| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913_3_pae_tpiA | 1429011 = | 126 (1.270) | 15 (0.160) | 12/254 | 10.1 | 11.3% | intergenic (+27/‑38) | lomR/stfR | pseudogene, Rac prophage lom homolog;Phage or Prophage Related; interrupted by IS5 and N‑ter deletion/Rac prophage; putative tail fiber protein |
| ? | NC_000913_3_pae_tpiA | 1429033 = | 118 (1.270) | intergenic (+49/‑16) | lomR/stfR | pseudogene, Rac prophage lom homolog;Phage or Prophage Related; interrupted by IS5 and N‑ter deletion/Rac prophage; putative tail fiber protein | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
Only 100 of 128 total aligned reads displayed.
TGGGGAGCTGGCGTGCAGTTTAACCCGACCGAATCCGTGGCCATTGATATTGCTTATGAAGGCCCCGGCAGTGGCGACTGGCGCACTGACGGTTTCATCGTGGGTGTCGGTTATAAGTTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGC‑GGGCTTTTTTGTGGGGTGAATATGGCAGTAAAGATTTCAGGTGTACTGAAAGACGGCACAGGAAAACCGGTACAGAACTGCACAATCCAGCTGAAAGCAAAACGTAACAGCACCACGGTGGTGGTGAACACGC > NC_000913_3_pae_tpiA/1428862‑1429160 | tGGGGAGCTGGCGTGCAGTTTAACCCGACCGAATCCGTGGCCATTGATATTGCTTATGAAGGCCCCGGCAGTGGCGACTGGCGCACTGACGGTTTCATCGTGGGTGTCGGTTATAAGTTCTGATTAGCCAGGTAACACAGTGTTATGACa > 1:804646/1‑150 (MQ=255) ggggAGCTGGCGTGCAGTTTAACCCGACCGAATCCGTGGCCATTGATATTGCTTATGAAGGCCCCGGCAGTGGCGACTGGCGCACTGACGGTTTCATCGTGGGTGTCGGTTATAAGTTCTGATTAGCCAGGTAACACAGTGTTATGACAg > 1:996433/1‑150 (MQ=255) gggAGCTGGCGTGCAGTTTAACCCGACCGAATCCGTGGCCATTGATATTGCTTATGAAGGCCCCGGCAGTGGCGACTGGCGCACTGACGGTTTCATCGTGGGTGTCGGTTATAAGTTCTGATTAGCCAGGTAACACAGTGTTATGACAGc > 2:834865/1‑150 (MQ=255) gAGCTGGCGTGCAGTTTAACCCGACCGAATCCGTGGCCATTGATATTGCTTATGAAGGCCCCGGCAGTGGCGACTGGCGCACTGACGGTTTCATCGTGGGTGTCGGTTATAAGTTCTGATTAGCCAGGTAACACAGTGTTATGACAGccc < 2:470213/150‑1 (MQ=255) gCTGGCGTGCAGTTTAACCCGACCGAATCCGTGGCCATTGATATTGCTTATGAAGGCCCCGGCAGTGGCGACTGGCGCACTGACGGTTTCATCGTGGGTGTCGGTTATAAGTTCTGATTAGCCAGGTAACACAGTGTTATGACAGCccgc < 2:1029519/150‑1 (MQ=255) tGGCGTGCAGTTTAACCCGACCGAATCCGTGGCCATTGATATTGCTTATGAAGGCCCCGGCAGTGGCGACTGGCGCACTGACGGTTTCATCGTGGGTGTCGGTTATAAGTTCTGATTAGCCAGGTAACACAGTGTTATGACa < 2:372008/142‑1 (MQ=255) tGGCGTGCAGTTTAACCCGACCGAATCCGTGGCCATTGATATTGCTTATGAAGGCCCCGGCAGTGGCGACTGGCGCACTGACGGTTTCATCGTGGGTGTCGGTTATAAGTTCTGATTAGCCAGGTAACACAGTGTTATGACa > 1:372008/1‑142 (MQ=255) tGGCGTGCAGTTTAACCCGACCGAATCCGTGGCCATTGATATTGCTTATGAAGGCCCCGGCAGTGGCGACTGGCGCACTGACGGTTTCATCGTGGGTGTCGGTTATAAGTTCTGATTAGCCAGGTAACACAGTGTTATGACAGCccgccg < 4:77829/150‑1 (MQ=255) tGGCGTGCAGTTTAACCCGACCGAATCCGTGGCCATTGATATTGCTTATGAAGGCCCCGGCAGTGGCGACTGGCGCACTGACGGTTTCATCGTGGGTGTCGGTTATAAGTTCTGATTAGCCAGGTAACACAGTGTTATGACAGCccgccg > 4:148939/1‑150 (MQ=255) gTGCAGTTTAACCCGACCGAATCCGTGGCCATTGATATTGCTTATGAAGGCCCCGGCAGTGGCGACTGGCGCACTGACGGTTTCATCGTGGGTGTCGGTTATAAGTTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTc < 4:606861/150‑1 (MQ=255) gCAGTTTAACCCGACCGAATCCGTGGCCATTGATATTGCTTATGAAGGCCCCGGCAGTGGCGACTGGCGCACTGACGGTTTCATCGTGGGTGTCGGTTATAAGTTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAg < 4:535856/150‑1 (MQ=255) aGTTTAACCCGACCGAATCCGTGGCCATTGATATTGCTTATGAAGGCCCCGGCAGTGGCGACTGGCGCACTGACGGTTTCATCGTGGGTGTCGGTTATAAGTTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGc < 3:148939/150‑1 (MQ=255) aGTTTAACCCGACCGAATCCGTGGCCATTGATATTGCTTATGAAGGCCCCGGCAGTGGCGACTGGCGCACTGACGGTTTCATCGTGGGTGTCGGTTATAAGTTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGc < 2:1049935/150‑1 (MQ=255) gTTTAACCCGACCGAATCCGTGGCCATTGATATTGCTTATGAAGGCCCCGGCAGTGGCGACTGGCGCACTGACGGTTTCATCGTGGGTGTCGGTTATAAGTTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGC‑g < 3:171495/150‑1 (MQ=255) gTTTAACCCGACCGAATCCGTGGCCATTGATATTGCTTATGAAGGCCCCGGCAGTGGCGACTGGCGCACTGACGGTTTCATCGTGGGTGTCGGTTATAAGTTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGC‑g < 2:505342/150‑1 (MQ=255) aCCCGACCGAATCCGTGGCCATTGATATTGCTTATGAAGGCCCCGGCAGTGGCGACTGGCGCACTGACGGTTTCATCGTGGGTGTCGGTTATAAGTTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGC‑GGGCtt > 1:1010970/1‑150 (MQ=255) ccgaccgaATCCGTGGCCATTGATATTGCTTATGAAGGCCCCGGCAGTGGCGACTGGCGCACTGACGGTTTCATCGTGGGTGTCGGTTATAAGTTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGC‑GGGCtttt < 1:1042805/150‑1 (MQ=255) cgaccgaATCCGTGGCCATTGATATTGCTTATGAAGGCCCCGGCAGTGGCGACTGGCGCACTGACGGTTTCATCGTGGGTGTCGGTTATAAGTTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGC‑GGGCttttt > 2:527334/1‑150 (MQ=255) accgaATCCGTGGCCATTGATATTGCTTATGAAGGCCCCGGCAGTGGCGACTGGCGCACTGACGGTTTCATCGTGGGTGTCGGTTATAAGTTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGC‑GGGCTTTTTtg > 3:266682/1‑150 (MQ=255) cgaATCCGTGGCCATTGATATTGCTTATGAAGGCCCCGGCAGTGGCGACTGGCGCACTGACGGTTTCATCGTGGGTGTCGGTTATAAGTTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGC‑GGGCTTTTTtgtg > 1:251/1‑150 (MQ=255) cgaATCCGTGGCCATTGATATTGCTTATGAAGGCCCCGGCAGTGGCGACTGGCGCACTGACGGTTTCATCGTGGGTGTCGGTTATAAGTTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGC‑GGGCTTTTTtgtg < 4:32017/150‑1 (MQ=255) tCCGTGGCCATTGATATTGCTTATGAAGGCCCCGGCAGTGGCGACTGGCGCACTGACGGTTTCATCGTGGGTGTCGGTTATAAGTTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGC‑GGGCTTTTTTGTGGGGt > 3:350669/1‑150 (MQ=255) ttGATATTGCTTATGAAGGCCCCGGCAGTGGCGACTGGCGCACTGACGGTTTCATCGTGGGTGTCGGTTATAAGTTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGC‑GGGCTTTTTTGTGGGGTGAATATGGCa < 1:528471/150‑1 (MQ=255) ttGATATTGCTTATGAAGGCCCCGGCAGTGGCGACTGGCGCACTGACGGTTTCATCGTGGGTGTCGGTTATAAGTTCTGATTAGCCAGGTAACACAGTGTCATGACAGCCCGCCGGTTCAGGC‑GGGCTTTTTTGTGGGGTGAATATGGCa < 4:24467/150‑1 (MQ=255) atTGCTTATGAAGGCCCCGGCAGTGGCGACTGGCGCACTGACGGTTTCATCGTGGGTGTCGGTTATAAGTTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGC‑GGGCTTTTTTGTGGGGTGAatat < 3:618628/141‑1 (MQ=255) atTGCTTATGAAGGCCCCGGCAGTGGCGACTGGCGCACTGACGGTTTCATCGTGGGTGTCGGTTATAAGTTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGC‑GGGCTTTTTTGTGGGGTGAatat > 4:618628/1‑141 (MQ=255) atTGCTTATGAAGGCCCCGGCAGTGGCGACTGGCGCACTGACGGTTTCATCGTGGGTGTCGGTTATAAGTTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGC‑GGGCTTTTTTGTGGGGTGAATATGGCAGTaaa < 4:691728/150‑1 (MQ=255) ttATGAAGGCCCCGGCAGTGGCGACTGGCGCACTGACGGTTTCATCGTGGGTGTCGGTTATAAGTTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGC‑GGGCTTTTTTGTGGGGTGAATATGGCAGTAAAGAttt > 2:1080688/1‑150 (MQ=255) aaGGCCCCGGCAGTGGCGACTGGCGCACTGACGGTTTCATCGTGGGTGTCGGTTATAAGTTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGC‑GGGCTTTTTtgt > 3:382513/1‑120 (MQ=255) aaGGCCCCGGCAGTGGCGACTGGCGCACTGACGGTTTCATCGTGGGTGTCGGTTATAAGTTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGC‑GGGCTTTTTtgt < 4:382513/120‑1 (MQ=255) ggCCCCGGCAGTGGCGACTGGCGCACTGACGGTTTCATCGTGGGTGTCGGTTATAAGTTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGC‑GGGCTTTTTTGTGGGGTGAATATGGCAGTAAAGATTTCAGgtgt > 1:916353/1‑150 (MQ=255) gCCCCGGCAGTGGCGACTGGCGCACTGACGGTTTCATCGTGGGTGTCGGTTATAAGTTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCAGGTTCAGGC‑GGGCTTTTTTGTGGGGTGAATATGGCAGTAAAGATTTCAGGTGTa > 1:844541/1‑150 (MQ=255) ccGGCAGTGGCGACTGGCGCACTGACGGTTTCATCGTGGGTGTCGGTTATAAGTTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGC‑GGGCTTTTTTGTGGGGTGAATATGGCAGTAAAGATTTc > 1:234758/1‑140 (MQ=255) ccGGCAGTGGCGACTGGCGCACTGACGGTTTCATCGTGGGTGTCGGTTATAAGTTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGC‑GGGCTTTTTTGTGGGGTGAATATGGCAGTAAAGATTTc < 2:234758/140‑1 (MQ=255) cGGCAGTGGCGACTGGCGCACTGACGGTTTCATCGTGGGTGTCGGTTATAAGTTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGC‑GGGCTTTTTTGTggg > 1:1026531/1‑116 (MQ=255) gCAGTGGCGACTGGCGCACTGACGGTTTCATCGTGGGTGTCGGTTATAAGTTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCTGGTTCAGGC‑GGGCTTTTTTGTGGGGTGAATATGGCAGTAAAGATTTCAGGTGTACTGaaa > 1:782083/1‑150 (MQ=255) ggCGACTGGCGCACTGACGGGTGCATCGTGGGTGTCGGTTATAAGTTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGC‑GGGCTTGTTTGTGGGGTGAATATGGCAGTAAAGATTTCAGGTGTACTGAAAGTCgg > 2:369673/1‑150 (MQ=255) gCGACTGGCGCACTGACGGTTTCATCGTGGGTGTCGGTTATAAGTTCTGATTAGCCAGGTAACACAGGGTTATGACAGCCCGCCGGTTCAGGC‑GGGCTTTTTTGGGGGGGGAATATGGCAGAAAAGATTTCAGGTGACCTGAAAGACGGc > 1:773189/1‑150 (MQ=255) cGACTTTCGCACTGACGGTTTCATCGTGGGTGTCGGTTATAAGTTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGC‑GGGCTTTTTTGTGGGGTGAATATGGCAGTAAAGATTTCAGGTGTACTGAAAGACGGca < 2:217510/150‑1 (MQ=255) gACTGGCGCACTGACGGTTTCATCGTGGGTGTCGGTTATAAGTTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGC‑GGGCTTTTTTGTGGGGTGAATATGGCAGTAAAGATTTCAGGTGTACTGAAAGACGGcac > 2:126813/1‑150 (MQ=255) gACTGGCGCACTGACGGTTTCATCGTGGGTGTCGGTTATAAGTTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGC‑GGGCTTTGTTGTGGGGTGAATATGGCAGTAAAGATTTCAGGTGTACTGAAAGACGGcaa > 1:460985/1‑149 (MQ=255) aCTGGCGCACTGACGGTTTCATCGTGGGTGTCGGTTATAAGTTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGC‑GGGCTTTTTTGTGGGGTGAATATGGCAGTAAAGATTTCAGGTGTACTGAAAGACGGca > 1:952867/1‑148 (MQ=255) tGGCGCACTGACGGTTTCATCGTGGGTGTCGGTTATAAGTTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGC‑GGGCTTTTTTGTGGGGTGAATATGGCAGTAAAGAt < 1:1090497/123‑1 (MQ=255) tGGCGCACTGACGGTTTCATCGTGGGTGTCGGTTATAAGTTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGC‑GGGCTTTTTTGTGGGGTGAATATGGCAGTAAAGATTTCAGGTGTACTGAAAGACGGCACAgg < 1:527334/150‑1 (MQ=255) gtcgccACTGCCGGTTTCATCGTGGGTGTCGGTTATAAGTTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGC‑GGGCTTTTTTGTGGGGTGAATATGGCAGTAAAGATTTCAGGTGTACTGAAAGACGGCACAgg < 4:668899/145‑1 (MQ=255) gcgcACTGACGGTTTCATCGTGGGTGTCGGTTATAAGTTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAgg > 1:849274/1‑85 (MQ=255) gcgcACTGACGGTTTCATCGTGGGTGTCGGTTATAAGTTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAgg < 2:849274/85‑1 (MQ=255) cgcACTGACGGTTTCATCGTGGGTGTCGGTTATAAGTTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGC‑GGGCTTTTTTGTGGGGTGAATATGGCAGTAAAGATTTCAGGTGTACTGAAAGACGGCACAGGaaa > 2:111983/1‑150 (MQ=255) cgcACTGACGGTTTCATCGTGGGTGTCGGTTATAAGTTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGC‑GGGCTTTTTTGTGGGGTGAATATGGCAGTAAAGATTTCAGGTGTACTGAAAGACGGCACAGGaaa < 3:494794/150‑1 (MQ=255) gACGGTTTCATCGTGGGTGTCGGTTATAAGTTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGC‑GGGCTTTTTTGTGGGGTGAATATGGCAGTAAAGATTTCAGGTGTACTGAAAGACGGCACAGGAAAACCGGt > 1:551673/1‑150 (MQ=255) ggTTTCATCGTGGGTGTCGGTTATAAGTTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGC‑GGGCTTTTTTGTGGGGTGAATATGGCAGTaaa > 1:453731/1‑108 (MQ=255) ttCATCGTGGGTGTCGGTTATAAGTTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGC‑GGGCTTTTTTGTGGGGTGAATATGGCAGTAAAGATTTCAGGTGTACTGAAAGACGGCACAGGAAAACCGGTACAGaa < 3:572085/150‑1 (MQ=255) tCATCGTGGGTGTCGGTTATAAGTTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGC‑GGGCTTTTTTGTGGGGTGAATATGGCAGTAAAGATTTCAGGTGTACTGAAAGACGGCACAGGAAAACCGGTACAGAAc < 2:299059/150‑1 (MQ=255) cATCGTGGGTGTCGGTTATAAGTTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGC‑GGGCTTTTTTGTGGGGTGAATATGGCAGTAAAGATTTCAGGTGTACTGAAAGACGGCACAGGAATACCGGTACAGAACt > 2:599742/1‑150 (MQ=255) cATCGTGGGTGTCGGTTATAAGTTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGC‑GGGCTTTTTTGTGGGGTGAATATGGCAGTAAAGATTTCAGGTGTACTGAAAGACGGCACAGGAAAACCGGTACAGAACt < 2:996433/150‑1 (MQ=255) aTCGTGGGTGTCGGTTATAAGTTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGC‑GGGCTTTTTTGTGGGGTGAATATGACAGTAAAGATTTCAGGTGTACTGAAAGACGGCACAGGAAAACCGGTACAGAACTg < 1:874198/150‑1 (MQ=255) tCGTGGGTGTCGGTTATAAGTTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGC‑GGGCTTTTTTGTgg > 3:401317/1‑83 (MQ=255) tCGTGGGTGTCGGTTATAAGTTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGC‑GGGCTTTTTTGTgg < 4:401317/83‑1 (MQ=255) cGTGGGTGTCGGTTATAAGTTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGC‑GGGCTTTTTTGTGGGGTGAATATGGCAGTAAAGATTTCAGGTGTACTGAAAGACGGCACAGGAAAACCGGTACAGAACTGca > 3:468999/1‑150 (MQ=255) cGTGGGTGTCGGTTATAAGTTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGC‑GGGCTTTTTTGTGGGGTGAATATGGCAGTAAAGATTTCAGGTGTACTGAAAGACGGCACAGGAAAACCGGTACAGAACTGca > 3:98092/1‑150 (MQ=255) gTGGGTGTCGGTTATAAGTTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGC‑GGGCTTTTTTGTGGGGTGAATATGGCAGTAAAGATTTCAGGTGTACTGaaa > 2:936523/1‑118 (MQ=255) tGGGTGTCGGTTATAAGTTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGC‑GGGCTTTTTTGTGGGGTGAATATGGCAGTAAAGATTTCAGGTGTACTGAAAGACGGCACAGGAAAACCGGTACAGAACTGcaca > 4:625472/1‑150 (MQ=255) gtgtCGGTTATAAGTTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGC‑GGGCTTTTTTGTGGGGTGAATATGGCAGTAAAGATTTCAGGTGTACTTAAAGACGGCACAGTAAAACCGGTACAGAACTGCACAATc < 4:172012/150‑1 (MQ=255) tgtCGGTTATAAGTTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGC‑GGGCTTTTTTGTGGGGTGAATATGGCAGTAAAGATTTCCGGTGTACTGAAAGACGGCACAGGAAAACCGCTAGAGCACTGCACAATcc > 4:8202/1‑150 (MQ=255) tgtCGGTTATAAGTTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGC‑GGGCTTTTTTGTGGGGTGAATATGGCAGTAAAGATTTCAGGTGTACTGAAAGACGGCACAGGAAAACCGGTACAGAACTGCACAATcc < 4:266682/150‑1 (MQ=255) tgtCGGTTATAAGTTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGC‑GGGCTTTTTTGTGGGGTGAATATGGCAGTAAAGATTTCAGGTGTACTGAAAGACGGCACAGGAAAACCGGTACAGAACTGCACAATcc < 2:127845/150‑1 (MQ=255) tCGGTTATAAGTTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGC‑GGGCTTTTTTGTGGGGTGAATATGGCAGTAAAGATTTCAGGTGTACTGAAAGACGGCACAGGAAAACCGGTACAGAACTGCACAATCCAg < 3:403573/150‑1 (MQ=255) gTTATAAGTTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGC‑GGGCTTTTTTGTGGGGTGAATATGGCAGTAAAGATTTCAGGTGTACTGAAAGACGGCACAGGAAAACCGGTACAGAACTGCACAATCCAGCTg > 3:274626/1‑150 (MQ=255) ataAGTTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGC‑GGGCTTTTTTGTGGGGTGAATATGGCAGTAAAGATTTCAGGTGTACTGAAAGACGGCACAGGAAAACCGGTACAGAACTGCACAATCCAGCTGaaa < 2:1035402/150‑1 (MQ=255) taAGTTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGC‑GGGCTTTTTTGTGGGGTGAATATGGCAGTAAAGATTTCAGGTGTACTGAAAGACGGCACAGGAAAACCGGTACAGAACTGCACAATCCAGCTGAAAg < 1:1080688/150‑1 (MQ=255) aaGTTCTGGTTAGCCAGGTAACACAGGGATATGACAGCCCGCCGGTTCAGGC‑GGGCTTCATGGTGGGGGGAGTAAGACAGGAAAGATTTCAGGCGTACTGACAGACGGAACAGGCAAACCGGCACAGAACGGCACAACCCAGCGGAAGGc > 2:1017406/1‑150 (MQ=255) gTTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGC‑GGGCTTTTTTGTGGGGTGAATATGGCAGTAAAGATTTCAGGTGTACTGAAAGACGGCACAGGAAAACCGGTACAGAACTGCACAATCCAGCTGAAAGCaa < 1:902384/150‑1 (MQ=255) ttCTGATTAGCCAGGTAATACAGTGTTATGACAGCCCGCCGGTTCAGCC‑GGGCTTTTTTGTGTGGTGAATATGGCAGTAAAGCTTTCAGGTGTACTGAAAGACGGCACAGGAAAACCGGTACAGAACTGCACAATCCAGCTGAAAGCaaa > 2:694151/1‑150 (MQ=255) ttCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGC‑GGGCTTTTATGTGGGGTTAATATGGCAGTAAAGATTTCAGGTGTACTGAAAGACGGCACAGGAAAACCGGTACAGAACTGCACAATCCAACTGAAAGaaaa < 2:488795/150‑1 (MQ=255) tCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGC‑GGGCTTTTTTGTGGGGTGAATATGGCAGTAAAGATTTCAGGTGTACTGAAAGACGGCACAGGAAAACCGGTACAGAACTGCACAATCCAGCTGAAAGCaaaa > 1:865670/1‑150 (MQ=255) cTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGC‑GGGCTTTTTTGTGGGGTGAATATGGCAGTAAAGATTTCAGGTGTACTGAAAGACGGCACAGGAAAACCGGTACAGAACTGCACAATCCAGCTGAAAGCAAAAc < 1:663324/150‑1 (MQ=255) tGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGC‑GGGCTTTTTTGTGGGGTGAATATGGCAGTAAAGATTTCAGGTGTACTGAAAGACGGCACAGGAAAAc < 2:451578/113‑1 (MQ=255) tGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGC‑GGGCTTTTTTGTGGGGTGAATATGGCAGTAAAGATTTCAGGTGTACTGAAAGACGGCACAGGAAAAc > 1:451578/1‑113 (MQ=255) atcaGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGC‑GGGCTTTTTTGTGGGGTGAATATGGCAGTAAAGATTTCAGGTGTACTGAAAGACGGcaca > 1:931224/4‑104 (MQ=255) atcaGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGC‑GGGCTTTTTTGTGGGGTGAATATGGCAGTAAAGATTTCAGGTGTACTGAAAGACGGcaca < 2:931224/101‑1 (MQ=255) aTTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGC‑GGGCTTTTTTGTGGGGTGAATATGGCAGTAAAGATTTCAg < 1:661362/84‑1 (MQ=255) aTTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGC‑GGGCTTTTTTGTGGGGTGAATATGGCAGTAAAGATTTCAg > 2:661362/1‑84 (MQ=255) ccAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGC‑GGGCTTTTTTGTGGGGTGAATATGGCAGTAAAGATTTCAGGTGTACTGAAAGACGGCACAGGAAAACCGGTACAGAACTGCACAATCCAGCTGAAAGCAAAACGTAACAGc < 1:912322/150‑1 (MQ=255) cggTAAAACAGTGTTCAGACAGCCCGCCAGATCAGGCGGGGGAAGAGGGTGGGGT‑AATAAGGGAGTAAAGATTTCAGGGGAACTGACAGACGGCGCCGGAAAACTGGTACAGAACTGCACAATCCAGCTGAAAGCAAAACGTAACAGcac > 2:471678/2‑150 (MQ=255) aGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGC‑GGGCTTTTTTGTGGGGTGAATATGGCAGTAAAGATTTCAGGTGTa < 4:109709/82‑1 (MQ=255) aGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGC‑GGGCTTTTTTGTGGGGTGAATATGGCAGTAAAGATTTCAGGTGTa > 3:109709/1‑82 (MQ=255) aGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGC‑GGGCTTTTTTGTGGGGTGAATATGGCAGTAAAGATTTCAGGTGTACTGAAAGACGGCACAGGAAAACCGGTACAGAACTGCACAATCCAGCTGAAAGCAAAACGTAACAGcac > 2:252255/1‑150 (MQ=255) cacaGTGTTATGACAGCCCGCCGGTTCAGGC‑GGGCTTTTTTGTGGGGTGAATATGGCAGTAAAGATTTCAGGTGTACTGAAAGACGGCACAGGAAAACCGGTACAGAACTGCACAATCCAGCTGAAAGCAAAACGTAACAGCACCACggt < 3:58037/150‑1 (MQ=255) acaGTGTTATGACAGCCCGCCGGTTCAGGC‑GGGCTTTTTTGTGGGGTGAATATGGCAGTAAAGATTTCAGGTGTACTGAAAGACGGCACAGGAAAACCGGTACAGAACTGCACAATCCAGCTGAAAGCAAAACGTAACAGCACCACggtg > 2:596587/1‑150 (MQ=255) gtgtTATGACAGCCCGCCGGTTCAGGC‑GGGCTTTTTTGTGGGGTGAATATGGCAGTAAAGATTTCAGGTGTACTGAAAGACGGCACAGGAAAACCGGTACAGAACTGCACAATCCAGCTGAAAGCAAAACGTAACAGCACCACggtggtg < 2:888701/150‑1 (MQ=255) gtgtTATGACAGCCCGCCGGTTCAGGC‑GGGCTTTTTTGTGGGGTGAATATGGCAGTAAAGATTTCAGGTGTACTGAAAGACGGCACAGGAAAACCGGTACAGAACTGCACAATCCAGCTGAAAGCAAAACGTAACAGCACCACggtggtg < 1:1017406/150‑1 (MQ=255) gtgtTATGACAGCCCGCCGGTTCAGGC‑GGGCTTTTTTGTGGGGTGAATATGGCAGTAAAGATTTCAGGTGTACTGAAAGACGGCACAGGAAAACCGGTACAGAACTGCACAATCCAGCTGAAAGCAAAACGTAACAGCACCACggtggtg < 2:551673/150‑1 (MQ=255) ttATGACAGCCCGCCGGTTCAGGC‑GGGCTTTTTTGTGGGGTGAATATGGCAGTAAAGATTTCAGGTGTACTGAAAGACGGCACAGGAAAACCGGTACAGAACTGCACAATCCAGCTGAAAGCAAAACGTAACAGCACCACGgtggtggtg > 1:1101656/1‑150 (MQ=255) ttATGACAGCCCGCCGGTTCAGGC‑GGGCTTTTTTGTGGGGTGAATATGGCAGTAAAGATTTCAGGTGTACTGAAAGACGGCACAGGAAAACCGGTACAGAACTGCACAATCCAGCTGAAAGCAAAACGTAACAGCACCACGgtggtggtg > 1:1101644/1‑150 (MQ=255) aTGACAGCCCGCCGGTTCAGGC‑GGGCTTTTTTGTGGGGTGAata > 1:653724/1‑44 (MQ=255) aTGACAGCCCGCCGGTTCAGGC‑GGGCTTTTTTGTGGGGTGAata < 2:653724/44‑1 (MQ=255) aTGACAGCCCGCCGGTTCAGGC‑GGGCTTTTTTGTGGGGTGAATATGGCAGTAAAGATTTCAGGTGTACTGAAAGACGGCACAGGAAAACCGGTACAGAACTGCACAATCCAGCTGAAAGCAAAACGTAACAGCACCACGGTGGTGGTGaa < 2:916353/150‑1 (MQ=255) aaaaaGCCCGCCTGAACCGAC‑GGGCTTTTTTGTGGGGTGAATATGGCAGTAAAGATTTCAGGTGTACTGAAAGACGGCACAGGAAAAcc < 1:475172/85‑1 (MQ=255) cAGCCCGCCGGTTCAGGC‑GGGCTTTTTTGTGGGGTGAATATGGCAGTAAAGATTTCAGGTGTACTGAAAGACGGCACAGGAAAACCGGTACAGAACTGCACAATCCAGCTGAAAGCaaag > 1:722613/1‑119 (MQ=255) aGCCCGCCGGTTCAGGC‑GGGCTTTTTTGTGGGGTGAATATGGCAGTAAAGATTTCAGGTGTACTGAAAGACGGCACAGGAAAACCGGTACAGAACTGCACAATCCAGCTGAAAGCAAAACGTAACAGCACCACGGTGGTGGTGAACACGc < 2:804646/150‑1 (MQ=255) | TGGGGAGCTGGCGTGCAGTTTAACCCGACCGAATCCGTGGCCATTGATATTGCTTATGAAGGCCCCGGCAGTGGCGACTGGCGCACTGACGGTTTCATCGTGGGTGTCGGTTATAAGTTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGC‑GGGCTTTTTTGTGGGGTGAATATGGCAGTAAAGATTTCAGGTGTACTGAAAGACGGCACAGGAAAACCGGTACAGAACTGCACAATCCAGCTGAAAGCAAAACGTAACAGCACCACGGTGGTGGTGAACACGC > NC_000913_3_pae_tpiA/1428862‑1429160 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |