| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913_3_hsa_tpiA | = 781277 | 53 (1.260) | 4 (0.130) +TTATCCTTCACGCTTAACATCTGAGTTTGATGTTAAAAC |
4/208 | 4.4 | 10.1% | intergenic (+55/‑92) | lysY/lysZ | tRNA‑Lys/tRNA‑Lys |
| ? | NC_000913_3_hsa_tpiA | = 781652 | 45 (1.070) | noncoding (76/76 nt) | lysQ | tRNA‑Lys | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
CGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATAC‑TCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCAC > NC_000913_3_hsa_tpiA/781520‑781799 | cGAGTCATGCTGCACGACCCACCATCCTGAATTATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGccc < 1:213198/149‑1 (MQ=255) gAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCt > 1:197996/1‑149 (MQ=255) cATCCTGCACGACCCACCATCCTGAAAGAAAAAGGAAGAATAATCCCGCAAGGGGTCGTTAGCACAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGAAAAAAAAAAAAAAAAAAGCGCCCTAAAg < 2:567594/149‑1 (MQ=18) tcatGCACGACCCACAATCCTGAATAATTAAAGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGCGGGTAGCACAGTAGCATTTTACTCAATTGGTCGCAGGTTCGCATCCTGCACGACCCCCCAATGTATAAACGCGCCATAAAGgc > 2:330826/4‑149 (MQ=18) cTGCACGACCCACCATCCTGCATGATTAAGCCAACATAAACCCGCCAGGAAACCTTAGCCCAGTTGGTAGAGCCGTTGACTTTTAACCAATTGGTCGCAGGTTCGCATCCTGCCCGCCCCACCAATGTAACAAAGCGCCCCAAAgcggc > 2:525305/1‑145 (MQ=255) cTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAATTGATAGAGCAGTTGACTATTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCCCCAACGTAAAAAAACGCCCTAACGgcgc > 2:211963/1‑149 (MQ=21) gCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGGTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCtt < 1:399029/149‑1 (MQ=255) cACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCttt > 1:455645/1‑149 (MQ=255) gACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCtttttt < 1:237965/149‑1 (MQ=255) aCCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTg > 1:638606/1‑149 (MQ=255) cccACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGc > 1:30063/1‑149 (MQ=255) caccaTCCTGAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTa > 1:722074/1‑149 (MQ=255) acaatacTGAATGATAAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTAt > 2:200005/7‑149 (MQ=255) cgaTCCTGAATGATTAAGGCAGCAGAAACACGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATAAATGGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATc < 2:261791/147‑1 (MQ=17) tGATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCCCGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGCTAC‑Tc > 1:127525/1‑149 (MQ=255) gATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCACTAAAGGCGCTTTTTTGCTATCTGCGATAC‑TCa < 1:721739/149‑1 (MQ=255) aaGGCAGCGGAATCCCCCAAGGGGTAGTCAGCCCAGTTCGTAGTGCAGTTGACCTTTAATCAACTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATAC‑TCAAAGa < 2:163766/149‑1 (MQ=14) gcaTAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATAC‑TCAAAGATTCGaa < 1:200005/149‑1 (MQ=255) tCCCGCAATGGGTCGTTAGCTTTGTTTGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATAC‑TCAAAGATTCGAACCTgca > 2:706838/1‑149 (MQ=255) tCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATAC‑TCCAAGATTCGAACCTgca > 1:380969/1‑149 (MQ=255) ccGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGCCCCTTTTTTGCTATCTGCGATAC‑ACAAAGATTCGCACCTgccgc > 2:354576/1‑149 (MQ=11) gCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATAC‑TCAAAGATTCGAACCTGcagcag < 2:538737/149‑1 (MQ=37) ggTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGATCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCATTTTTGCTATCTCCGATAC‑TCAAAGATTCGAACCTGCAGCAGGTttga > 1:135837/1‑149 (MQ=12) gTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTAATAGCTATCTGCGATAC‑TCAAAGATTCGAACCTGCAGCAGTTttgagttg > 1:467238/1‑149 (MQ=255) ttAGCTCAGTTGGTAGAGGAGGTGACTTTTAATCAATTGCTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATAC‑TCAAAGATTCGAACCTGCAGCAGGTttgagttga < 2:597654/149‑1 (MQ=12) ttAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATAC‑TCAAAGATTCGAACCTGCAGCAGGTttgagttga < 1:29203/149‑1 (MQ=32) aGTTGGTAGGGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATAC‑TCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGc < 1:555226/149‑1 (MQ=17) gTAGCGCCGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCGGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATAC‑TCAAAGATTCGAACCTGAAGCAGGTTTGAGTTGAGCGCAGCGAaac > 2:436694/1‑149 (MQ=255) gagCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATAC‑TCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAaacaac < 1:226418/149‑1 (MQ=32) agCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATAC‑TCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACg < 1:581026/149‑1 (MQ=32) ttttAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTTCAAAG‑TTCGAACCTGCAGCAGGTTTGAGTTGAAGGCAGCGAACGAACGGTGCCGCTcg > 1:315862/1‑149 (MQ=11) ttttAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATAC‑TCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTcg > 2:600477/1‑149 (MQ=32) ttttAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATAC‑TCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTcg > 2:396408/1‑149 (MQ=32) tAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATAC‑TCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCgcgg < 2:722074/149‑1 (MQ=32) ccattttgTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATTC‑TCCAACTTTCGATCGTGCAGCTGGTTTTAGTTAAGCATCACGAAACAACGGCGCCGCTCGCGgaga > 2:142622/8‑149 (MQ=11) tGGTAGCAGGGTCGAATCGTGCAAGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATAC‑TCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCATCGAAACAACGGAGCCGCTCGCGGCGACGGcc < 2:346294/149‑1 (MQ=11) tCGCAGGCTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATAC‑TCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGa > 1:331986/1‑149 (MQ=17) cGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATAC‑TCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGaa < 1:172820/149‑1 (MQ=32) gCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATAC‑TCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGACCCGaaa > 1:127838/1‑148 (MQ=17) cAGGTCCGAATCCTGCACGACCCACCAATGTAAAAAAGCGATCTTAAGTCCTTTTTTTGCTATCGGCGATAC‑TCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAgg < 1:99203/149‑1 (MQ=11) gcGAATCCTGCACCACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATAC‑TCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGCGCTGCTCGCTGCGACGGCCTGAAGGgcgag < 1:709015/148‑1 (MQ=11) cTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATAC‑TCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGagcgaa > 2:38011/1‑146 (MQ=32) cTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATAC‑TCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGagcgaa < 1:38011/146‑1 (MQ=32) gCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATAC‑TCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAg < 2:511391/149‑1 (MQ=32) aaaTGTAAAAAAGCGCCCCAAAGGCGCTTTTTTGCTATTTGAAATAC‑TCAAAGATTCGAACCTGTAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCCGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCAc < 2:319838/148‑1 (MQ=11) | CGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATAC‑TCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCAC > NC_000913_3_hsa_tpiA/781520‑781799 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |