| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913_3_pae_tpiA | 1,544,022 | 1 bp→AA | coding (39/1389 nt) | narU ← | nitrate/nitrite transporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913_3_pae_tpiA | 1,544,021 | 1 | . | A | 82.3% | 159.1 / 30.7 | 62 | coding (40/1389 nt) | narU | nitrate/nitrite transporter |
| Reads supporting (aligned to +/- strand): ref base . (8/3); new base A (31/20); total (39/23) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.16e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| * | NC_000913_3_pae_tpiA | 1,544,022 | 0 | C | A | 96.8% | 176.0 / NA | 62 | L13F (TTG→TTT) | narU | nitrate/nitrite transporter |
| Reads supporting (aligned to +/- strand): ref base C (1/1); new base A (38/22); total (39/23) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
TTGAGATTAACGGTAACTGCGCTAAATAGCATCCAGACACAGAAGGCAAGAAGTAGACAACTGACTGATATCCAGAGATTTCTTCGAGCAATATGTTTTCCTTTATTTTCCCAGAAGGCCGGATTTTCTGGTTTCCAGTCG‑C‑G‑C‑A‑AAAGATAACGACTATTTTTCTCATTTTGCAGTGCCATATTGTTCCTCACATGCACACATTGGTAATGAAAAAAAGACAAAACACGAGGTAAGGCGCAATAGCCAGTTATTAGAATTAAGGATGAATTGGGTGAAGTGCTGATTGA > NC_000913_3_pae_tpiA/1543879‑1544168 ||| ttGAGATTAACGGTAACTGCGCTAAATAGCATCCAGACACAGAAGGCAAGAAGTAGACAACTGACTGATATCCAGAGATTTCTTCGAGCAATATGTTTTCCTTTATTTTCCCAGAAGGCCGGATTTTCTGGTTTCAAGTCT‑C‑G‑C‑a‑aaaa > 1:768205/1‑148 (MQ=255) agaTTAACGGTAACTGCGCTAAATAGCATCCAGGCACAGAAGGCAAGAAGTAGACAACTGACTGATATCCAGAGATTTCTTCGAGCAATATGTTTTCCTTTATTTTCCCAGAAGGCCGGATTTTCTGGTTTCCAGTCG‑C‑G‑A‑a‑aaaagat > 2:543823/1‑145 (MQ=255) agaTTAACGGTAACTGCGCTAAATAGCATCCAGACACAGAAGGCAAGAAGTAGACAACTGACTGATATCCAGAGATTTCTTCGAGCAATATGTTTTCCTTTATTTTCCCAGAAGGCCGGATTTTCTGGTTTCCAGTCG‑C‑G‑A‑a‑aaaagat > 2:564796/1‑145 (MQ=255) ggTAACTGCGCTAAATAGACTACAGACACAGAAGGCAACAACTCTGGTGCTGAACCATCTCAACTGAAGTTGTCTAGCAATATGTTTTCCTTTATTTTCCCAGAAGGCCGGATTTTATGGTTTCCAGTCG‑CAA‑A‑A‑AAAGATAACGACTa > 2:220363/1‑149 (MQ=255) cTGCGCTAAATAGCATCCAGACACAGAAGGCAAGAAGTAGACAACTGACTGATATCCAGAGATTTCTTCGAGCAATATGTTTTCCTTTATTTTCCCAGAAGGCCGGATTTTCTGGTTTCCAGTCG‑C‑GAA‑A‑AAAGATAACGACTAttttt < 2:387942/149‑1 (MQ=255) gcgcTAAATAGCATCCAGACACAGAAGGCAAGAAGTAGACAACTGACTGATATCCAGAGATTTCTTCGAGCAATATGTTTTCCTTTATTTTCCCAGAAGGCCGGATTTTCTGGTTTCCAGTCG‑C‑GAA‑A‑AAAGATAACGACTAtttt < 2:14959/146‑1 (MQ=255) gcgcTAAATAGCATCCAGACACAGAAGGCAAGAAGTAGACAACTGACTGATATCCAGAGATTTCTTCGAGCAATATGTTTTCCTTTATTTTCCCAGAAGGCCGGATTTTCTGGTTTCCAGTCG‑C‑GAA‑A‑AAAGATAACGACTAtttt > 1:14959/1‑146 (MQ=255) gcTAAATAGCATCCAGACACAGAAGGCAAGAAGTAGACAACTGACTGATATCCAGAGATTTCTTCGAGCAATATGTTTTCATTTATTTTACAAGAAGGCCGGATTTTCTGGTTTCGAGTCA‑C‑GAA‑A‑AAAGATAAAGACTAtttttacta > 1:397820/1‑145 (MQ=255) tAGCATCCAGACACAGAAGGCAAGAAGGAGACAACTGACTGATATCCAGAGATTTCTTCGAGCAATATGTTTTCCTTTATTTTCCCAGAAGGCCGGATTTTCTGGTTTCCAGTCG‑C‑GAA‑A‑AAAGATAACGACTATTTTTCTCATTTTGc > 2:552499/1‑149 (MQ=255) aGCATCCAGACACAGAAGGCAAGAAGTAGACAACTGACTGATATCCAGAGATTTCTTCGAGCAATATGTTTTCCTTTATTTTCCCAGAAGGCCGGATTTTCTGGTTTCCAGTCG‑C‑GAA‑A‑AAAGATAACGACTATTTTTCTCATTTTGCa < 1:663775/149‑1 (MQ=255) ccAGACACAGAAGGCAAGAAGTAGACAACTGACTGATATCCAGAGATTTCTTCGAGCAATATGTTTTCCTTTATTTTCCCAGAAGGCCGGATTTTCTGGTTTCCAGTCT‑C‑GAA‑A‑AAAGATAACGACTATTTTTCTAATTTTGCAGGGcc > 2:70446/1‑149 (MQ=255) acaGAAGGCAAGAAGTAGACAACTGACTGATATCCAGAGATTTCTTCGAGCAATATGTTTTCCTTTATTTTCCCAGAAGGCCGGATTTTCTGGTTTCCAGTCG‑C‑GAA‑A‑AAAGATAACGACTATTTTTCTCATTTTGCAGGGCCATATTg > 2:829908/1‑149 (MQ=255) aGAAGGCAAGAAGTAGACAACTGACTGATATCCAGAGATTTCTTCGAGCAATATGTTTTCCTTTATTTTCCCAGAAGGCCGGATTTTCTGGTTTCCAGTCG‑C‑GAA‑A‑AAAGATAACGACTATTTTTCTCATTTTGCAGTGCCATATTGtt > 2:738779/1‑149 (MQ=255) aGAAGGCAAGAAGTAGACAACTGACTGATATCCAGAGATTTCTTCGAGCAATATGTTTTCCTTTATTTTCCCAGAAGGCCGGATTTTATGGTTTCCAGTCG‑C‑G‑AAA‑AAAGATAACGACTATTTTTCTTATTTTGCAGTTCCATATTGtt > 2:1011560/1‑149 (MQ=255) gAAGGCAAGAAGTAGACAACTGACTGATATCCAGAGATTTCTTCGAGCAATATGTTTTCCTTTATTTTCCCAGAAGGCCGGATTTTCTGGTTTCCAGTCG‑C‑GAA‑A‑AAAGATAACGACTATTTTTCTCATTTTGCAGTGCCATATTGTTc < 1:543823/149‑1 (MQ=255) gAAGGCAAGAAGTAGACAACTGACTGATATCCAGAGATTTCTTCGAGCAATATGTTTTCCTTTATTTTCCCAGAACGCCGGATTTTCTGGTTTCCAGTCG‑C‑GAA‑A‑AAAGATAACGTCTATTTTTCTCATTTTGCAGTGCCATATTGTTc < 2:990336/149‑1 (MQ=255) caaGGCAAGAAGTAGACAACTGACTGATATCCAGAGATTTCTTCGAGCAATATGTTTTCCTTTATTTTCCCAGAAGGCCGGATTTTCTGGTTTCCACTCG‑A‑GAC‑A‑AAAGATAACGACTATTTTTCTCATTTTGCAGTGCCATATTGTTc < 2:527416/148‑1 (MQ=255) gCAAGGAGTAGACAACTGACCTATATCCAGAGACTTCTGCGAGCAATATGTTTTCCTTTATTTGCCCAGAAGGCCGGATTTGCTGTTTAACAGTAG‑C‑GAA‑A‑AAAGATAACGACTATTTTTCTCATTTTGCAGTGCCATATTGTTCCTca < 2:56790/149‑1 (MQ=255) gCAAGAAGTAGACAACTGACTGATATCCAGAGATTTCTTCGAGCAATATGTTTTCCTTTATTTTCCCAGAAGGCCGGATTTTCTGGTTTCCAGTCG‑C‑GAA‑A‑AAAGATCACGACTATTTTTGCCAGCTTGCAGTGCCATATTGTTCCTca > 1:661146/1‑149 (MQ=255) cAAGAAGTAGACCACTGACTGATATCCAGAGATTTCTACGAGCAATATGTTTTCCTTTATTTTCCCAGAAGGCCGGATTTTCTGGTTTCCAGTCG‑C‑GAA‑A‑AAAGATAACGACTATTTTTCTAATTTTCCAGTGCCATATTGTTCCTcac > 2:616478/1‑149 (MQ=255) aagaagTAGACAACTGACTGATATCCAGAGATTTCTTCGAGCAATATGTTTTCCTTTATTTTCCCAGAAGGCCGGGTTTTCTGGTTTCCAGTCG‑C‑GAA‑A‑AAAGATAACGACTATTTTTCTCATTTTGCAGTACCATATTGTTCCTaaca > 2:897871/1‑149 (MQ=255) gaagTAGACAACTGACTGATATCCAGAGATTTCTTCGAGCAATATGTTTTCCTTTATTTTCCCAGAAGGCGGGATTTTCTGGTTTCCCGTCG‑C‑GAA‑A‑AAAGATAACGACTATTTTTATCATTTTGCAGTGCCATATTGTTCCTCACATg > 2:143760/1‑149 (MQ=255) agaaGACAACTAACTGATATCCAGAGATTCCTTCGAGCAATATGTTTTCCTTTATTTTCCCAGAAGGCCGGATTTTCTGGTTTCCAGTCG‑C‑GAA‑A‑AAAGATAACGACTATTTTTCTCATTTTGCAGTGCCATATTGTTCCTCACATGca < 1:865086/146‑1 (MQ=255) aataaaCAACTAACTGATATCCAAAAATTTCTTCAAGCAAAAACATACACGTTATTTTCCCAGAAGGCCGGATTTTCTGGTTGCCAGTCG‑C‑GAA‑A‑AAAGATAACGACTATTTTTCTCATTTTGCAGTGCCATATTGTTCCTCACATGca < 1:338250/144‑1 (MQ=255) tAGACAACTGACTGATATCCAGAGATTTCTTCGAGCAATATGTTTTCCTTTATTTTCCCAGAAGGCCGGATTTTCTGGTTTCCAGTCG‑C‑GAA‑A‑AAAGATAACGACTATTTTTCTCATTTTGCAGTGCCATATTGTTCCTCACATGcaca > 1:222555/1‑149 (MQ=255) aCAACTGACTGATATCCAGAGATTTCTTCGAGCAATATGTTTTCCTTTATTTTCCCAGAAGGCCGGATTTTCTGGTTTCCAGTCG‑C‑GAA‑A‑AAAGATAACGACTATTTTTCTCATTTTGCAGTGCCATATTGTTCCTCACATGCACACAt > 2:7844/1‑149 (MQ=255) ctgactgaTATCCAGAGATTTCTTCGAGCAATATGTTTTCCTTTATTTTCCCAGAAGGCCGGATTTTCTGGTTTCCAGTCG‑C‑GAA‑A‑AAAGATAACGACTATTTTTCTCATTTTGCAGTGCCATATTGTTCCTCACATGCACACATTGGt < 1:738779/149‑1 (MQ=255) ctgactgaTATCCAGAGATTTCTTCGAGCAATATGTTTTCCTTTATTTTCCCAGAAGGCCGGATTTTCTGGTTTCCAGTCG‑C‑GAA‑A‑AAAGATAACGACTATTTTTCTCATTTTGCAGTGCCATATTGTTCCTCACATGCACACATTGGt > 1:280109/1‑149 (MQ=255) tgaTATCCAGAGATTTCTTCGAGCAATATGTTTTCCTTTATTTTCCCAGAAGGCCGGATTTTCTGGTTTCCAGTCG‑C‑GAA‑A‑AAAGATAACGACTATTTTTCTCATTTTGCAGTGCCATATTGTTCCTCACATGCACACATTGGTAATGa > 1:292459/1‑149 (MQ=255) atatCCAGAGATTTCTTCGAGCAATATGTTTTCCTTTATTTTCCCAGAAGGCGAGAGTTTCTGGTTTCCAGTCG‑C‑GAA‑A‑AAAGATAACGACTATTTTTCTCATTTTGCAGTGCCATATTGTTCCTCACATGCACACATTTGTAATGaaa > 1:464522/1‑149 (MQ=255) atatCCAGAGATTTCTTCGAGCAATATGTTTTCCTTTATTTTCCCAGAAGGCCGGATTTTCTGGTTTCCAGTCG‑C‑GAA‑A‑AAAGATAACGACTATTTTTCTCATTTTGCAGTGCCATATTGTTCCTCACATGCACACATTGGTGAGGaaa > 2:397639/1‑149 (MQ=255) ccAGAGATTTCTTCGAGCAATATGTTTTCCTTTATTTTCCCAGAAGGCCGGATTTTCTGGTTTCCAGTCG‑C‑GAA‑A‑AAAGATAACGACTATTTTTCTCATTTTGCAGTGCCATATTGTTCCTCACATGCACCCATTGGTAATGaaaaaaa > 2:757084/1‑149 (MQ=255) caagagATTTCTTCGAGCAATATGTTTTCCTTTATTTTCCCAGAAGGCCGGTTTTTCTGGTTTCCAGTCG‑C‑GAA‑A‑AAAGATAACGACTATTTTTCTCATTTTGCAGTGCCATATTGTTCCTCACATGCACACATTGGTAATGaaaaaaa < 1:994268/147‑1 (MQ=255) cAGAGATTTCTTCGAGCAATATGTTTTCCTTTCTTTTCACAGCAATCCCGATTTTCTGGTTTCCAGTAG‑C‑GAA‑A‑AAAGATAACGACTATTTTTCTCCTTTTGCAGTGCCATATTGTTCCTCACATTCACACATTGTTAATGAAAAAAAg > 2:174279/1‑149 (MQ=255) agagATTTCTTCGAGCAATATGTTTTCCTTTATTTTCCCAGAAGGCCGGATTTTCTGGTTTCCAGTCG‑C‑GAA‑A‑AAAGATAACGTCTATTTTTCTCATTTTTCGGTGCCATATTGTTTCTAACATGCACAAATTGCTATTGAAAATAAGa > 1:10544/1‑149 (MQ=255) gagaTTTCTGCGAGCAATATGTTTTCCTTTATTTTCCCAGAAGGCCGGATTTTCTGGTTTCCAGTCG‑C‑GAA‑A‑AAAGATAACGACTATTTTTCTCATTTTGCAGTGCCATATTGTTCCTCACATGCACACATTGGTAATGAAAAAAAGAc > 2:10683/1‑149 (MQ=255) ttttcGAGCAATATGTTTTCCTTTATTTTCCCAGAAGGCCGGATGTTCTGGTTTCCAGTCG‑C‑GAA‑A‑AAAGATAACGACTATTTTTCTCATTTTGCAGTGCCATATTGTTCCTCACATGCACACATTGGTAATGAAAAAAAGACAAAaca < 1:788984/147‑1 (MQ=255) tcttcGAGCAATATGTTTTCCTTTATTTTCCCAGAAGGCCGGATTTTCTGGTTTCCAGTCG‑C‑GAA‑A‑AAAGATAACGACTATTTTTCTCATTTTGCAGTGCCATATAGTTCCTCACATGCACACATTGGTAATGAAAAAAAGACaaaaaa > 1:648104/1‑147 (MQ=255) cttcGAGCAATTTGTTTTCCTTTATTTTCCCAGAAGGCCGGATTTTCTTGTTTCCAGTCG‑C‑GAA‑A‑AAAGATAACGACTATTTTTCTCATTTTGCAGTGCCATATTGTTCCTCACATGCACACATTGGTAATGAAAAAAAGACAAAacac < 1:1004694/149‑1 (MQ=255) ttcGAGGAATAGGTTTTCCTTTATGTACCCAGAAGGCCGGATTTTCTGGTTTCCAGTCG‑C‑G‑AAA‑AAAGATAACGACTATTTTTCTCATTTTGCAGTGCCATATTGTTCCTCACATGCACACATTGGTAATGAAAAAAAGACAAAACACg < 2:806674/149‑1 (MQ=255) ttcGAGCAATATGTTTTCCTTTATTTTCCCAGAAGGCCGGATTTTCTGGTTTCCAGTTG‑C‑GAA‑A‑AAAGATAACGACTATTTTTTTTTGGTTGCAGTGTCATATTGTTTGTCACATGTACAGTTTGGTAATGAAAATATAACAAAACACg > 1:502199/1‑149 (MQ=255) ttcGAGCAATATGTTTTCCTTTATTTTCCCAGAAGGCCGGATTTTCTGGTTTCCAGCGG‑C‑GAA‑A‑AAAGATAACGACTCTTTTTCTCATTTTGCAGTGCCATATTGTTCCTCACATGCAAACATTGGTAATGAAAAAAAGACAAAACACg > 1:379336/1‑149 (MQ=255) tggAGCAATATTGTTTCCTTTATTGTCCCAGAAGGCCGGATTTTCTGGTTTCCAGTCG‑C‑G‑A‑ATAAAGATAACGACTATTTTTCTCATTTTGCAGTGCCATATTGTTCATCACATGCACACATTGGTAATGAAAAAAAGACAAAACACGa < 2:927300/147‑1 (MQ=255) gCAATATGTTTTCCTTTATTTTCCCAGAAGGCCGGATTTTCTGGTTTCCAGTCG‑C‑G‑AAA‑AAAGATAACGACTATTTTTCTCATTTTGCAGTGCCATATTGTTCCTCAAATGCACACATTGGTAATGAAAAAAAGACAAAACACGAGGTa > 1:741260/1‑149 (MQ=255) aaTATTTTTTCCTTTATTTGCCCAGAAGGCCGGATTTTCTGGTTTCCAGTCG‑C‑GAA‑A‑AAAGATAACGACTATTTTTCTCATTTTGCAGTGCCATATTGTTCCTCACATGCACACATTGGTAATGAAAAAAAGACAAAACACGAGGTAAg < 1:650959/149‑1 (MQ=255) atGTTTTCCTTTATTTTCCCAGAAGGCCGGATTTTCTGGTTTCCAGTCG‑C‑GAA‑A‑AAAGATAACGACTATTTTTCTCATTTTGCAGTGCCATATTGTTCCTCACATGCACACATTGGTAATGAAAAAAAGACAAAACACGAGGTAAGgcg < 1:10683/149‑1 (MQ=255) ttttCCTTTATTTTCCCAGAAGGCCGGATTTTCTGGTTTCCAGTCG‑C‑GAA‑A‑AAAGATAACGACTATTTTTCTCATTTTGCAGTGCCATATTGTTCCTCACATGCACACATTGGTAATGAAAAAAAGACAAAACACGAGGTAAGGCGCaa > 2:62756/1‑149 (MQ=255) ttttCCTTGATTTTCCCAGAAGGCCGGATTTTCTGGTTTCCAGTCG‑C‑GAA‑A‑AAAGATAACGACTATTTTTCTCATTTTGCAGTGCCATATTGTTCCTCACATGCACACATTGGTAATGAAAAAAAGACAAAACACGAGGTAAGGCGCaa < 2:940655/149‑1 (MQ=255) tttaCCTTTATTTTCCCAGAATTCCGGATTTTTTGGTTTCCAATCGTT‑A‑A‑A‑AAAGATAATGACTTTTTTTTTCTTTTTGCAGTGCCACATTGTCCCTCACATGCACACATTGGTAATGAAAAAAAGACAAAACACGAGGTAAGGCGCaa < 1:295882/149‑1 (MQ=255) tCCTTTATTTTCCCAGAAGGCCGGATTTTCTGGTTTCCAGTCG‑C‑GAA‑A‑AAAGATAACGACTATTTTTCTCATTTTGCAGTGCCATATTGTTCCTCACATGCACACATTGATAATGAACAAAAGACAAAACAAGGGATAAGGCGCAagag > 2:282707/1‑149 (MQ=255) tttATTTTCCCAGAAGGCCGGATTTTCTGGTTTCCAGTCG‑C‑GAA‑A‑AAAGATAACGACTATTTTTCTCATTTTGCAGTGCCATATTGTTCCTCACATGCACACATTGGTACTGAAAAAAAGACAAAACACGAGGCAAGGCGCAATAGCCa > 2:543496/1‑149 (MQ=255) ttCCCAGAAGGCCGGATTTTCTGGTTTCCAGTCG‑C‑GAA‑A‑AAAGATAACGACTATTTTTCTCATTTTGCAGTGCCATATTGTTCCTCACATGCACACATTGGTAATGAAAAAAAGACAAAACACGAGGTAAGGCGCAATAGCCAGttatt < 1:62756/149‑1 (MQ=255) ccAGAAGGCCGGATTTTCTGGTTTCCAGTCG‑C‑GAA‑A‑AAAGATAACGACTATTTTTCTCATTTTGCAGTGCCATATTGTTCCTCACATGCACACATTGGTAATGAAAAAAAGACAAAACACGAGGTAAGGCGCAATAGCCAGTTATTAGa > 1:627793/1‑149 (MQ=255) ccAGAAGGCCGGATTTTCTGGTTTCCAGTCG‑C‑G‑AAA‑AAAGATAACGACTATTTTTCTCATTTTGCAGTGCCATATTGTTCCTCACATGCACACATTGGTAATGAAAAAAAGAAAAAACACGAGGTAAGGCGCAATAGCCAGTTATTAGa > 1:627852/1‑149 (MQ=255) aGGCCGGATTTTCTGGTACCCAGTCG‑C‑GAA‑A‑AAAGATAACGACTATTTTTCTCATTTTGCAGTGCCATATTGTTCCTCACATGCACACATTGGTAATGAAAAAAAGACAAAACACGAGGTAAGGCGCAATAGCCAGTTATTAGAATTaa < 2:685851/149‑1 (MQ=255) cGGATTTTCTGGTTTCCAGTCG‑C‑GAA‑A‑AAAGATAAGAACTATTTTTCTCATTTTACAGTGCCATATTGTTCATCACATGCACACATTGGTAATGAAAAAAAGACAAAACACGGTGGAAGGCGCAATAGCAAGTTACTAAAATTAAGGaa > 2:687505/1‑148 (MQ=255) cGGATTTTCTGGTTTCCAGTCG‑C‑GAA‑A‑AAAGATAACGACTATTTTTCTCATTTTGCAGTGCCATATTGTTCCTCACATGCACACATTGGTAATGAAAAAAAGCCAAAACACGAGGTAAGACGCAAAAGCCAGTTATTAGAATTAAGAAt > 2:451201/1‑149 (MQ=255) ggATTTTCTGGTTTCCAGTCG‑C‑GAA‑A‑AAAGATAACGACTATTTTTCTCATTTTGCAGTGCCATATTGTTCCTCACATGCAAACATTGGTAATGAAAAAAAGACAAAACACGAGGTAAGGCGCAATAGCCAGTTATTAGAATTAAGGATg < 1:564796/149‑1 (MQ=255) ggATTTTCTGGTTTCCAGTAG‑C‑T‑AAA‑AAAGATAACGACTATTTTTCTCATTTTGCAGTGCCATATTGTTCCTCACATGCACACATTGGTAATGAAAAAAAGACAACACACGCGGTAAGGCGCAAAAGCCAGTTATTAGAATTAAGGAtc > 2:739334/1‑148 (MQ=255) ggTTTCCAGTCG‑C‑GAA‑A‑AAAGATAACGACTATTTTTCTCATTTTGCCGTGCCATATTGTTCCTCACACGCACACATTGGTAATGAAAAAAAGACAAAACACGAGGTAAGGCGCAGTAGCCAGTCATTAGGATTAAGGATGAATTGGGTg > 1:944179/1‑149 (MQ=255) ttCCAGTCG‑C‑GAA‑A‑AAAGATAACGACTATTTTTCTCATTTTGCAGTGCCATATTGTTCCTCACATGCACACATTGGTAATGAAAAAAAGACAAAACACGAGGTAAGGCGCAATAGCCAGTTATTAGAATTAAGGATGAATTGGGTGAAg < 1:991975/149‑1 (MQ=255) tCCAGTCG‑C‑GAA‑A‑AAAGATAACGACTATTTTTCTCATTTTGCAGTGCCATATTGTTCCTCACATGCACACATTGGTAATGAAAAAAAGACAAAACACGAGGTAAGGCGCAATAGCCAGTTATTAGAATTAAGGATGAATTGGGTGAAGt > 2:842909/1‑149 (MQ=255) tcgcgaaa‑aaaGATAACGACTATTTTTCTCATTTTGCAGTGCCATATTGTTCCTCACATGCACACATTGGTAATGAAAAAAAGACAAAACACGAGGTAAGGCGCAATAGCCAGTTATTAGAATTAAGGATGAATTGGGTGAAGGGCTGa > 1:492264/8‑149 (MQ=255) gaaa‑aaaGATAACGACTATTTTTCTCATTTTGCAGTGCCATATTGTTCCTCACATGCACACATTGGTAATGAAAAAAAGACAAAACACGAGGTAAGGCGCAATAGCCAGTTATTAGAATTAAGGATGAATTGGGTGAAGTGCTGATTGa < 2:292459/146‑1 (MQ=255) ||| TTGAGATTAACGGTAACTGCGCTAAATAGCATCCAGACACAGAAGGCAAGAAGTAGACAACTGACTGATATCCAGAGATTTCTTCGAGCAATATGTTTTCCTTTATTTTCCCAGAAGGCCGGATTTTCTGGTTTCCAGTCG‑C‑G‑C‑A‑AAAGATAACGACTATTTTTCTCATTTTGCAGTGCCATATTGTTCCTCACATGCACACATTGGTAATGAAAAAAAGACAAAACACGAGGTAAGGCGCAATAGCCAGTTATTAGAATTAAGGATGAATTGGGTGAAGTGCTGATTGA > NC_000913_3_pae_tpiA/1543879‑1544168 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |