New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913_3_hsa_tpiA	= 761670	43 (1.220)	4 (0.120)	4/270	4.3	8.7%	coding (149/1218 nt)	sucB	dihydrolipoyltranssuccinase
	?	NC_000913_3_hsa_tpiA	= 761713	43 (1.260)					coding (192/1218 nt)	sucB	dihydrolipoyltranssuccinase
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

AGCGTAGATATTCTGGTCCCTGACCTGCCTGAATCCGTAGCCGATGCCACCGTCGCAACCTGGCATAAAAAACCCGGCGACGCAGTCGTACGTGATGAAGTGCTGGTAGAAATCGAAACTGACAAAGTGGTACTGGAAGTACCGGCATCAGCAGACGGCATTCTGGATGCGGTTCTGGAAGATGAAGGTACAACGG‑TAACGTCTCGTCAGATCCTTGGTCGCCTGCGTGAAGGCAACAGCGCCGGTAAAGAAACCAGCGCCAAATCTGAAGAGAAAGCGTCCACTCCGGCG  >  NC_000913_3_hsa_tpiA/761528‑761818                                                                                                                                               |                                                                                                                                                      aGCGTAGGTATTCTGGTCCCGGACCTGCCTGAATCCGTAGCCGATGCCACCGTCGCAACCTGGCATAAAAAACCCGGCGACGCAGTCGTACGTGATGAAGTGCTGGTAGAAATCGAAACTGACAAAGTGGTACTGGAAGTACCGGCATc                                                                                                                                                 <  2:498154/149‑1 (MQ=255)        atatGCGGGTCCGTGACCTGCCTGAATCCTTAGCCGATGCCACCGTCGCAACCTGGCATAAAAAACCCGGCGACGCAGTCTTACGTGATGAAGTGCTGGTAGAAATCGAAACTGACAAAGTGGTACTGGAAGTACCGGCATCAGCAGAc                                                                                                                                          <  2:424220/149‑1 (MQ=255)          atTCTGGTCCCTGACCTGCCTGAATCCGTAGCCGATGCCACCGTCGCAACCTGGCATAAAAAACCCGGCGACGCAGTCGTACGTGATGAAGTGCTGGTAGAAATCGAAACTGACAAAGTGGTACTGGAAGTACCGGCATCAGCAGACgg                                                                                                                                        <  1:570778/149‑1 (MQ=255)              tGGTCCCTGACCTGCCTGAATCCGTAGCCGATGCCACCGTCGCAACCTGGCATAAAAAACCCGGCGACGCAGTCGTACGTGATGAAGTGCTGGTAGAAATCGAAACTGACAAAGTGGTACTGGAAGTACCGGCATCAGCAGACGGCAtt                                                                                                                                    >  2:189063/1‑149 (MQ=255)                   ccTCACCTGCCGGAATCGGGAGCCGACGCCACCGCCGCAACCTGGCATAAAATCCCCGGCGAGGCAGGCGTACGTGATGAAGTGCTGGTAGAAATCGAAACTGACAAAGTGGTACTGGAAGTACCGGCATCAGCAGACGGCATTCTGGa                                                                                                                               <  1:193572/149‑1 (MQ=255)                    cTGACCTGCCTGAATCCGTAGCCGATGCCACCGTCGCAACCTGGCATAAAAAACCCGGCGACGCAGTCGTACGTGATGAAGTGCTGGTAGAAATCGAAACTGACAAAGTGGTACTGGAAGTACCGGCATCAGCAGACGGCATTCTGGAt                                                                                                                              <  1:19516/149‑1 (MQ=255)                       aCCTGCCTGAATCCGTAGGCGATGCCACCGTCGCAACCTGGCATAAAAAACCCGGCGACGCAGTCGTACGTGATGAAGTGCTGGTAGAAATCGAAACTGACAAAGTGGTACTGGAAGTACCGGCATCAGCAGACGGCATTCTGGATGCg                                                                                                                           <  1:322603/149‑1 (MQ=255)                                  tCCGTAGCCGATGCCACCGTCGCAACCTGGCATAAAAAACCCGGCGACGCAGTCGTACGTGATGAAGTGCTGGTAGAAATCGAAACTGACAAAGTGGTACTGGAAGTACCGGCATCAGCAGACGGCATTCTGGATGCGGTTCTGGAAGa                                                                                                                <  2:557199/149‑1 (MQ=255)                                      gaGCCGATGCCACCGTCGCAACCTGGCATAAAAAACCCGGCGACGCAGTCGTACGTGATGAAGTGCTGGTAGAAATCGAAACTGACAAAGTGGTACTGGAAGTACCGGCATCAGCAGACGGCATTCTGGATGCGGTTCTGGAAGATGaa                                                                                                            <  2:251559/148‑1 (MQ=255)                                       aGCCGATGCCACCGTCGCAACCTGGCATAAAAAACCCGGCGACGCAGTCGTACGTGATGAAGTGCTGGTAGAAATCGAAACTGACAAAGTGGTACTGGAAGTACCGGCATCAGCAGACGGCATTCTGGATGCGGTTCTGGAAGATGAAg                                                                                                           <  1:573705/149‑1 (MQ=255)                                       aGCCGATGCCACCGTCGCAACCTGGCATAAAAAACCCGGCGACGCAGTCGTACGTGATGAAGTGCTGGTAGAAATCGAAACTGACAAAGTGGTAATGGAAGTACCGGCATCAGCAGACGGCATTCTGGATGCGGTTCTGGAAGATGAAg                                                                                                           <  1:279614/149‑1 (MQ=255)                                        gCCGATGCCACCGTCGCAACCTGGCATAAAAAACCCGGCGACGCAGTCGTACGTGATGAAGTGCTGGTAGAAATCGAAACTGACAAAGTGGTACTGGAAGTACCGGCATCAGCAGACGGCATTCTGGATGCGGTTCTGGAAGATGAAgg                                                                                                          >  1:9296/1‑149 (MQ=255)                                         ccGATGCCACCGTCGCAACCTGGCATAAAAAACCCGGCGACGCAGTCGTACGTGATGAAGAGATGGCTGGAGTCGAAACTGGGAAAGTGGTACTGGAAGTACCGGCATCAGCAGACGGCATTCTGGATGCGGTTCTGGAAGATGAGGGt                                                                                                         >  1:304413/1‑149 (MQ=255)                                                cACCGTCGCAACCTGGCATAAAAAACACGGAGACGCAGTCGTACGTGATGAAGTGCTGTGAGAAATCGAAACTGACAAAGTGGTACTGGAAGTACCGGCATCAGCAGACGGCATTCTGGATGCGGTTCTGGAAGATGAAGGTACAACgg                                                                                                  >  2:281718/1‑149 (MQ=255)                                                    gTCGCAACCTGGCATAAAAAACCCGGCGACGCAGTCGTACGTGATGAAGTGCTGGTAGAAATCGAAACTGACAAAGTGGTACTGGAAGTACCGGCATCAGCAGACGGCATTCTGGATGCGGTTCTGGAAGATGAAGGTACAACGG‑TAAc                                                                                             <  2:485770/149‑1 (MQ=255)                                                               gCAGAAAAAACCCGGCGACGCAGTCGTACGTGATGAAGTGCTGGTAGAAATCGAAACTGACAAAGTGGTACTGGAAGTACCGGCATCAGCAGACGGCATTCTGGATGCGGTTCTGGAAGATGAAGGTACAACGG‑TAACGTCTCGTCAGa                                                                                  <  2:519045/149‑1 (MQ=255)                                                                     