New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP016816 = 202486113 (0.080)267 (0.180) 84/252 14.4 68.9% intergenic (+264/‑411) JCVSYN2_00840/JCVSYN2_00845 hypothetical protein/lipoprotein
?CP016816 202490 = 128 (0.090)intergenic (+268/‑407) JCVSYN2_00840/JCVSYN2_00845 hypothetical protein/lipoprotein
Rejected: Coverage evenness skew score above cutoff.

Only 100 of 351 total aligned reads displayed.

ATAATAGAGTTAAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTA‑TTTTTTTATTTGTTT‑ATCTTCAC‑AAATAAAAAAAAAACAATCCCCTTTTAAA‑AAAT‑‑AAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTGACATAATATATATCTAATATATATAATACTATAT  >  CP016816/202370‑202617
                                                                                                                           |                                                                                                                                  
    tttattttattttaaataaAAAAACATAAACTTTATAATTTTTTAAATTTATATTCTTGTTTTATT‑TTTTTTTTTTTGTTT‑TTTTTAAA‑AAATAAAAAAAAAACAATCCCC‑‑TTAAA‑AATT‑‑aaaaaaaa                                                                                                                    <  1:1645505/117‑1 (MQ=255)
        gTTAAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTA‑TTTTTTTATTTGTTT‑ATCTTCAC‑AAATAAAAAAAAAACAAACCCCAT‑‑‑AA‑AAAT‑‑aaaaaaaaaaaaa                                                                                                               >  1:1795579/1‑128 (MQ=255)
         ttAAGGTTAATTAAAATACCATAAACTTAATAAATCTTATAATTTATATCATCTTTATCTA‑ATTTATTATTTTTTT‑ATCTTCAC‑AAATAAAAAAAAAAAAAAAAC‑‑‑ATAAA‑AAAT‑‑aaaaaaaaaaaaaa                                                                                                              >  2:412607/1‑128 (MQ=255)
          tAAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTA‑TTTTTTTATTTGTTT‑ATCTTCAC‑AAATAAAAAAAAAACAATCCAC‑‑TTAAA‑AAAT‑‑aaaaaaaaaaaaaa                                                                                                              >  1:2521932/1‑128 (MQ=255)
          tAAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTA‑‑TATTTTATATTTTT‑ATCTTCAC‑AAATAAAAAAAAAAAAAACACATAaaaaa‑aaaa‑‑aaaaaaaaaaaaa                                                                                                               >  1:2011260/1‑128 (MQ=255)
           aaGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTA‑TTTTTTTATTTGTTT‑ATCTTCAC‑AAATAAAAAAAAAACAATCCCC‑‑TTAAA‑AATT‑‑taaaaaaaaaaaaaa                                                                                                             >  1:2615315/1‑128 (MQ=255)
           aaGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTA‑TTTTTTTATTTGTTT‑ATCTTCAC‑AAATAAAAAAAAAACAATCCCC‑‑TTAAA‑AATT‑‑aaaaaaaaaaaaaaa                                                                                                             >  2:2644535/1‑128 (MQ=255)
           aaGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTA‑TTTTTTTATTTGTTT‑ATCTTCAC‑AAATAAAAAAAAAAAAAAACAATT‑‑‑AA‑AAAT‑‑aaaaaaaaaaaaaaaa                                                                                                            >  1:1007304/1‑128 (MQ=255)
            aGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTA‑TTATTTTATTTGTTT‑ATCTTCAC‑AAATAAAAAAAAAACAATCCAC‑‑‑TAAA‑AAAT‑‑aaaaaaaaaaaaaaaaa                                                                                                           >  2:1645201/1‑128 (MQ=255)
             ttttaattaaAATAAAAAAAAAATAAAAAATAATATAATTTATATCCTCGTGAACTA‑TTTTTTTATTTTTTT‑ATATTAAA‑AAAAAAAAAAAAAACAATCCCC‑‑ATAAA‑AATT‑‑aaaaaaaaaaaaaaaaa                                                                                                           <  2:786421/126‑1 (MQ=255)
             ggTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTATATCCTCTTTATCTA‑TTTTTTTATTTTTTT‑ATATTAAC‑AAATAAAAAAAAAAAAAT‑‑‑AAAATAAA‑AAAT‑‑aaaaaaaaaaaaaaaaaa                                                                                                          >  2:579191/1‑128 (MQ=255)
             ggTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCTTGATCTA‑TTTTTTTATTTGTTT‑ATCTTCAC‑AAATAAAAAAAAAACAATCCAC‑‑TTAAA‑AATT‑‑aaaaaaaaaaaaaaaaa                                                                                                           >  2:2499293/1‑128 (MQ=255)
             ggTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTA‑TTTTTTTATTTGTTT‑ATCTTCAC‑AAATAAAAAAAAAACAATCCCC‑‑TTAAA‑AATT‑‑aaaaaaaaaaaaaaaaa                                                                                                           >  1:351736/1‑128 (MQ=255)
             ggTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTA‑TTTTTTTATTTGTTT‑ATCTTCAC‑AAATAAAAAAAAAACAATCCCC‑‑TTAAA‑AATT‑‑aaaaaaaaaaaaaaaaa                                                                                                           >  1:2746356/1‑128 (MQ=255)
             ggTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTA‑TTTTTTTATTTGTTT‑ATCTTCAC‑AAATAAAAAAAAAACAATAACCaaaaaaa‑aaaa‑‑aaaaaaaaaaaaaaa                                                                                                             >  1:1487684/1‑128 (MQ=255)
             ggTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTA‑TTTTTTTATTTGTTT‑ATCTTCAC‑AAATAAAAAAAAAAAAAACAC‑‑‑AAAAA‑AAAT‑‑aaaaaaaaaaaaaaaaaa                                                                                                          >  1:69321/1‑128 (MQ=255)
             ggTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTA‑TTTTTTTATTTGTTT‑ATCTTCAC‑AAATAAAAAAAAAAAAAAACCAATT‑‑AA‑AAAT‑‑aaaaaaaaaaaaaaaaa                                                                                                           >  1:2650444/1‑128 (MQ=255)
             ggTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGAGATCTA‑ATTTTTTATTTATAT‑ATCATCAC‑AAATAAAAAAAAAAAAAACCCAAT‑‑‑AA‑AAAT‑‑aaaaaaaaaaaaaaaaaa                                                                                                          >  1:190036/1‑128 (MQ=255)
              gtttaataaaataaaaAAAAAATAAAAATTCTAAAAAATTAAATACTCTTTATATA‑TTTTTTTAATTTTTT‑AAATTCAA‑AAAAAAAAAAAAAAAAAACCCC‑‑ATAAA‑AATT‑‑aaaaaaaaaaaaaaaaaa                                                                                                          <  2:140350/122‑1 (MQ=255)
              gTTAAATAAAAAAAAAAAAAATTAAAAATTATTATAATTTATTTCCCCGGTTTATA‑TTTTTTTTTTTGTTT‑ATAATAAA‑AAAAAAAAAAAAAAAAAACCCC‑‑TTAAA‑AATT‑‑aaaaaaaaaaaaaaaaaa                                                                                                          <  1:843765/128‑1 (MQ=255)
                  attaaAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCTTGATCTA‑TTTTATTATTTGTTT‑ATCTTCAC‑AAATAAAAAAAAAAAAATCACCTTAAAAA‑TAaa‑‑aaaaaaaaaaaaaaaaaaaa                                                                                                        >  1:1246750/1‑128 (MQ=255)
                  attaaAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTA‑TTTTATTATTATTTT‑ATATTCAC‑AAATAAAAAAAAAAAAA‑‑ACCAATAAAA‑AATT‑‑aaaaaaaaaaaaaaaaaaaaaa                                                                                                      >  1:567076/1‑127 (MQ=255)
                  attaaAATACCATAAACTAAATAATTCTTATAATGTAGATACACTTGATCTA‑TTATTTTATTTCTTT‑ATATTCAC‑AAATAAAAAAAAAAAAAACAC‑‑AATAAA‑AAAT‑‑aaaaaaaaaaaaaaaaaaaaaa                                                                                                      >  1:3177480/1‑127 (MQ=255)
