New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913_3_pae_tpiA	= 3437907	75 (0.900)	12 (0.160)	12/236	7.8	15.2%	intergenic (+13/‑117)	trkA/mscL	NAD‑binding component of TrK potassium transporter/mechanosensitive channel protein, high conductance
	?	NC_000913_3_pae_tpiA	= 3437911	66 (0.880)					intergenic (+17/‑113)	trkA/mscL	NAD‑binding component of TrK potassium transporter/mechanosensitive channel protein, high conductance
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

TGGAAACGACGTGATGATTGCCAATGACAATCTGCGCATTGAGCAAGGCGATCACGTAATTATGTTCCTCACAGATAAAAAGTTTATTACCGACGTCGAAAGACTCTTCCAGCCAAGCCCTTTCTTCTTGTAATTAATAAGGCGTCTAAT‑GACGCCTTATTATTTCCCTTTGATTATCAAGGATTAATTAAATTCATTCCTGGCAGGAAAATGGCTTAACATTTGTTAGACTTATGGTTGTCGGCTTCATAGGGAGAATAACATGAGCATTATTAAAGAATTTCGCGAATTTGCGATGC  >  NC_000913_3_pae_tpiA/3437762‑3438060                                                                                                                                                      |                                                                                                                                                       tGGAAACGACGTGATGATTGCCAATGACAATCTGCGCATTGAGCAAGGCGATCACGTAATTATGTTCCTCACAGATAAAAAGTTTATTACCGACGTCGAAAGACTCTTCCAGCCAAGCCCTTTCTTCTTGTAATTAATAAGGCGTCTAAt                                                                                                                                                        >  3:549660/1‑150 (MQ=255)    aaaCGACGTGATGATTGCCAATGACAATCTGCGCATTGAGCAAGGCGATCACGTAATTATGTTCCTCACAGATAAAAAGTTTATTACCGACGTCGAAAGACTCTTCCAGCCAAGCCCTTTCTTCTTGTAATTAATAAGGCGTCTAAT‑GAc                                                                                                                                                    <  1:127997/150‑1 (MQ=255)    aaaCGACGTGATGATTGCCAATGACAATCTGCGCATTGAGCAAGGCGATCACGTAATTATGTTCCTCACAGATAAAAAGTTTATTACCGACGTCGAAAGACTCTTCCAGCCAAGCCCTTTCTTCTTGTAATTAATAAGGCGTCTAAT‑GAc                                                                                                                                                    <  1:89332/150‑1 (MQ=255)    aaaCGACGTGATGATTGCCAATGACAATCTGCGCATTGAGCAAGGCGATCACGTAATTATGTTCCTCACAGATAAAAAGTTTATTACCGACGTCGAAAGACTCTTCCAGCCAAGCCCTTTCTTCTTGTAATTAATAAGGCGTCTAAT‑GAc                                                                                                                                                    >  1:273231/1‑150 (MQ=255)     aaCGACGTGATGATTGCCAATGACAATCTGCGCATTGAGCAAGGCGATCACGTAATTATGTTCCTCACAGATAAAAAGTTTATTACCGACGTCGAAAGACTCTTCCAGCCAAGCCCTTTCTTCTTGTAATTAATAAGGCGTCTAAT‑GACg                                                                                                                                                   >  3:438043/1‑150 (MQ=255)      acgactTGATGATTGCCAATGACAATCTGCGCATTGAGCAAGGCGATCACGTAATTATGTTCCTCACAGATAAAAAGTTTATTACCGACGTCGAAAGACTCTTCCAGCCAAGCCCTTTCTTCTTGTAATTAATAAGGCGTCTAAT‑GACGc                                                                                                                                                  <  2:679141/150‑1 (MQ=255)         acgTGATGATTGCCAATGACAATCTGCGCATTGAGCAAGGCGATCACGTAATTATGTTCCTCACAGATAAAAAGTTTATTACCGACGTCGAAAGACTCTTCCAGCCAAGCCCCTTCTTCTTGTAATTAATAAGGCGTCTAAT‑GACGCCtt                                                                                                                                               <  2:628574/150‑1 (MQ=255)            tgatgaTTGCCAATGACAATCTGCGCATTGAGCAAGGCGATCACGTAATTATGTTCCTCACAGATAAAAAGTTTATTACCGACGTCGAAAGACTCTTCCAGCCAAGCCCTTTCTTCTTGTAATTAATAAGGCGTCTAAT‑GACGCCttatt                                                                                                                                            <  1:661926/150‑1 (MQ=255)             gatgatTGCCAATGACAATCTGCGCATTGAGCAAGGCGATCACGTAATTATGTTCCTCACAGATAAAAAGTTTATTACCGACGTCGAAAGACTCTTCCAGCCAAGCCCTTTCTTCTTGTAATTAATAAGGCGTC‑ATTAGACGCCttatta                                                                                                                                           <  1:279524/150‑1 (MQ=255)                gatTGCCAATGACAATCTGCGCATTGAGCAAGGCGATCACGTAATTATGTTCCTCACAGATAAAAAGTTTATTACCGACGTCGAAAGACTCTTCCAGCCAAGCCCTTTCTTCTTGTAATTAATAAGGCGTCTAAT‑GACGCCTTATTAttt                                                                                                                                        >  1:654448/1‑150 (MQ=255)                  ttGCCAATGACAATCTGCGCATTGAGCAAGGCGATCACGTAATTATGTTCCTCACAGATAAAAAGTTTATTACCGACGTCGAAAGACTCTTCCAGCCAAGCCCTTTCTTCTTGTAATTAATAAGGCGTCTAAT‑GACGCCTTATTATTTcc                                                                                                                                      <  2:273231/150‑1 (MQ=255)                   tGCCAATGACAATCTGCGCATTGAGCAAGGCGATCACGTAATTATGTTCCTCACAGATAAAAAGTTTATTACCGACGTCGAAAGACTCTTCCAGCCAAGCCCTTTCTTCTTGTAATTAATAAGGCGTCTAAT‑GACGCCTTATTATTTccc                                                                                                                                     >  2:147312/1‑150 (MQ=255)                      cAATGACAATCTGCGCATTGAGCAAGGCGATCACGTAATTATGTTCCTCACAGATAAAAAGTTTATTACCGACGTCGAAAGACTCTTCCAGCCAAGCCCTTTCTTCTTGTAATTAATAAGGCGTCTAAT‑GACGCCTTATTATTTCCCttt                                                                                                                                  >  2:446023/1‑150 (MQ=255)                       aaTGACAATCTGCGCATTGAGCAAGGCGATCACGTAATTATGTTCCTCACAGATAAAAAGTTTATTACCGACGTCGAAAGACTCTTCCAGCCAAGCCCTTTCTTCTTGTAATTAATAAGGCGTCTAAT‑GACGCCTTATTATTTCCCTTTg                                                                                                                                 <  3:582210/150‑1 (MQ=255)                             aaTCTGCGCATTGAGCAAGGCGATCACGTAATTATGTTCCTCACAGATAAAAAGTTTATTACCGACGTCGAAAGACTCTTCCAGCCAAGCCCTTTCTTCTTGTAATTAATAAGGCGTCTAAT‑GACGCCTTATTATTTCCCTTTGATTATc                                                                                                                           <  2:81725/150‑1 (MQ=255)                              aTCTGCGCATTGAGCAAGGCGATCACGTAATTATGTTCCTCACAGATAAAAAGTTTATTACCGACGTCGAAAGACTCTTCCAGCCAAGCCCTTTCTTCTTGTAATTAATAAGGCGTCTAAT‑GACGCCTTATTATTTCCCTTTGATTATCa                                                                                                                          >  1:369914/1‑150 (MQ=255)                               tCTGCGCATTGAGCAAGGCGATCACGTAATTATGTTCCTCACAGATAAAAAGTTTATTACCGACGTCGAAAGACTCTTCCAGCCAAGCCCTTTCTTCTTGTAATTAATAAGGCGTCTAAT‑GACGCCTTATTATTTCCCTTTGATTATCaa                                                                                                                         <  1:253022/150‑1 (MQ=255)                                  gggcAATGAGGAAGGGGAATAAGTAATTAAGTTCCTCACAGATAAAAAGTTTATTACCCACCTTCAAAGACTCTTCCCGCCAAGCCCTTTCTTCTTTTAATTAATAAGGCGTCTAAT‑GACGCCTTATTATTTCCCTTTGATTATCAAGGa                                                                                                                      <  2:233809/148‑1 (MQ=255)                                   cgcATTGAGCAAGGCGATCACGTAATTATGTTCCTCACAGATAAAAAGTTTATTACCGACGTCGAAAGACTCTTCCAGCCAAGCCCTTTCTTCTTGTAATTAATAAGGCGTCTAAT‑GACGCCTTATTATTTCCCTTTGATTATCAAGGat                                                                                                                     <  2:654448/150‑1 (MQ=255)                                      aTTGAGCAAGGCGATCACGTAATTATGTTCCTCACAGATAAAAAGTTTATTACCGACGTCGAAAGACTCTTCCAGCCAAGCCCTTTCTTCTTGTAATTAATAAGGCGTCATTA‑GACGCCtt                                                                                                                                               >  1:173690/1‑121 (MQ=255)                                          aGCAAGGCGATCACGTAATTATGTTCCTCACAGATAAAAAGTTTATTACCGACGTCGAAAGACTCTTCCAGCCAAGCCCTTTCTTCTTGTAATTAATAAGGCGTCTAAT‑GACGCCTTATTATTTCCCTTTGATTATCAAGGAttaattaa                                                                                                              <  1:502787/150‑1 (MQ=255)                                                gCGATCACGTAATTATGTTCCTCACAGATAAAAAGTTTATTACCGACGTCGAAAGACTCTTCCAGCCAAGCCCTTTCTTCTTGTAATTAATAAGGCGTCTAAT‑GACGCCTTATTATTTCCCTTTGATTATCAAGGATTAATTAAattcat                                                                                                        <  3:489501/150‑1 (MQ=255)                                                     cACGTAATTATGTTCCTCACAGATAAAAAGTTTATTACCGACGTCGAAAGACTCTTCCAGCCAAGCCCTTTCTTCTTGTAATTAATAAGGCGTCTAAT‑GACGCCTTATTATTTCCCTTTGATTATCAAGGATTAATTAAATTCATTCCTg                                                                                                   <  4:512467/150‑1 (MQ=255)                                                          aaTTATGTTCCTCACAGATAAAAAGTTTATTACCGACGTCGAAAGACTCTTCCAGCCAAGCCCTTTCTTCTTGTAATTAATAAGGCGTCTAAT‑GACGCCTTATTATTTCCCTTTGATTATCAAGGATTAATTAAATTCATTCCTGGCAgg                                                                                              >  1:177345/1‑150 (MQ=255)                                                              aTGTTCCTCACAGATAAAAAGTTTATTACCGACGTCGAAAGACTCTTCCAGCCAAGCCCTTTCTTCTTGTAATTAATAAGGCGTCTAAT‑GACGCCTTATTATTTCCCTTTGATTATCAAGGATTAATTAAATTCATTCCTGGCAGGaaaa                                                                                          >  1:867433/1‑150 (MQ=255)                                                               tGTTCCTCACAGATAAAAAGTTTATTACCGACGTCGAAAGACTCTTCCAGCCAAGCCCTTTCTTCTTGTAATTAATAAGGCGTCTAAT‑GACGCCTTATTATTTCCCTTTGATTATCAAGGATTAATTAAATTCATTCCTGGCAGGAAAAt                                                                                         <  4:525640/150‑1 (MQ=255)                                                                gTTCCTCACAGATATAAAGTTTCTGACCGACCGCCAAAGACTCGTCCAGCCAAGCCCTTTCTTCTTGTAATTAATAAGGCGTCTAAT‑GACGCCTTATTATTTCCCTTTGATTATCAAGGATTAATTAAATTCATTCCTGGCAGGAAAATg                                                                                        <  3:115530/150‑1 (MQ=255)                                                                 ttCCTCACAGATAAAAAGTTTATTACCGACGTCGAAAGACTCTTCCAGCCAAGCCCTTTCTTCTTGTAATTAATAAGGCGTCTAAT‑GACGCCTTATTATTTCCCTTTGATTATCAAGGATTAATTAAATTCATTCCTGGCAGGAAAATgg                                                                                       >  3:442309/1‑150 (MQ=255)                                                                  tCCTCACAGATAAAAAGTTTATTACCGACGTCGAAAGACTCTTCCAGCCAAGCCCTTTCTTCTTGTAATTAATAAGGCGTCTAAT‑GACGCCTTATTATTTCCCTTTGATTATCAAGGATTAATTAAATTCATTCCTGGCAGGAAAATGGc                                                                                      <  2:369914/150‑1 (MQ=255)                                                                      cacaGATAAAAAGTTTATTACCGACGTCGAAAGACTCTTCCAGCCAAGCCCTTTCTTCTTGTAATTAATAAGGCGTCTAAT‑GACGCCTTATTATTTCCCTTTGATTATCAAGGATTAATTAAATTCATTCCTGGCAGGAAAATGGCTTaa                                                                                  <  4:285900/150‑1 (MQ=255)                                                                         aGATAAAAAGTTTATTACCGACGTCGAAAGACTCTTCCAGCCAAGCCCTTTCTTCTTGTAATTAATAAGGCGTCTAAT‑GACGCCTTATTATTTCCCTTTGATTATCAAGGATTAATTAAATTCATTCCTGGCAGGAAAATGGCTTAACAt                                                                               >  1:842622/1‑150 (MQ=255)                                                                             aaaaaGGTTATTACCGACGTCGAAAGACTCTTCCAGCCAAGCCCTTTCTTCTTGTAATTAATAAGGCGTCTAAT‑GACGCCTTATTATTTCCCTTTGATTATCAAGGATTAATTAAATTCATTCCTGGCAGGAAAATGGCTTAACATTTGt                                                                           >  2:717159/1‑150 (MQ=255)                                                                               aaaGTTTATTACCGACGTCGAAAGACTCTTCCAGCCAAGCCCTTTCTTCTTGTAATTAATAAGGCGTCTAAT‑GACGCCTTATTATTTCCCTTTGATTATCAAGGATTAATTAAATTCATTCCTGGCAGGAAAATGGCTTAACATTTGTTa                                                                         >  3:539241/1‑150 (MQ=255)                                                                                aaGTTTATTACCGACGTCGAAAGACTCTTCCAGCCAAGCCCTTTCTTCTTGTAATTAATAAGGCGTCTAAT‑GACGCCTTATTATTTCCCTTTGATTATCAAGGATTAATTAAattcattc                                                                                                      <  3:271886/120‑1 (MQ=255)                                                                                aaGTTTATTACCGACGTCGAAAGACTCTTCCAGCCAAGCCCTTTCTTCTTGTAATTAATAAGGCGTCTAAT‑GACGCCTTATTATTTCCCTTTGATTATCAAGGATTAATTAAattcattc                                                                                                      >  4:271886/1‑120 (MQ=255)                                                                                 aGTTTATTACCGACGTCGAAAGACTCTTCCAGCCAAGCCCTTTCTTCTTGTAATTAATAAGGCGTCTAAT‑GACGCCTTATTATTTCCCTTTGATTATCAAGGATTAATTAAATTCATTCCTGGCAGGAAAATGGCTTAACATTTGTTAGa                                                                       <  4:549660/150‑1 (MQ=255)                                                                                     tattaCCGACGTCGAAAGACTCTTCCAGCCAAGCCCTTTCTTCTTGTAATTAATAAGGCGTCTAAT‑GACGCCTTATTATTTCCCTTTGATTATCAAGGATTAATTAAATTCATTCCTGGCAGGAAAATGGCTTAACATTTGTTAGACTTa                                                                   <  1:277586/150‑1 (MQ=255)                                                                                       