| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP016816 | = 437880 | 149 (0.120) | 538 (0.360) +ATAT |
145/188 | 3.9 | 72.0% | intergenic (‑184/+238) | JCVSYN2_01985/JCVSYN2_01990 | glycosyl transferase/ABC transporter permease |
| ? | CP016816 | 437881 = | 241 (0.160) | intergenic (‑185/+237) | JCVSYN2_01985/JCVSYN2_01990 | glycosyl transferase/ABC transporter permease | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
Only 100 of 703 total aligned reads displayed.
GAAACTTATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP016816/437754‑437880‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ATATATA‑‑TATATATATATATATATATA‑‑T‑GC‑AAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGATTTTTAA > CP016816/437881‑438007 |||||| AAACTTATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACATATAGAGTTAATG‑‑AT > 1:1538832/1‑128 AACTTATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑ATA > 2:2911375/1‑128 TATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑ATATATA > 1:2510351/1‑128 ATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAATCAATAACCTCCATATTACATATAGAGATAATG‑‑ATATATAT > 2:1381356/1‑128 TTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGTAAATTAATAAAAGCTAAAACCTCCATATTAACTATAGAGTTAATG‑‑ATATATATA > 1:560819/1‑128 TTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCATAGCAAAAACCTCCATATTGCCTATAGAGTTAATG‑‑ATATATATA > 1:756138/1‑128 TTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑ATATAT < 2:1850302/125‑1 TTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCAATATTACCTATAGAGTTAATG‑‑ATATATATA > 1:224365/1‑128 TTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑ATATATATAT > 1:1370099/1‑128 TTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑ATATATATAT > 1:1160106/1‑128 TTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑ATATATATATA‑‑T > 1:2863354/1‑128 tacaaaaaTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACATATAGAGTTAATG‑‑ATATATATATA‑‑TA > 2:3208960/9‑128 TGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGTAAATGAAGCTAAGCAAAAAACTCAATATTACCTATAGAGATAATG‑‑ATATATATATAat > 2:2634336/1‑126 TGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCACCATATTACATATAGAGTAAATA‑‑ATATATATATA‑‑TA > 1:354378/1‑128 AGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑ATATATATATA‑‑TATAT > 1:271043/1‑128 TGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAATCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑ATATATATATA‑‑TATATATA > 2:2135656/1‑128 GTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑ATATATATATA‑‑TATATATAT > 2:925206/1‑128 AAGTTTCATTTTTAATAAATATTAGAAATTAAAATTGTATTTTTAAAATAAATATTTTAGGAAATCAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATC‑‑ATATATATATA‑‑TATATATATAT > 2:1124612/1‑128 gaTTCATTTTTAATAAATATTAGAAATAAAAATAGTATTTTTAAAATAAATATTTTATGAAAAGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑ATATATATATA‑‑TATATATATATAT < 2:851839/126‑1 GTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑ATATATATATA‑‑TATATATATATAT > 1:292074/1‑128 GTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑ATATATATATA‑‑TATATATATATAT > 1:2989655/1‑128 GTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑ATATATATATA‑‑TATATATATATAT > 2:2603070/1‑128 TTTAATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTTTGAAATGAATCAAATCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑ATATATATATA‑‑TATATATATATATA < 1:209314/128‑1 TCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGACGCACAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑ATATATATATA‑‑TATATATATATATATA > 1:3245948/1‑128 TTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑ATATATATATA‑‑TATATATATATATATATAaga > 1:1730351/1‑125 TTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACATCCATATTACCTATAGAGTTAATG‑‑ATATATATATA‑‑TATATATATATATATATATA‑‑T > 2:1524101/1‑128 TAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑ATATATATATA‑‑TATATATATATATATATATgata > 2:1716228/1‑124 AATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATTAATCAAATCAAAAACCTCCATATTAACTATAGAGTTAATG‑‑ATATATATATA‑‑TATATATATATATATATATA‑‑T‑GC‑A < 2:1484782/128‑1 AATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑ATATATATATA‑‑TATATATATATATcattaactcta < 2:1802945/128‑12 tatATATTAGATATAAAAATTTTATTTTTAAAATAAATATTTTATGAAATTAATCAAATAAAAAAACTCCATATTAAATATAGAGTTAATT‑‑ATATATATATA‑‑TATATATATATATATATATA‑‑T‑GC‑AAG < 1:254419/125‑1 AATATTATATATAAAAATTTTATTTTTAATATAAATATTTTAGGAAATGAATCAAAGCAAAAACCTCCATATTCCCTATAGAGTTAATG‑‑ATATATATATA‑‑TATATATATATATATATATA‑‑T‑GC‑AAGCG < 2:399391/128‑1 AATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAATCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑ATATATATATA‑‑AATATATATATATATATATA‑‑A‑GC‑TAGCt > 2:1271025/1‑127 TATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑ATATATATATA‑‑TATATATATATATATATAatcaaccgatca > 1:1062213/1‑116 TTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑ATATATATATA‑‑TATATATATATATATATATA‑‑T‑GC‑AAGCGATCA > 2:1919548/1‑128 atAAATAAAAATTTTATTTTTAAAATAAATATTTTAGTAAAAGAAGAAAAGCAAAAAACTCCATATTACATATATAGTTAATG‑‑ATATATATATA‑‑TATATATATATATATATATA‑‑T‑GC‑AAGCGATCAGC < 1:1833162/126‑1 AGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑ATATATATATA‑‑TATATATATATATATATATA‑‑T‑GC‑AAGCGATAAGC > 2:273240/1‑128 AGAAAAAAAAAATTTATTTATAAAATAAAAATTTTATGAAATGAATCAAACAAAAAAACTCCATAATACCTATAGAGTTAATG‑‑ATATATATATA‑‑TATATATATATATATATATA‑‑T‑GC‑AAGCGATCAGC < 1:1682707/128‑1 AATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATAACCTATAGAGTTAATG‑‑ATATATATATA‑‑TATATATATATATATATATA‑‑T‑GC‑AAGCGATCAGCATA < 1:803597/128‑1 ATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑ATATATATATA‑‑TATATATATATATATATATA‑‑T‑TC‑AATCTCTCAGCATAA > 1:1001698/1‑128 AAAATTTTTTTTTTAAAATATATATTTTATGAAATGAAGCAAATCAAAAACCTCCATATTATCTATATAGTTAATG‑‑‑‑ATATATATA‑‑TATATATATATATATATATA‑‑T‑GC‑AAGCGATCAGCATAAAATGG < 2:755317/128‑1 AAATTGTATTTTTAAAATAAATATTTTATTAAATCAATCAAATCAAAAAACTCCATATTAACTATAGAGTTAATGATATATATATATA‑‑TATATATATATATATATATA‑‑T‑GC‑AAGCGATCAGCATAAAA < 2:2805647/128‑1 AAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑ATATATATATA‑‑TATATATATATATATATATA‑‑T‑TA‑AAGCGATCAGAATAAAATG > 1:2338867/1‑128 AAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑ATATATATATA‑‑TATATATATATATATATATA‑‑T‑GA‑AAGAGATCAGAATAAAATG > 2:2862332/1‑128 TTGTATTTTTAAAATAAATATTTTAGTTAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑ATATATATATA‑‑TATATATATATATATATATA‑‑T‑GC‑AAGCGATCAGCATAAAATGGgg < 2:3006679/128‑3 TTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAAG‑‑ATATATATATA‑‑TATATATATATATATATATA‑‑T‑GC‑ACGAGATCAGGATAAAATGGTG > 2:880142/1‑128 TGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑ATATATATA‑‑TATATATATATATATATATA‑‑T‑GC‑AAGCGATCAGCATAAAATGGTGAAA > 2:31129/1‑128 TTTAAAATAAATATATTATGAAATCCATCAACGCAAAAACCTCCAAATAACCTCTAGAGTTAAAG‑‑ATATATATATA‑‑TATATATATATATATATATA‑‑T‑GC‑AAGCGATCAGCATAAAATGGTGAAATTTA < 1:2614871/128‑1 TAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATTTTACCTATAGAGTTAATGATATATATATATA‑‑TATATATATATATATATATA‑‑T‑AC‑AAGCGATCAGCATAAAATGGTGATATTTA > 2:2947682/1‑128 TAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑ATATATATATA‑‑TATATATATATATATATATA‑‑TATCAAAGAGATCCGCATAAAATGGTGATATTTA > 1:1906061/1‑128 atattTATTTTATGAAATGAATCAAAGATAAAAACTATATATTACCTATAGAGTTAATG‑‑ATATATATATA‑‑TATATATATATATATATATA‑‑T‑GC‑AAGCGATCAGCATAAAATGGTGAAATTTAGATCTG < 2:1325542/123‑1 AAATATTTTATGATATGAATCAAAGAAAAAAACTATATATAACATATAGAGTTAATT‑‑ATATATATATA‑‑TATATATATATATATATATA‑‑T‑GC‑AAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAG < 2:462010/128‑1 AAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑ATATATATATA‑‑TATATATATATATATATATATTT‑TA‑AAGATATCAGCATTAAATGGTTAATTATAGAgatc > 1:1471727/1‑124 ATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑ATATATATATATTTATATATATATATATATATA‑‑T‑GC‑AAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAG < 1:947135/128‑1 ATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑ATATATATATA‑‑TATATATATATATATATATA‑‑T‑GC‑TAGCTATCAGCATAAAATGGTGATATTTAGATCTGAGTT > 2:1567902/1‑128 ATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑ATATATATATA‑‑TATATATATATATATATATA‑‑T‑GC‑AAGCGATCAGCATAAAATGTTGAAATTTAGATCTGAtgt > 1:682713/1‑125 ATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑ATATATATA‑‑TATATATATATATATATATA‑‑T‑GC‑AAGCGATCAGAATATAATGGTGAAATTTAGATCTGAGTTtctc > 2:1050481/1‑124 TTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑ATATATATA‑‑TATATATATATATATATATA‑‑T‑GC‑AAGCGAACATCATAAAATGGTGAAATATATATCTGATTTTGTCTT > 1:164024/1‑128 TAGTAAATTAAGCAAACCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑ATATATATATA‑‑TATATATATATATATATATA‑‑T‑GC‑AAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTT < 1:3101967/128‑1 GGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑ATATATATATA‑‑TATATATATATATATATATA‑‑T‑GC‑AAGCGATCAGCATAAAATGTTGAAATTTAGATCTGAGTTTGTCTTAA > 2:78488/1‑128 GAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑ATATATATATA‑‑TATATATATATATATATATA‑‑T‑GC‑AAGCGATCAGCATAAATTTGTGAAATTTAGATCTGAGTTTTTGTTAAA > 2:706286/1‑128 ATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑ATATATATATA‑‑TATATATATATATATATATA‑‑T‑GC‑AAGCGATCAGCTTAATATTGTGAAATTTATATCTGAGTTTGTCTTAAATTT > 2:3263695/1‑128 taatatAAGCAAAAACCTCCATATTAACTATAGAGATAATG‑‑ATATATATATA‑‑TATATATATATATATATATA‑‑T‑GC‑AAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGT < 2:248535/122‑1 taacaAAATCAAATAACTCTATATTAAATATATAGTTTATT‑‑ATATATATATA‑‑TATATATATATATATATATA‑‑T‑GC‑AAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGT < 2:2099735/123‑1 GAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑ATATATATATA‑‑TATATATATATATATATATA‑‑T‑GA‑AAGAGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTTGTATAAAATTTGT > 1:3171520/1‑128 AAGCAAATCAAAAAACTACATATTATCTATAGAGTTAATG‑‑ATATATATATA‑‑TATATATATATATATATATA‑‑T‑GC‑AAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTA < 2:1981868/128‑1 AGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑ATATATATA‑‑TATATATATATATATATATA‑‑T‑GC‑AAGAGCTCAGAATAAAATGTTGATATTTAGATCTGAGTTGGTCTTAAATGTGTAGTTTATAT > 2:2038319/1‑128 GCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑ATATATATATA‑‑TATATATATATATATATATA‑‑T‑GA‑AAGAGATCAGCATAATATTGTGAAATTTATATCTGAGTTTGTGTAATATTTTTATTTTTTA > 2:1619170/1‑128 aAAAAACCTCAATATAACCTATAGAGTTAATG‑‑ATATATATATA‑‑TATATATATATATATATATA‑‑T‑GC‑AAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTAT < 2:305288/127‑1 AAAAACCTCCATATTACCTATAGAGTTAATG‑‑ATATATATATA‑‑TATATATATATATATATATA‑‑T‑GC‑AAGAGATCAGCATAATATGGTTATATTTAGATCTGAGTTGGTCATAAATTTGTATTTTTTATT > 1:141501/1‑128 AAAACCTCCATATTACCTATAGAGTTAATG‑‑ATATATATATA‑‑TATATATATATATATATATG‑‑T‑GC‑AAGAGATCAGGATAAAATGTTAATATTTAGATCTGAGTTTGTATTAAATATTATGTTTTTATTT > 2:585999/1‑128 AAACCTCCATATTACCTATAGAGTTAATG‑‑ATATATATATA‑‑TATATATATATATATATATA‑‑T‑GC‑AAGAGATCAGAATAAATTGGTGATATTTATATCTGAGTTGGTGTTAATTTTGTAGTTTTTTTTTt > 1:2429787/1‑127 actATATTATATATAGATATAATG‑‑‑‑ATATATATA‑‑TATATATATATATATATATA‑‑T‑GC‑AAGAGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTA < 2:354378/125‑1 aATATTAACTATAGAGATAATG‑‑ATATATATATA‑‑TATATATATATATATATATA‑‑T‑GC‑AAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTA < 2:547674/127‑1 ATATTACCTTTAGAGTTAATG‑‑ATATATATATA‑‑TATATATATATATATATATA‑‑T‑TC‑AAGCGATCAGCATATAATGGTGATATTTTGATCTGAGTTGGTATTAAATGTGTAGTTTTTATTTATATTTTAT > 1:199093/1‑128 ATATTACCTATAGAGTTAATG‑‑ATATATATATA‑‑TATATATATATATATATATA‑‑T‑GC‑AAGCGATCAGCATAAAATTGTGAAATTTATATCTGAGTTTGTCTTAAATTTTTAGTTTTTATTTATAGTTTAT > 2:645668/1‑128 TATTACCTATAGAGTTAATG‑‑ATATATATATA‑‑TATATATATATATATATATA‑‑T‑GC‑AAGCGATCAGCATAAAATGGTGAAATATAGATCTGAGTTGGTCTTAATTTTGTAGTTTTTATTTATATTTTATA > 1:404975/1‑128 ATTACCTATAGAGTTAATG‑‑ATATATATATA‑‑TATATATATATATATATATA‑‑T‑GA‑AAGCGATGCGCAAAAAATGGTGAAATTTAGATCAGAGTTGGTATTTAATTTTTAGTTTTTTTTTAGAGATTTTAt > 1:638104/1‑127 TTACCTATAGAGTTAATG‑‑ATATATATATA‑‑TATATATATATATATATATA‑‑T‑AC‑AAGCGATCAGAAAAAAAAGGTGATATTTAGATCTGAGTTGGTGATAAATATATATTTTTTATTTATAGTTTATAAA > 2:2017491/1‑128 TTACCTATAGAGTTAATG‑‑‑‑ATATATATA‑‑TATATATATATATATATATA‑‑T‑GC‑AAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATATTTTATAAAtt > 2:1221236/1‑126 TTACCTATAGAGTTAATG‑‑‑‑ATATATATA‑‑TATATATATATATATATATA‑‑T‑GC‑AAGCGATCAGAATAAAATGGTGAAAGTTAGATCAGAGGTGGTCTTTAATTTGTAGTTTTTATTTATAGTTTATCAAGa > 1:2161305/1‑127 TACCTATAGAGTTAATGATATATATATATA‑‑TATATATATATATATATATA‑‑T‑GC‑AAGCTATCAGAATAAAATGGTTAAATTTAGATCAGAGTTTGTCTTAAATTTTTATTTTTTATTTATATATTATAA > 2:2267288/1‑128 aTATAGAGTTAATG‑‑ATATATATATA‑‑TATATATATATATATATATA‑‑T‑GC‑AAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTA < 1:44695/127‑1 TATAGATATATTT‑‑ATATATATATA‑‑TATATATATATATATATATA‑‑T‑GC‑AAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAA < 1:1226870/128‑1 TAGAGTTAATG‑‑ATATATATATA‑‑TATATATATATATATATATA‑‑T‑GC‑AATCGATCATCATAAAATTTTGAAATATAGATATGAGTTTGTCTTAAATTTTTAGTTTTTATTTATAGTATATAAATTTAATA > 2:2328813/1‑128 TAGAGATAATGATATATATATATA‑‑TATATATATATATATATATA‑‑T‑GC‑AAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAA < 1:858715/128‑1 AGAGTTAATG‑‑‑‑ATATATATA‑‑TATATATATATATATATATA‑‑T‑GC‑AAGCGCTCAGCATAAAATGGTGAAATTTAGATCTGAGTTTGTATTAAATTTGTAGTTTTTATTTATATTTTATAAAGATAATAATa > 2:1031865/1‑127 AGTTTATG‑‑ATATATATATA‑‑TATATATATATATATATATA‑‑T‑GC‑AAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATT < 1:1276744/128‑1 GTTAATT‑‑ATATATATATA‑‑TATATATATATATATATATA‑‑T‑GC‑AAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGGCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTT < 1:3043442/128‑1 aTAATT‑‑ATATATATATA‑‑TATATATATATATATATATA‑‑T‑GC‑AAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTA < 2:144456/127‑1 atatatATATATATATA‑‑TATATATATATATATATATA‑‑T‑GC‑AAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTA < 2:2388558/122‑1 taatgATATATATA‑‑TATATATATATATATATATA‑‑T‑GC‑AAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGAT < 2:3173465/123‑1 atATATATATATA‑‑TATATATATATATATATATA‑‑T‑GC‑AAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGATT < 2:2680210/126‑1 tATATATATATA‑‑TATATATATATATATATATA‑‑T‑GC‑AAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGATTT < 1:2638225/127‑1 ATATATATA‑‑TATATATATATATATATATA‑‑T‑GC‑AAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGATTTTTA < 1:238873/128‑1 ATATATATA‑‑TATATATATATATATATATA‑‑T‑GA‑AAGCGATCAGAATAAAATTGTGATATATATATCTGAGTTGGTCTTAAATTTTTATTTTTTATTTATAGTTTATAAAGTTAATAATTTATATTTTTt > 1:516909/1‑127 TATATATA‑‑TATATATATATATATATATA‑‑T‑GC‑AAGCGCTCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGATTTTTAA > 2:2288432/1‑128 TATATATA‑‑TATATATATATATATATATA‑‑T‑GC‑AAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGATTTTTAA < 2:1367400/128‑1 TATATATA‑‑TATATATATATATATATATA‑‑T‑GC‑AAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGATTTTTAA < 2:2557846/128‑1 TATATATA‑‑TATATATATATATATATATA‑‑T‑GC‑AAGAGAGCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGATTTTTAA < 2:2171074/128‑1 TATATATA‑‑TATATATATATATATATATA‑‑T‑GA‑AAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTATATTTTTAA < 1:2796215/128‑1 |||||| GAAACTTATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP016816/437754‑437880‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ATATATA‑‑TATATATATATATATATATA‑‑T‑GC‑AAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGATTTTTAA > CP016816/437881‑438007 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |