| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP016816 | = 203895 | 481 (0.260) | 273 (0.130) +TTT |
76/214 | 24.6 | 33.7% | intergenic (+279/+179) | JCVSYN2_00845/JCVSYN2_00850 | lipoprotein/inorganic diphosphatase |
| ? | CP016816 | 203896 = | 547 (0.260) | intergenic (+280/+178) | JCVSYN2_00845/JCVSYN2_00850 | lipoprotein/inorganic diphosphatase | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
Only 100 of 336 total aligned reads displayed.
TTAATTTTTTTTATAAAAAAAAATAAAAATTTTTCATTTAAAGCCATTTGTAAAAAAGCCTATGTTCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGCTTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP016816/203769‑203895‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTTTTTTTTTTTTTTTGTAAAAATAAAAGTAAGATTTGGATCAACCAAA‑AC‑TATATCAAAAAAATT‑AAAAAAAATAGTTTAGTTGAGTTTCAAATCTGCATATATAGTACAAAGGAATTTATGATAG > CP016816/203896‑204022 ||||| TTAATTTTTTTTATAAAAAAAAATAAAAATTTTTCATTTAAAGCCATTTGTAAAAAAGCCTATGTTCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGCTTG‑T > 1:988600/1‑128 atTTTTTTTTATAAAAAAAAATAAAAATTTTTCATTTTAACCCATTTTTAAAAAATCATATGTTCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTAAAAGTGTATTTTTTAGGCTTG‑TTT < 1:400689/126‑1 AATTTTTTTTAAAAAAAAAAATAAAAATTTTTAATTTAAACCCATTTTTAAAAAATCCTATTTTCTAGGCTTTTTATTATAATTATAAACATTACAACGCTTTCAAAGTGTATTTTTTAGGCTTG‑TTT < 2:1654563/128‑1 TTTTTTTTTTTAAAAAAATAAAAAATTTTTCATTTTAAGGCATTTGTAAATAAGCCTATTTTTTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGCTTG‑TTT‑TT < 1:2441302/128‑1 TTTTTTTTAT‑AAAAAAAATTAAAATTTTTCATTTAAAGCCATTTGTAAAAAAGCCTATGTTCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGCTTG‑TTT‑TTT > 2:480042/1‑128 TTTTTTTATAAAAAAAAATAAAAATTTTTCATTTAAAGCCATTTGTAAAAAAGCCTATGTTCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGCTTG‑TTT‑TTT > 1:753255/1‑128 TTTTTTATAAAAAAAAATAAAAATTTTTCATTTAAAGCCATTTGTAAAAAAGCCTATGTTCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGCTTG‑TTT‑TTTT < 2:3449666/128‑1 TTTTATAAAAAAATAAATAAAAATATTTCATTTAAAGCCAATTGTAAAAAAGCCTATGTTCTAGGCTTTTTTTTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGCTTG‑TTT‑TTTT < 2:1361447/128‑1 TTTTTATAAAAAAAAATAAAAATTTTTCATTTAAAGCCATTTGTAAAAAAGCCTATGTTCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGCTTG‑TTT‑TTTTT > 2:3893607/1‑128 TTTTATAAAAAAAAATAAAAATTTTTCATTTAAAGCCTTTTGTAAAAATGCCTTTGTTCTATGCTTTTTATTATAGTTATCAAAATTACAACGCTTTCAAAGTGTTTTTTTTAGGATTG‑TTT‑TTTTTT > 2:1790574/1‑128 TTTTATAAAAAAAAATAAAAATTTTTCATTTAAAGCCATTTGTAAAAAAGCCTATGTTCTAGGCTTTTTTTTATACTTATCAACATTACAACGCTTTCAATGTGTATTTTTTAGGCTTG‑TTT‑TTTTTT > 2:1129573/1‑128 TTTATAAAAAAAAATAAAAATTTTTCATTTAAATCCATTTTTAAAAAACCCAATGTTCTATGATTTTTATTATACTTATCAACATTACAACGCTTTCAAAGGGTATTTTTTAGGCTTG‑TTT‑TTTTTTT < 1:1120599/128‑1 TTTATAAAAAAAAATAAAAATTTATAATTTAAATCCATTTTTAAAAAAGCCTATGTTCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGCTTG‑TTT‑TTTTTTT < 2:75462/128‑1 AAAAAAAATTAAAATTTTTCATTTAAAGACATTTGTAAAAAAGAATATGTTCTATGATTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTATGCTTG‑TTT‑TTTTTTTTTTTTT > 2:3997040/1‑128 AAAAAAATAAAAATTTTTCATTTAAAGCAATTTGTAAAAACCCCTATGTTATAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTTTATTTTTTCGGCTTG‑TTT‑TTTTTTTTTTTgta < 1:3655677/128‑4 AAAAAATAAAAATTTTTCATTTAAAGCCATTTGTAAAAAAGCCTATGTTCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGTCTTG‑TTT‑TTTTTTTTTTTTTTT > 2:833039/1‑128 AAAAATAAAAATTTTTCATTTAAAGCCATTTGTAAAAAAGCCTATGTTCTAGGCTTTTTATTATACTTATCAACATTACAACTCTTTCAAAGTGTATTTTTTAGGCTTG‑TTT‑TTTTTTTTTTTTTTTT > 2:1174552/1‑128 AAAAATAAAAATTTTTCATTTAAAGCCATTTGTAAAAAAGCCTATGTTCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGCTTG‑TTT‑TTTTTTTTTTTTTTTa > 2:3859313/1‑127 AAAAATAAAAATTTTTCATTTAAAGCCATTTGTAAAAAAGCCTATGTTCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGCTTG‑TTT‑TTTTTTTTTTTTTTTT > 2:4172074/1‑128 AAAAATAAAAATTTTTCATTTAAAGCCATTTGTAAAAAAGCCTATGTTCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGCTTG‑TTT‑TTTTTTTTTTTTGTTT > 1:3983910/1‑128 AAAAATAAAAATTTTTCATTTAAAGCCATTTGTAAAAAAGCCTATGTTATAGGATTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGCTTT‑TTT‑ATTTTTTTTTTTTTgt > 2:4278701/1‑126 AAATAAAAATTTTTCATTTAAAGCCATTTGTAAAAAAGCCTATGTTCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGCTTG‑TTT‑TTTTTTTTTTTTTTTTtt > 2:4431525/1‑126 ATAAAAATTTTTCATTTAAAGCCATTTGTAAAAAAGCCTATGTTCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGCTTT‑TTT‑TTTTTTTTTTTTTTTTaaaa > 2:3358119/1‑124 ATAAAAATTTTTCATTTAAACCCATTTTTAAAAAACCCTATGTTATATGCTTTTTATTTTAATTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGCTTG‑TTT‑TTTTTTTTTTTTTTgtaaaa < 2:3526029/128‑7 TAAAAATTTTTCATTTAAAGCCATTTGTAAAAAAGCCTATGTTCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGCTTG‑TAT‑TTTTTTTTTTTTTTagtaaaa > 2:2555820/1‑121 AAATTTTTCATTTAAAGCCATTTGTAAAAAAGCCTATGTTCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGCTTG‑TTT‑TTTTTTTTTTTTTTTT‑AAAAAATA > 2:237472/1‑128 ATTTTTCATTTAAAGCCATTTGTAAAAAAGCCTATGTTCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGCTTG‑TTT‑TTTTTTATTTTTTTTT‑T‑AAAATAAAA > 2:884580/1‑128 TTTTTCATTTAAAGCCATTTGTAAAAAAGCCTATGTTCTAGGCTTTTTATTATACTTATCACCATTACAACGCTTTCAAAGTGTAGTTTTTAGGCTTG‑TTT‑TTTTTTTTTTTTTTTT‑TAAAATTAAAt > 2:2444017/1‑127 TTTTTCATTTAAAGCCATTTGTAAAAAAGCCTATGTTCTAGGCTTTTTATTATACTTATCAACATTTCAACGCTTTCAAAGTGTATTTTTTAGGCTTG‑TTT‑TTTTTTTTTTTTTTT‑‑TAAAAATAAAtt > 2:532614/1‑126 TTTTTCATTTAAAGCCATTTGTAAAAAAGCCTATGTTCTAGGCTTTTTATTATACTTATCAACATTACAACTCTTTCAAATTGTATTTTTTAGGCTAG‑TTT‑TTTTTTTTTTTTTTTT‑TAAAAAAAAAt > 2:3843558/1‑127 TTTTTCATTTAAAGCCATTTGTAAAAAAGCCTATGTTCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGCTTG‑TTT‑TTTTTTTTTTTTTTTGTAAAAAATAAA > 2:1535821/1‑128 TTTTCATTTAAAGCCATTTGTAAAAAAGCCTATGTTCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGCTTG‑‑TT‑TTTTTTTTTTTTTTTTGTAAAAATAAAAt > 2:4314068/1‑127 TTTTCATTTAAAGCCATTTGTAAAAAAGCCTATGTTCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTAGTTTTTAGGCTTG‑TTT‑TTTTTTTTTTTTTTTTaaacataaactt > 1:2334480/1‑116 TTTCATTTAAAGCCATTTGTAAAAAAGCCTATGTTCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGCTTG‑TTT‑TTTTTTTTTTTTTTTT‑TAAAAATAAAAtt > 1:1159958/1‑126 TCATTTAAAGCCATTTGTAAAAAAGCCTATGTTCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTTTATTTTTTAGACTAG‑TAT‑TTTTTTTTTTTTTTTT‑TAAAAAAAAAAATAA > 2:2924300/1‑128 tATTTAAAGCCATTTGTAAAAAAGCCTATGTTCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGCTTG‑TTT‑TTTTTTTTTTTTTTT‑‑TAAAAATAAAAattatt > 2:640795/2‑122 TTTAAAGCCATTTGTAAAAAAGCCTATGTTCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGCTTG‑‑TT‑TTTTTTTTTTTTTTTTGTAAAAATAAAATTAATAT > 2:4122028/1‑128 TAAAGCCATTTGTAAAAAAGCCTATGTTCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGCTTG‑TTT‑TTTTTTTTTTTTTTTTGTTAAAATAAAAGTAAGATT > 2:3649820/1‑128 TAAAGCCATTTGTAAAAAAGCCTATGTTCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGCTTG‑TTT‑TTTTTTTTTTTTTTTTAAAAAAAAAAgattcatttg > 1:2308394/1‑118 TAAAGCCATTTGTAAAAAAGCCTATGTTCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGCTTG‑TTT‑TTTTTTTTTTTTTTT‑‑TAAAAATAAAATTATGATTTG > 2:3735038/1‑128 AAAGCCATTTGTAAAAAAGCCTATGTTCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGCTTG‑TTT‑TTTTTTTTTTTTTTTT‑TAAAATTAAAAGTAATATTTG > 1:1536767/1‑128 AAAGCCATTTGTAAAAAAGCCTATGTTCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGCTTG‑TTT‑TTTTTTTTTTTTTTT‑‑TAAAAATAAAATTAATATTTtt > 2:2781067/1‑126 AAGCCATTTGTAAAAAAGCCTATGTTCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGCTTG‑TTT‑TTTTTTTTTTTTTTTT‑TTAAAATAAAATTAATTTTTGG > 1:3415012/1‑128 AAGCCATTTGTAAAAAAGCCTATGTTCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGCTTG‑TTT‑TTTTTTTTTTTTTTT‑‑TAAAAATAAAATTAATATTTGGA > 2:3571557/1‑128 AGCCATTTGTAAAAAAGCCTATGTTCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGCTTG‑TTT‑TTTTTTTTTTTTTTT‑‑TAAAAATAAAAGTAATATTTTGAT > 2:2085129/1‑128 TAAAAAAGCCTATGTTCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGCTTG‑TTT‑TTTTTTTTTTTTTTT‑‑TAAAAATAAAAGTAATATTTGGATCAACCAAAt > 2:561310/1‑127 AAAAGCCTATGTTCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGCTTG‑TTT‑TTTTTTTTTTTTTTT‑‑TAAAAATAAAATTAAGATTTTGATCAAACACA‑AT‑TA > 1:3026916/1‑128 AAGCCTATGTTCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGCTTG‑TTT‑TTTTTTTTTTTTTTTT‑T‑AAAATAAAATAAAGATTTGGATAAACAAAA‑Aaatat > 1:4171979/1‑123 GCCTATGTTCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGCTTGTTTT‑TTTTTTTTTTTTTTTTTTAAAAATAAAATTAATATTTGAATAAACAAAA‑AA‑TAT > 2:3594000/1‑128 GCCTATGTTCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGCTTG‑‑TT‑TTTTTTTTTTTTTTTTGTTAAAATAAAATTATAATTTGGTTCAAACAAA‑Aattaaa > 2:3611662/1‑122 ATGTTCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGCTTG‑TTT‑TTTTTTTTTTTTTTT‑‑TAAAAATAAAATTAAGATTTGGATAAACCAAA‑Aaaattaaaaaa > 2:4021113/1‑117 GTTCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGCTTG‑TTT‑TTTTTTTTTTTTTTTT‑TAAAAATAAAATTAATATTTGGAAACAACAAA‑AA‑GATATCAAAAA > 1:534820/1‑128 GTTCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGCTTG‑‑TT‑TTTTTTTTTTTTTTTTGTAAAATATAAAGTAATATTTGGTTCCAAAAAA‑AA‑TATTTAAAAAA > 2:299005/1‑128 tttTAGGTTTTTTATTAAAATTTTCAACAATAAAACGCTTTCAAAGTTTATTTTTTATGCTTG‑‑TT‑TTTTTTTTTTTTTTTTGTAAAAATAAAAGTAAGATTTGGATCAACCAAA‑AC‑TATATCAAAAAA < 1:4479982/125‑1 TTCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGCTTG‑TTT‑TTTTTTTTTTTTTTT‑‑TAAAAATAAAATTAATATTTTGATCAACAAAA‑AA‑TATATAAAAAAAA > 2:2611505/1‑128 TCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGCTTG‑TTT‑TTTTTTTTTTTTTTTTTTAAAAAAAAAATTAATTATTGGATAAACAAAA‑AA‑AAAAACAAAAAA > 2:3095249/1‑128 CTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGCTTG‑TTT‑TTTTTTTTTTTTTTTT‑TAAAAAAAAATTAAAGATTTGGCTC‑ACCAAA‑ACATATAACAAAAAAta > 1:4127359/1‑126 TAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGCTTG‑TTTGTTTTTTTTTTTTTTTTGTAAAAATAAAAGTTAATTTTGGGTCACCCAAA‑AC‑TATATCTAAAAAA > 1:3882158/1‑128 AGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGCTTG‑TTT‑TTTTTTTTTTTTTTT‑‑TAAAAATAAAAGTATGATTTGTTTGAACCAAA‑AA‑TAATTCAAAAAAATA‑AA > 2:4335134/1‑128 GGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGCTTG‑TTT‑TTTTTTTTTTTTTTTT‑T‑AAAATAAATTTAATATTTTGATAGACCAAA‑AC‑TATATAAAAAAAATT‑AAA > 1:4611803/1‑128 CTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGCTTG‑TTT‑TTTTTTTTTTTTTTT‑‑TAAAAATAAATTTAAGATTTGTATCAACCAAA‑AC‑TATATAAATAAAAAT‑AAAAA > 1:282482/1‑128 TTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGCTTG‑TTT‑TTTTTTTTTTTTTTTT‑TAAAAATTAAATTAAAATTTTGATAAACAAAA‑AA‑TATAAAAAAAAAATT‑AAAAA > 2:4558785/1‑128 TTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGCTTG‑TTT‑TTTTTTTTTTTTTTT‑‑TAAAAATAAAAGTAATATTTTGATAAAACAAA‑AA‑TATATAAAAAAAATT‑AAAAAAAA > 2:2815278/1‑128 TTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGCTTG‑‑TT‑TTTTTTTTTTTTTTTTGTAAAAATAAAAGTAAGATTTGGAT‑AACCAAA‑AA‑CTTTTAAAAAAAATT‑TTAAAAAA > 1:1025515/1‑128 TTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGCTTG‑TTT‑TTTTTTTTTTTTTTTT‑TAAAAATAAAAGTAATATTTTTATAAACCAAA‑AA‑TATATCAAAAAAATT‑AAAAAAAA > 2:1607140/1‑128 TTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGCTTG‑TTT‑TTTTTTTTTTTTTTTT‑TAAAAAAAAAAGTAACATTTTGATAAACCAAA‑AC‑TTAAAAAAAAAAATT‑AAAAAAAA > 1:3480804/1‑128 TTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGCTTG‑TTT‑TTTTTTTTTTTTTTT‑‑TAAAAATAAAAGTAAATTTTGGATACCACAAA‑AA‑TATAACAAAAAAATA‑AAAAAAAAa > 1:4405320/1‑127 TATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGCTTG‑TTT‑TTTTTTTTTTTTTTT‑‑TAAAAATAAATGTAATATTTGGATCACCCAAACAT‑TATA‑AAAAAAAATT‑AAAAAAAATATTT > 2:1731641/1‑128 ATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGCTTG‑TTT‑TTTTTTTTTTTTTTGT‑TAAAAAT‑AAATTAAGATTTTGATAAACCAAA‑AC‑TTAATAAAAAAAATT‑AAAAAAAGTATTTT > 1:2621946/1‑128 ACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGCTTG‑TTT‑TTTTTTTTTTTTTTTT‑TAAAAAAAAAATTAAGATTTGGAAAAACCAAA‑AA‑TATAAAAAAAAAATT‑AAAAAAAAAATTTTA > 2:4477949/1‑128 CTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGCTTG‑TTT‑TTTTTTTTTTTTTTT‑‑TAAAAAAAAAAGTAATATTTGGATAAACAAAA‑AA‑TATATAAAAAAAATT‑AAAAAAAAAAATTTAtt > 2:1419489/1‑126 TTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGCTTG‑TTT‑TTTTTTTTTTTTTTT‑‑TAAAAATAAAATTAATATTTTGATAAAACAAA‑AA‑AATATAAAAAAAAAT‑AAAAAAAATAGTTTTGTT > 1:1281069/1‑128 