 1:36898/149‑1 (MQ=255) ggTTCACTGGTTTAAGCAGCCTGAATAATGCCCGCCGGGTGATCATCAGCGGGCATTATCGTCAGAACTTCTGTTTTTTCTCCTCCACCTTCACTTCTGCATGATGCT‑TGCCGGTATCATCCTCTCATACAACTGGCGAATAGCCATCt > 1:541199/1‑149 (MQ=255) tAAGCAGCCTGAATAATGCCCGCCGGGTGATCATCAGCGGGCATTATCGTCAGAACTTCTGTTTTTTCTCCTCCACCTTCACCCCT‑TGTGTCGGTAGGCCGGTGTCATAGTCGCGTACAACTGGCGAATAGCCATCTTgtggacgtgga < 1:118196/149‑1 (MQ=255) aaGCAGCCTGAATAATGCCCGCCGGGTGATCATCAGCGGGCATTATCGTCAGAACTTCTGTTTTTTCTCCTCCACCTTCACCCCT‑TGTGTCGGTAGGCCGGTGTCATAGTCGCGTACAACTGGCGAATAGCCATCTTgtggacgtggac < 2:198939/149‑1 (MQ=255) | GGCATTCGCGGCGCGCTGGTTTTTGGCGGCGGGACGCTGGCTTTCCATACCTTGCTTTTTGGTATCGGCATCGTGTGCAGCATTTTGCTGATATTCCTTATCTTTTCCTTCCTGACCGGCGGTTCACTGGTTTAAGCAGCCTGAATAATGCCCGCCGGGTGATCATCAGCGGGCATTATCGTCAGAACTTCTGTTTTTTCTCCTCCACCTTCACCCCT‑TGTGTCGGTAGGCCGGTGTCATAGTCGCGTACAACTGGCGAATAGCCATCTTGTGGACGTGGAC > NC_000913_3_hsa_tpiA/3856730‑3857011 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |