New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP016816 = 202486344 (0.070)800 (0.170) 113/252 29.4 67.6% intergenic (+264/‑411) JCVSYN2_00840/JCVSYN2_00845 hypothetical protein/lipoprotein
?CP016816 202490 = 424 (0.090)intergenic (+268/‑407) JCVSYN2_00840/JCVSYN2_00845 hypothetical protein/lipoprotein
Rejected: Coverage evenness skew score above cutoff.

Only 100 of 1066 total aligned reads displayed.

TAAATAATAGAGTTAAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTT‑CACAAATAAAAAAAAAACAATCCCCTTTTAAA‑AAAT‑AAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTGACATAATATATATCTAATATATATAATACTATAT  >  CP016816/202367‑202617
                                                                                                                            |                                                                                                                                 
  aataatAGAGTTAAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTT‑CACAAATAAAAAAAAAACAATCCACTTaaaaa‑aaaaa                                                                                                                            >  1:2468641/1‑126 (MQ=255)
   ataataGAGTTAAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTT‑CAAAAATAAAAAAAAAACAAACCAC‑‑Taaaa‑aaat‑aaaa                                                                                                                        >  1:3130976/1‑128 (MQ=255)
     aataGAGTTAAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTTATCTATTTTTTTATTTGTTTATCTT‑CACAAATAAAAAAAAAACAAACAC‑‑ataaaa‑aaat‑aaaaaa                                                                                                                      >  1:3548506/1‑128 (MQ=255)
     aataGAGTTAAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTT‑CACAAATAAAAAAAAAAAAATCCCC‑‑‑TAAA‑AAAT‑taaaaaa                                                                                                                     >  2:7879334/1‑128 (MQ=255)
     aataGAGTTAAGGTTAATTAAAATACCATAAACTTAATAATTATTATAATGTAGATCATATTGATCTATTTTTATATTTGTTAATATT‑CAAAAATAAAAAAAAAAAAA‑‑AACAATtaaa‑aaat‑aaaaaa                                                                                                                      >  2:7345267/1‑128 (MQ=255)
       taGAGTTAAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATTTAGATCATCGTGATCTATTTTTTTATTTTTTTATCTT‑CACAAATAAAAAAAAAAAAAACAC‑‑‑ATAAA‑AAAT‑aaaaaaaaa                                                                                                                   >  1:1336941/1‑128 (MQ=255)
       taGAGTTAAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTATATATTTGTTTATCTT‑CACAAATAAAAAAAAAACAAACCCCAT‑‑‑AA‑AAAT‑aaaaaaaaa                                                                                                                   >  2:7933860/1‑128 (MQ=255)
        agagTTAAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTATATCCTCGTGATCTATTTTTTTATTTGTTTATCTT‑CACAAATAAAAAAAAAACAATCACCTT‑‑‑AA‑AAAT‑aaaaaaaaaa                                                                                                                  >  2:1029023/1‑128 (MQ=255)
          agTTAAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTT‑CACAAATAAAAAAAAAACAATCCCC‑‑TTAAA‑AATT‑aaaaaaaaaaa                                                                                                                 >  1:8973638/1‑128 (MQ=255)
             tAAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTT‑CACAAATAAAAAAAAAACAATCCCC‑‑TTAAA‑AATT‑aaaaaaaaaaaaaa                                                                                                              >  1:10014824/1‑128 (MQ=255)
             tAAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTT‑CACAAATAAAAAAAAAACAAACCCC‑‑TTAAA‑AATT‑aaaaaaaaaaaaaa                                                                                                              >  1:1163104/1‑128 (MQ=255)
             tAAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTT‑CACAAATAAAAAAAAAAAAA‑‑ACCAATTAAA‑AAAT‑aaaaaaaaaaaaaa                                                                                                              >  1:270832/1‑128 (MQ=255)
              aaGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTT‑CACGAATAAAAAAAAAAAAATCACC‑‑TTAAA‑AATT‑aaaaaaaaaaaaaaa                                                                                                             >  2:8945890/1‑128 (MQ=255)
              aaGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTT‑CACAAATAAAAAAAAAACAAACCACAT‑‑‑AA‑AAAT‑aaaaaaaaaaaaaaaa                                                                                                            >  1:3413929/1‑128 (MQ=255)
              aaGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTT‑CACAAATAAAAAAAAAAAAAT‑‑CCAATTAAA‑AATT‑aaaaaaaaaaaaaaa                                                                                                             >  1:10458523/1‑128 (MQ=255)
              aaGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGAGATCTATTTTATTATTTAATTATATA‑AACAAAAAAAAAAAAAAAAA‑‑ACAAATAAAA‑AAAT‑aaaaaaaaaaaaaaa                                                                                                             >  1:483585/1‑128 (MQ=255)
              aaGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCATGATCTATTTTTTTATTTTTTTATATT‑AACAAATAAAAAAAAAAAAAT‑‑‑AAAATAAA‑AAAT‑taaaaaaaaaaaaaaa                                                                                                            >  1:5918274/1‑128 (MQ=255)
              aaGGTTAATTAAAATACAATAAACTTAATAATTCTTATAATGTAGATCCTCGTTATCTATTTTTTTATTTGTTTATCTT‑AACAAATAAAAAAAAAAAAATCAAATT‑‑‑AA‑AAAT‑aaaaaaaaaaaaaaaa                                                                                                            >  2:8152718/1‑128 (MQ=255)
               aGGTTAATTAAAATAACATAAAATTAATAATTATTATAATTTATATAATATTTATATATTTTATTATTTTTTTATCTT‑AACAAATAAAAAAAAAAAAATAAAC‑‑‑AAAA‑AAAT‑taaaaaaaaaaaaaaaa                                                                                                           >  2:7651806/1‑128 (MQ=255)
                gtgtaattaatATAAAATAAAATTAATAATTATTATAAATTATATAATATTTATATATTTTTTTATATTTATATATA‑AAAAAATAAAAAAAAAAAAAT‑AAAAATAAAA‑AAAT‑aaaaaaaaaaaaaaaa                                                                                                            >  1:2844679/4‑128 (MQ=255)
                ggTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTT‑CACAAATAAAAAAAAAACAATCACC‑‑‑TAAA‑AAAT‑taaaaaaaaaaaaaaaaa                                                                                                          >  2:8892657/1‑128 (MQ=255)
                ggTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTT‑CACAAATAAAAAAAAAAAAATACCC‑‑TTAAA‑AAAT‑aaaaaaaaaaaaaaaaa                                                                                                           >  2:8015560/1‑128 (MQ=255)
                ggTTAATTAAAATACCATAAACTTAATAATACTAATAATGTAGATACTCGTGATCTATTTTTTTATTTGTTTATCTT‑CAAAAATAAAAAAAAAACAATCCCAT‑‑‑‑AA‑AAAT‑aaaaaaaaaaaaaaaaaaa                                                                                                         >  1:5440912/1‑128 (MQ=255)
                  gtaattaaAATAACAAAAACATAAAAATTATTATAATTTATAAACACGTTATAAATTTTTTTATTTTTTTATATTAAAAAAAAAAAAAAAAAACAAACCCC‑‑TTAAA‑AATT‑aaaaaaaaaaaaaaaaaa                                                                                                          <  2:985519/127‑1 (MQ=255)
                   taattaaAATACCATAAACTTAATAATTCTTATAATGTATATCCTCGTGATCTATTTTTTTATTTGTTTATCTT‑CACAAATAAAAAAAAAACAAAAAAC‑‑ATAAA‑AAAT‑aaaaaaaaaaaaaaaaaaaa                                                                                                        >  2:2092972/1‑128 (MQ=255)
                   taattaaAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTT‑CACAAATAAAAAAAAAACAATCCCCTT‑‑‑AA‑AAAT‑aaaaaaaaaaaaaaaaaaaaa                                                                                                       >  1:6894785/1‑128 (MQ=255)
                   taattaaAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTT‑CACAAATAAAAAAAAAAAAAACCC‑‑‑AAAAA‑AAAT‑taaaaaaaaaaaaaaaaaaaa                                                                                                       >  1:6300623/1‑128 (MQ=255)
                   taattaaAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTT‑CACAAATAAAAAAAAAAAAAACACC‑‑‑TAAA‑AAAT‑taaaaaaaaaaaaaaaaaaaa                                                                                                       >  2:9393735/1‑128 (MQ=255)
                   taaataaaATAACATAAAATTTAATATTATTAAAATTTATAAACACGTGATATTTTTTTTTTTTTTTTTATATT‑AACAAATAAAAAAAAAAAAAACCCC‑‑TTAAA‑AATT‑taaaaaaaaaaaaaaaaaaa                                                                                                        <  2:1439736/128‑1 (MQ=255)
                    aattaaAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTT‑CACAAATAAAAAAAAAACAATCAC‑‑‑ATAAA‑AAAT‑aaaaaaaaaaaaaaaaaaaaaa                                                                                                      >  2:8332284/1‑127 (MQ=255)
                      ttaaAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTT‑CACAAATAAAAAAAAAACAATCACC‑‑TAAAA‑AATT‑aaaaaaaaaaaaaaaaaaaaaaa                                                                                                     >  1:5549713/1‑126 (MQ=255)
                         aaaTACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTT‑CACAAATAAAAAAAAAACAATCCCC‑‑TTAAA‑AATT‑aaaaaaaaaaaaaaaaaaaaaaaaaa                                                                                                  >  1:9705781/1‑123 (MQ=255)
                         aaaTACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTT‑CACAAATAAAAAAAAAACAATCACC‑‑TTAAA‑AATT‑aaaaaaaaaaaaaaaaaaaaaaaaaa                                                                                                  >  2:10181293/1‑123 (MQ=255)
                            tACCATTAATTTAAAAATTATTATATATTATCACATCGTTATAAATTTTTTTAATTTTTTAAAAT‑CACAAAATAAAAAAAAAAAATCCCCTT‑‑‑AA‑AAAT‑TAAAAAAAAAAAAAAAAAAAACTAAaaaca                                                                                              <  2:9232193/128‑1 (MQ=255)
                             aCCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTT‑CACATATAAAAAAAAAACAATCCCCTTAAAAATTAAA‑AAAAAAAAAAAAAAAAAAAAACTaaaa                                                                                                 >  1:8806609/1‑128 (MQ=255)
                              acattaaaattataatTGTTATAATGTATTACCTCCTGATGTTATTTTTTAATTGTATTTCAT‑AAAAAATAAAAAAAAAACAAACCCC‑‑AAAAA‑AATT‑AAAAAAAAAAAAAAAAAAAAACTAAaaacaa                                                                                             <  2:6639022/117‑1 (MQ=255)
                               caaaaaaTTAATAATTATTAAAAATTATCACCTATTTATTTATTTTTTTATTTTTTTATATT‑AAAAAAAAAAAAAAAAAAAAAACCCCTTAAAA‑AATA‑AAAAAAAAAAAAAAAAAAAAACTAAaaaca                                                                                              <  2:3645156/125‑1 (MQ=255)
                                ataaattatataatTCATATATTTTATATTCTTGTTTTTTTTTTTTTTTTTTTTTTATTTT‑CAAAAAAAAAAAAAAAACAAACCC‑‑‑AAAAA‑AAAT‑‑TAAAAAAAAAAAAAAAAAAACTAAAAACAAActc                                                                                         <  2:8191962/119‑1 (MQ=255)
                                   aaCTTAAAAATTATTAAAATGTACATACACGTGATCTTTTTTTTTATTTTTTTATCTT‑AACAAAAAAAAAAAAAACAATCCCCTT‑‑‑AA‑AAAT‑TAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTa                                                                                       <  2:4983672/128‑1 (MQ=255)
                                     aataaaaaTTATTAAAATTTATAACATCCTTAACTATTTTTTTAATTTTTTATAAT‑AAAAAAAAAAAAAAAAAAAAAACCC‑TTAAAA‑AATA‑AAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTa                                                                                       <  2:4525583/126‑1 (MQ=255)
                                        aataatTATTATTAATTATATAATCTTTATCTTATTTTTTATTTTTTAATATT‑AACAAATAAAAAAAAAAATATACCAATTAAAA‑ATTA‑AAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTAtt                                                                                     <  2:168348/128‑1 (MQ=255)
                                           aaatattATAATGTATATCATCATTATATATTTTTTTATTTTTTTAAAAT‑AAAAAAAAAAAAAAAAAAAAACCCC‑ATAAAA‑AATA‑AAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCtt                                                                                 <  2:9148245/123‑1 (MQ=255)
                                             atCTTATAAATTATATCCTCGTTATAAATTTTTTTATTTTTTTAAATA‑AAAAAAAAAAAAAAAAAAAAACCCC‑‑TTAAA‑AATT‑AAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTaaa                                                                              <  2:7241106/127‑1 (MQ=255)
                                                   aaaattattaacTCGTTATCTATTTTTTTATTTTTTTATTTT‑AAAAAAAAAAAAAAAAACAATCCCCTT‑‑‑‑A‑AAA‑‑AAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCtat                                                                     <  1:2069361/117‑1 (MQ=255)
                                                       ttatatcatagTGATATATTTTTTTATTTTTTTATATT‑AAAAAATAAAAAAAAAACAATCCCC‑‑TTAAA‑AATT‑AAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCtatt                                                                    <  2:228262/118‑1 (MQ=255)
                                                         tgATCCCCGTGTTCTATTTTTTTATTTTTTTATCTA‑CACAAAAAAAAAAAAAACAAACCCC‑‑ATAAA‑AAA‑‑AAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATtata                                                                 <  1:8549668/127‑1 (MQ=255)
                                                           aaactagttatatATTTTTTTTTTTTTTTATATT‑AAAAAAAAAAAAAAAAAAAATCCCCTTAAAAA‑TTAA‑AAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCtattat                                                                  <  2:8836449/116‑1 (MQ=255)
                                                            tactgttGATATATTTTTTT‑TTTTTTTATAAT‑TAAAAAAAAAAAAAAAAAAAAAACC‑CAAAAA‑AAAT‑‑AAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACca                                                              <  1:957519/122‑1 (MQ=255)
                                                            aacttttttataatttttttatttttttA‑ATT‑TAAAAAAAAAAAAAAAAAAAAAACCATTAAAA‑ATTA‑AAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATAc                                                                <  2:905913/116‑1 (MQ=255)
                                                             tctattGATCTATTTTTTTATTTTTTTAAAAT‑TAAAAAAAAAAAAAAAAAAATCCCC‑‑TTAAA‑AAAT‑AAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACca                                                              <  2:3507732/123‑1 (MQ=255)
                                                             ctttttttttattttttttatttttttaAATT‑AACAAATAAAAAAAAAAAAATCAC‑‑ATTAAA‑AAAT‑AAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACca                                                              <  1:9181336/116‑1 (MQ=255)
                                                             catctttatatatttttttattttttAATATT‑AAAAAAAAAAAAAAAAAAAATCCCC‑‑TTAAA‑AATT‑AAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACca                                                              <  2:2660990/118‑1 (MQ=255)
                                                             acattttttCTATTTTTTTTTTTTTTTATATT‑AAAAAAAAAAAAAAAAAAAAAACCC‑‑TTAAA‑AATT‑AAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACca                                                              <  2:9738782/120‑1 (MQ=255)
                                                              ctagttatttatttttttattttttTAAATT‑CAAAAATAAAAAAAAAAAAATCCCC‑‑TTAAA‑AATT‑AAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACcac                                                             <  1:8907076/119‑1 (MQ=255)
                                                                 ttatttattttttttATTT‑TTTATAAT‑AAAAAATAAAAAAAAAAAAAAACCC‑‑ATAAA‑AAAT‑AAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACattt                                                         <  2:10409841/120‑1 (MQ=255)
                                                                  ttatatttttttttatttttttaTATT‑CACAAAAAAAAAAAAAACAATCCCATTT‑‑AA‑AATT‑AAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACattt                                                         <  2:1865474/121‑1 (MQ=255)
                                                                  ttatatatttttttattttttTATATT‑AAAAAAAAAAAAAAAAAAAATCCCC‑‑TTAAA‑AATT‑AAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACattt                                                         <  2:3737489/123‑1 (MQ=255)
                                                                  ttaaatATTTTTTTAATTTTTTATAAT‑AAAAAAAAAAAAAAAAACAAAACCC‑TTAAAA‑ATTA‑AAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACatt                                                          <  2:2897633/123‑1 (MQ=255)
                                                                   tatatatttttttattttttTAAATT‑AAAAAAAAAAAAAAAAAAAATAACAAT‑‑‑AA‑AAAT‑TAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACatttta                                                       <  2:4260940/124‑1 (MQ=255)
                                                                       tttttttttATTTGTTTATATT‑AAAAAATAAAAAAAAAAAAATACCC‑‑TTAAA‑AAAT‑‑AAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACattttattgt                                                   <  1:8399619/126‑3 (MQ=255)
                                                                       tatttttttattttttTATATT‑AAAAAAAAAAAAAAAAAAAAACCCCTT‑‑‑AA‑AAAT‑TAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACattttatttt                                                   <  2:3016212/128‑1 (MQ=255)
                                                                       attttttttAATTTTTTAAATA‑AAAAAAAAAAAAAAAAAAAAACCCCTT‑‑‑AA‑AAAT‑TAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACattttatttt                                                   <  2:4076482/126‑1 (MQ=255)
                                                                         tttttttatttttttaTATT‑TAAAAAAAAAAAAAAAAAAAAAACCCATAAAA‑AATA‑AAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACattttattt                                                    <  1:8298100/128‑1 (MQ=255)
                                                                         tttttttatttttttaTATT‑AAAAAAAAAAAAAAAAAAAATCCCC‑‑ATAAA‑AATT‑AAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTAttttt                                                  <  2:1228399/128‑1 (MQ=255)
                                                                          ttttttatttttttatATT‑AACAAATAAAAAAAAAAAAAACACC‑‑TTAAA‑AAAT‑‑AAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTaa                                                <  1:7875913/128‑1 (MQ=255)
                                                                          ttttttatttttttatAAT‑AAAAAAAAAAAAAAAAAAAAACCCC‑‑TTAAA‑AATT‑AAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTa                                                 <  2:10014824/128‑1 (MQ=255)
                                                                             ttttttTGTTTTTATT‑‑AAAAAAAAAAAAAAAAAAAAACCCATTAAAA‑ATAA‑AAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTaaa                                               <  2:5588550/128‑1 (MQ=255)
                                                                             tttATTTGTTTATTAT‑AAAAAAAAAAAAAAAAAAAATCACC‑‑TTAAA‑AATT‑AAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTaaaa                                              <  1:10211581/128‑1 (MQ=255)
                                                                               tATTTTTTTATATT‑AAAAAAAAAAAAAAAAAAAATACC‑‑ATTAAA‑AATT‑AAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATa                                            <  2:7038860/128‑1 (MQ=255)
                                                                                  ttttttATATT‑AAAAAAAAAAAAAAAAACAAATCCC‑‑TTAAA‑AATT‑AAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGa                                         <  1:8654292/125‑1 (MQ=255)
                                                                                   tttttATATT‑TAAAAAAAAAAAAAAAAAAAAAACCTTT‑‑‑A‑AAAT‑AAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGata                                       <  2:935476/126‑1 (MQ=255)
                                                                                   tttttATATT‑CAAAAAAAAAAAAAAAACAATCCCCTT‑‑‑AA‑AAAT‑TAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGata                                       <  1:9915369/126‑1 (MQ=255)
                                                                                   tttttATATT‑AAAAAAAAAAAAAAAAAAAAT‑ACCATTAAAA‑ATTA‑AAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGa                                         <  2:3274043/126‑1 (MQ=255)
                                                                                     tttATATT‑AAAAAAAAAAAAAAAAAAAATACCC‑‑TTAAA‑ATAT‑‑AAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATAtt                                     <  2:688183/128‑1 (MQ=255)
                                                                                      tttatgataaaaaaTAAAAAAAAAAAAAAACACTT‑‑‑AA‑AAAT‑TAAAAAAAAAATAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATAtt                                     <  2:3154341/117‑1 (MQ=255)
                                                                                      tttaaattaaaaaaaaaaaaaaaaaaaATACCC‑ATAAAA‑AATA‑AAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGata                                       <  2:2467597/117‑1 (MQ=255)
                                                                                      ttATATT‑AACAAAAAAAAAAAAAACAATCCC‑‑‑ATAAA‑AAAT‑‑‑‑TAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTGACa                                 <  2:8491376/128‑1 (MQ=255)
                                                                                       tATCTT‑CACAAATAAAAAAAAAACAATCCCC‑‑TTAAA‑AATT‑AAAAAAAAAAAAAAAAAAAAA‑TAAAAAAAAAATATATTTATTAAAATTCCTAATTAAACCAAATTTTATTTTAAAAAATATATATTGa                                   >  1:9417053/1‑128 (MQ=255)
                                                                                        tttatattaaaaaaaaaaaaaaaaaATACC‑‑ATTAAA‑AATT‑AAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTg                                    <  2:6268708/119‑1 (MQ=255)
                                                                                         tatt‑CAAAAATAAAAAAAAAAAAATACCCTT‑‑‑AA‑AAAT‑‑‑‑TAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTGACataa                              <  2:9501291/126‑1 (MQ=255)
                                                                                            attaaaaaaaaaaaaaaaaaaaaaaCCA‑TTAAA‑AATT‑AAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTGACa                                 <  2:4825332/123‑1 (MQ=255)
                                                                                              aaaaaaaaaaaaaaaaaaaATCCCC‑‑TTAAA‑AATT‑AAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTGACataa                              <  2:1080800/125‑1 (MQ=255)
                                                                                              aaaaaaaaaaaaaaaaaCAATAACC‑‑TTAAA‑AATT‑AAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTGACataa                              <  2:8098567/125‑1 (MQ=255)
                                                                                                caAATAAAAAAAAAAAAAT‑CCCATTAAAA‑ATTA‑AAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTGACataat                             <  2:8629952/128‑1 (MQ=255)
                                                                                                   aTAAAAAAAAAATAATAGCC‑TTAAAA‑ATAA‑AAAAAATAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTGACATAatata                          <  1:7972680/128‑1 (MQ=255)
                                                                                                             aaaaaaatacacttaaa‑aatt‑aaaaaAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTGACATAATATATATCTAata                 <  1:9123319/116‑1 (MQ=255)
                                                                                                              aaaaaataaacttaaa‑aatt‑aaaaaAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTGACATAATATATATCTAatat                <  2:7801039/117‑1 (MQ=255)
                                                                                                               aaaaatacacttaaa‑aatt‑aaaaaAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTGACATAATATATATCTAatata               <  1:8148486/118‑1 (MQ=255)
                                                                                                                 aaaaatagttAAA‑AAAT‑ATATATAAAAAATATAAAAAA‑TAAAAACAACCTCTATTTCTTAAAATTCACTATTATACCACATTTTATTTTTAAAATAAGATATTGACATAAAATATATCTAatatatat            <  2:5242524/120‑1 (MQ=255)
                                                                                                                  aataccattaaa‑aatt‑aaaaaAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTGACATAATATATATCTAatatatat            <  2:5875970/121‑1 (MQ=255)
                                                                                                                  aaatacccaaaa‑aaat‑taaaaaAAAAAAAAAAAAAAACTAAAAACAAACTCAATTTCTTAAAATTACCTATTATACCACATTTTATTTTTAAAATAAGATATTGACATAATATATATCTAatatatat            <  1:8049373/119‑1 (MQ=255)
                                                                                                                  aaatacaataaa‑aata‑aaaaaaAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTGACATAATATATATCTAatatatat            <  2:57603/120‑1 (MQ=255)
                                                                                                                  aaacacaataaa‑aaaa‑taaaaaaaAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTGACATAATATATATCTAatatatat            <  2:5523314/120‑1 (MQ=255)
                                                                                                                  aaacaaataaaa‑aatt‑aaaaaaAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTGACATAATATATATCTAatatatat            <  1:10117859/119‑1 (MQ=255)
                                                                                                                     accattaaa‑aattaaaaaAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTGACATAATATATATCTAATATATataa          <  2:9617737/124‑1 (MQ=255)
                                                                                                                       catttaa‑aaat‑aaaaaaAAAAAAAAAAAAAAACTAAAAACAAAATCTATTTCTTAAAATTCACTATTATAAAACATTTTATTTTTAAAATAAGATATTGACATAATATATATCTAATATATATAATAc       <  2:6139111/123‑1 (MQ=255)
                                                                                                                       atttAAA‑ATTA‑AAAAAAAAAAAAAAAAAAAAACTAAAAACAAAATCTATTTCTTAAAATTACCTATTATACCACATTTTATTTTTAAAATAAGATATTGACATAATATATATCTAATATATATAATAc       <  2:3853289/127‑1 (MQ=255)
                                                                                                                       aaaataa‑aaat‑taaaaaAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTGACATAATATATATCTAATATATATAATAc       <  1:3965081/123‑1 (MQ=255)
                                                                                                                         ttaaa‑aatt‑aaaaaAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTGACATAATATATATCTAATATATATAATACta     <  2:6448169/128‑1 (MQ=255)
                                                                                                                            aa‑aaat‑ttaaaaAAAAAAAAAAAAAAAATAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTGACATAATATATATCTAATATATATAATACTatat  <  2:8731489/128‑1 (MQ=255)
                                                                                                                            |                                                                                                                                 
TAAATAATAGAGTTAAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTT‑CACAAATAAAAAAAAAACAATCCCCTTTTAAA‑AAAT‑AAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTGACATAATATATATCTAATATATATAATACTATAT  >  CP016816/202367‑202617

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.