New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP016816 165253 =1148 (0.640)186 (0.120) 75/220 36.5 16.2% intergenic (+217/‑325) JCVSYN2_00665/JCVSYN2_00670 tRNA N6‑adenosine(37)‑N6‑threonylcarbamoyltransferase complex dimerization subunit TsaB/tRNA‑Ser
?CP016816 = 165249 919 (0.590)intergenic (+213/‑329) JCVSYN2_00665/JCVSYN2_00670 tRNA N6‑adenosine(37)‑N6‑threonylcarbamoyltransferase complex dimerization subunit TsaB/tRNA‑Ser
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 1216 total aligned reads displayed.

GATAATATTTAGTTTCATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTAAAAGAATTAATTTGAACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTTAT‑‑AATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAAATAGAAAGGAAAAAATATTGTTAAAAGTAATACTAAAATTATTTAATGTTAATTAAAA  >  CP016816/165122‑165376
                                                                                                                               |                                                                                                                                  
  taataTTTAGTTTCATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGA‑tt                                                                                                                                 >  1:2260861/1‑128 (MQ=255)
   aataTTTAGTTTCATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCATATTTTTAAAAAATTAATTTGAACTTGTAAATAATAGC‑ttt                                                                                                                                >  1:625687/1‑128 (MQ=255)
      tattatgtacATTAAATTAATGGAATTTTATGAATAATTAATTAACTAAAACTATTAATTTTTTATAAATTTTTTTTTTATGCAAATTTTTAAAAAATTAATTTTTACTTGTAAAAAATAGC‑tttttt                                                                                                                             <  2:3485553/119‑1 (MQ=255)
       tttAGTTTCATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATATC‑atttttt                                                                                                                            >  1:1496596/1‑128 (MQ=255)
         tAGTTTCATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑ttttttttt                                                                                                                          >  1:1592325/1‑128 (MQ=255)
           ttttCAATAATTTATCGCACTTGTATGAATTATTAACAAACAAAAACTATTATCTTTTTATATTTTTTTTTTATATGCAAATTTTTAAAAAATTAAATTGAACTTGTAAAAAATAGC‑ttttttttttt                                                                                                                        <  1:2907223/127‑1 (MQ=255)
           gTTTCATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTTTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGA‑ttttttttttt                                                                                                                        >  2:602817/1‑128 (MQ=255)
           gTTTCATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑ttttttttttt                                                                                                                        >  1:3826732/1‑128 (MQ=255)
            tttCATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑ttttttattttt                                                                                                                       >  2:3122144/1‑128 (MQ=255)
            tttCATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTAGTAAAAAATAGC‑tttttttttttt                                                                                                                       >  2:678825/1‑128 (MQ=255)
              tCATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑tttttttttttttt                                                                                                                     >  2:2327090/1‑128 (MQ=255)
               cATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑ttttttttttttttt                                                                                                                    >  1:3448763/1‑128 (MQ=255)
               cATTAATTTAACGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTTTATATGCAAATATTTAAAAAATTAATTTGAAATTGTAAAAAATAGC‑ttttatttttttttt                                                                                                                    >  2:1262858/1‑128 (MQ=255)
                aTTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑tttttttttttttttt                                                                                                                   >  1:3390722/1‑128 (MQ=255)
                aTTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑tttttttttttttttt                                                                                                                   >  1:1677665/1‑128 (MQ=255)
                  tAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑tttttttttttttttttt                                                                                                                 >  1:3619749/1‑128 (MQ=255)
                   aaTTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑tttttttttttttttttta                                                                                                                >  1:913807/1‑127 (MQ=255)
                     tttATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑ttttttttttttttttttaaa                                                                                                              >  2:301040/1‑125 (MQ=255)
                      ttATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTaat‑‑a                                                                                                           >  2:1356397/1‑128 (MQ=255)
                         tctcaattttATTAATTATTTATAAAATAAAAAAAATTTATTTTTATTTTTTTTTTTTATATTCAAAATTATAAAAAATTAATTTTTAATTTTAAAAAATATC‑‑TTTTTTTTTTTTTTTTTTAT‑‑AATgg                                                                                                       <  2:1195595/119‑1 (MQ=255)
                         attcaattttttGATTTAGTAATAAAATAAAAATTTTATTTTTTTTTATATTTTTTTTTTTTTGAAATTTTTTAAAAAATAATTTTAAATTGTAAAAAATATC‑‑TTTTTTTTTTTTTTTTTTAT‑‑AATgg                                                                                                       <  2:3397928/117‑1 (MQ=255)
                          cGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTTAT‑‑AATGGa                                                                                                      >  1:2131788/1‑128 (MQ=255)
                           gCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑ttttttttttttttttaaaaatggaaa                                                                                                        >  1:3499320/1‑117 (MQ=255)
                           gCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTtaaattaaa                                                                                                        >  1:864931/1‑121 (MQ=255)
                            cACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATATC‑tttttatttattttttataaaatctaaa                                                                                                       >  1:2793819/1‑116 (MQ=255)
                             aatttaattaaTTATTAAGAAACTAAAAATAATATATTTTTATATATTTTTTTTATATTCAAATTTTTAAAAAATTAATTTTAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTTAT‑‑AATGGAAat                                                                                                   <  1:774372/119‑1 (MQ=255)
                                tGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATATC‑TTTTTTTTTTTTTTTTTTTAT‑‑AATTTAAatat                                                                                                 >  1:2860710/1‑128 (MQ=255)
                                  tATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGCTTTTTTTTTTTTTTTTTTTTAA‑‑AATTGAAataaa                                                                                                >  2:194660/1‑126 (MQ=255)
                                  tATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTTAA‑‑AAtataaatataaa                                                                                              >  1:3682011/1‑128 (MQ=255)
                                    tGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTT‑T‑‑AATGTAATTATAAAtt                                                                                            >  1:3884055/1‑128 (MQ=255)
                                    tGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTTAT‑‑AAttaaattttaaatt                                                                                            >  2:3068334/1‑128 (MQ=255)
                                      aaTTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTTAT‑‑AATTAaaatttaaattta                                                                                          >  1:105655/1‑127 (MQ=255)
                                       tttattaATAAAATAAAACTTTTATCTTTTTATATATTTTTTGTTTTTGCAAATTTTTAAAAAAATAATTTTAAATTTTAAAAAATAG‑‑‑ATTTTTTTTTTTTTTTTTAT‑‑AATGGAAATATAAATTTTAg                                                                                        <  1:1812002/127‑1 (MQ=255)
                                        ttAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTTA‑‑‑AATTTAAATAAAAATTTTat                                                                                        >  2:2709200/1‑127 (MQ=255)
                                         tattaataaAATAAAACTATTATCTTTTTATTTATTTTTTTTATATTATAATTTTTAAAAAATTAATTTTAAATTTTTAAAAATATC‑‑TTTTTTTTTTTTTTTTTTAT‑‑AATGGAAATATAAATTTTAgg                                                                                       <  1:98467/125‑1 (MQ=255)
                                         tAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTTAT‑‑AATTTAAATATAAAttttttt                                                                                       >  2:401177/1‑125 (MQ=255)
                                         tAGTAAGAAACTAAAAAATTTATTATATTAGATATTTTTTTTTTATGAAAATTTTTAAAAAATTAATTTGAACTTTTAAAAAAAATC‑‑TTTTTTTTTTTTTTTTTTAT‑‑AATGGAAATATAAATTTTAgg                                                                                       <  1:2021837/128‑1 (MQ=255)
                                          aGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTTAT‑‑AATGTAAATTTAATTTTTatt                                                                                       >  2:254069/1‑126 (MQ=255)
                                          aGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTTAT‑‑AAATAAAATATAAAttttttt                                                                                       >  2:353472/1‑125 (MQ=255)
                                            tatataactaaaaataTTATTTTTTTATTTATTTTTTGTTTTTTCAAATTTTTAAAAAATTTTTTTTAAAATGTTAAAAATATC‑‑ATTTTTTTTTTTTTTTTTAT‑‑AATGGAAATATAAATTTTAGGTAt                                                                                    <  1:3541646/123‑1 (MQ=255)
                                            tAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTATAA‑‑AATTTAAATATAAAtttaaattat                                                                                    >  1:2653419/1‑121 (MQ=255)
                                               gAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTTAT‑‑AATTTAATTAAAAATTTTATTTAttttt                                                                                >  1:2509306/1‑127 (MQ=255)
                                                   ctaaaactaTTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTTAT‑‑AATGGAAATAAAATTTTTAGGTATTtttttg                                                                             >  1:1131582/1‑128 (MQ=255)
                                                    taaaactaTTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAG‑‑ATTTTTTTTTTTTTTTTTTAT‑‑AATTTAAATATAAATTTTATTTATtttttttt                                                                            >  1:1719267/1‑126 (MQ=255)
                                                    taaaaataTTATTATTTTTTATTTTTTTTTTTAATTGAAATTTTTAAAAAAATAATTTTTAAATTTAAAAAA‑ATT‑CTTTTTTTTTTTTTTTTTTAT‑‑AATGGAAATATAAATTTTAGGTATTTtgttgt                                                                            <  2:147343/128‑1 (MQ=255)
                                                      aaaattttatTTTTTTTTTTATTTTTTGTTTTTTTAAATTTTTAAAAAATTAATTTTAAATTTTAAAAAATA‑T‑TTTTTTTTTTTTTTTTTTTAT‑‑AATGGAAATATAAATTTTAGGTATTTTGTTGTCt                                                                          <  1:10008/122‑1 (MQ=255)
                                                       aaatattttttttttatattttttttttaTATTTAAATTTTTTAAAAATTAATTTTAAATTTTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTTAT‑‑AATGGAAATATAAATTTTAGGTATTTTGTTGTCTaa                                                                        <  2:1048885/125‑1 (MQ=255)
                                                       aaatattttatttTTTTATATTTTTTTTTTTTTAAAATTTTTTAAAAATTTATTTTTAATTTTTAAAAATA‑T‑TTTTTTTTTTTTTTTTTTTAT‑‑AATGGAAATATAAATTTTAGGTATTTTGTTGTCTa                                                                         <  1:2329520/125‑1 (MQ=255)
                                                        aattttttCTTTTTTTATTTTTTTTTTTTATTTAAATTTTTAAAAAAATAATTTGAAATTTTTAAAAA‑AAT‑TTTTTTTTTTTTTTTTTTTAT‑‑AATGGAAATATAAATTTTAGGTATTTTGTTGTCTaa                                                                        <  1:2174429/121‑1 (MQ=255)
                                                        aatattatTTTTTTATTTATTTTTTTTATATTAAAATTTTTAAAAAATTAATTTTTAATTTTTAAAAAT‑TT‑TTTTTTTTTTTTTTTTTTTAT‑‑AATGGAAATATAAATTTTAGGTATTTTGTTGTCTaa                                                                        <  2:1754707/126‑1 (MQ=255)
                                                         aaattatATTTTTTTTTATTTTTTGTATATTGAAATTTTTTAAAAATTTATTTGAACTTGTTAAAAATAG‑‑GTTTTTTTTTTTTTTTTTTAT‑‑AATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAg                                                                       <  2:3446075/126‑1 (MQ=255)
                                                           attatCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTTAACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTTAT‑‑AATTTAAATATAAATTTTATTTATTTTTTTTTATAATTAt                                                                    >  1:2566906/1‑128 (MQ=255)
                                                           attatCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTTAT‑‑AATTTAAATATAAATTTTATTTATTTTGTTTTATAATTa                                                                     >  1:2394189/1‑128 (MQ=255)
                                                            ttatTTTTTTTTATATTTTTTTTTATTTCAAATTTTTAAAAAATTAATTTTAAATTTTAAAAAATATC‑‑TTTTTTTTTTTTTTTTTTAT‑‑AATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTAt                                                                    <  1:125665/128‑1 (MQ=255)
                                                             tataTTTTTATATATTTTTTTTATATTTAAATTTTTAAAAAAATAATTTTAAATTTTAAAAAA‑AAT‑GTTTTTTTTTTTTTTTTTTAT‑‑AATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATc                                                                   <  1:2968889/128‑1 (MQ=255)
                                                             tatCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTAAT‑‑AATTGAAATAAAAAATTTATTTATtttttttacatataaaa                                                                   >  2:2470673/1‑117 (MQ=255)
                                                                ttttttAGTTATTTTTTTTAAATTAAAATTTTTAAAAAATTAATTTTAAATTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTTAT‑‑AATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCTaa                                                                <  1:3122144/127‑1 (MQ=255)
                                                                 tttttAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTTAA‑‑AAAATAAATATAAATTTTAGTTATTTTGTTTTATAATTATATaa                                                                >  2:361354/1‑128 (MQ=255)
                                                                   tttAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTTAT‑‑AATTTAAATATAAATTTTATGTTTTTTTTTTTATAATTTTATaaaa                                                              >  1:464513/1‑128 (MQ=255)
                                                                      tgATTTTTTTTTTATATTCAAAATTTTAAAAAATTAAATTTAAATTGTTAAAAATA‑‑‑TCTTTTTTTTTTTTTTTTTAT‑‑AATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAAATa                                                         <  2:2143729/127‑1 (MQ=255)
                                                                        atatTTTTTTTATATTCAAATTTTTAAAAAATTAATTTTAACTTTTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTTAT‑‑AATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAAATAg                                                        <  2:942988/128‑1 (MQ=255)
                                                                            tttttGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTT‑T‑‑AATGGAAATTATAATTTTAGGTTTTTTTTTTTATAATTTTATAAAAAAATaatgaa                                                    >  2:262715/1‑123 (MQ=255)
                                                                              ttttTATATTTAAATTTTTAAAAAATTAAATTGTAATTTTAAAAAAAATC‑‑TTTTTTTTTTTTTTTTTTAT‑‑AATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAAATAGAAAGGa                                                  <  2:2920636/128‑1 (MQ=255)
                                                                              tttGTATATGCAAATTTTTAAAAAATTAATTTTAACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTTAA‑‑AATTAAAATATAATTTTTTGTAATTTTTTTTGATAAATATAAATAAAAATATAAAga                                                   >  2:884357/1‑127 (MQ=255)
                                                                               ttGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTTAT‑‑AAT‑GAAATTTAAATTTTTTGTTTTTTTTTTTATAATTTATAAAAAAAATATAAAAGaa                                                 >  2:3723405/1‑128 (MQ=255)
                                                                               ttGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTTAT‑‑AATGTAAATATAAATTTTATGTATTTTTTTTTATAATTTTATAAAAAAATATAAATGaa                                                 >  1:685039/1‑128 (MQ=255)
                                                                               ttGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTTAT‑‑AATGTAAATATAAATTTTAGTTATTTTTTTTTAAAATTATATAAAAAATATGAAAGGaa                                                 >  2:3273053/1‑128 (MQ=255)
                                                                                 gTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTTA‑‑‑AATGAAAATATAATATTTTGTTATTTTTTTTTAAAAGTATAAAAAAAAAAAAAAATaaaaaa                                              >  2:2214122/1‑128 (MQ=255)
                                                                                  tataTGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTTAT‑‑AATGTAAATATAAATTTTATTTATTTTTTTTTATAATTATATAAAAAAATATAAAGTaaaaa                                              >  1:3770903/1‑128 (MQ=255)