TTATAAACATTACAACGCTTTAAAAGTGTTTTTTTTAGGGT‑‑‑TTT‑TTTTTTTTTTTTTTTTGTAAAAATAAAAGTAAGATTTGGATCAACCAAA‑AC‑TATATCAAAAAAATT‑AAAAAAAATAGTTTAGTT < 1:3872993/128‑1 ataaAACATAACAAC‑CTTTCAAAGTGTATTTTTTAGGCTTG‑‑TT‑TTTATTTTTTTTTTTTGTAAAAATAAAAGTAAGATTTGGATCAACCAAA‑AC‑TATATCAAAAAAATT‑AAAAAAAATAGTTTAGTTG < 1:4055109/124‑1 ATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGCTTG‑TTT‑TTTTTTTTTTTTTTT‑‑TAAAAATAAAATTAATATTTGGATAAACCAAA‑AA‑TAATTAAAAAAAATT‑AAAAAAAAAATTTTATTTGA > 2:2138154/1‑128 ATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGCTTG‑TTT‑TTTTTTTTTTTTTTT‑‑TAAAAATAAAAGTAAGATTTTGATAAACCAAA‑AC‑TATATCAAAAAAATT‑AAAAAAAATAGTTTAGTTta > 2:2217038/1‑126 CAACGCTTTCAAAGTGTATTTTTTAGGCTTG‑TTT‑TTTTTTTTTTTTTTTTTTAAAAATAAAATTAATATTTGGATCAAACAAA‑AA‑TATAAAAAAAAAATT‑AAAAAAAATATTTTATTTTATTTTAAAA > 2:4627891/1‑128 CAACGCTTTCAAAGTGTATTTTTTAGGCTTG‑TTT‑TTTTTTTTTTTTTTTTTTAAAAATAAAAGTAATATTTGGATAAACCAAA‑CA‑ATTATCAAAAAAATT‑AAAAAAAAAAGTTTATTTTAGTTTCAAA > 2:1031770/1‑128 atttTTTTAAAGTTTATTTTTTAGG‑TT‑‑TTT‑TTTTTTTTTTTTTTTTGTAAAAATAAAAGTAAGATTTGGATCAACCAAA‑AC‑TATATCAAAAAAATT‑AAAAAAAATAGTTTAGTTGAGTTTCAAATCTG < 2:3965447/124‑1 ACGCTTTCAAAGTGTATTTTTTAGGCTTG‑‑TT‑TTTTTTTTTTTTTTTTGTAAAAATAAAAGTAAGATTTGGTTCAACCAAA‑AA‑ATTATAAAAAAAATT‑AAAAAAAATATTTTATTTTAGTTaaaaaaat > 2:2667745/1‑120 GTATTTTTTAGGCTTG‑‑TT‑TTTTTTTTTTTTTTTTGTAAAAAAAAAAGTAAGATTTGGATCAACCAAA‑AC‑TATATAAAAAAAATT‑AAAAAAAATAATTTATTTGTGTTTCAAAAGTTCATATATAGTAC > 2:379500/1‑128 tttttttttttgT‑TTTTTTTTTTTTTTTTTTATATATAAAAGTAAGATTTGGATCAACAAAA‑AC‑TATATCAAAAAATTT‑AAAAAAAATAGTTTAGTTGAGTTTCAAATCTGCATATATAGTACAAAGG < 1:1857784/116‑1 TAGGCTTG‑‑TT‑TTTTTTTTTTTTTTTTGTAAAAATAAAAGTAAGATTTGGATCAACCAAA‑AC‑TATATAAAAAAAATT‑AAAAAAAATAGTTTATTTGATTTTAAAATATGCATATATAGTACAAAGGAAT > 2:69263/1‑128 ttttttgT‑TTTTTTTTTTTTTTTTGTAAAAATAATAGTAAGATTTGGATCAAACAAA‑AC‑TATATCAAAAAAATT‑AAAAAAAATAGTTTAGTTGAGTTTCAAATCTGCATATATAGTACAAAGGAATTT < 1:3588722/121‑1 tttttTTT‑TTTTTTTTTTTTTTTTGTAAAAATAAATGTATGATTTGGATCAAACTAA‑AC‑TATATCAAAAAAATT‑AAAAATAATAGTTTAGTTGAGTTTCAAATCTGCATATATAGTACAAAGGAATTT < 1:256665/123‑1 tttttTTT‑TTTTTTTTTTTTTTTTGTAAAAATAAAAGTAATATTTGGATAAAACAAA‑AC‑TATATCAAAAAAATT‑AAAAAAAATAGTTTAGTTGAGTTTCAAATCTGAATATATAGTACAAAGGAATTT < 1:1644269/123‑1 tgtttTTT‑TTTTTTTTTTTTTTTTGTAAAAATTATTGTATGATTTTGATCAACAAAA‑AC‑TATATCAAAAAAATT‑AAAAAAAATAGTTTAGTTGAGTTTCAAATCTGCATATATAGTACAAAGGAATTT < 1:923983/123‑1 