New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913_3_pae_tpiA	= 1175520	76 (0.800)	12 (0.130)	10/266	11.1	14.1%	coding (94/1200 nt)	lolC	lipoprotein‑releasing system transmembrane protein
	?	NC_000913_3_pae_tpiA	= 1175547	73 (0.800)					coding (121/1200 nt)	lolC	lipoprotein‑releasing system transmembrane protein
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

CCATCTTGCTTTCGCTTATATACTCGTGTCTTTGCTACAGCAACCAGACGGATTTCATGTACCAACCTGTCGCTCTATTTATTGGCCTGCGTTACATGCGT‑GGGCGTGCAGCGGATCGCTTCGGTCGTTTCGTCTCCTGGCTTTCTACCATCGGCATTACCCTCGGGGTGATGGCGCTGGTCACAGTATTGTCAGTGATGAACGGCTTTGAGCGCGAGCTGCAAAACAACATCCTTGGCCTGATGCCACAGGCAATTCTCTCTTCTGAGCATGGCTCTCTTAACCCGCAGCAACTCCCA  >  NC_000913_3_pae_tpiA/1175371‑1175669                                                                                                                                                       |                                                                                                                                                      ccATCTTGCTTTCGCTTATATACTCGTGTCTTTGCTACAGCAACCAGACGGATTTCATGTACCAACCTGTCGCTCTATTTATTGGCCTGCGTTACATGCGT‑GGGCGTGCAGCGGATCGCTTCGGTCGTTTCGTCTCCTGGCTTTCTACCa                                                                                                                                                       >  4:619941/1‑150 (MQ=255)   aTCTTGCTTTCGCTTATATACTCGTGTCTTTGCTACAGCAACCAGACGGATTTCATGTACCAACCTGTCGCTCTATTTATTGGCCTGCGTTACATGCGT‑GGGCGTGCAGCGGATCGCTTCGGTCGTTTCGTCTCCTGGCTTTCTACCATc                                                                                                                                                     >  1:881860/1‑150 (MQ=255)    tCTTGCTTTCGCTTATATACTCGTGTCTTTGCTACAGCAACCAGACGGATTTCATGTACCAACCTGTCGCTCTATTTATTGGCCTGCGTTACATGCGT‑GGGCGTGCAGCGGATCGCTTCGGTCGTTTCGTCTCCTGGCTTTCTACCATCg                                                                                                                                                    <  4:41860/150‑1 (MQ=255)         cTTTCGCTTATATACTCGTGTCTTTGCTACAGCAACCAGACGGATTTCATGTACCAACCTGTCGCTCTATTTATTGGCCTGCGTTACATGCGT‑GGGCGTGCAGCGGATCGCTTCGGTCGTTTCGTCTCCTGGCTTTCTACCATCGGCAtt                                                                                                                                               >  2:26691/1‑150 (MQ=255)                ttATATACTCGTGTCTTTGCTACAGCAACCAGACGGATTTCATGTACCAACCTGTCGCTCTATTTATTGGCCTGCGTTACATGCGT‑GGGCGTGCAGCGGATCGCTTCGGTCGTTTCGTCTCCTGGCTTTCTACCATCGGCATTACCCTCg                                                                                                                                        <  3:415750/150‑1 (MQ=255)                  atataCTCGTGTCTTTGCTACAGCAACCAGACGGATTTCATGTACCAACCTGTCGCTCTATTTATTGGCCTGCGTTACATGCGT‑GGGCGTGCAGCGGATCGCTTCGGTCGTTTCGTCTCCTGGCTTTCTACCATCGGCATTACCCTCggg                                                                                                                                      <  3:236336/150‑1 (MQ=255)                  atataCTCGTGTCTTTGCTACAGCAACCAGACGGATTTCATGTACCAACCTGTCGCTCTATTTATTGGCCTGCGTTACATGCGT‑GGGCGTGCAGCGGATCGCTTCGGTCGTTTCGTCTCCTGGCTTTCTACCATCGGCATTACCCTCggg                                                                                                                                      >  2:995973/1‑150 (MQ=255)                      aCTCGTGTCTTTGCTACAGCAACCAGACGGATTTCATGTACCAACCTGTCGCTCTATTTATTGGCCTGCGTTACATGCGT‑GGGCGTGCAGCGGATCGCTTCGGTCGTTTCGTCTCCTGGCTTTCTACCATCGGCATTACCCTCGGGGTGa                                                                                                                                  <  2:1026519/150‑1 (MQ=255)                         cGTGTCTTTGCTACAGCAACCAGACGGATTTCATGTACCAACCTGTCGCTCTATTTATTGGCCTGCGTTACATGCGT‑GGGCGTGCAGCGGATCGCTTCGGTCGTTTCGTCTCCTGGCTTTCTACCATCGGCATTACCCTCGGGGTGATgg                                                                                                                               >  2:17902/1‑150 (MQ=255)                          gtgtCTTTGCTACAGCAACCAGACGGATTTCATGTACCAACCTGTCGCTCTATTTATTGGCCTGCGTTACATGCGT‑GGGCGTGCAGCGGCTAGCTTCGGTCGTATCGTCTACTGGCTTTCTAACCTCGGCATTACCCACGGGGTGATGgc                                                                                                                              >  3:384614/1‑150 (MQ=255)                               tttGCTACAGCAACCAGACGGATTTCATGTACCAACCTGTCGCTCTATTTATTGGCCTGCGTTACATGCGT‑GGGCGTGCAGCGGATCGCTTCGGTCGTTTCGTCTCCTGGCTTTCTACCATCGGCATTACCCTCGGGGTGATGGCGCTgg                                                                                                                         <  1:995973/150‑1 (MQ=255)                                ttGCTACAGCAACCAGACGGATTTCATGTACCAACCTGTCGCTCTATTTATTGGCCTGCGTTACATGCGT‑GGGCGTGCAGCGGATCGCTTCGGTCGTTTCGTCTCCTGGCTTTCTACCATCGGCATTACCCTCGGGGTGATGGCGCTGGt                                                                                                                        <  4:588107/150‑1 (MQ=255)                                  gCTACAGCAACCAGACGGATTTCATGTACCAACCTGTCGCTCTATTTATTGGCCTGCGTTACATGCGT‑GGGCGTGCAGCGGATCGCTTCGGTCGTTTCGTCTCCTGGCTTTCTACCATCGGCATTACCCTCGGGGTGATGGCGCTgcgga                                                                                                                      >  4:325478/1‑146 (MQ=255)                                    tACAGCAACCAGACGGATTTCATGTGCCAACCTGTCGCTCTTTTTATTGGCCTGCGTTACATGCGT‑GGGCGTGCAGCGGATCGCTTCCGTCGTTTCGTCTCCTGGCTTTCTACCCTCGGCATTACCCTTGGGGTGATGGCGCTGGTcaca                                                                                                                    <  2:408290/150‑1 (MQ=255)                                    tACAGCAACCAGACGGATTTCATGTACCAACCTGTCGCTCTATTTATTGGCCTGCGTTACATGCGT‑GGGCGTGCAGCGGGTCGCTTCGGTCGTTTCGTCTCCTGGCTTTCTACCATCGGCATTACCCTCGGGGTGATGGCGCTGGTcaca                                                                                                                    <  1:630978/150‑1 (MQ=255)                                         cAACCAGACGGATTTCATGTACCAACCTGTCGCTCTATTTATTGGCCTGCGTTACATGCGT‑GGGCGTGCAGCGGATCGCTTCGGTCGTTTCGTCTCCTGGCTTTCTACCATCGGCATTACCCTCGGGGTGATGGCGCTGGTCACAGTAtt                                                                                                               <  2:181400/150‑1 (MQ=255)                                            ccAGACGGATTTCATGTACCAACCTGTCGCTCTATTTATTGGCCTGCGTTACATGCGT‑GGGCGTGCAGCGGATCGCTTCGGTCGTTTCGTCTCCTGGCTTTCTACCATCGGCATTACCCTCGGGGTGATGGCGCTGGTCACAGTATTGTc                                                                                                            >  1:902773/1‑150 (MQ=255)                                             cAGACGGATTTCATGTACCAACCTGTCGCTCTATTTATTGGCCTGCGTTACATGCGT‑GGGCGTGCAGCGGATCGCTTCGGTCGTTTCGTCTCCTGGCTTTCTACCATCGGCATTACCCTCGGGGTGATGGCGCTGGTCACAGTATTGTCa                                                                                                           <  1:852657/150‑1 (MQ=255)                                                  ggATTTCATGTACCAACCTGTCGCTCTATTTATTGGCCTGCGTTACATGCGT‑GGGCGTGCAGCGGATCGCTTCGGTCGTTTCGTCTCCTGGCTTTCTACCATCGGCATTACCCTCGGGGTGATGGCGCTGGTCACAGTATTGTCAGtgat                                                                                                      <  1:52636/150‑1 (MQ=255)                                                  ggATTTCATGTACCAACCTGTCGCTCTATTTATTGGCCTGCGTTACATGCGT‑GGGCGTGCAGCGGATCGCTTCGGTCGTTTCGTCTCCTGGCTTTCTACCATCGGCATTACCCTCGGGGTGATGGCGCTGGTCACAGTATTGTCAGtgat                                                                                                      >  1:496406/1‑150 (MQ=255)                                                  ggATTTCATGTACCAACCTGTCGCTCTATTTATTGGCCTGCGTTACATGCGT‑GGGCGTGCAGCGGATCGCTTCGGTCGTTTCGTCTCCTGGCTTTCTACCATCGGCA‑TACCCTCGGGGTGATGGCGCTGGTCACAGTATTGTCAGtgatg                                                                                                     >  3:110027/1‑150 (MQ=255)                                                     tttCATGTACCAACCTGTCGCTCTATTTATTGGCCTGCGTTACATGCGTGGGGCGTGCAGCGGATCGCTTCGGTCGTTTCGTCTCCTGGCTTTCTACCATCGGCATTACCCTCGGGGTGATGGCGCTGGTCACAGGATTGTCACtgatga                                                                                                    >  2:678021/1‑150 (MQ=255)                                                     tttCATGTACCAACCTGTCGCTCTATTTATTGGCCTGCGTTACATGCGT‑GGGCGTGCAGCGGATCGCTTCGGTCGTTTCGTCTCCTGGCTTTCTACCATCGGCATTACCCTCGGGGTGATGGCGCTGGTCACAGTATTGTCAGtga                                                                                                       >  1:12064/1‑146 (MQ=255)                                                     tttCATGTACCAACCTGTCGCTCTATTTATTGGCCTGCGTTACATGCGT‑GGGCGTGCAGCGGATCGCTTCGGTCGTTTCGTCTCCTGGCTTTCTACCATCGGCATTACCCTCGGGGTGATGGCGCTGGTCACAGTATTGTCAGtga                                                                                                       <  2:12064/146‑1 (MQ=255)                                                         aTGTACCAACCTGTCGCTCTATTTATTGGCCTGCGTTACATGCGT‑GGGCGTGCAGCGGATCGCTTCGGTCGTTTCGTCTCCTGGCTTTCTACCATCGGCATTACCCTCGGGGTGATGGCGCTGGTCACAGTATTGTCAGTGATGAACGGc                                                                                               >  1:130741/1‑150 (MQ=255)                                                            tACCAACCTGTCGCTCTATTTATTGGCCTGCGTTACATGCGT‑GGGCGTGCAGCGGATCGCTTCGGTCGTTTCGTCTCCTGGCTTTCTACCATCGGCATTACCCTCGGGGTGATGGCGCTGGTCACAGTATTGTCAGTGATGAACGGCttt                                                                                            <  1:436041/150‑1 (MQ=255)                                                               cAACCTGTCGCTCTATTTATTGGCCTGCGTTACATGCGT‑GGGCGTGCAGCGGATCGCTTCGGTCGTTTCGTCTCCTGGCTTTCTACCATCGGCATTACCCTCGGGGTGATGGCGCTg                                                                                                                          >  1:618936/1‑117 (MQ=255)                                                               cAACCTGTCGCTCTATTTATTGGCCTGCGTTACATGCGT‑GGGCGTGCAGCGGATCGCTTCGGTCGTTTCGTCTCCTGGCTTTCTACCATCGGCATTACCCTCGGGGTGATGGCGCTg                                                                                                                          <  2:618936/117‑1 (MQ=255)                                                                aaCCTGTCGCTCTATTTATTGGCCTGCGTTACATGCGT‑GGGCGTGCAGCGGATCGCTTCGGTCGTTTCGTCTCCTGGCTTTCTACCATCGGCATTACCCTCGGGGTGATGGCGCTGGTCACAGTATTGTCAGTGATGAACGGCTTTGAgc                                                                                        <  2:902773/150‑1 (MQ=255)                                                                       cGCTCTATTTATTGGCCTGCGTTACATGCGT‑GGGCGTGCAGCGGATCGCTTCGGTCGTTTCGTCTCCTGGCTTTCTACCATCGGCATTACCCTCGGGGTGATGGCGCTGGTCACAGTATTGTCAGTGATGAACGGCTTTGAGCGCGAGCt                                                                                 >  4:521824/1‑150 (MQ=255)                                                                         ctctATTTATTGGCCTGCGTTACATGCGT‑TGGCGTGCAGCGGATCGCTTCGGTCGTTTCGTCTCCTGGCTTTCTACCATCTGCATTACCCTCGGGGTGATGGCGCTGGTCACATTTTTCTCAGTGATTAACTGCTTTGAGCGCGAGCttt                                                                               <  2:796552/150‑3 (MQ=255)                                                                         ctctATTTATTGGCCTGCGTTACATGCGT‑GGGCGTGCAGCGGATCGCTTCGGTCGTTTCGTCTCCTGGCTTTCTACCATCGGCATTACCCTCGGGGTGATGGCGCTGGTCACAGTATTGTCAGTGATGAACGGCTTTGAGCGCGAGCTGc                                                                               >  2:473991/1‑150 (MQ=255)                                                                            tatttattGGCCTGCGTTACATGCGT‑GGGCGTGCAGCGGATCGCTTCGGTCGTTTCGTCTCCTGGCTTTCTACCATCGGCATTACCCTCGGGGTGATGGCGCTGGTCACAGTATTGTCAGTGATGAACGGCTTTGAGCGCGAGCTGCaaa                                                                            >  1:960258/1‑150 (MQ=255)                                                                            tatttattGGCCTGCGTTACATGCGT‑GGGCGTGCAGCGGATCGCTTCGGTCGTTTCGTCTCCTGGCTTTCTACCATCGGCATTACCCTCGGGGTGATGGCGCTGGTCACAGTATTGTCAGTGATGAACGGCTTTGAGCGCGAGCTGCaaa                                                                            <  3:2890/150‑1 (MQ=255)                                                                            tatttattGGCCTGCGTTACATGCGT‑GGGCGTGCAGCGGATCGCTTCGGTCGTTTCGTCTCCTGGCTTTCTACCATCGGCATTACCCTCGGGGTGATGGCGCTGGTCACAGTATTGTCAGTGATGAACGGCTTTGAGCGCGAGCTGCaaa                                                                            >  3:398949/1‑150 (MQ=255)                                                                             atttattGGCCTGCGTTACATGCGT‑GGGCGTGCAGCGGATCGCTTCGGTCGTTTCGTCTCCTGGCTTTCTACCATCGGCATTACCCTCGGGGTGATGGCGCTGGTCACAGTATTGTCAGTGATGAACGGCTTTGAGCGCGAGCTGCaaa                                                                            >  4:434527/1‑149 (MQ=255)                                                                             atttattGGCCTGCGTTACATGCGT‑GGGCGTGCAGCGGATCGCTTCGGTCGTTTCGTCTCCTGGCTTTCTACCATCGGCATTACCCTCGGGGTGATGGCGCTGGTCACAGTATTGTCAGTGATGAACGGCTTTGAGCGCGAGCTGCaaa                                                                            <  3:434527/149‑1 (MQ=255)                                                                                 attGGCCTGCGTTACATGCGT‑GGGCGTGCAGCGGATCGCTTCGGTCGTTTCGTCTCCTGGCTTTCTACCATCGGCATTACCCTCGGGGTGATGGCGCTGGTCACAGTATTGTCAGTGATGAACGGCTTTGAGCGCGAGCTGCAAaacaac                                                                       <  1:766311/150‑1 (MQ=255)                                                                                  ttGGCCTGCGTTACATGCGT‑GGGCGTGCAGCGGATCGCTTCGGTCGTTTCGTCTCCTGGCTTTCTACCATCGGCATTACCCTCGGGGTGATGGCGCTGGTCACAGTATTGTCAGTGATGAACGGCTTTGAGCGCGAGCTGCAAAacaaca                                                                      <  2:689874/150‑1 (MQ=255)                                                                                           gTTACATGCGT‑GGGCGTGCAGCGGATCGCTTCGGTCGTTTCGTCTCCTGGCTTTCTACCATCGGCATTACCCTCGGGGTGATGGCGCTGGTCACAGTATTGTCAGTGATGAACGGCTTTGAGCGCGAGCTGCAAAACAACATCCTTGGcc                                                             >  2:213000/1‑150 (MQ=255)                                                                                              aCATGCGT‑GGGCGTGCAGCGGATCGCTTCGGTCGTTTCGTCTCCTGGCTTTCTACCATCGGCATTACCCTCGGGGTGATGGCGCTGGTCACAGTATTGTCAGTGATGAACGGCTTTGAGCGCGAGCTGCAAAACAACATCCTTGGCCTGa                                                          >  3:588238/1‑150 (MQ=255)                                                                                              aCATGCGT‑GGGCGTGCAGCGGATCGCTTCGGTCGTTTCGTCTCCTGGCTTTCTACCATCGGCATTACCCTCGGGGTGATGGCGCTGGTCACAGTATTGTCAGTGATGAACGGCTTTGAGCGCGAGCTGCAAAACAACATCCTTGGCCTGa                                                          <  1:971176/150‑1 (MQ=255)                                                                                              aCATGCGT‑GGGCGTGCAGCGGATCGCTTCGGTCGTTTCGTCTCCTGGCTTTCTACCATCGGCATTACCCTCGGGGTGATGGCGCTGGTCACAGTATTGTCAGTGATGAACGGCTTTGAGCGCGAGCTGCAAAACAACATCCTTGGCCTGa                                                          <  2:881860/150‑1 (MQ=255)                                                                                               cATGCGT‑GGGCGTGCAGCGGATCGCTTCGGTCGTTTCGTCTCCTGGCTTTCTACCATCGGCATTACCCTCGGGGTGATGGCGCTGGTCTCAGTATTGTCAGTGATGAACGGCTTTGAGCGCGAGCTGCAAAACAACATCCTTGGCCTGAt                                                         <  1:495141/150‑1 (MQ=255)                                                                                                aTGCGT‑GGGCGTGCAGCGGATCGCTTCGGTCGTTTCGTCTCCTGGCTTTCTACCATCGGCATTACCCTCGGGGTGATg                                                                                                                                <  4:109254/78‑1 (MQ=255)                                                                                                aTGCGT‑GGGCGTGCAGCGGATCGCTTCGGTCGTTTCGTCTCCTGGCTTTCTACCATCGGCATTACCCTCGGGGTGATg                                                                                                                                >  3:109254/1‑78 (MQ=255)                                                                                                aTGCGT‑GGGCGTGCAGCGGATCGCTTCGGTCGTTTCGTCTCCTGGCTTTCTACCATCGGCATTACCCTCGGGGTGATGGCGCTGGTCACAGTATTGTCAGTGATGAACGGCTTTGAGCGCGAGCTGCAAAACAACATCCTTGGCCTGATg                                                        >  2:354901/1‑150 (MQ=255)                                                                                                   cGT‑GGGCGTGCAGCGGATCGCTTCGGTCGTTTCGTCTCCTGGCTTTCTACCATCGGCATTCCCCTCGGGGTGATGGCGCTGGTCACAGTATTGTCAGTGATGAACGGCTTTGAGCGCGAGCTGCAAAACAACATCCTTGGCCTGATGCca                                                     <  1:17902/150‑1 (MQ=255)                                                                                                   cGT‑GGGCGTGCAGCGGATCGCTTCGGTCGTTTCGTCTCCTGGCTTTCTACCATCGGCATTACCCTCGGGGTGATGGCGCTGGTCACAGTATTGTCAGTGATGAACGGCTTTGAGCGCGAGCTGCAAAACAACATCCTTGGCCTGATGCca                                                     >  1:484237/1‑150 (MQ=255)                                                                                                     t‑GGGCGTGCAGCGGATCGCTTCGGTCGTTTCGTCTCCTGGCTTTCTACCATCGGCATTACCCTCGGGGTGATGGCGCTGGTCACAGTATTGTCAGTGATGAACGGCTTTGAGCGCGAGCTGCAAAACAACATCCTTGGCCTGATGCcaca                                                   <  1:25414/150‑1 (MQ=255)                                                                                                     t‑GGGCGTGCAGCGGATCGCTTCGGTCGTTTCGTCTCCTGGCTTTCTACCATCGGCATTACCCTCGGGGTGATGGCGCTGGTCACAGTATTGTCAGTGATGAACGGCTTTGAGCGCGAGCTGCAAAACAACATACTTGGCCGGATGCcaca                                                   >  1:523579/1‑150 (MQ=255)                                                                                                            tGCAGCGGATCGCTTCGGTCGTTTCGTCTCCTGGCTTTCTACCATCGGCA‑TACCCTCGGGGTGATGGCGCTGGTCACAGTATTGTCAGTGATGAACGGCTTTGAGCGCGAGCTGCAAAACAACATCCTTGGCCTGATGCCACAGGCAAtt                                            <  4:110027/150‑1 (MQ=255)                                                                                                             gCAGCGGACCGCTTCGGTCGTTTCGTCTCCTGGCTTTCTACCATCGGCATTACCCTCGGGGTGATGGCGCTGGTCACAGTATTGTCAGTGATGAACGCCTTTGTGCGCGAGCTGCAAAACAACATCCTTGGCCTGATGCCACAGGCAAtt                                            >  4:20378/1‑150 (MQ=255)                                                                                                               aGCGGATCGCTTCGGTCGTTTCGTCTCCTGGCTTTCTACCATCGGCATTACCCTCGGGGTGATGGCGCTGGTCACAGTATTGTCAGTGATGAACGGCTTTGAGCGCGAGCTGCAAAACAACATCCTTGGCCTGATGCCACAGGCAATtct                                          >  4:54557/1‑150 (MQ=255)                                                                                                               aGCGGATCGCTTCGGTCGTTTCGTCTCCTGGCTTTCTACCATCGGCATTACCCTCGGGGTGATGGCGCTGGTCACAGTATTGTCAGTGATGAACGGCTTTGAGCGCGAGCTGCAAAACAACATCCTTGGCCTGATGCCACAGGCAATtct                                          >  3:495159/1‑150 (MQ=255)                                                                                                                gCGGATCGCTTCGGTCGTTTCGTCTCCTGGCTTTCTACCATCGGCATTACCCTTGGGGTGATGGCGCTGGTCACAGTATTGTCAGTGATGAACGGCTTTGAGCGCGAGCTGCAAAACAACATCCTTGGCCTGATGCCACAGGCAATtctc                                         >  4:456836/1‑150 (MQ=255)                                                                                                                 cGGATCGCTTCGGTCGTTTCGTCTCCTGGCTTTCTACCATCGGCATTACCCTCGGGGTGATGGCGCTGGTCACAGTATTGTCAGTGATGAACGGCTTTGAGCGCGAGCTGCAAAACAACATCCTTGGCCTGATGCCACAGGCAATtctct                                        >  1:118249/1‑150 (MQ=255)                                                                                                                 cGGATCGCTTCGGTCGTTTCGTCTCCTGGCTTTCTACCATCGGCATTACCCTCGGGGTGATGGCGCTGGTCACAGTATTGTCAGTGATGAACGGCTTTGAGCGCGAGCTGCAAAACAACATCCTTGGCCTGATGCCACAGGCAATtctct                                        <  2:438680/150‑1 (MQ=255)                                                                                                                 cGGATCGCTTCGGTCGTTTCGTCTCCTGGCTTTCTACCATCGGCATTACCCTCGGGGTGATGGCGCTGGTCACAGTATTGTCAGTGATGAACGGCTTTGAACGCGAGCTGCAAAACAACATCCTTGGCCTGATGCCACAGGCAATtctct                                        <  3:619941/150‑1 (MQ=255)                                                                                                                  ggATCGCTTCGGTCGTTTCGTCTCCTGGCTTTCTACCATCGGCATTACCCTCGGGGTGATGGCGCTGGTCACAGTATTGTCAGTGATGAACGGCTTTGAGCGCGAGCTGCAAAACAACATCCTTGGCCTGATGCCACAGGCAATtctctc                                       <  1:804783/150‑1 (MQ=255)                                                                                                                        cTTCGGTCGTTTCGTCTCCTGGCTTTCTACCATCGGCATTACCCTCGGGGTGATGGCGCTGGTCACAGTATTGTCAGTGATGAACGGCTTTGAGCGCGAGCTGCAAAACAACATCCTTGGCCTGATGCCACAGGCAATTCTCTCTTCTGa                                 >  2:915285/1‑150 (MQ=255)                                                                                                                        cTTCGGTCGTTTCGTCTCCTGGCTTTCTACCATCGGCATTACCCTCGGGGTGATGGCGCTGGTCACAGTATTGTCAGTGATGAACGGCTTTGAGCGCGAGCTGCAAAACAACATCCTTGGCCTGATGCCACAGGCAATTCTCTCTTCTGa                                 >  1:524757/1‑150 (MQ=255)                                                                                                                            ggTCGTTTCGTCTCCTGGCTTTCTACCATCGGCATTACCCTCGGGGTGATGGCGCTGGTCAACGTATTGTCCGTGATCAACGGCTTTGAGCGCGAGCTGCAAAACAACATCCTTGACCTGATGCCACAGGCAATTCTCTCTTCTGAGCAt                             >  1:754833/1‑150 (MQ=255)                                                                                                                             gTCGTTTCGTCTCCTGGCTTTCTACCATCGGCATTACCCTCGGGGTGATGGCGCTGGTCACAGTATTGTCAGTGATGAACGGCTTTGAGCGCGAGCTGCAAAACAACATCCTTGGCCTGATGCCACAGGCAATTCTCTCTTCTGAGCATg                            >  2:857710/1‑150 (MQ=255)                                                                                                                              ccGTGTCGTCTCCTGGCTTTCTACCAGCGGCATTACCCTCGGGGGGATGGCGCTGGTCACAGTATTGTCAGTGATGAACGCCTTTGAGCGCGAGCTGCAAAACAACATCCTTGGCCTGATGCCACAGGCAATTCTCTCTTCTGAGCATgg                           <  4:350479/149‑1 (MQ=255)                                                                                                                                    cGTCTCCTGGCTTTCTACCATCGGCATTACCCTCGGGGTGATGGCGCTGGTCACAGTATTGTCAGTGATGAACGGCTTTGAGCGCGAGCTGCAAAACAACATCCTTGGCCTGATGCCACAGGCAATTCTCTCTTCTGAGCATGGctctct                     <  1:354901/150‑1 (MQ=255)                                                                                                                                           tgtcTTGCTGCCATCGGCATTGCCCTCGGTGTGATGGCGCTGGTCACAGTAGTGTCAGTGATGAACGGCTTTGAGCGCGATCTGCAAAACAACGTCCTTTGCCTGATGCCACAGGGAATTCTCGCTTCTGAGCATTGCTCTCTTAACCCg              <  4:384614/147‑1 (MQ=255)                                                                                                                                            ggCTTTCTACCATCGGCATTACCCTCGGGGTGATGGCGCTGGTCACAGTATTGTCAGtgatg                                                                                                     >  1:544557/1‑62 (MQ=255)                                                                                                                                            ggCTTTCTACCATCGGCATTACCCTCGGGGTGATGGCGCTGGTCACAGTATTGTCAGtgatg                                                                                                     <  2:544557/62‑1 (MQ=255)                                                                                                                                            ggCTTTCTACCATCGGCATTACCCTCGGGGTGATGGCGCTGGTCACAGTATTGTCAGTGATGAACGGCTTTGAGCGCGAGCTGCAAAACAACATCCTTGGCCTGATGCCACAGGCAATTCTCTCTTCTGAGCATGGCTCTCTTAACCCgc             <  1:473991/150‑1 (MQ=255)                                                                                                                                               tttCTACCATCGGCATTACCCTCGGGGTGATGGCGCTGGTCACAGTATTGTCAGTGATGAACGGCTTTGAGCGCGAGCTGCAAAACAACATCCTTGGCCTGATGGCACAGGCAATTCTCTCTTCTGAGCATGGGTCTCTTAACCCgcagc          >  1:643120/1‑150 (MQ=255)                                                                                                                                                 tCTACCATCGGCATTACCCTCGGGGTGATGGCGCTGGTCACAGTATTGTCAGTGATGAACGGCTTTGAGCGCGAGCTGCa                                                                              >  3:529829/1‑80 (MQ=255)                                                                                                                                                 tCTACCATCGGCATTACCCTCGGGGTGATGGCGCTGGTCACAGTATTGTCAGTGATGAACGGCTTTGAGCGCGAGCTGCa                                                                              <  4:529829/80‑1 (MQ=255)                                                                                                                                                     ccATCGGCATTACCCTCGGGGTGATGGCGCTGGTCACAGTATTGTCAGTGATGAACGGCTTTGAGCGCGAGCTGCAAAACAACATCCTTGGCCTGATGCCACAg                                                  >  1:554241/1‑104 (MQ=255)                                                                                                                                                     ccATCGGCATTACCCTCGGGGTGATGGCGCTGGTCACAGTATTGTCAGTGATGAACGGCTTTGAGCGCGAGCTGCAAAACAACATCCTTGGCCTGATGCCACAg                                                  <  2:554241/104‑1 (MQ=255)                                                                                                                                                      cATCGGCATTACCCTCGGGGTGATGGCGCTGGTCACAGTATTGTCAGTGATGAACGGCTTTGAGCGCGAGCTGCAAAACAACATCCTTGGCCTGATGCCACAGGCAATTCTCTCTTCTGAGCATGGCTCTCTTAACCCGCAGCAACTccc   <  2:316052/150‑1 (MQ=255)                                                                                                                                                       aTCGGCATTACCCTCGGGGTGATGGCGCTGGTCACAGTATTGTCAGTGATGAACGGCTTTGAGCGCGAGCTGCAAAACAACATCCTTGGCCTGATGCCACAGGCAATTCTCTCTTCTGAGCATGGCTCTCTTAACCCGCAGCAACTCCCa  >  1:471852/1‑150 (MQ=255)                                                                                                                                                       |                                                                                                                                                      CCATCTTGCTTTCGCTTATATACTCGTGTCTTTGCTACAGCAACCAGACGGATTTCATGTACCAACCTGTCGCTCTATTTATTGGCCTGCGTTACATGCGT‑GGGCGTGCAGCGGATCGCTTCGGTCGTTTCGTCTCCTGGCTTTCTACCATCGGCATTACCCTCGGGGTGATGGCGCTGGTCACAGTATTGTCAGTGATGAACGGCTTTGAGCGCGAGCTGCAAAACAACATCCTTGGCCTGATGCCACAGGCAATTCTCTCTTCTGAGCATGGCTCTCTTAACCCGCAGCAACTCCCA  >  NC_000913_3_pae_tpiA/1175371‑1175669

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.