                    taaAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTA‑TTTTTTTATTTGTTT‑ATCTTCAA‑AAATAAAAAAAAAACAATCCAC‑‑‑TAAA‑AAAT‑‑TAAAAAAAAAAAAAAAAAAAAATaa                                                                                                   >  1:1701413/1‑128 (MQ=255)
                     aaaaaaacttAAAATTAATAATTATTAAAAAGTTCATCATCG‑GTTATATTTTTTTTATTTTTTT‑TTATTAAC‑AAA‑AAAAAAAAAAAAAACCCC‑‑TTAAA‑AAAT‑‑AAAAAAAAAAAAAAAAAAAAACTaaa                                                                                                  <  1:2864008/119‑1 (MQ=255)
                      aaaaACCATAAAATTAATTAATCATAAAATTTACTTACTTGTGATCTT‑TTTTTTAATTTTTTT‑ATCTTCAA‑AAAAAAAAAAAAAACAAACCCC‑‑TTAAA‑AATT‑‑AAAAAAAAAAAAAAAAAAAAACTaaa                                                                                                  <  2:2746393/128‑1 (MQ=255)
                      aaaTACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTA‑TTTTTTTATTTGTTT‑ATCTTCAC‑AAATAAAAAAAAAACAAACCCC‑‑TTAAA‑AATT‑‑aaaaaaaaaaaaaaaaaaaaaaaaaa                                                                                                  >  1:1623399/1‑123 (MQ=255)
                      aaaTACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTA‑TTTTTTTATTTGTTT‑ATCTTCAC‑AAATAAAAAAAAAACAAAACCC‑‑TTAAA‑AATT‑‑aaaaaaaaaaaaaaaaaaaaaaaaaa                                                                                                  >  1:2716511/1‑123 (MQ=255)
                       aaTACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTA‑TTTTTTTATTTGTTT‑ATCTTCAC‑AAATAAAAAAAAAACAATCCCC‑‑TTAAA‑AATT‑‑Aaaaaaaaaaaaaaaaaaaaaaaaaaa                                                                                                 >  2:2422444/1‑128 (MQ=255)
                       aaTACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTA‑TTTTTTTATTTGTTT‑ATCTTCAC‑AAATAAAAAAAAAACAATCCC‑‑ATTAAA‑AATT‑‑Aaaaaaaaaaaaaaaaaaaaaaaaaaa                                                                                                 >  1:331876/1‑128 (MQ=255)
                        aaaacataaacataaaAATTCTTAAAATTTAGATCATCTTTTTATA‑TTTTTTTATTTTTTT‑ATCTTAAA‑AAAAAAAAAAAAAAAAAACCCC‑‑TTAAA‑AATT‑‑AAAAAAAAAAAAAAAAAAAAACTaaaaa                                                                                                <  1:1104681/124‑1 (MQ=255)
                        aaaaaaTAAAAATAATAATTTTTAAAATTTTTAATCTCGTGTTTTA‑TTTTTTTTTTTTTTT‑ATATTAAA‑AAAAAAAAAAAAAAAAAATCCC‑CTTAAA‑AATT‑‑AAAAAAAAAAAAAAAAAAAAACTaaaa                                                                                                 <  1:2566646/123‑1 (MQ=255)
                         tACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTA‑TTTTTTTATTTGTTT‑ATCTTCAC‑AAATAAAAAAAAAACAATCCCC‑‑TTAAA‑AATT‑‑AAAAAAAAAAAAAAAAAAAAAATAAaaac                                                                                               >  1:3063722/1‑128 (MQ=255)
                              tAAAATAAATAAATAATAAAATGTACATACTCGTTATATA‑TTATTTTATTTTTTT‑AACATCAC‑AAAAAAAAAAAAAACAAACCCC‑‑TTAAA‑AATT‑‑AAAAAAAAAAAAAAAAAAAAACTAAAAACAAAct                                                                                          <  2:1283524/128‑1 (MQ=255)
                                aaCTTAATAATTATTATAAATTATAACCTAGTGATCTA‑TTTTTTTTTTTGTTT‑ATAATAAA‑AAAAAAAAAAAAAAAAATCCCC‑‑TTAAA‑AAAT‑‑‑AAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTa                                                                                       <  2:3027901/128‑1 (MQ=255)
                                 aCTTAATAATTATTATAAATTACATACTCGTTTTATA‑TTTTTTTATTTTTTT‑ATATTAAA‑AAAAAAAAAAAAAAAAATCCCC‑‑TTAAA‑AATT‑‑AAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTa                                                                                       <  2:51903/128‑1 (MQ=255)