ggtttTTT‑TTTTTTTTTTTTTTTTGTAAAAATAAAAGTAAGATTTGGATCAACCAAA‑AC‑TATATCAAAAAAATT‑AAAAAAAATAGTTTAGTTGAGTTTCAAATCTGCATATATAGTACAAAGGAATTT < 1:3611662/123‑1 ttttTTT‑TTTTTTTTTTTTTTTTGTAATAATAAAAGTAAGATTTGGATAAACCAAA‑AC‑TATATAAAAAAAATT‑AAAAAAAATAGTTTAGTTGAGTTTCAAATCTGCATATATAGTACAAAGGAATTTA < 2:3234744/124‑1 ttttTTT‑TTTTTTTTTTTTTTTTGTAAAAATTAAAGTAATATTTGGATCAACAAAA‑AA‑TATATAAAAAAAATTAAAAAAAAATAGTTTATTTGAGTTTCAAATCTGCATATATAGTACAAAGGAATTT < 1:2012202/124‑1 tcttgTT‑TTTTTTTTTTTTTTTTGTAAAAATAAAAGTAAGATTTGGATCAACCAAA‑AC‑TATATCAAAAAAATT‑AAAAAAAATAGTTTAGTTGAGTTTCAAATCTGCATATATAGTACAAAGGAATTTA < 1:4294879/123‑1 tttTTT‑TTTTTTTTTTTTTTTTGTAAAAATAAAAGTAAGATTTGTATCAAACAAA‑AC‑TATATAAAAAAAATT‑AAAAAAAATAGTTTAGTTGAGTTTCAAATCTGCATATATAGTACAAAGGAATTTAT < 2:1270238/125‑1 gatTTT‑TTTTTTTTTTTTTTTTGTAAAAATAAATGTAATATTTTTATAAAACAAA‑AC‑TATATCAAAAAAATT‑AAAAAAAATAGTTTAGTTGAGTTTCAAATCTGCATATATAGTACAAAGGAATTTAT < 1:3961759/125‑1 ttTTT‑TTTTTTTTTTTTTTTTGTAAAAATAAAAGTAAGATTTGGATCAACCAAA‑AC‑TATATCAAAAAAATT‑AAAAAAAATAGTTTAGTTGAGTTTCAAATCTGCATATATAGTACAAAGGAATTTATG < 2:586938/126‑1 ttgT‑TTTTTTTTTTTTTTTTGTAAAAATAAAAGTAAGATTTGGATCAACCAAA‑AC‑TATATCAAAAAAATT‑AAAAAAAATAGTTTAGTTGAGTTTCAAATCTGCATATATAGTACAAAGGAATTTATGA < 1:3777993/125‑1 TTT‑TTTTTTTTTTTTTTTTGTAAAAATATAAGTAAGATTTGTATCTACAAAA‑AC‑TATATCAAAAAAATT‑AAAAAAAATAGTTTAGTTGAGTTTCAAATCTGCATATATAGTACAAAGGAATTTATGAT < 2:1909347/128‑1 T‑TTTTTTTTTTTTTTTTTTAAAAATAAAAGTAATATTTTGATTAAAAAAA‑TA‑TATATAAAAAAAATT‑ATAAAAAATAGTTTAGTTGAGTTTCAAATCTGCATATATAGTACAAAGGAATTTATGATAG < 1:2766871/128‑1 T‑TTTTTTTTTTTTTTTTTTAAAAATAAAAGTAAGATTTGGATCAACCAAA‑AC‑TTTTTAAAAAAAATT‑AAAAAAAATATTTTATTTGATTTTAAAATATGCATATATATTACAAAGGAATTTTTTATAt > 2:4079351/1‑127 T‑TTTTTTTTTTTTTTTTGTAAAATTAATAGTAAGATTTTGATCAACAATA‑AA‑TATATCAAAAAAATT‑AAAAAAAATAGTTTAGTTGAGTTTCAAATCTGCATATATAGTACAAAGGAATTTATGATAG < 1:1579613/128‑1 T‑TTTTTTTTTTTTTTTTGTAAAAATAAAAGTAAGATTTTGATCAAACAAA‑AC‑TATATCAAAAAAATT‑AAAAAAAATAGTTTAGTTGAGTTTCAAATCTGCATATATAGTACAAAGGAATTTATGATAG < 2:2545891/128‑1 ||||| TTAATTTTTTTTATAAAAAAAAATAAAAATTTTTCATTTAAAGCCATTTGTAAAAAAGCCTATGTTCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGCTTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP016816/203769‑203895‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTTTTTTTTTTTTTTTGTAAAAATAAAAGTAAGATTTGGATCAACCAAA‑AC‑TATATCAAAAAAATT‑AAAAAAAATAGTTTAGTTGAGTTTCAAATCTGCATATATAGTACAAAGGAATTTATGATAG > CP016816/203896‑204022 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |