Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_000913_3_vch_tpiA 3423743–3424234 3424558–3424239 6–816 19 [17] [18] 19 [rrfD]–[rrlD] [rrfD],[rrlD]

TTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCT‑CCCACCTA‑TCCTACACATCAAGGCTCAATGTTCAGTGTCAAGCTATAGT  >  NC_000913_3_vch_tpiA/3424516‑3424707
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tttAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCT‑cccccc                                              >  2:841872/1‑149 (MQ=17)
tttAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCT‑CCCAcc                                              >  1:150419/1‑149 (MQ=32)
tttAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCT‑CCCAcc                                              >  1:461340/1‑149 (MQ=32)
        gagcCCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCT‑CCCACCTA‑TCCTac                                     <  1:510216/149‑1 (MQ=17)
           aCCGCCCCAGTCAAACTTCCCCCCAGACTCTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCT‑CCCACCTA‑TCCTAcaca                                  <  1:17341/149‑1 (MQ=12)
            ccGCCCCAGTCAAACTATCCACCAGACGGTGTCCGCAACCCGGATTACGGGTCAACTTTAGAACATCAAATATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGTTGTTTACAC‑GATAAGGCTACCAACCTA‑ACCTACACAt                                 <  2:713274/149‑1 (MQ=1)
                   aGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCT‑CCCACCTA‑TCCTACACATCAAGGCt                          >  1:592569/1‑149 (MQ=32)
                    gTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCT‑CCCACCTA‑TCCTACACATCAAGGCTc                         >  1:676787/1‑149 (MQ=32)
                       aaatgaCCCACCAGATACTGTCCGCAACCCTGGTTACGGGTCAACGTTAAAACATCAAACATGAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCT‑CCCACCTA‑TCCTACACATCAAGTCTGAAt                      <  2:220848/144‑1 (MQ=11)
                       aaaCTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCT‑CCCACCTA‑TCCTACACATCAAGGCTCAAt                      <  1:608702/149‑1 (MQ=32)
                              ccaccaGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCT‑CCCACCTA‑TCCTACACATCAAGGCTCAATGTTCAgt               <  1:648497/149‑1 (MQ=32)
                              ccaccaGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGAGGTATTGCAAGGCCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCG‑CCCACCTA‑TCCTACCCACCAGGGCTCAATGTTCAgt               >  1:489388/1‑149 (MQ=11)
                               caccaGACACTGTCCGCAACCCGGGTTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTGTTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACCCTTCTACGCCT‑CCCACCTA‑TCCTACACATCACGGCTCAATTTTCtgtg              >  2:799886/1‑149 (MQ=11)
                                  gaGACTCTGTGCGCAACCCGGCTTACGGGGCAACGTTAGAACATCAAACATTCACGGGTTGTATTTCAAGGTGGTCTCCATGCAGACTTGTTTTTACA‑TTATACGGCG‑ACCACCGAGATCTACACATCAAGGCTCAATGTTCAGTGTCa           <  2:278322/148‑1 (MQ=2)
                                   aGACACTGTCCGCAACCCGGATTACAGGTAAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCT‑CCCACCTA‑TCCTACACATCAAGGCTCAATGTTCAGTGTCaa          >  2:605997/1‑149 (MQ=17)
                                       acTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCT‑CCCACCTA‑TCCTACACATCAAGGCTCAATGTTCAGTGTCAAGCta      <  2:46310/149‑1 (MQ=32)
                                         tGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCT‑CCCACCTA‑TCCTACACATCAAGGCTCAATGTTCAGTGTCAAGCtata    >  1:99217/1‑149 (MQ=32)
                                          gTCCGTAACCCGTATAACGGGTCAACGTTATAACTTCAAACATTAAAGGGTAGTATTTCAAGGCCGGCTCGATGAAGAGTGGCGTTTATATTTTTAAGCCA‑CCCACGAA‑AACTACACATCAAGGCTCAATGTTCAGTGTCAAGCTATAg   <  2:706658/149‑1 (MQ=2)
                                           tCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCCCACTTCTAAGCCT‑CACACAGA‑TCCTACACATCAAAGCACCATGTTCAGTGTCAAGCTATAGt  >  1:249190/1‑149 (MQ=11)
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TTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCT‑CCCACCTA‑TCCTACACATCAAGGCTCAATGTTCAGTGTCAAGCTATAGT  >  NC_000913_3_vch_tpiA/3424516‑3424707

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