Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_000913_3_pae_tpiA	3423744–3424234	3424576–3424238	5–833	26 [25]	[25] 27	[rrfD]–[rrlD]	[rrfD],[rrlD]

GTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTA‑AGCCTCCCACC‑TATCCTACACATCAAGGCTCAATGTTCAGTGTCAAGCTATAGTAAAGGTTCACGGG  >  NC_000913_3_pae_tpiA/3424509‑3424720                                                                     |                                                                                                                                                  gTTACTCTTTAGGAGGAGCCCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTA‑AGCCt                                                                 <  2:339876/150‑1 (MQ=17)     ctctTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTA‑AGCCTCCCa                                                             <  2:627113/150‑1 (MQ=32)      tctTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTA‑AGCCTCCCAc                                                            >  1:131246/1‑150 (MQ=32)        tttAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTA‑AGCCTCCCACC‑t                                                         >  3:449632/1‑150 (MQ=32)        tttAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTA‑AGCCTCCCACC‑t                                                         <  3:164685/150‑1 (MQ=32)            ggaggaGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTA‑AGCCTCCCACC‑TATcc                                                     <  1:399210/150‑1 (MQ=32)                                   tACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTA‑AGCCTCCCACC‑TATCCTACACATCAAGGCTCAATGTTCa                              <  2:46607/150‑1 (MQ=32)                                   tACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTA‑AGCCTCCCACC‑TATCCTACACATCAAGGCCCAATGTTCa                              >  3:432663/1‑150 (MQ=17)                                        accaGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTa                                                                       <  1:152068/106‑1 (MQ=31)                                        accaGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTa                                                                       >  2:152068/1‑106 (MQ=31)                                         ccaGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTA‑AGCCTCCCACC‑TATCCTACACATCAAGGCTCAATGTTCAGTGTCa                        >  2:70025/1‑150 (MQ=32)                                         ccaGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTA‑AGCCTCCCACC‑TATCCTACACATCAAGGCTCAATGTTCAGTGTCa                        <  2:131246/150‑1 (MQ=32)                                         ccaGACACTGTCCGCAACCCGGAGTACGGGTCAACGTTAGAACATCAAACATTAAAGTGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCTTCA‑TGATACGGCCACCCCCG‑AAACCTACACATCAAGGCTCAATGTTCAGTGTCa                        <  2:391082/150‑1 (MQ=1)                                                  gTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAGCATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTA‑AGCCTCCCACC‑TATCCTACACATCAAGGCTCAATGTTCAGTGTCAAGCTATAGt               <  3:91061/150‑1 (MQ=17)                                                  gTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTA‑AGCCTCCCACC‑TATCCTACCCATCAAGGCTCAATGTTCAGTGTCAAGCTATAGt               <  3:460612/150‑1 (MQ=17)                                                   tCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTA‑AGCCTCCCACC‑TATCCTACACATCAAGGCTCAATGtt                                >  4:461142/1‑132 (MQ=33)                                                   tCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTA‑AGCCTCCCACC‑TATCCTACACATCAAGGCTCAATGtt                                <  3:461142/132‑1 (MQ=33)                                                   tCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTA‑AGCCTCCCACC‑TATCCTACACATCAAGGCTCAATGTTCAGTGTCAAGCTATAGTa              >  4:440074/1‑150 (MQ=32)                                                   tCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTACATGCAGACTGGCGTCCACACTTCTA‑AGCCTCCCACC‑TATCCTACACATCAAGGCTCAATGtt                                <  4:50239/132‑1 (MQ=18)                                                   tCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTACATGCAGACTGGCGTCCACACTTCTA‑AGCCTCCCACC‑TATCCTACACATCAAGGCTCAATGtt                                >  3:50239/1‑132 (MQ=18)                                                     cGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGTCGTCC‑TAATGATA‑CGGCCACCACCGTGACCTACACATCAAGGCTCAATGTTCAGTGTCAAGCTATAGTaaa            <  4:71291/150‑1 (MQ=1)                                                     cGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTA‑AGCCTCCCACC‑TATCCTACACATCAAGGCTCAATGTTCAGTGTCAAGCTATAGTaaa            <  3:402922/150‑1 (MQ=32)                                                       cAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTA‑AGCCTCCCACC‑TATCCTACACATCAAGGCTCAATGTTCAGTGTCAAGCTATAGTAAAgg          >  4:261382/1‑150 (MQ=32)                                                             ggATTACGAGTCAACGTCAGCACATCACATATTAAAGTCTGGCATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTA‑AGCCTCCCACC‑TATCCTACACATCAAGGCTCAATGTTCAGTGTCAAGCTATAGTAAAGGTTCACg    <  3:134729/150‑1 (MQ=11)                                                               aTTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTA‑AGCCTCCCACC‑TATCCTACACATCAAGGCTCAATGTTCAGTGTCAAGCTATAGTAAAGGTTCACggg  <  1:3066/150‑1 (MQ=32)                                                                     ggTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTA‑AGCCTCCCACC‑TATCCTACACATCAAGGCTCAATGTTCAGTGTCAAGCtat                  >  2:627689/1‑128 (MQ=33)                                                                     ggTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTA‑AGCCTCCCACC‑TATCCTACACATCAAGGCTCAATGTTCAGTGTCAAGCtat                  <  1:627689/128‑1 (MQ=33)                                                                     |                                                                                                                                                  GTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTA‑AGCCTCCCACC‑TATCCTACACATCAAGGCTCAATGTTCAGTGTCAAGCTATAGTAAAGGTTCACGGG  >  NC_000913_3_pae_tpiA/3424509‑3424720

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