ttaCCGACGTCGAAAGACTCTTCCAGCCAAGCCCTTTCTTCTTGTAATTAATAAGGCGTCTAAT‑GACGCCTTATTATTTCCCTTTGa                                                                                                                                >  1:175132/1‑87 (MQ=255)                                                                                       ttaCCGACGTCGAAAGACTCTTCCAGCCAAGCCCTTTCTTCTTGTAATTAATAAGGCGTCTAAT‑GACGCCTTATTATTTCCCTTTGa                                                                                                                                <  2:175132/87‑1 (MQ=255)                                                                                        taCCGACGTCGAAAGACTCTTCCAGCCAAGCCCTTTCTTCTTGTAATTAATAAGGCGTCTAAT‑GACGCCTTATTATTTCCCTTTGATTATCAAGGATTAATTAAATTCATTCCTGGCAGGAAAATGGCTTAACATTTGTTAGACTTATgg                                                                <  1:446023/150‑1 (MQ=255)                                                                                          ccGACGTCGAAAGACTCTTCCAGCCAAGCCCTTTCTTCTTGTAATTAATAAGGCGTCTAAT‑GACGCCTTATTATTTCCCTTTGATTATCAAGGATTAATTAAATTCATTCCTGGc                                                                                                 <  1:89148/115‑1 (MQ=255)                                                                                          ccGACGTCGAAAGACTCTTCCAGCCAAGCCCTTTCTTCTTGTAATTAATAAGGCGTCTAAT‑GACGCCTTATTATTTCCCTTTGATTATCAAGGATTAATTAAATTCATTCCTGGc                                                                                                 >  2:89148/1‑115 (MQ=255)                                                                                             aCGTCGAAAGACTCTTCCAGCCAAGCCCTTTCCTCTTGTAATTAATAAGGCGTCTAAT‑GACGCCTTATTATTTCCCTTTGATTATCAAGGATTAATTAAATTCATTCCTGGCAGGAAAATGGCTTAACATTTGTTAGACTTATGGTTGTc                                                           <  4:10646/150‑1 (MQ=255)                                                                                              cGTCGAAAGACTCTTCCAGCCAAGCCCTTTCTTCTTGTAATTAATAAGGCGTCTAAT‑GACGCCTTATTATTTCCCTTTGATTATCAAGGATTAATTAAATTCATTCCTGGCAGGAAAATGGCTTAACATTTGTTAGACTTATGGTTGTCg                                                          <  4:450218/150‑1 (MQ=255)                                                                                                    aaGACTCTTCCAGCCAAGCCCTTTCTTCTTGTAATTAATAAGGCGTCTAAT‑GACGCCTTATTATTTCCCTTTGATTATCAAGGATTAATTAAATTCATTCCTGGCAGGAAAATGGCTTAACATTTGTTAGACTTATGGTTGTCGGCTTCa                                                    <  2:177345/150‑1 (MQ=255)                                                                                                      gACTCTTCCAGCCAAGCCCTTTCTTCTTGTAATTAATAAGGCGTCTAAT‑GACGCCTTATTATTTCCCTTTGATTATCAAGGATTAATTAAATTCATTCCTGGCAGGAAAATGGCTTAACATTTGTTAGACTTATGGTTGTCGGCTTCATa                                                  <  4:438043/150‑1 (MQ=255)                                                                                                      gACTCTTCCAGCCAAGCCCTTTCTTCTTGTAATTAATAAGGCGTCTAAT‑GACGCCTTATTATTTCCCTTTGATTATCAAGGATTAATTAAATTCATTCCTGGCAGGAAAATGGCTTAACATTTGTTAGACTTATGGTTGTCGGCTTCATa                                                  <  1:710532/150‑1 (MQ=255)                                                                                                      gACTCTTCCAGCCAAGCCCTTTCTTCTTGTAATTAATAAGGCGTCTAAT‑GACGCCTTATTATTTCCCTTTGATTATCAAGGATTAATTAAATTCATTCCTGGCAGGAAAATGGCTTAACATTTGTTAGACTTATGGTTGTCGGCTTCATa                                                  >  3:369190/1‑150 (MQ=255)                                                                                                         tctTCCAGCCAAGCCCTTTCTTCTTGTAATTAATAAGGCGTCTAAT‑GACGCCTTATTATTTCCCTTTGATTATCAAGGATTAATTAAATTCATTCCTGGCAGGAAAATGGCTTAACATTTGTTAGACTTATGGTTGTCGGCTTCATAggg                                               >  1:216321/1‑150 (MQ=255)                                                                                                         tctTCCAGCCAAGCCCTTTCTTCTTGTAATTAATAAGGCGTCTAAT‑GACGCCTTATTATTTCCCTTTGATTATCAAGGATTAATTAAATTCATTCCTGGCAGGAAAATGGCTTAACATTTGTTAGACTTATGGTTGTCGGCTTCATAggg                                               >  1:216312/1‑150 (MQ=255)                                                                                                                 ccAAGCCCTTTCTTCTTGTAATTAATAAGGCGTCTAAT‑GACGCCTTATTATTTCCCTTTGATTATCAAGGATTAATTAAATTCATTCCTGGCAGGAAAATGGCTTAACATTTGTTAGACTTATGGTTGTCGGCTTCATAGGGAGAATAAc                                       <  2:867433/150‑1 (MQ=255)                                                                                                                 ccAAGCCCTTTCTTCTTGTAATTAATAAGGCGTCTAAT‑GACGCCTTATTATTTCCCTTTGATTATCAAGGATTAATTAAATTCATTCCTGGCAGGAAAATGGCTTAACATTTGTTAGACTTATGGTTGTCGGCTTCATAGGGAGAATAAc                                       >  2:889188/1‑150 (MQ=255)                                                                                                                   aaGCCCTTTCTTCTTGTAATTAATAAGGCGTCTAAT‑GACGCCTTATTATTTCCCTTTGATTATCAAGGATTAATTAAATTCATTCCTGGCAGGAAAATGGCTTAACATTTGTTAGACTTATGGTTGTCGGCTTCATAGGGAGCATAACAt                                     >  3:53862/1‑150 (MQ=255)                                                                                                                   aaGCCCTTTCTTCTTGTAATTAATAAGGCGTCTAAT‑GACGCCTTATTATTTCCCTTTGATTATCAAGGATTAATTAAATTCATTCCTGGCAGGAAAATGGCTTAACATTTGTTAGACTTATGGTTGTCGGCTTCATAGGGAGAATAACAt                                     >  2:861234/1‑150 (MQ=255)                                                                                                                       ccTTTCTTCTTGTAATTAATAAGGCGTCTAAT‑GACGCCTTATTATTTCCCTTTGATTATCAAGGATTAATTAAATTCATTCCTGGCAGGAAAATGGCTTAACATTTGTTAGACTTATGGTTGTCGGCTTCATAGGGAGAATAACATGAGc                                 >  1:4278/1‑150 (MQ=255)                                                                                                                         tttCTTCTTGTAATTAATAAGGCGTCTAAT‑GACGCCTTATTATTTCCCTTTGATTATCAAGGATTAATTAAATTCATTCCTg                                                                                                   >  3:577520/1‑82 (MQ=255)                                                                                                                         tttCTTCTTGTAATTAATAAGGCGTCTAAT‑GACGCCTTATTATTTCCCTTTGATTATCAAGGATTAATTAAATTCATTCCTg                                                                                                   <  4:577520/82‑1 (MQ=255)                                                                                                                                 tGTAATTAATAAGGCGTCTAAT‑GACGCCTTATTATTTCCCTTTGATTATCAAGGATTAATTAAATTCATTCCTGGCAGGAAAATGGCTTAACATTTGTTAGACTTATGGTTGTCGGCTTCATAGGGAGAATAACATGAGCATTATTAAAg                       >  1:701884/1‑150 (MQ=255)                                                                                                                                    aattaatAAGGCGTCTAAT‑GACGCCTTATTATTTCCCTTTGATTATCAAGGATTAATTAAATTCATTCCTGGCAGGAAAATGGCTTAACATTTGTTAGACTTATGGTTGTCGGCTTCATAGGGAGAATAACATGAGCATTATTAAAGAAt                    >  3:418487/1‑150 (MQ=255)                                                                                                                                    aaataataaGGCGTC‑ATTAGACGCCTTATTATTTCCCTTTGATTATCAAGGATTAATTAAATTCATTCCTGGCAGGAAAATGGCTTAACATTTGTTAGACTTATGGTTGTCg                                                          <  1:11809/109‑1 (MQ=38)                                                                                                                                    aaataataaGGCGTC‑ATTAGACGCCTTATTATTTCCCTTTGATTATCAAGGATTAATTAAATTCATTCCTGGCAGGAAAATGGCTTAACATTTGTTAGACTTATGGTTGTCg                                                          >  2:11809/4‑112 (MQ=38)                                                                                                                                     aataataaGGCGTC‑ATTAGACGCCTTATTATTTCCCTTTGATTATCAAGGATTAATTAAATTCATTCCTGGCAGGAAAATGGCTTAACAttt                                                                             >  2:856509/3‑92 (MQ=37)                                                                                                                                     aataataaGGCGTC‑ATTAGACGCCTTATTATTTCCCTTTGATTATCAAGGATTAATTAAATTCATTCCTGGCAGGAAAATGGCTTAACAttt                                                                             <  1:856509/90‑1 (MQ=37)                                                                                                                                       taataaGGCGTCTAAT‑GACGCCTTATTATTTCCCTTTGATTATCAAGGATTAATTAAATTCATTCCTGGCAGGAAAATGGCTTAACATTTGTTAGACTTATGGTTGTCGGCTTCATAGGGAGAATAACATGAGCATTATTAAAGAATTTc                 >  4:440151/1‑150 (MQ=255)                                                                                                                                        aataaGGCGTCTAAT‑GACGCCTTATTATTTCCCTTTGATTATCAAGGATTAATTAAATTCATTCCTGGCAGGAAAATGGCTTaa                                                                                  <  2:397937/84‑1 (MQ=255)                                                                                                                                        aataaGGCGTCTAAT‑GACGCCTTATTATTTCCCTTTGATTATCAAGGATTAATTAAATTCATTCCTGGCAGGAAAATGGCTTaa                                                                                  >  1:397937/1‑84 (MQ=255)                                                                                                                                         ataaGGCGTCTAAT‑GACGCCTTATTATTTCCCTTTGATTATCAAGGATTAATTAAATTCATTCCTGGCAGGAAAATGGCTTAACATTTGTTAGACTTATGGTTGTCGGCTTCATAGGGAGAATAACATGAGCATTATTAAAGAATTTcgc               <  2:701884/150‑1 (MQ=255)                                                                                                                                          taaGGCGTCTAAT‑GACGCCTTATTATTTCCCTTTGATTATCAAGGATTAATTAAATTCATTCCTGGCAGGAAAATGGCTTaa                                                                                  <  2:456640/82‑1 (MQ=255)                                                                                                                                          taaGGCGTCTAAT‑GACGCCTTATTATTTCCCTTTGATTATCAAGGATTAATTAAATTCATTCCTGGCAGGAAAATGGCTTaa                                                                                  >  1:456640/1‑82 (MQ=255)                                                                                                                                          taaGGCGTCTAAT‑GACGCCTTATTATTTCCCTTTGATTATCAAGGATTAATTAAATTCATTCCTGGCAGGAAAATGGCTTAACATTTGTTAGACTTATGGTTGTCGGCTTCATAGGGAGAATAACATGAGCATTATTAAAGAATTTcgcg              >  4:126163/1‑150 (MQ=255)                                                                                                                                           aaGGCGTCTAAT‑GACGCCTTATTATTTCCCTTTGATTATCAAGGATTAATTAAATTCATTCCTGGCAGGAAAATGGCTTAACATTTGTTAGACTTATGGTTGTCGGCTTCATAGGGAGAATAACATGAGCATTATTAAAGAATTTCGCGa             >  4:409828/1‑150 (MQ=255)                                                                                                                                              gCGTCTAAT‑GACGCCTTATTATTTCCCTTTGATTATCAAGGATTAATTAAATTCATTCCTGGCAGGAAAATgg                                                                                       <  1:854071/73‑1 (MQ=255)                                                                                                                                              gCGTCTAAT‑GACGCCTTATTATTTCCCTTTGATTATCAAGGATTAATTAAATTCATTCCTGGCAGGAAAATgg                                                                                       >  2:854071/1‑73 (MQ=255)                                                                                                                                               cGTCTAAT‑GACGCCTTATTATTTCCCTTTGATTATCAAGGATTAATTAAATTCATTCCTGGCAGGAAAATGGCTTAACATTTGTTAGACTTATGGTTGTCGGCTTCATAGGGAGAATAACATGAGCATTATTAAAGAATTTCGCGAAttt         <  2:842622/150‑1 (MQ=255)                                                                                                                                               cGTCTAAT‑GACGCCTTATTATTTCCCTTTGATTATCAAGGATTAATTAAATTCATTCCTGGCAGGAAAATGGCTTAACATTTGTTAGACTTATGGTTGTCGGCTTCATAGGGAGAATAACATGAGCATTATTAAAGAATTTCGCGAAttt         >  1:505170/1‑150 (MQ=255)                                                                                                                                                      t‑GACGCCTTATTATTTCCCTTTGATTATCAAGGATTAATTAAATTCATTCCTGGCAGGAAAATGGCTTAACATTTGTTAGACTTATGGTTGTCGGCTTCATAGGGAGAATAACATGAGCATTATTAAAGAATTTCGCGAATTTGCGATgc  >  2:914153/1‑150 (MQ=255)                                                                                                                                                      |                                                                                                                                                       TGGAAACGACGTGATGATTGCCAATGACAATCTGCGCATTGAGCAAGGCGATCACGTAATTATGTTCCTCACAGATAAAAAGTTTATTACCGACGTCGAAAGACTCTTCCAGCCAAGCCCTTTCTTCTTGTAATTAATAAGGCGTCTAAT‑GACGCCTTATTATTTCCCTTTGATTATCAAGGATTAATTAAATTCATTCCTGGCAGGAAAATGGCTTAACATTTGTTAGACTTATGGTTGTCGGCTTCATAGGGAGAATAACATGAGCATTATTAAAGAATTTCGCGAATTTGCGATGC  >  NC_000913_3_pae_tpiA/3437762‑3438060

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.