New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913_3_pae_tpiA = 2726042141 (1.040)20 (0.160) 18/234 12.2 13.3% intergenic (‑296/+27) kgtP/rrfG alpha‑ketoglutarate transporter/5S ribosomal RNA of rrnG operon
?NC_000913_3_pae_tpiA 4040827 = NA (NA)intergenic (+191/+79) rrfA/mobB 5S ribosomal RNA of rrnA operon/molybdopterin‑guanine dinucleotide biosynthesis protein B
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 147 total aligned reads displayed.

AGGATAAATTTCTGGTAAGGAGGACACGTATGGAAGTGGGCAAGTTGGGGAAGCCGTATCCGTTGCTGAATCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCA‑GGATGGCCTTTCGCATAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAA  >  NC_000913_3_pae_tpiA/2725896‑2726190
                                                                                                                                                  |                                                                                                                                                     
aGGATAAATTTCTGGTAAGGAGGACACGTATGGAAGTGGGCAAGTTGGGGAAGCCGTATCCGTTGCTGAATCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTc                                                                                                                                                    <  2:384094/150‑1 (MQ=255)
aGGATAAATTTCTGGTAAGGAGGACACGTATGGAAGTGGGCAAGTTGGGGAAGCCGTATCCGTTGCTGAATCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTc                                                                                                                                                    <  1:298903/150‑1 (MQ=255)
 ggATAAATTTCTGGTAAGGAGGACACGTATGGAAGTGGGCAAGTTGGGGAAGCCGTATCCGTTGCTGAATCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCa                                                                                                                                                   >  4:480741/1‑150 (MQ=255)
  gATAAATTTCTGGTAAGGAGGACACGTATGGTAGTGGGCAAGTTGGGGAAGCCGTATCCGTTGCTGAATCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCCATGCAAAACGGCCATCCGTCA‑g                                                                                                                                                 >  2:841432/1‑150 (MQ=255)
   aTAAATTTCTGGTAAGGAGGACACGTATGGAAGTGGGCAAGTTGGGGAAGCCGTATCCGTTGCTGAATCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCA‑gg                                                                                                                                                >  4:93953/1‑150 (MQ=255)
   aTAAATTTCTGGTAAGGAGGACACGTATGGAAGTGGGCAAGTTGGGGAAGCCGTATCCGTTGCTGAATCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCA‑gg                                                                                                                                                >  1:373887/1‑150 (MQ=255)
   aTAAATTTCTGGTAAGGAGGACACGTATGGAAGTGGGCAAGTTGGGGAAGCCGTATCCGTTGCTGAATCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCA‑gg                                                                                                                                                >  1:220965/1‑150 (MQ=255)
    tAAATTTCTGGTAAGGAGGACACGTATGGAAGTGGGCAAGTTGGGGAAGCCGTATCCGTTGCTGAATCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCA‑GGa                                                                                                                                               <  2:1389844/150‑1 (MQ=255)
    tAAATTTCTGGTAAGGAGGACACGTATGGAAGTGGGCAAGTTGGGGAAGCCGTATCCGTTGCTGAATCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCA‑GGa                                                                                                                                               <  3:529303/150‑1 (MQ=255)
      aaTTTCTGGTAAGGAGGACACGTATGGAAGTGGGCAAGTTGGGGAAGACGTATCCGTTGCTGAATCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCA‑GGATg                                                                                                                                             >  4:801885/1‑150 (MQ=255)
       aTTTCTGGTAAGGAGGACACGTATGGAAGTGGGCAAGTTGGGGAAGCCGTATCCGTTGCTGAATCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCA‑GGATgg                                                                                                                                            <  3:480741/150‑1 (MQ=255)
       aTTTCTGGTAAGGAGGACACGTATGGAAGTGGGCAAGTTGGGGAAGCCGTATCCGTTGCTGAATCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCA‑GGATgg                                                                                                                                            >  2:1311493/1‑150 (MQ=255)
        tttCTGGTAAGGAGGACACGTATGGAAGTGGGCAAGTTGGGGAAGCCGTATCCGTTGCTGAATCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCA‑GGATGGc                                                                                                                                           >  1:689806/1‑150 (MQ=255)
           cTGGTAAGGAGGACACGTATGGAAGTGGGCAAGTTGGGGAAGCCGTATCCGTTGCTGAATCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCA‑GGATGGCCtt                                                                                                                                        >  2:611980/1‑150 (MQ=255)
              gTAAGGAGGACACGTATGGAAGTGGGCAAGTTGGGGAAGCCGTATCCGTTGCTGAATCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCA‑GGATGGCCTTTCg                                                                                                                                     >  2:1201051/1‑150 (MQ=255)
                   gaggaCACGTATGGAAGTGGGCAAGTTGGGGAAGCCGTATCCGTTGCTGAATCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCC‑TGACGGATGGCCttttt                                                                                                                                     <  2:1289970/145‑3 (MQ=38)
                    aggaCACGTATGGAAGTGGGCAAGTTGGGGAAGCCGTATCCGTTGCTGAATCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCA‑GGATGGCCTTTCGCATAAt                                                                                                                               <  1:1017080/150‑1 (MQ=255)
                            tATGGAAGTGGGCAAGTTGGGGAAGCCGTATCCGTTGCTGAATCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCAAATGCAAAAAGGCCATCCGTCA‑GGATGGCCTTTCGCATAATTTGATGcc                                                                                                                       <  1:1470375/150‑1 (MQ=255)
                             aTGGAAGTGGGCAAGTTGGGGAAGCCGTATCCGTTGCTGAATCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGTCATCCGTCA‑GGATGGCCTTTc                                                                                                                                      <  2:574809/134‑1 (MQ=255)
                             aTGGAAGTGGGCAAGTTGGGGAAGCCGTATCCGTTGCTGAATCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGTCATCCGTCA‑GGATGGCCTTTc                                                                                                                                      >  1:574809/1‑134 (MQ=255)
                             aTGGAAGTGGGCAAGTTGGGGAAGCCGTATCCGTTGCTGAATCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCA‑GGATGGCCTTTCGCATAATTTGATGCCt                                                                                                                      <  2:41211/150‑1 (MQ=255)
                              tGGAAGTGGGCAAGTTGGGGAAGCCGTATCCGTTGTTGAATCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCA‑GGATGGCCTTTCGCATAATTTGATGCCTg                                                                                                                     >  4:421267/1‑150 (MQ=255)
                               ggAAGTGGGCAAGTTGGGGAAGCCGTATCCGTTGCTGAATCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCA‑GGATGGCCTTTCGCATAATTTGATGCCTgg                                                                                                                    <  1:1355445/150‑1 (MQ=255)
                               ggAAGTGGGCAAGTTGGGGAAGCCGTATCCGTTGCTGAATCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCA‑GGATGGCCTTTCGCATAATTTGATGCCTgg                                                                                                                    <  1:1355518/150‑1 (MQ=255)
                                 aaGTGGGCAAGTTGGGGAAGCCGTATCCGTTGCTGAATCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCA‑GGATGGCCTTTCGCATAATTTGATGc                                                                                                                        <  2:1221159/144‑1 (MQ=255)
                                 aaGTGGGCAAGTTGGGGAAGCCGTATCCGTTGCTGAATCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCA‑GGATGGCCTTTCGCATAATTTGATGc                                                                                                                        >  1:1221159/1‑144 (MQ=255)
                                   gTGGGCAAGTTGGGGAAGCCGTATCCGTTGCTGAATCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGt                                                                                                                                                     <  3:74791/114‑1 (MQ=255)
                                   gTGGGCAAGTTGGGGAAGCCGTATCCGTTGCTGAATCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGt                                                                                                                                                     >  4:74791/1‑114 (MQ=255)
                                   gTGGGCAAGTTGGGGAAGCCGTATCCGTTGCTGAATCTGGCATATGTGGGAGGATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCA‑GGATGGCCTTTCGCATAATTTGATGCCTGGCAGt                                                                                                                >  4:860112/1‑150 (MQ=255)
                                    tGGGCAAGTTGGGGAAGCCGTATCCGTTGTTGAATCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCA‑GGATGGCCTTTCGCATAATTTGATGCCTGGCAGtt                                                                                                               <  3:421267/150‑1 (MQ=255)
                                     gggCAAGTTGGGGAAGCCGTATCCGTTGCTGAATCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCA‑GGATGGCCTTTCGCATAATTTGATGCCTGGCAGTTc                                                                                                              >  3:558738/1‑150 (MQ=255)
                                      ggCAAGTTGGGGAAGCCGTATCCGTTGCTGAATCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCA‑GGATGGCCTTTCGCATAATTTGATGCCTGGCAGTTcc                                                                                                             >  3:253265/1‑150 (MQ=255)
                                       gCAAGTTGGGGAAGCCGTATCCGTTGCTGAATCTGGCATATGTGGGAGTATAAGAGGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCA‑GGATGGCCTTTCGCATAATTTGATGCCTGGCAGTTccc                                                                                                            >  3:828388/1‑150 (MQ=255)
                                           gTTGGGGAAGCCGTATCCGTTGCTGAATCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCA‑GGATGGCCTTTCGCATAATTTGATGCCTGGCAGTTCCCTAct                                                                                                        >  3:762841/1‑150 (MQ=255)
                                           gTTGGGGAAGCCGTATCCGTTGCTGAATCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCA‑GGATGGCCTTTCGCATAATTTGATGCCTGGCAGTTCCCTAct                                                                                                        <  4:426222/150‑1 (MQ=255)
                                              gtggAAGCCGTATCCGTTGCTGAATCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCA‑GGATGGCCTTTCGCATAATTTGATGCCTGGCAGTTCCCTACtctc                                                                                                     >  4:2123/3‑150 (MQ=255)
                                                   aGCCGTATCCGTTGTTGAATCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCA‑GGATGGCCTTTCGCATAATTTGATGCCTGGCAGTTCCCTACTCTCGCATg                                                                                                <  4:415773/150‑1 (MQ=255)
                                                    gCCGTATCCGTTGCTGAATCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCC‑TGACGGATGGCCttt                                                                                                                                       >  1:1281072/1‑110 (MQ=25)
                                                     ccGTATCCGTTGCTGAATCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCA‑GGATGGCCTTTCGCATAATTTGATGCCt                                                                                                                      >  1:1028052/1‑126 (MQ=255)
                                                     ccGTATCCGTTGCTGAATCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCA‑GGATGGCCTTTCGCATAATTTGATGCCt                                                                                                                      <  2:1028052/126‑1 (MQ=255)
                                                     ccGTATCCGTTGCTGAATCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCA‑GGATGGCCTTTCGCATAATTTGATGCCTGGCAGTTCCCTACTCTCGCATggg                                                                                              <  1:1198699/150‑1 (MQ=255)
                                                       gTATCCGTTGCTGAATCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCA‑GGATGGCCTTTCGCATAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGga                                                                                            <  1:157789/150‑1 (MQ=255)
                                                            cGTTGCTGAATCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCA‑GGATGGCCTTTCGCATAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGAccc                                                                                       <  2:373887/150‑1 (MQ=255)
                                                            cGTTGCTGAATCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCA‑GGATGGCCTTTCGCATAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGAccc                                                                                       <  2:1266522/150‑1 (MQ=255)
                                                               tGCTGAATCTGGCATATGCGGGCGTATAATTCGCGTACTTGCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCA‑GGATGGCCTTTCGCATAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCcac                                                                                    <  1:319973/150‑1 (MQ=21)
                                                                 cTGAATCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCA‑GGATGGCCTTTCGCATAATTTGATGCCTgg                                                                                                                    >  1:874103/1‑116 (MQ=255)
                                                                 cTGAATCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCA‑GGATGGCCTTTCGCATAATTTGATGCCTgg                                                                                                                    <  2:874103/116‑1 (MQ=255)
                                                                    aaTCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCA‑GGATGGCCTTTCGCATAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTAc                                                                               <  1:246899/150‑1 (MQ=255)
                                                                    aaTCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCA‑GGATGGCCTTTCGCATAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTAc                                                                               <  3:93953/150‑1 (MQ=255)
                                                                        tGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGGCAATGCAAAAAGGCCATCCGTCA‑GGATGGCCTTTCGCATAATTTGATGCCTGGCAGTTCCCTACTCTCGCACGGGGAGACCCCACACTACCATc                                                                           >  3:844848/1‑150 (MQ=255)
                                                                         ggCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCA‑GGATGGCCTTTCGCATAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCg                                                                          >  3:439309/1‑150 (MQ=255)
                                                                          gCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCTGAC‑GGATGGCCttttt                                                                                                                                     >  3:990378/1‑88 (MQ=18)
                                                                          gCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCA‑GGATGGCCTTTCGCATAATTTGATGCCTGGCAGtt                                                                                                               >  1:132467/1‑112 (MQ=255)
                                                                          gCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGGCC‑GGATTGCCTTTCGCAAAAGTTCATCCCTGGCCGTTCCCCACTCTAGCATGGGGAGGCCCCACACTACAATCgg                                                                         >  2:516784/1‑150 (MQ=25)
                                                                            atatGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCA‑GGATGGCCTTTCGCATAATTTGAt                                                                                                                          >  4:294872/1‑99 (MQ=255)
                                                                            atatGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCA‑GGATGGCCTTTCGCATAATTTGAt                                                                                                                          <  3:294872/99‑1 (MQ=255)
                                                                             tatGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCA‑GGATGGCCTTTCGCATAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGgcgc                                                                      >  3:366434/1‑150 (MQ=255)
                                                                             tatGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCA‑GGATGGCCTTTCGCATAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGgcgc                                                                      <  4:520069/150‑1 (MQ=255)
                                                                                gtgGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCA‑GGATGGCCtt                                                                                                                                        >  1:539850/1‑81 (MQ=255)
                                                                                gtgGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCA‑GGATGGCCTTTCGCATAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTAc                                                                   >  4:300212/1‑150 (MQ=255)