                                                                                   atatGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTTAT‑‑ATTTGAAAATTAATTTTTATGTTTTTTTTTGGATAATTAACTAAAAAAATTAAAAGTaaaaat                                             >  2:769767/1‑127 (MQ=255)
                                                                                      tGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTTAT‑‑TATGAAATTAAAATTTTTAGTTTTTTTTTTGTAAAATTATATAAAAAAATA‑AAAAGAAAAAataat                                         >  2:2104025/1‑126 (MQ=255)
                                                                                      tGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTTAT‑‑TATTTAAATTAAAATTTTAGTTTTTTTGTTGTATAATTTACTAATAAAATATAAATTAAAAAATAtt                                         >  1:3057503/1‑128 (MQ=255)
                                                                                      tGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTTAT‑‑AATGTATATTTAAATTTTTTGTATTTTTTTGTATAAGTAGAAAAAAAAATATAAATGataaattttt                                         >  2:1692106/1‑123 (MQ=255)
                                                                                      tGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTTAT‑‑AATGGAAATATAAATTTTAGTTATTTTTTTGTAAAATTATATAAAAAAATATAAACTAAAAAAtttt                                         >  2:1872260/1‑128 (MQ=255)
                                                                                         aaaTTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTTAT‑‑AATTAAAAAAAAAATTTTATTTTTTTTTTTGTATAATTATAAAAAAAAAAAAAAATTaaaaataatttt                                       >  2:318963/1‑121 (MQ=255)
                                                                                         aaaTTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTTAT‑‑AATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATATAAAAAAATAGAAAGGAAAAAATATTGt                                       >  1:1344523/1‑128 (MQ=255)
                                                                                          aaTTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTTAA‑‑AATAAAAATATAAAATTTAATAATTTTTTTTTATAATTATAAAAAAAAATACAAATAAAATAATAtttt                                       >  2:2789651/1‑126 (MQ=255)
                                                                                           aTTTTTAAAAAATTAATTTTTAATTTTAAAAAATA‑T‑GTTTTTTTTTTTTTTTTTTAT‑‑AATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAAATAGAAAGGAAAAAATATTGTTa                                     <  2:3331052/128‑1 (MQ=255)
                                                                                            ttttAAAA‑AATTAATTTTTAATTTTAAAAAA‑AAT‑TTTTTTTTTTTTTTTTTTTAT‑‑AATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAAATAGAAAGGAAAAAATATTGTTaaa                                   <  2:2854469/128‑1 (MQ=255)
                                                                                                   aaaattaattTGAACTTGTAAAAAATAGC‑‑‑‑TTTTTTTTTTTTTTTTAT‑‑AATGAAAATTAAAATTTTAGTTATTTTGTTTTGTAATTATATAAAAAAATATAAAGTAAAAAATTTTTTTAAATGTAATaa                           >  1:1964643/3‑127 (MQ=255)
                                                                                                    aaattaattTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTTAT‑‑AATGGAAATATAAATTTTAGTTATTTTTTTTTATAATTATATAAAAAAATATAAAGGAAAAAATATTTTTAAAATTAATa                            >  1:3244135/2‑128 (MQ=255)
                                                                                                    aaattaattTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTTAT‑‑AATGGAAATATAAATTTTAGGTATTTTTTTTTATAAGTATCTAAAAAAATAGAAAGGAAAAATTATTTTTAAAATTAATa                            >  1:1437245/2‑128 (MQ=255)
                                                                                                     aattaattTGAACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTTATAAAATGAAAAAAAAAATTTTAGTATTTTTTTTTTAAAATTAAAAAAAAAAAAAAAAATGAAAAAAAATTTTTAAAAATaa                              >  2:2026497/1‑128 (MQ=255)
                                                                                                     aattaattTGAACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTAAA‑‑AATTTAAATATAAATTTTATTTATTTTTTTTTATAATTATAAAAAAAAAAATAAATAAAAAAATATTTTTAAAATTaaaa                            >  1:824766/1‑126 (MQ=255)
                                                                                                     aattaattTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTTAT‑‑AATGGAAATATAAATTTTATTTTTTTTTTTTTATAATTATATAAAAAAATAAAAAGAAAAAAAAATTTTTAAAATTAATaa                           >  2:1601952/1‑127 (MQ=255)
                                                                                                      atttatttttaattGTAAAAAATA‑‑‑TGTTTTTTTTTTTTTTTTTAT‑‑AATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAAATAGAAAGGAAAAAATATTGTTAAAAGTAATACTa                         <  2:1109527/116‑1 (MQ=255)
                                                                                                       ttaattTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTTAT‑‑ATTTAAAATATAAATTTTATTTTTTTTTTTGTATAATTATAAAAAAAAATAAAAATAAAAAAATATTTTAAAAATTAATaaaa                         >  1:515001/1‑125 (MQ=255)
                                                                                                        taattTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTTAT‑‑AATGGAAAAAAAAAATTTATTTATTTTTTTGTATAATTATATAAAAAAAAATAATATAAAAAATATTTTTAAAATtaataataa                        >  1:3284487/1‑128 (MQ=255)
                                                                                                        taattATAAATTGTTAAAAATATC‑‑TTTTTTTTTTTTTTTTTTAT‑‑AATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAAATAGAAAGGAAAAAATATTGTTAAAAGTAATACTaa                        <  1:1199126/128‑1 (MQ=255)
                                                                                                           tttGAACTTGTAAAAAATAGCTTTTTTTTTTTTTTTTTTTTAA‑‑ATTGGAAATTTAAATTTTTGGTTTTTTGTTGTATTTGTATATAAAATAATTGAAAGGAAAAAGTATTTTTAAAAGTATTAATaaa                       >  2:3783374/1‑128 (MQ=255)
                                                                                                             ttaaattttAAAAAATA‑‑‑TTTTTTTTTTTTTTTTTTTAT‑‑AATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAAATAGAAAGGAAAAAATATTGTTAAAAGTAATACTAAAattat                  <  1:3749424/120‑1 (MQ=255)
                                                                                                                 attttAAAAAATTTT‑TTTTTTTTTTTTTTTTTTTAT‑‑AATTGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAAATAGAAAGGAAAAAATATTGTTAAAAGTAATACTAAAATTAttt                <  1:175451/124‑1 (MQ=255)
                                                                                                                  ttttAAAAAATTTC‑TTTTTTTTTTTTTTTTTTTAT‑‑AATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAAATAGAAAGGAAAAAATATTGTTAAAAGTAATACTAAAATTATTTa               <  1:3318471/125‑1 (MQ=255)
                                                                                                                  ttttAAAAAATATC‑‑TTTTTTTTTTTTTTTTTTAT‑‑AATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAAATAGAAAGGAAAAAATATTGTTAAAAGTAATACTAAAATTATTTaa              <  1:2054876/125‑1 (MQ=255)
                                                                                                                    gTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTTAT‑‑AATGGAAATAATATTTTTATGTATTTTTTTTTAAAATTATATAAAAAAATATAAAGTAAAAAAATTTTTTAAATTTAATAAAAAAAATATTTAAtt            >  1:1903486/1‑127 (MQ=255)
                                                                                                                     tAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTTAT‑‑AATGGAAATATAAATTTTAGGTATTTTTTTTTCTAATTATATAAAAAAATAGAAAGGAAAAAATATTTTTAAAAGTAATAATAAAATTATTTAATGtt          >  1:3188957/1‑128 (MQ=255)
                                                                                                                         aaaTAGC‑‑TTTTTTTTTTTTTTTTTTAT‑‑AATGGAAAAATAAATTTTATTTTTTTTGTTTAAAAATTAAAAAAAAAAATAAAAATAAAAAAAATTTTTTAAAATAAAAAAAAAAATTATATAATTttaat       >  2:850758/1‑128 (MQ=255)
                                                                                                                           aTAGC‑TTTTTTTTTTTTTTTTTTTAT‑‑TATTTAAATATAAATTTTTGTTTTTTTTTTTTATAAATATATAAAAAAATAAAAAAAAAAAAATTTTTATAAAATTAAAAATAAAAATTTttaattttaatt      >  2:467908/1‑128 (MQ=255)
                                                                                                                           aTAGC‑TTTTTTTTTTTTTTTTTTTAT‑‑AATGTAAATATAAATTTTATTTATTTTTTTGTATAATTATAAAAAAAAATTTAAATGAAAAAATATTTTTAAAATTAATAATAAAATTATTTAATTtaaatt      >  1:2720789/1‑128 (MQ=255)
                                                                                                                           aTAGC‑‑TTTTTTTTTTTTTTTTTTAT‑‑AATGTAAATAAAAATTTTTGTTATTTTTTTTTATAATTTTAAAAAAAAAATAAAAGAAAAAAATTTTTTTAAAATAAATAATAAAATTATTTAATtttattta     >  2:383931/1‑128 (MQ=255)
                                                                                                                               |                                                                                                                                  
GATAATATTTAGTTTCATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTAAAAGAATTAATTTGAACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTTAT‑‑AATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAAATAGAAAGGAAAAAATATTGTTAAAAGTAATACTAAAATTATTTAATGTTAATTAAAA  >  CP016816/165122‑165376

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.