| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 1158504 = | 39 (0.800) | 15 (0.340) +CAGATTGGTGAATA |
15/250 | 2.5 | 28.9% | coding (636/1434 nt) | ptsG | fused glucose‑specific PTS enzymes: IIB component/IIC component |
| ? | NC_000913 | = 1158538 | 43 (0.880) | coding (670/1434 nt) | ptsG | fused glucose‑specific PTS enzymes: IIB component/IIC component | |||||
CAGACCGTACATTTTGAACAGGAAGCCACCAGACAGTTTACCCGCAGTCGGGTCACCCGCCATATAACGCGGAATGTCGCCGTGGAAAACCTGACCTGCTGCGTTGGTGTATTCACCAATCTGCATCTGGAAAGGTA‑CGTTCCAGATG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/1158651‑1158504‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CACCAATCTGCATCTGGAAAGGTACGTTCCAGATGTGGTGCAGACCAAACGGTACCAGGCAACGTTCGATGAAACCGTAAATGCCAAACGCAACTACCGGGTTCTGGTAAGCAGCCCACTGAGAGAAGGTCTGGATTGCAGAA < NC_000913/1158538‑1158396 |||||||||||||| CAGACCGTACATTTGGAACAGGACGTCACCAGACAGTTTACCCGGAGTCGGGTCACCCGCCATATAACGAGGAATGTCGCCGTAGAATACCTGACCTGCTGCGTTGGTGTATTCACCAATCTGCAGCTGGAAAGGTA‑CGTTCCAGATGC < 2:683487/149‑1 ACCGTACATTTTGAACAGGAAGCCACCAGACAGGTTACCCGCAGTCGGGTCACCCGCCATATAACGCGGAATGTCGCCGTGGAAAACCTGACCTGCTGCGTTGGTGTATTCACCAATCTGCATCTGGAAAGGTA‑CGTTCCAGATGCAGA < 1:274026/149‑1 ACATTTTGAACAGGAAGCCACCAGACAGTTTACCCGCAGTCGGGTCACCCGCTATATAACGCGGAATGTCTCCGTGGAAAACCTGACCTGCTGCGTTGGTGTATTCACCAATCTGCATCTGGAAAGGTA‑CGTTCCAGATGCAGATTGGT < 1:795015/149‑1 ACATTTTGAACAGGAAGCCACCAGACAGTTTACCCGCAGTCGGGTCACCCGCCATATAACGCGGAATGTCGCCGTGGAAAACCTGACCTGCTGCGTTGGTGTATTCACCAATCTGCATCTGGAAAGGTA‑CGTTCCAGATGCAGATTGGT < 1:10456/149‑1 ACATTTTGAACAGGAAGCCACCAGACAGTTTACCCGCAGTCGGGTCACCCGCCAACAGGCCCGTGAGGTCGCCGTGGAAAACCTGACCTGCTGCGTTGGTGTATTCACCAATCTGCATCTGGAAAGGTA‑CGTTCCAGATGCAGATTGGT < 1:635285/149‑1 ACATTTTGAACAGGAAGCCACCAGACAGTATACCCGCAGTCGGGTCACCCGCCATATAACGCGGAATGTCGCCGTGGAAAACCTGACCTGCTGCGTTGGTGTATTCACCAATCTGCATCTGGAAAGGTA‑CGTTCCAGATGCAGATTGGT < 1:741163/149‑1 ACAGTTTCAACAGGAAGCCACCAGACAGTTTACCCGCAGTCGGGTCACCCGCCATATAACGCGGAATGTCGCCGTGGAAAACCTGACCTGCTGCGTTGGTGTATTCACCAATCTGCATCTGGAAAGGTA‑CGTTCCAGATGCAGATTGGT < 1:277141/149‑1 gtcgtAACAGGAAGCCACCAGACAGTTTACCCGCAGTCGGGTCACCCGCCATATAACGCGGAATGTCGCCGTGGAAAACCTGACCTGCTGCGTTGGTGTATTCACCAATCTGCATCTGG‑AACGTACCTTTCCAGATGCAGATTGGTGAA < 2:841852/144‑1 TTTTGAACAGGAAGCCACCAGACAGTTTACCCGCAGTCGGGTCACCCGCCATATAACGCGGAATGTCGCCGTGGAAAACCTGACCTGCTGCGTTGGTGTATTCACCAATCTGCATCTGGAAAGGTA‑CGTTCCAGATGCAGATTGGTGAA > 2:559556/1‑149 TTTGAACAGGAAGCCACCAGACAGTTTACCCGCAGTCGGGTCACCCGCCATATAACGCGGAATGTCGCCGTGGAAAACCTGACCTGCTGTGTTGGTGTATTCACCAATCTGCATCTGGAAAGGTA‑GGTTCCAGATGCAGATTGGTGAAT < 2:318444/149‑1 TTGAACAGGAAGCCACCAGACAGTTTACCCGCAGTCGGGTCACCCGCCATATAACGCGGAATGTCGCCGTGGAAAACCTGACCTGCTGCGTTGGTGTATTCACCAATCTGCATCTGGAAAGGTA‑CGTTCCAGATGCAGATTGGTGAATA < 2:704001/149‑1 GAACAGGAAGCCACCAGACAGTTTACCCGCAGTCGGGTCACCCGCCATATAACGCGGAATGTCGCCGTGGAAAACCTGACCTGCTGCGTTGGTGTATTCACCAATCTGCATCTGGAAAGATA‑CGTTCCAGATGCAGATTGGTGAATACA < 1:643630/149‑1 GGAAGCCACCAGACAGTTTACCCGCAGTCGGGTCACCCGCCATATAACGCGGAATGTCGCCGTGGAAAACCTGACCTGCTGCGTTGGTGTATTCACCAATCTGCATCTGGAAAGGTA‑CGTTCCAGATGCAGATTGGTGAATACACCAAT < 1:580837/149‑1 AAGCCACCAGGCAGTTTACCCGCAGTCGGGTCACCCGCCATATAACGCGGAATGTCGCCGTGGTAAACCTGACCTGCTGCGTTGGTGTATTCACCAATCTGCATCTGGAAAGGTA‑CGTTCCAGATGCAGATTGGTGAATACACCAATCT < 1:768686/149‑1 AGTTTACCCGCAGTCGGGTCACCCGCCATATAACGCGGAATGTCGCCGTGGAAAACCTGACCTGCTGCGTTGGTGTATTCACCAATCTGCATCTGGAAAGGTA‑CGTTCCAGATGCAGATTGGTGAATACACCAATCTGCATCTGGAAAG < 1:793352/149‑1 GCAGTCGGGTCACCCGCCATATAACGCGGAATGTCGCCGTGGAAAACCTGACCTGCTGCGTTGGTGTATTCACCAATCTGCATCTGGAAAGGTA‑CGTTCCAGATGCAGATTGGTGAATACACCAATCTGCATCTGGAAAGGTACGTTCC < 1:559556/149‑1 caggtGGGACACCCCGCATATAACGCGGAAGTTCGCCGTAGAAAACCTGACCTGCTGCGTTGGTGTATTCACCAATGTGCATCTGGAAAGGTA‑CGTTGCAGATGCAGATTGGTGAATACACCAATCTGCATCTGGAAAGGTACGTTCCA < 2:201275/144‑1 AGTCGGGGCACCCGCCAAATAACGTGGAATGGCGCCGTGGAAAACCTGACCTGCTGCGTTGGTGTATTCACCAATCTGCATCTGGAAAGGTA‑CGTTCCAGATGCAGATTGGTGAATACACCAATCTGCATCTGGAAAGGTACGTTCCAG < 1:673547/149‑1 TCGGGTCACCCGCCATATAACGCGGAATGTCGCCGTGGAAAACCTGACCTGCTGCGTTGGTGTATTCACCAATCTGCATCTGGAAAGGTA‑CGTTCCAGATGCAGATTGGTGAATACAC > 1:228132/1‑118 TCGGGTCACCCGCCATATAACGCGGAATGTCGCCGTGGAAAACCTGACCTGCTGCGTTGGTGTATTCACCAATCTGCATCTGGAAAGGTA‑CGTTCCAGATGCAGATTGGTGAAGACAC < 2:228132/118‑1 TATAACGCGGAATGTCGCCGTGGAAAACCTGACCTGCTGCGTTGGTGTATTCACCAATCTGCATCTGGAAAGGTA‑CGTTCCAGATGCAGATTGGTGAATACACCAATCTGCATCTGGAAAGGTACGTTCCAGATGTGGTGCAGACCAAA < 1:473725/149‑1 CGCGGAATGTCGCCGTGGAAAACCTGAGCTGCTGCGGTGGTGTATTCAGCAATCTGCATCTGGAAAGGTA‑CGTTCCAGATGCAGAGTGGTGAATACACCAATCTGCATCTGGAAAGGTACGTTCCAGATGTGGTGCAGACCAAACGGTA < 2:633684/149‑1 GCCGTGGAAAACCTGACCTGCTGCGTTGGTGTATTCACCAATCTGCATCTGGAAAGGTA‑CGTTCCAGATGCAGATTGGTGAATACACCAATCTGCATCTGGAAAGGTACGTTCCAGATGTGGTGCAGACCAAACGGTACCAGGCAACGT < 1:326707/149‑1 ccgggtAAAACCTGAGCTGCTGCGTTGGTGTATTCACCAATCTGCATCTGGAAAGGTA‑CGTTCCAGATGCAGATTGGTGAATACACCAATCTGCATCTGGAAAGGTACGTTCCAGATGTGGTGCAGACCAAACGGTACCAGGCAACGTT < 2:425823/143‑1 caGAAAACCGGACCTGCTGCGTTGGTGTATTCACCAATCTGCATCTGGAAAGGTA‑CGTTCCAGATGCAGATTGGTGAATACACCAATCTGCATCTGGAAAGGTACGTTCCAGATGTGGTGCAGACCAAACGGTACCAGGCAACGTTCGA < 1:318849/147‑1 ATGCAGATTGGTGAATACACCAATCTGCATCTGGAAAGGTACGTTCCAGATGTGGTGCAGACCAAACGGTACCAGGCAACGTTCGATGAAACCGTAAATGCCAAACGCAACTACCGGGTTCTGGTAAGCAGCCCACTGAGAGAAGGTCT < 1:404103/149‑1 GTGAATACACCAATCTGCATCTGGAAAGGTACGTTCCAGATGTGGTGCAGACCAAACGGTACCAGGCAACGTTCGATGAAACAGTAAGTATTTATCTGTACTACCGGGTTCTGGTAAGCAGCCCACTGAGAGAAGGGCTGGATTGCAGA > 1:420910/1‑149 TGAATACACCAATCTGCATCTGGAAAGGTACGTTCCAGATGTGGTGCAGACCAAACGGTACCAGGCAACGTTCGATGAAACCGTAAATGCCAAACGCAACTACCGGGTTCTGGTAAGCAGCCCACTGAGAGAAGGTCTGGATTGCAGAA < 1:340556/149‑1 TACACCAATCTGCATCTGGAAAGGTACGTTCCAGATGTGGTGCAGACC > 1:696958/1‑48 TACACCAATCTGCATCTGGAAAGGTACGTTCCAGATGTGGTGCAGACC < 2:696958/48‑1 |||||||||||||| CAGACCGTACATTTTGAACAGGAAGCCACCAGACAGTTTACCCGCAGTCGGGTCACCCGCCATATAACGCGGAATGTCGCCGTGGAAAACCTGACCTGCTGCGTTGGTGTATTCACCAATCTGCATCTGGAAAGGTA‑CGTTCCAGATG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/1158651‑1158504‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CACCAATCTGCATCTGGAAAGGTACGTTCCAGATGTGGTGCAGACCAAACGGTACCAGGCAACGTTCGATGAAACCGTAAATGCCAAACGCAACTACCGGGTTCTGGTAAGCAGCCCACTGAGAGAAGGTCTGGATTGCAGAA < NC_000913/1158538‑1158396 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |