New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913_3_pae_tpiA	1552011 =	70 (1.170)	5 (0.090)	5/266	7.6	7.2%	intergenic (+20/+387)	fdnI/yddM	formate dehydrogenase‑N, cytochrome B556 (gamma) subunit, nitrate‑inducible/putative DNA‑binding transcriptional regulator
	?	NC_000913_3_pae_tpiA	1552043 =	NA (NA)					intergenic (+52/+355)	fdnI/yddM	formate dehydrogenase‑N, cytochrome B556 (gamma) subunit, nitrate‑inducible/putative DNA‑binding transcriptional regulator
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

GAAGGTAAGTCGTCGCTGGGCGAAGAAACACCATCCGCGCTGGTATCGTGAAATCGAGAAGGCAGAAGCGAAAAAAGAGAGTGAAGAAGGGATATAAT‑CTCTTTTGAACTTTAAGCTGAAAATGGCGCTGTAAAAGGCGCCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTT  >  NC_000913_3_pae_tpiA/1551895‑1552173                                                                                                                                                      |                                                                                                                                   gaaggTAAGTCGTCGCTGGGCGAAGAAACACCATCCGCGCTGGTATCGTGAAATCGAGAAGGCAGAAGCGAAAAAAGAGAGTGAAGAAGGGATATAAT‑CTCTTTTGAACTTTAAGCTGAAAATGGCGCTGTAAAAGGCGCCATTTTCat                                                                                                                                    >  1:593291/1‑149 (MQ=255)  aaggTAAGTCGTCGCTGGGCGAAGAAACACCATCCGCGCTGGTATCGTGAAATCGAGAAGGCAGATGCGAAAAAAGAGAGTGAAGAAGGGATATAAT‑CTCTTTTCAACTTTAAGCTGAAAATGGCGCTGTAAAAGGCGCCATTTTCata                                                                                                                                   >  1:597748/1‑149 (MQ=255)  aaggTAAGTCGTCGCGGGGCGAAGAAAATCCATCCGCGCGGGTATGGTGAAATCGAGAAGGCAGAAGCGAAAAAAGAGAGGGAAGAAGGGATATAAT‑CTCTTTTGAACTTTAAGCTGAAAATGGCGCTGTAAAAGGCGCCATTTTCata                                                                                                                                   <  2:36355/149‑1 (MQ=255)    ggTAAGTCGTCGCTGGGCGAAGAAACACCATCCGCGCTGGTATCGTGAAATCTAGAAGGCAGAAGCGAAAGAAGAGAGTGAAGAAGGGATATAAT‑CTCTTTTGAACTTTAAGCTGAAAATGGCGCTGTAAAAGGCGCCATTTTCATAtt                                                                                                                                 <  1:963438/149‑1 (MQ=255)     gTAAGGCGTCGCTGGGCGAAGAAAAACCATCCGCGCTGGTATCGTGAAATCGAGAAGGCAGAAGCGAAAAAAGAGAGTGAAGAAGGGATATAAT‑CTCTTTTGAACTTTAAGCTGAAAATGGCGCTGTAAAAGGCGCCATTTTCATATTg                                                                                                                                <  2:242311/149‑1 (MQ=255)       aaGTCGTCGCTGGGCGAAGAAACACCATCCGCGCTGGTATCGTGAAATCGAGAAGGCAGAAGCGAAAAAAGAGAGTGAAGAAGGGATATAAT‑CTCTTTTGAACTTTAAGCTGAAAATGGCGCTGTAAAAGGCGCCATTTTCATATTGTa                                                                                                                              <  2:794201/149‑1 (MQ=255)         gtcgtcGCTGGGCGAAGAAACACCATCCGCGCTGGTATCGTGAAATCGAGAAGGCAGAAGCGAAAAAAGAGAGTGAAGAAGGGATATAAT‑CTCTTTTGAACTTTAAGCTGAAAATGGCGCTGTAAAAGGCGCCATTTTCATATTGTAGa                                                                                                                            <  1:654108/149‑1 (MQ=255)         gtcgtcGCTGGGCGAAGAAACACCATCCGCGCTGGTATCGTGAAATCGAGAAGGCAGAAGCGAAAAAAGAGAGTGAAGAAGGGATATAAT‑CTCTTTTGAACTTTAAGCTGAAAATGGCGCTGTAAAAGGCGCCATTTTCATATTGTAGa                                                                                                                            >  2:475065/1‑149 (MQ=255)         gtcgtcGCTGGGCGAAGAAACACCATCCGCGCTGGTATCGTGAAATCGAGAAGGCAGAAGCGAAAAAAGAGAGTGAAGAAGGGATATAAT‑CTCTTTTGAACTTTAAGCTGAAAATGGCGCTGTAAAAGGCGCCATCTTCATATCGTAGa                                                                                                                            >  2:503292/1‑149 (MQ=255)            gtcgCTGGGCGAAGAAACACCATCCGCGCTGGTATCGTGAAATCGAGAAGGCAGAAGCGAAAAAAGAGAGTGAAGAAGGGATATAAT‑CTCTTTTGAACTTTAAGCTGAAAATGGCGCTGTAAAAGGCGCCATTTTCATATTGTAGACaa                                                                                                                         >  1:513768/1‑149 (MQ=255)                cTGGGGGAAGAAACACCATCCGCGCTGGTATCGTGAAATCGAGAACGCAGAAGTGAAAAAAGAGAGTGAAGAAGGGATATAAT‑CTCTTTTGAACTTTAAGCTGAAAATGGCGCTGTAAAAGGCGCCATTTTCATATTGTAGACAACGTa                                                                                                                     <  1:270374/149‑1 (MQ=255)                      gaagaaACACCATCCGCGCTGGTATCGTGAAATCGAGAAGGCAGAAGCGAAAAAAGAGAGTGAAGAAGGGATATAAT‑CTCTTTTGAACTTTAAGCTGAAAATGGCGCTGTAAAAGGCGCCATTTTCATATTGTAGACAACGTAGGCttt                                                                                                               <  1:741388/149‑1 (MQ=255)                       aagaaACACCATCCGCGCTGGTATCGTGAAATCGAGAAGGCAGAAGCGAAAAAAGAGAGTGAAGAAGGGATATAAT‑CTCTTTTGAACTTTAAGCTGAAAATGGCGCTGTAAAAGGCGCCATTTTCATATTGTAGACCACGTAGGCTTTg                                                                                                              >  2:88082/1‑149 (MQ=255)                       aagaaACACCATCCGCGCTGGCATCGTGAAATCGAGAAAGCAGAAGCGAAAAAAGAGAGTGAAGAAGGGATATAAT‑CTCTTTTGAACTTTAAGCTGAAAATGGCGCTGTAAAAGGCGCCATTTTCATATTGTAGACACCGTAGGCTTTg                                                                                                              >  2:919597/1‑149 (MQ=255)                         gaaACACCATCCGCGCTGGTATCGTGAAATCGAGAAGGCAGAAGCGAAAAAAGAGCGTGAGGAAGGGATGTCCTACGCCCTT‑ATCTTTAAGCTGAAAATGGCGCTGTAAAAAGCGCCATTTTCATATTGTAGACAAAGTAGGCTGTGtt                                                                                                            >  1:244564/1‑149 (MQ=25)                         gaaACACCATCCGCGCTGGTATCGTGAAATCGAGAAGGCAGAAGCGAAAAAAGAGAGTGAAGAAGGGATATAAT‑CTCTTTTGAACTTTAAGCTGAAAATGGCGCTGTAAAAGGCGCCATTTTCATATTGTAGACAACGTAGGCTTTGtt                                                                                                            >  1:80659/1‑149 (MQ=255)                         gaaACACCATCCGCGCTGGTATCGTGAAATCGAGAAGGCAGAAGCGAAAAAAGAGAGTGAAGAAGGGATATAAT‑CTCTTTTGAACTTTAAGCTGAAAATGGCGCTGTAAAAGGCGCCATTTTCATATTGTAGACAACGTAGGCTTTGtt                                                                                                            >  1:539681/1‑149 (MQ=255)                         gaaACACCATCCGCGCTGGTATCGTGAAATCGAGAAGGCAGAAGCGAAAAAAGAGAGTGAAGAAGGGATATAAT‑CTCTTTTGAACTTTAAGCTGAAAATGGCGCTGTAAAAGGCGCCATTTTCATATTGTAGACAACGTAGACTTTGtt                                                                                                            >  1:417226/1‑149 (MQ=255)                          aaaaACCATCCGCGCGGGTATCGTGAAATGGAGAAGGCAGAAGCGAAAAAAGAGAGGGAAGAAGGGATATAAT‑TTCTTTTGAACTTTAAGCTGAAAATGGCGCTGTAAAAGGCGCCATTTTCATATTGTAGACAACGTAGGCTTTGTTc                                                                                                           <  2:254153/149‑1 (MQ=38)                                     gcgcTGGTATCGTGAAATCGAGAAGGCAGAAGCGAAAAAAGGGAGTGAAGAAGGGATATAAT‑CTCTTTTGAACTTTAAGCTG‑AAATGGCGCTGTAAAAGGCGCCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCgaagccg                                                                                               >  2:101961/1‑143 (MQ=255)                                     gcgcTGGTATCGTGAAATCGAGAAGGCAGAAGCGAAAAAAGAGAGTGAAGAAGGGATATAAT‑CTCTTTTGAACTTTAAGCTGAAAATGGCGCTGTAAAAGGCGCCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATgc                                                                                                >  1:600741/1‑149 (MQ=255)                                             aacgaaaaaTCGAGAAGGCAGAAGCGAAAAAAGAGAGTGAAGAAGGGGTATAAT‑CTCTTTTGAACTTTAAGCTGAAAATGGCGCTGTAAAAGGCGCCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGaa                                                                                        <  2:572949/143‑1 (MQ=255)                                                gTGAAGTCGAGAAGGCAGAAGCGAAAAAAGAGAGTGAAGAAGGGATATAAT‑CTCTTTTGAACTTTAAGCTGAAAATGGCGCTGTAAAAGGCGCCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGc                                                                                     >  2:906554/1‑149 (MQ=255)                                                 tGAAATCGAGAAGGCAGAAGCGAAAAAAGAGAGTGAAGAAGGGATATAAT‑CTCTTTTGAACTTTAAGCTGAAAATGGCGCTGTAAAAGGCGCCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGcc                                                                                    >  1:607565/1‑149 (MQ=255)                                                 tGAAATCGAGAAGGCAGAAGCGAAAAAAGAGAGTGAAGAAGGGATATAAT‑CTCTTTTGAACTTTAAGCTGAAAATGGCGCTGTAAAAGGCGCCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGcc                                                                                    >  1:221095/1‑149 (MQ=255)                                                      tCGAGAAGGCAGAAGCGAAAAAAGAGAGTGAAGAAGGGATATAAT‑CTCTTTTGAACTTTAAGCTGAAAATGGCGCTGTAAAAGGCGCCATTTTCCTATTGTAGCCAACTTATGCTTTGTTCATGACGGATGCGGCCGGAAGACCTTaac                                                                               >  1:923597/1‑147 (MQ=255)                                                         agaAGGCAGAAGCGAAAAAAGAGAGTGAAGAAGGGATATAAT‑CTCTTTTGAACTTTAAGCTGAAAATGGCGCTGTAAAAGGCGCCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCgg                                                                            >  1:186672/1‑149 (MQ=255)                                                           aaGGCAGAAGCGAAAAAAGAGAGTGAAGAAGGGATATAAT‑CTCTTTTGAACTTTAAGCTGAAAATGGCGCTGTAAAAGGCGCCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCa                                                                          <  1:211706/149‑1 (MQ=255)                                                              gCAGAAGCGAAAAAAGAGAGTGAAGAAGGGATATAAT‑CTCTTTTGAACTTTAAGCTGAAAATGGCGCTGTAAAAGGCGCCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGa                                                                       <  2:112711/149‑1 (MQ=255)                                                                 gAAGCGAAAAAAGAGAGTGAAGAAGGGATATAAT‑CTCTTTTGAACTTTAAGCTGAAAATGGCGCTGTAAAAGGCGCCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGaaaa                                                                    >  1:399205/1‑149 (MQ=255)                                                                  aaGCGAAAAAAGAGAGTGAAGAAGGGATATAAT‑CTCTTTTGAACTTTAAGCTGAAAATGGCGCTGTAAAAGGCGCCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGcc                                                                                                      >  2:784149/1‑114 (MQ=255)                                                                  aaGCGAAAAAAGAGAGTGAAGAAGGGATATAAT‑CTCTTTTGAACTTTAAGCTGAAAATGGCGCTGTAAAAGGCGCCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGcc                                                                                                      <  1:784149/114‑1 (MQ=255)                                                                      gAAAAAAGAGAGTGAAGAAGGGATATAAT‑CTCTTTTGAACTTTAAGCTGAAAATGGCGCTGTAAAAGGCGCCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCtt                                                               >  1:335201/1‑149 (MQ=255)                                                                       aaaaaaGAGAGTGAAGAATGGATATAAT‑CTCTTTTGAACTTTAAGCTGAAAATGGCGTTGTAAAAGGCGCCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTc                                                              <  1:36442/149‑1 (MQ=255)                                                                       aaaaaaGAGAGTGAAGAAGTGATCTAAT‑CTCTTTTGAACTTTAAGCTCAAAATGGCGCTGTAAAAGGCGCCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTc                                                              <  1:349069/149‑1 (MQ=255)                                                                        aaaaaGAGAGTGAAGAAGGGATATAAT‑CTTTTTTGAACTTTAAGCTGATATTGGCTTTGTAAAAGGCGCCATTTTCATATTGTAGATAACGTAGGTTTTGTTCATGCCGGAGGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCa                                                             <  1:170167/149‑1 (MQ=18)                                                                               gagTGAAGAAGGGATATAAT‑CTCTTTTGAACTTTAAGCTGAAAATGGCGCTGTAAAAGGCGCCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCaa                                                      <  2:186672/149‑1 (MQ=255)                                                                                   gaagaaGGGATATATT‑CTCTTTTGACTTTTAAGCTGAAAATGGCGTTGTAAAAGGCGCCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGa                                                  <  1:643147/149‑1 (MQ=255)                                                                                     agaagGGATATAAT‑CTCTTTTGAACTTTAAGCTGAAAATGGCGCTGTAAAAGGCGCCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCTGCATGAAAACCCTTCAAATCCAATAGAtt                                                >  1:16588/1‑149 (MQ=255)                                                                                         gggATATAAT‑CTCTTTTGAACTTTAAGCTGAAAATGGCGCTGTAAAAGGCGCCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAATCCCTTCAAATCCAATAGATTGCAg                                            <  1:906554/149‑1 (MQ=255)                                                                                          ggATATAAT‑CTCTTTTGAACTTTAAGCTGAAAATGGCGCTGTAAAAGGCGCCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAAACCTTCAAATCCAGTACATTGCAGt                                           >  2:288219/1‑149 (MQ=255)                                                                                            atatAAT‑CTCTTTTGAACTTTAAGCTGAAAATGGCGCTGTAAAAGGCGCCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATTCGGCATGAAAACCTTTCAAATCCAATAGATTGCAGTGa                                         >  1:179998/1‑149 (MQ=255)                                                                                              ataAG‑CTCTTTTGAACTTTAAGCAGAAAATGGCGCTGTAAAAGGCTCCATTTTCATATTGTACACAACGTAGGCTTTGCTCATGCCGGATGTGGTGTGTACGCCCTATCCGGCATGAAATCCCTTCAAATCCAATAGATTGCAGTGAAc                                       <  1:881922/149‑1 (MQ=17)                                                                                                aaT‑CTCTTTTGAACTTTAAGCTGAAAATGGTGCTGTAAAAGGCGCCATTTTCATATTGTAGACAACGTAGGCTTTTTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACgt                                     <  1:659241/149‑1 (MQ=255)                                                                                                 aT‑CTCTTTTGAACTTTAAGCTGAAAATGGCGCTGTAAAAGGCGCCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGCACgtg                                    >  1:207259/1‑149 (MQ=255)                                                                                                     tctTTTGAACTTTAAGCTGAAAATGGCGCTGTAAAAGGCGCCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAg                                 <  2:303915/149‑1 (MQ=255)                                                                                                     tctTTTGAACTTTAAGCTGAAAATGGCGCTGTAAAAGGCGCCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAg                                 >  1:483037/1‑149 (MQ=255)                                                                                                       ttttGAACTTTAAGCTGAAAATGGCGCTGTAAAAGGCGCCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAAACCAATAGATTACAGTCAAACTGTAgaa                               >  1:549021/1‑147 (MQ=14)                                                                                                              cTTTAAGCTGAAAATGGCGCGGTAAAAGGCGCCATTTTAATATTGTAGACAACGTAGGCTTTGTTAATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAAAGTGGAGGCCTGATaa                        >  2:715424/1‑149 (MQ=14)                                                                                                               tttAAGCTGAAAATGGCGCTGTAAAAGGCGCCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGACTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAg                       >  1:712311/1‑149 (MQ=255)                                                                                                               tttAAGCTGAAAATGGCGCTGTAAAAGGCGCCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGACGTGAAAGCCTTATACGGCATCAAAACCCTTCAAATCCACCAGATTGCAGTAAACGTGTAGCGCTAATAAg                       >  2:334413/1‑149 (MQ=14)                                                                                                               tttAAGCTGAAAATGGCGCTGTAAAAGGAGCCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAg                       <  2:350058/149‑1 (MQ=255)                                                                                                                ttAAGCTTTAAATGGCGCTGTAAAAGGCGCCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGc                      <  1:347191/149‑1 (MQ=21)                                                                                                                ttAAGCTGAAAATGGCGGTGGAAAAGGCGCCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGc                      <  2:151781/149‑1 (MQ=255)                                                                                                                   aGCTGAAAATGGCGCTGTAAAAGGCGCCATTTTCATATTGTAGTCAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACCTGTAGGCCTCACAAGCGTa                   <  2:924269/149‑1 (MQ=255)                                                                                                                     cTGAAAATGGCGCTGTAAAAGGCGCCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGCACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATCGATTGCAGTGAACGTGTAGGCCTGATAAGCGtgcc                 >  2:68726/1‑146 (MQ=255)                                                                                                                     cTGAAAATGGCGCTGTAAAAGGCGCCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAgc                 <  2:399205/149‑1 (MQ=35)                                                                                                                      tGAAAATGGCGCTGTAAAAGGCGCCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAgcg                >  1:623103/1‑149 (MQ=35)                                                                                                                       gAAACTGGCGCGGTAAAAGGCGCTATTTTCATATTGTAGCCATCGTAGGCTTTGTTCATGCCGGATGAGACCTGGACACCTTATCCTTCATGAAAACCCTTCAAATCCAATAGATGGCAGTGAACGTTTAGGCCTGATAAGCGTAgcgc               <  2:260577/149‑1 (MQ=11)                                                                                                                          aaTGGCGCTGTAAAAGGCGCCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATc            >  1:705244/1‑149 (MQ=32)                                                                                                                                gcTGTAAAAGGCGCCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCaa      >  2:565766/1‑149 (MQ=32)                                                                                                                                   gTAAAAGGCGCCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGt   >  1:338232/1‑149 (MQ=32)                                                                                                                                    tAAAAGGCGCCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCa                                             >  1:378278/1‑106 (MQ=33)                                                                                                                                    tAAAAGGCGCCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCa                                             <  2:378278/106‑1 (MQ=33)                                                                                                                                    tAAAAGGCGCCATTTTCATACTGTAGANAACGNAGGCTTTGTGCATGCCGGATGCGGCGTGCACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGtt  <  1:68726/149‑1 (MQ=12)                                                                                                                                                      |                                                                                                                                   GAAGGTAAGTCGTCGCTGGGCGAAGAAACACCATCCGCGCTGGTATCGTGAAATCGAGAAGGCAGAAGCGAAAAAAGAGAGTGAAGAAGGGATATAAT‑CTCTTTTGAACTTTAAGCTGAAAATGGCGCTGTAAAAGGCGCCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTT  >  NC_000913_3_pae_tpiA/1551895‑1552173

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.