New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913_3_pae_tpiA	= 781222	57 (0.750)	17 (0.230) +AT	12/268	7.8	17.4%	noncoding (76/76 nt)	lysY	tRNA‑Lys
	?	NC_000913_3_pae_tpiA	= 2521361	107 (1.410)					intergenic (+33/+232)	lysV/xapR	tRNA‑Lys/transcriptional activator of xapAB
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

ATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTG‑ACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATG  >  NC_000913_3_pae_tpiA/781073‑781369                                                                                                                                                       |                                                                                                                                                    aTTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTG‑ACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACccacca                                                                                                                                                     >  2:148641/1‑150 (MQ=33) aTTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTG‑ACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACccacca                                                                                                                                                     >  4:157315/1‑150 (MQ=33)       tCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTG‑ACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTa                                                                                                                                               <  2:415783/150‑1 (MQ=34)          gCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTG‑ACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTTAACa                                                                                                                                            >  2:179470/1‑150 (MQ=21)                agagCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTG‑ACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAAc                                                                                                                                      >  3:163236/1‑150 (MQ=38)                 gagCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTG‑ACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACt                                                                                                                                     <  1:740385/150‑1 (MQ=38)                 gagCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTG‑ACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACt                                                                                                                                     <  1:586914/150‑1 (MQ=38)                     aCCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTG‑ACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAAGATCAAACCCAGa                                                                                                                                 >  2:304009/1‑150 (MQ=255)                        tCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTG‑ACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCaaa                                                                                                                                       >  4:394923/1‑141 (MQ=37)                        tCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTG‑ACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCaaa                                                                                                                                       <  3:394923/141‑1 (MQ=37)                           atctcAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCTCCTTCCACTCGAGCAGATGGCTCCATACG‑AGGTCCGTTGTAGTGTTTAGCATTTGGTCGCATGTTCGAATCCTGTACGACCCACCAGTTTTAACATCAAACTCAGATGTTaa                                                                                                                           <  1:496443/146‑1 (MQ=9)                             tACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACGACTCGGGTAGTTAGCTCAGTTGGTAGAGCAGTTG‑ACTTTTAATTAGTTGGAGGGTGGTTCGAATCCTGCGCGACCCACAAGGTTTAACACTAAACTGAGATGTTAAGc                                                                                                                         >  4:123939/1‑150 (MQ=14)                                aaGGAGGGTGATGGCGGCACGATCCCGTGATCAGTCAACACTGGAAGCGTTTGCTGAAGGGGTAGAGCATAGG‑ACTTTTAATCAATTGTGCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCACACTCCTATGTTAAgagcc                                                                                                                      >  2:496443/1‑146 (MQ=2)                                 aggaggGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTG‑ACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGa                                                                                                                     <  1:241110/150‑1 (MQ=255)                                          tCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTG‑ACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACg                                                                                                            >  1:744266/1‑150 (MQ=255)                                                   cGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTG‑ACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAg                                                                                                   <  2:809712/150‑1 (MQ=255)                                                    gATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTG‑ACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGc                                                                                                  <  1:534383/150‑1 (MQ=255)                                                     aTCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTG‑ACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCa                                                                                                 >  4:76616/1‑150 (MQ=255)                                                     aTCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTG‑ACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCa                                                                                                 >  3:16066/1‑150 (MQ=255)                                                        ccGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTG‑ACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACg                                                                                              >  1:234844/1‑150 (MQ=255)                                                           tcatcaCCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTG‑ACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGcc                                                                                           <  1:48781/150‑1 (MQ=255)                                                              tcaCCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTG‑ACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGt                                                                                        >  4:298735/1‑150 (MQ=255)                                                                  ccaccaCTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTG‑ACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATg                                                                                                                               <  2:476830/107‑1 (MQ=255)                                                                  ccaccaCTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTG‑ACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATg                                                                                                                               >  1:476830/1‑107 (MQ=255)                                                                         tCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTG‑ACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGgcgagcga                                                                             >  3:93946/1‑150 (MQ=255)                                                                              tCGTTAGCTCAGTTGGTAGAGCAGTTG‑ACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGagcgaagcga                                                                        <  3:458521/150‑1 (MQ=255)                                                                              tCGTTAGCTCAGTTGGTAGAGCAGTTG‑ACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGagcgaagcga                                                                        >  1:398162/1‑150 (MQ=255)                                                                                 ttAGCTCAGTTGGTAGAGCAGTTG‑ACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTc                                                                     >  2:690594/1‑150 (MQ=255)                                                                                   aGCTCAGTTGGTAGAGCAGTTG‑ACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCAt                                                                   >  2:277880/1‑150 (MQ=255)                                                                                    gCTCAGTTGGTAGAGCAGTTG‑ACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATc                                                                  >  1:469814/1‑150 (MQ=255)                                                                                       cAGTTGGTAGAGCAGTTG‑ACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTg                                                               >  3:10611/1‑150 (MQ=255)                                                                                            ggTAGAGCAGTTG‑ACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGa                                                          >  1:704494/1‑150 (MQ=255)                                                                                                gagCAGTTG‑ACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACcca                                                      <  3:473617/150‑1 (MQ=255)                                                                                                 agCAGTTG‑ACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACccac                                                     <  4:93946/150‑1 (MQ=255)                                                                                                      ttG‑ACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATc                                                >  3:145256/1‑150 (MQ=255)                                                                                                            ttttAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTaaa                                           <  4:345403/150‑1 (MQ=255)                                                                                                             tttAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAg                                          >  3:461203/1‑150 (MQ=255)                                                                                                                  tCAATTGGTCGCAGGTTCGAATCCTGCNCGACCCACCAGTTTNAACGTCAAACTCAGATATTAAACGAGAAGGATACCGATGCCCCAGCACGGGCCCAGAGGGCGAGGGAAGCGAGTCACCCTAGACGACACACCAAGCTTAAAGACTgg                                     >  1:664997/1‑150 (MQ=17)                                                                                                                  tCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTgg                                     >  1:532783/1‑150 (MQ=255)                                                                                                                  tCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTgg                                     >  1:572793/1‑150 (MQ=255)                                                                                                                     aTTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGccc                                  >  3:186370/1‑150 (MQ=255)                                                                                                                        ggTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGa                               <  1:354114/150‑1 (MQ=255)                                                                                                                         gTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAg                              >  1:569417/1‑150 (MQ=255)                                                                                                                           cGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGc                                                                                                                         >  1:381887/1‑57 (MQ=255)                                                                                                                           cGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGc                                                                                                                         <  2:381887/57‑1 (MQ=255)                                                                                                                            gCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTaa                           >  1:768814/1‑150 (MQ=255)                                                                                                                                gTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAAt                       >  2:524639/1‑150 (MQ=255)                                                                                                                                  tCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCt                     <  2:776361/150‑1 (MQ=255)                                                                                                                                  tCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTGGCGCCGGCAACGGCCCGGAGGGCGAGGGAAGCGAGTCATCCTGCGCGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCt                     >  3:314113/1‑150 (MQ=21)                                                                                                                                   cGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCtt                    <  2:398162/150‑1 (MQ=255)                                                                                                                                     aaTCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTc                  <  3:157315/150‑1 (MQ=255)                                                                                                                                     aaTCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTc                  <  2:744266/150‑1 (MQ=255)                                                                                                                                      aTCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCa                 <  2:704494/150‑1 (MQ=255)                                                                                                                                       tCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAg                <  2:569417/150‑1 (MQ=255)                                                                                                                                               gACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACAcc        <  2:469814/150‑1 (MQ=255)                                                                                                                                                  ccaccaGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGt     >  1:317063/1‑150 (MQ=255)                                                                                                                                                  ccaccaGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGt     <  1:690594/150‑1 (MQ=255)                                                                                                                                                   caccaGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTa    >  4:210130/1‑150 (MQ=255)                                                                                                                                                     ccaGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATg  >  1:795869/1‑150 (MQ=255)                                                                                                                                                       |                                                                                                                                                    ATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTG‑ACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATG  >  NC_000913_3_pae_tpiA/781073‑781369

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.