                                     tataatTCTTATAATTTATATTATCGTTTTTTT‑ATTTTTTATTTTTTT‑ATATTTAA‑AAAAAAAAAAAAAAAAATACCCTT‑‑‑AA‑AAAT‑‑TAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCt                                                                                  <  2:2893562/127‑1 (MQ=255)
                                                    gTAGATCCTCGTGATCTA‑TTTTTTTATTTGTTT‑ATCTTCAC‑AAATAAAAAAAAAACAATCCCC‑‑TTAAA‑AATT‑‑AAAAATAAAAAAAAAAAAAAA‑TAAAAACAAAAATTATATATTAAAAtgacatatat                                                                   >  2:2395253/1‑119 (MQ=255)
                                                      aGATCCTCGTGATCTA‑TTTTTTTATTTGTTT‑ATCTTCAC‑AAATAAAAAAAAAACAATCCCC‑‑TTAAA‑AATT‑‑AAAAAAAAAAAAAAAAAAAAA‑‑AAAAACAAACTAAATTTATAAAAATACACTATTATAc                                                                >  1:2733835/1‑128 (MQ=255)
                                                         taatctttatatA‑TTTTTTAATTTTTTT‑ATCATAAA‑AAAAAAAAAAAAAACAATACC‑‑ATTAAA‑AATT‑‑AAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATAcc                                                               <  2:2990024/117‑1 (MQ=255)
                                                         actacttttttta‑tttttttattttttT‑ATAATAAA‑AAAAAAAAAAAAAAAAAATCCCCTT‑‑AA‑AAAT‑‑TAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATAcc                                                               <  2:387584/117‑1 (MQ=255)
                                                          aatctttatata‑tttttttattttttT‑ATATTAAA‑AAAAAAAAAAAAAAAAATCCCC‑‑TTAAA‑AATT‑‑AAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACca                                                              <  2:1357047/118‑1 (MQ=255)
                                                            tagttaaatA‑TTTTTTAATTTTTTT‑AAATTCAA‑AAAAAAAAAAAAAAAAAACCAC‑‑ATAAA‑AATT‑‑AAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACcaca                                                            <  2:1783440/120‑1 (MQ=255)
                                                            cgagtgtttatttttttttttttttT‑AAATTTAA‑AAAAAAAAAAAAAAAAAAACCCTT‑‑‑AA‑AAAT‑‑TAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACcaca                                                            <  1:2907312/117‑1 (MQ=255)
                                                            atgttatatA‑TTTTTTTTTTTTTTT‑ATATTAAA‑AAAAAAAAAAAAAAAAAAACCCTTAAAAA‑TAAA‑‑AAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACca                                                              <  2:1512194/120‑1 (MQ=255)
                                                            atatttttattttttttttttttttT‑ATATTAAA‑AAATAAAAAAAAAAAAATACCCTT‑‑‑AA‑AAAT‑‑TAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACcaca                                                            <  2:26110/117‑1 (MQ=255)
                                                             tttttaaaatatttattATTTTTTT‑AAATAAAA‑AAAAAAAAAAAAAAAAAACCCCTTAAAAA‑TTAA‑‑AAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACca                                                              <  2:546740/117‑1 (MQ=255)
                                                             agttttata‑tttttttattttttT‑ATTATAAA‑AAAAAAAAAAAAAAAAAACCCC‑‑TTAAA‑AATT‑‑AAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACat                                                           <  1:2548123/121‑1 (MQ=255)
                                                              ttttttaattttttttATTTTGTT‑ATTTTCAA‑AAATTAAAAAAATATAATACCCTTAAAAA‑TTAT‑‑AAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACcac                                                             <  1:2832070/119‑1 (MQ=255)
                                                              tttttatA‑TTTTTTTTTTTTTTT‑ATATTTAA‑AAAAAAAAAAAAAAAAATACC‑‑ATTAAA‑AATT‑‑AAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACatt                                                          <  2:1936362/122‑1 (MQ=255)