                                                                                     aGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCA‑GGATGGCCTTTCGCATAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGt                                                              <  2:220965/150‑1 (MQ=255)
                                                                                       tctgaGACGCGCATCGTCGGATCCGGCATTTATTTCTGCGCACATGCAAAAAGGCCCTCCGTCA‑GGATGGCCTTTCGCATAATTTTTTGAATGGCAGTTTCGTCCTCTCGCATGGGGAGGCCACCCGCTTCCATCGGCGCTACGAGGttt                                                            <  4:163538/146‑1 (MQ=12)
                                                                                       tataAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCA‑GGATGGCCTTTCGCATAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGttt                                                            <  1:999397/150‑1 (MQ=255)
                                                                                       tataAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCA‑GGATGGCCTTTCGCATAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGttt                                                            <  3:2123/150‑1 (MQ=255)
                                                                                         taAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCA‑GGATGGCCTTTCGCATAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCa                                                          >  3:163538/1‑150 (MQ=255)
                                                                                         taAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCA‑GGATGGCCTTTCGCATAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCa                                                          <  1:750344/150‑1 (MQ=255)
                                                                                          aaGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCTCCAATGCAAAAAGGCCATCCGTCA‑GGATGGCCTTTCGCATAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCAc                                                         >  2:1359173/1‑150 (MQ=255)
                                                                                          aaGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCA‑GGATGGCCTTTCGCATAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCAc                                                         <  1:1311493/150‑1 (MQ=255)
                                                                                            gACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCA‑GGATGGCCTTTCGCATAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCcaca                                                                                   <  4:902617/122‑1 (MQ=255)
                                                                                            gACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCA‑GGATGGCCTTTCGCATAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCcaca                                                                                   >  3:902617/1‑122 (MQ=255)
                                                                                             aCGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCA‑GGATGGCCTTTCGCATAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGgc                                                                        >  2:360483/1‑132 (MQ=255)
                                                                                             aCGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCA‑GGATGGCCTTTCGCATAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGgc                                                                        <  1:360483/132‑1 (MQ=255)
                                                                                               gcgcAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCA‑GGAGGGCCTTTCGCATAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTg                                                    >  2:1632850/1‑150 (MQ=255)
                                                                                                 gcAGCGTCGCATCAGGCATTTTTTTTTTTTCTTATGCAAAAAGGCCATCCGTCA‑GGATGGCCTTTCGCATAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAg                                                  >  2:277993/1‑150 (MQ=21)
                                                                                                 gcAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCA‑GGATGGCCTTTCGc                                                                                                                                    <  2:974870/68‑1 (MQ=255)
                                                                                                   aGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCA‑GGATGGCCTTTCGCATAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGtt                                                <  4:100009/150‑1 (MQ=255)
                                                                                                    gCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCA‑GGATGGCCTTTCGCATAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTc                                               <  2:689806/150‑1 (MQ=255)
                                                                                                           aTCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCA‑GGATGGCCTTTCGCATAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATgg                                        >  2:498111/1‑150 (MQ=255)
                                                                                                                gCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCA‑GGATGGCCTTTCGCATAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACtt                                                       >  3:654575/1‑130 (MQ=255)
                                                                                                                gCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCA‑GGATGGCCTTTCGCATAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGACTTCGGCATGGGGTCa                                   >  3:166183/1‑150 (MQ=255)
                                                                                                                 cacttttttCTGCGCCAATGCAACAAGGCCATCCGTCA‑GGATGGCCTTTCGCAAAATTTAAAGACTGGCAGTTCCCTCATCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAg                                  <  1:155680/147‑1 (MQ=18)
                                                                                                                   tttttttCTGCGCCAATGCAAAAAGGCCATCCGTCA‑GGATGGCCTTTCGCATAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGt                                <  3:283280/150‑1 (MQ=255)
                                                                                                                   tttttttCTGCGCCAATGCAAAAAGGCCATCCGTCA‑GGATGGCCTTTCGCATAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGt                                <  4:280483/150‑1 (MQ=255)
                                                                                                                   ttttttgCTGCGCCAATGCAAAAAGGCCATCCGTCA‑GGATGGCCTTTCGCATAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGt                                <  1:872428/150‑1 (MQ=255)
                                                                                                                            gcgcCAATGCAAAAAGGCCATCCGTCA‑GGATGGCCTTTCGCATAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTAACATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGAATGGGGACAGGTGGGaccacc                       >  2:1242195/1‑150 (MQ=255)
                                                                                                                             cgcCAATGCAAAAAGGCCATCCGTCA‑GGATGGCCTTTCGCATAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATgg                                        <  4:947968/132‑1 (MQ=255)
                                                                                                                                      aaaaaGGCCATCCGTCA‑GGATGGCCTTTCGCATAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGgc             >  4:788126/1‑150 (MQ=255)
                                                                                                                                       gaaaGGCCATCC‑TGACGGATGGCCTTTTGCATAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACcg                      >  2:290390/2‑140 (MQ=14)
                                                                                                                                       aaaaGGCCATCCGTCA‑GGATGGCCTTTCGCATAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGa                                                   <  1:1494211/111‑1 (MQ=255)
                                                                                                                                          aGGCCATCCGTCA‑GGATGGCCTTTCGCATAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGgccgcc         <  2:916961/150‑1 (MQ=255)
                                                                                                                                            gCCATCCGTCA‑GGATGGCCTTTTGCATAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGttt                                                            <  1:893862/97‑1 (MQ=255)
                                                                                                                                            gCCATCCGTCA‑GGATGGCCTTTTGCATAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGttt                                                            >  2:893862/1‑97 (MQ=255)
                                                                                                                                             ccATCCGTCA‑GGATGGCCTTTCGCATAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACtt                                                       <  3:682146/101‑1 (MQ=255)
                                                                                                                                             ccATCCGTCA‑GGATGGCCTTTCGCATAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACtt                                                       >  4:682146/1‑101 (MQ=255)
                                                                                                                                             ccATCCGTCA‑GGATGGCCTTTCGCATAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAgg      <  3:362635/150‑1 (MQ=255)
                                                                                                                                              cATCCGTCA‑GGATGGCCTTTCGCATAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCa                                           >  1:334053/1‑112 (MQ=255)
                                                                                                                                              cATCCGTCA‑GGATGGCCTTTCGCATAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGc     >  2:1278505/1‑150 (MQ=255)
                                                                                                                                               aTCCGTCA‑GGATGGCCTTTCGCATAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCa    <  4:558738/150‑1 (MQ=255)
                                                                                                                                                 ccGTCA‑GGATGGCCTTTCGCATAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGAcccc                                                                                      >  1:846775/1‑66 (MQ=255)
                                                                                                                                                 ccGTCA‑GGATGGCCTTTCGCATAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGAcccc                                                                                      <  2:846775/66‑1 (MQ=255)
                                                                                                                                                  |                                                                                                                                                     
AGGATAAATTTCTGGTAAGGAGGACACGTATGGAAGTGGGCAAGTTGGGGAAGCCGTATCCGTTGCTGAATCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCA‑GGATGGCCTTTCGCATAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAA  >  NC_000913_3_pae_tpiA/2725896‑2726190

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.