aaaaCCCGGCGACGCAGTCGTACGTGATGAAGTGCTGGTAGAAATCGAAACTGACAAAGTGGTACTGGAAGTACCGGCATCAGCAGACGGCATTCTGGATGCGGTTCTGGAAGATGAAGGTACAACGG‑TAACGTCTCGTCAGATCCTTg                                                                            >  1:152488/1‑149 (MQ=255)                                                                      acaCCCGGCGACGCAGTCGTACGTGATGCAGTGCTGGTAGAAATCGAAACTGACAAACGGGTACTGGAAGTACCGGCATCAGCAGACGGCATTCTGGATGCGGTTCTGGAAGATGAAGGTACAACGG‑TAACGTCTCGTCAGATCCTTgg                                                                           <  1:502103/147‑1 (MQ=255)                                                                                   cAGGCGTACGTGATGAAGTGCTGGTAGAAATCGAAACTGACAAAGTGGTACTGGAAGTACCGGCATCAGCAGACGGCATTCTGGATGCGGTTCTGGAAGATGAAGGTACAACGG‑TAACGTCTCGTCAGATCCTTGGTCGCCTGCGTGaa                                                              <  2:449561/149‑1 (MQ=255)                                                                                      tCGTACGTGATGAAGTGCTGGTAGAAATCGAAACTGACAAAGTGGTACTGGAAGTACCGGCATCAGCAGACGGCATTCTGGATGCGGTTCTGGAAGATGAAGGTACAACGG‑TAACGTCTCGTCAGATCCTTGGTCGCCTGCGTGAAGGc                                                           >  1:530698/1‑149 (MQ=255)                                                                                         tACGTGATGAAGTGCTGGTAGAAATCGAAACTGACAAAGTGGTACTGGAAGTACCGGCATCAGCAGACGGCATTCTGGATGCGGTTCTGGAAGATGAAGGTACAACGG‑TAACGTCTCGTCAGATCCTTGGTCGCCTGCGTGAAGGCAAc                                                        <  2:97664/149‑1 (MQ=255)                                                                                          aCGTGATGAAGTGCCGGGAGAAATCGAAACTGACAAAGGGGTACTGGAAGTACCGGCATCAGCAGACGGCATTCTGGATGCGGTTCTGGAAGATGAAGGTACAACGG‑TAACGTCTCGTCAGATCCTTGGTCGCCTGCGTGAAGGCAACa                                                       <  2:76757/149‑1 (MQ=255)                                                                                                tgaAGTGCTGGTAGAAATCGAAACTGACAAAGTGGTACTGGAAGTACCGGCATCAGCAGACGGCATTCTGGATGCGGTTCTGGAAGATGAAGGTACAACGG‑TAACGTCTCGTCAGATCCTTGGTCGCCTGCGTGAAGGCAACAGCGCCg                                                 <  1:379216/149‑1 (MQ=255)                                                                                                      gCTGGGAGAAATCGAAACTGACAAAGTGGTACTGGAAGTACCGGCATCAGCAGACGGCATTCTGGATGCGGTTCTGGAAGATGAAGGTACAACGG‑TAACGTCTCGTCAGATCCTTGGTCGCCTTTGTGAAGGCAACAGCGCCGGTAAAg                                           <  1:281718/149‑1 (MQ=255)                                                                                                        tGGTAGAAATCGAAACTGACAAAGTGGTACTGGAAGTACCGGCATCAGCAGACGGCATTCTGGATGCGGTTCTGGAAGATGAAGGTACAACGG‑TAACGTCTCGTCAGATCCTTGGTCGCCTGCGTGAAGGCAACAGCGCCGGTAAAGaa                                         <  2:479881/149‑1 (MQ=255)                                                                                                               aaTCGAAACTGACAAAGTGGTACTGGAAGTACCGGCATCAGCAGACGGCATTCTGGATGCGGTTCTGGAAGATGAAGGTACAACGG‑TAACGTCTCGTCAGATCCTTGGTCGCCTGCGTGAAGGCAACAGCGCCGGTAAAGAAACCAacg                                  >  2:391955/1‑149 (MQ=255)                                                                                                                 tCGAAACTGACAAAGTGGTACTGGAAGTACCGGCATCAGCAGACGGCATTCTGGATGCGGTTCTGGAAGATGAAGGTACAACGG‑TAACGTCTCGTCAGATCCTTGGTCGCCTGCGTGAAGGCAACAGCGCCGGTAAAGAAACCAGCGcc                                >  1:418190/1‑149 (MQ=255)                                                                                                                   gAAACTGACAAAGTGGTACTGGAAGTACCGGCATCAGCAGACGGCATTCTGGATGCGGTTCTGGAAGATGAAGGTACAACGG‑TAACGTCTCGTCAGATCCTTGGTCGCCTGCGTGAAGGCAACAGCGCCGGTAAAGAAACCAGCGCCaa                              >  1:138112/1‑149 (MQ=255)                                                                                                                     aaCTGACAAAGTGGTACTGGAAGTACCGACATCAGCAGACGGCATTCTGGATGCGGTTCTGGAAGATGAAGGTACAACGG‑TAACGTCTCGTCAGATCCTTGGTCGCCTGCGTGAAGGCAACAGCGCAGGTAAAGCAACCAACGCCAAAt                            >  2:186582/1‑149 (MQ=255)                                                                                                                        tGACAAAGTGGTACTGGAAGTACCGGCATCAGCAGACGGCATTCTGGATGCGGTTCTGGAAGATGAAGGTACAACGG‑TAACGTCTCGTCAGATCCTTGGTCGCCTGCGTGAAGGCAACAGCGCCGGTAAAGAAACCAGCGCCAAATCTg                         >  1:608208/1‑149 (MQ=255)                                                                                                                        tGACAAAGTGGTACTGGAAGTACCGGCATCAGCAGACGGCATTCTGGATGCGGTTCTGGAAGATGAAGGTACAACGG‑TAACGTCTCGTCAGATCCTTGGTCGCCTGCGTGAAGGCAACAGCGCCGGTAAAGAAACCAGCGCCAAATCTg                         <  1:617676/149‑1 (MQ=255)                                                                                                                          aCAAAGGTGTACGGGAAGTACCGGCATCAGCAGACGGCATTCTGGATGCGGTTCTGGAAGATGAAGGTACAACGG‑TAACGTCTCGTCAGATCCTTGGTCGCCTGCGTGAAGGCAACAGCGCCGGTAAAGAAACCAGCGCCAAATCTGaa                       <  2:242466/149‑1 (MQ=255)                                                                                                                            aaaGTGGTACTGGAAGTACCGGCATCAGCAGACGGCATTCTGGATGCGGTTCTGGAAGATGAAGGTACAACGG‑TAACGTCTCGTCAGATCCTTGGTCGCCTGCGTGAAGGCAACAGCGCCGGTAAAGAAACCAGCGCCAAATCTGAaga                     >  1:242893/1‑149 (MQ=255)                                                                                                                               gTGGTACTGGAAGTACCGGCATCAGCAGACGGCATTCTGGATGCGGTTCTGGAAGATGAAGGTACAACGG‑TAACGTCTCGTCAGATCCTTGGTCGCCTGCGTGAAGGCAACAGCGCCGGTAAAGAAACCAGCGCCAAATCTGAAGAGaa                  <  2:537556/149‑1 (MQ=255)                                                                                                                                      tGGAAGTACCGGCATCAGCAGACGGCATTCTGGATGCGGTTCTGGAAGATGAAGGTACAACGG‑TAACGTCTCGTCAGATCCTTGGTCGCCTGCGTGAAGGCAACAGCGCCGGTAAAGAAAcc                                      <  1:414106/122‑1 (MQ=255)                                                                                                                                      tGGAAGTACCGGCATCAGCAGACGGCATTCTGGATGCGGTTCTGGAAGATGAAGGTACAACGG‑TAACGTCTCGTCAGATCCTTGGTCGCCTGCGTGAAGGCAACAGCGCCGGTAAAGAAAcc                                      >  2:414106/1‑122 (MQ=255)                                                                                                                                      tGGAAGTACCGGCATCAGCAGACGGCATTCTGGATGCGGTTCTGGAAGATGAAGGTACAACGG‑TAACGTCTCGTCAGATCCTTGGTCGCCTGCGTGAAGGCAACAGCGCCGGTAAAGAAACCAGCGCCAAATCTGAAGAGAAAGCGTcc           >  2:80048/1‑149 (MQ=255)                                                                                                                                           gTACCGGCATCAGCAGACGGCATTCTGGATGCGGTTCTGGAAGATGAAGGTACAACGG‑TAACGTCTCGTCAGATCCTTGGTCGCCTGCGTGAAGGCAACAGCGCCGGTAAAGAAACCAGCGCCAACTCTGAAGAGAAAGCGTCCCCTcc      >  2:275524/1‑149 (MQ=255)                                                                                                                                           gTACCGGCATCAGCAGACGGCATTCTGGATGCGGTTCTGGAAGATGAAGGTACAACGG‑TAACGTCTCGTCAGATCCTTGGTCGCCTGCGTGAAGGCAACAGCGCCGGTAAAGAAACCAGCGCCAAATCTGAAGAGAAAGCGTCCACTcc      >  1:475991/1‑149 (MQ=255)                                                                                                                                              ccGGCATCGGCAGACGGCATTCTGGATGCGGTTCTGGAAGATGCA‑GAAGAACGGCGAGTGGGGCGTCAGATCCTTGGTCGCCTGCGTGAAGGCAACACCGACGGTAAAGAAACCAGCGCCCAATCGGCACAGAACACGTCCACTCCgtc   >  2:569460/1‑147 (MQ=255)                                                                                                                                              ccGGCATCAGCAGACGGCATTCTGGATGCGGTTCTGGAAGATGAAGGTACAACGG‑TAACGTTTCGTCAGATCCTTGGTCGCCTGCGTGAAGGCAACAGCGCCGGGAAAGAAACCGGCGCCAAATCTGCAGGGAAAGGGTCCACCCCGgc   >  2:569473/1‑149 (MQ=255)                                                                                                                                               cGGCATCAGCAGACGGCATTCTGGATGCGGTTCTGGAAGATGAAGGTACAACGG‑TAACGTCTCGTCAGATCCTTGGTCGCCTGCGTGAAGGCAACAGCGCCGGTAAAGAAACCAGCGCCAAATCTGAAGAGAAAGCGTCCACTCCGgcg  >  1:427036/1‑149 (MQ=255)                                                                                                                                               cGGCATCAGCAGACGGCATTCTGGATGCGGTTCTGGAAGATGAAGGTACAACGG‑TAACGTCTCGTCAGATCCTTGGTCGCCTGCGTGAAGGCAACAGCGCCGGTAAAGAAACCAGCGCCAAATCTGAAGAGAAAGCGTCCACTCCGgcg  >  1:611214/1‑149 (MQ=255)                                                                                                                                               |                                                                                                                                                      AGCGTAGATATTCTGGTCCCTGACCTGCCTGAATCCGTAGCCGATGCCACCGTCGCAACCTGGCATAAAAAACCCGGCGACGCAGTCGTACGTGATGAAGTGCTGGTAGAAATCGAAACTGACAAAGTGGTACTGGAAGTACCGGCATCAGCAGACGGCATTCTGGATGCGGTTCTGGAAGATGAAGGTACAACGG‑TAACGTCTCGTCAGATCCTTGGTCGCCTGCGTGAAGGCAACAGCGCCGGTAAAGAAACCAGCGCCAAATCTGAAGAGAAAGCGTCCACTCCGGCG  >  NC_000913_3_hsa_tpiA/761528‑761818

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.