                                                              tttataaa‑TTTTTTAATTTTTTT‑ATAATAAA‑AAAAAAAAAAAAAAAAAACAC‑‑ATTAAA‑AATT‑‑AAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACatt                                                          <  2:3150610/121‑1 (MQ=255)
                                                              ggatattA‑TTTTTTTTTTTTTTT‑ATGATCAA‑AAAAAAAAAAAAAAAAAACCACAT‑‑‑AA‑AAAT‑‑TAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACattt                                                         <  1:3134443/122‑1 (MQ=255)
                                                               tgttatatttttttttttttttT‑ATTTATAA‑AAATAAAAAATATA‑AATTACC‑‑TTAAA‑AAAT‑‑TAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACattt                                                         <  2:1713310/120‑1 (MQ=255)
                                                               tGATTTT‑TTTTTTTATTTTTTT‑ATATTAAA‑AAAAAAAAAAAAAAAAAACCCC‑‑TTAAA‑AATT‑‑TAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACattt                                                         <  2:1091406/128‑1 (MQ=255)
                                                                tttata‑tttttttattttttT‑ATATTAAA‑AAATAAAAAAAAAAAAATACCC‑TTAAAA‑ATTA‑‑AAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACattt                                                         <  2:1112201/124‑1 (MQ=255)
                                                                 ttattaattttttATTTTTTT‑TTATTAAA‑AAAAAAAAAAAAAAAAATACCC‑TTAAAA‑ATAA‑‑AAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACattt                                                         <  2:2718521/121‑1 (MQ=255)
                                                                 ttatA‑TTTTTTTTTTTTTTT‑TTATATAA‑AAAAAAAAAAAAAAAAAAAATCCTCTAAA‑AAA‑‑‑ATAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACatttt                                                        <  2:2927366/125‑1 (MQ=19)
                                                                 atata‑tttttttattttttT‑ATATAAAA‑AAATAAAAAAAAAAAAATAACC‑‑TTAAA‑AATT‑‑AAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACatttta                                                       <  2:1454284/125‑1 (MQ=255)
                                                                  taaa‑tttttttattttttt‑AAATT‑AA‑AAAAAAAAAAAAAAAAAAACCCATTAAAA‑ATTA‑‑AAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACatttta                                                       <  2:3209572/125‑1 (MQ=255)
                                                                  attttttttttttATTGTTT‑ATAATAAA‑AAAAAAATAAAAAAAAAACCCCTAAAAAA‑TTAA‑‑AAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACattt                                                         <  1:2055350/123‑1 (MQ=255)
                                                                    tA‑TTTTTTTTTTTTTTT‑TTTTTTAA‑AAAAAAAAAAAAAAAAAAACACTT‑‑‑AA‑AAAT‑‑TAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACattttatttt                                                   <  2:494837/128‑1 (MQ=255)
                                                                     attttttttATTT‑TTA‑AAATTAAA‑AAAAAAAAAAAAAAAAAAACC‑‑ATTAAA‑AATA‑‑AAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACattttatttt                                                   <  2:2219029/126‑1 (MQ=255)
                                                                     a‑TTTTTTTTTTTTTTT‑TTTTTAAA‑AAATAAAAAAAAAA‑AATTACCATT‑‑AA‑AAAT‑‑TAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTAttttt                                                  <  2:2292918/128‑1 (MQ=255)
                                                                       tttttttattttttt‑aTATTAAA‑AAAAAAAAAAAAAAAAATCCCCTTT‑‑AA‑AATT‑‑AAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTAttttt                                                  <  2:2095933/128‑1 (MQ=255)
                                                                        tttttttttttttt‑ttttTAAA‑AAATAAAAAAAAATAAATTTCC‑TTTAAA‑TTTT‑‑AAATAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTACCTATTATACCACATTTTAttttt                                                  <  1:750351/128‑1 (MQ=255)
                                                                        ttttttattttttt‑atTATAAA‑AAAAAAAAAAAAAAAAAAACCCATT‑‑AA‑AAAT‑‑AAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTa                                                 <  1:2768213/128‑1 (MQ=255)
                                                                        ttttttATTTGTTTAATTTAAAA‑AAAAAAAAAAAAAACAATCCCCTT‑‑‑AA‑AAAT‑‑TAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTa                                                 <  2:910056/128‑1 (MQ=255)
                                                                         tttttATTTTTTT‑AAATAAAA‑AAAAAAAAAAAAAAAAAAACCCTTAAAAA‑ATAA‑‑AAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTAttttt                                                  <  2:2832278/128‑1 (MQ=255)
                                                                          ttttattt‑ttt‑attTTAAAAAAAAAAAAAAAAAAAAAAAACCTAAAAAA‑TAAA‑‑AATAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTa                                                 <  1:761612/128‑1 (MQ=255)
                                                                           tttATTTGTTT‑ATCTTCAC‑AAATAAAAAAAAAACAATCCCC‑‑TTAAA‑AATT‑‑AAAAAAAAAAAAAAAAAAAAAATAAAAACAAAAGCAATTTATAAAAATTCCATATATAACCACAATTTTTTTTTtaaa                                              >  2:2550699/1‑128 (MQ=255)
                                                                            tttttttttT‑ATTTTTAA‑AAATAAAAAAAAAAAAATAAAC‑TTAAAA‑ATTA‑‑AAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTaaaa                                              <  1:1550188/125‑1 (MQ=255)
                                                                             tttattttt‑ATATTAAC‑AAATAAAAAAAAAACAAAACCCAT‑‑‑AA‑AAAT‑‑TAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATaa                                           <  2:623100/122‑1 (MQ=255)
                                                                              aTTTGTTT‑ATCTTCAC‑AAATAAAAAAAAAACAATCCCCTT‑‑‑AA‑AAAT‑‑TAAAAAAAAAAAAAAAAAAAA‑‑AAAAACAAAATAAATTTATTAAAATAACATATTATACAACATTTTATTTTTaaaataaaat                                        >  2:2858006/1‑128 (MQ=255)
                                                                                tttttt‑ATATTAAA‑AAAAAAAAAAAAAAAAATACCC‑‑TTAAA‑AATT‑‑AAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGa                                         <  2:357453/125‑1 (MQ=255)
                                                                                tttttt‑ATATTAAA‑AAAAAAAAAAAAAAAAATAAC‑‑ATTAAA‑AATT‑‑AAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGa                                         <  2:3171651/125‑1 (MQ=255)
                                                                                    tttttttttaaaaaaTAAAAAAAAAAAAATACCC‑‑TTAAA‑AATT‑‑AAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGata                                       <  1:396018/116‑1 (MQ=255)
                                                                                     ttttaattaaaaaaaaaaaaaaaaaaaATTCCCTTAAAAA‑TTAA‑‑AAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGat                                        <  2:731451/117‑1 (MQ=255)
                                                                                     t‑ATCTACAC‑AAATAAAAAAAAAACAAACCCCTT‑‑‑AA‑AAAT‑‑TAAAAAAAAAAAAAAAAAAAACAAAAAACAAAATATATTATATAAAATAAAATATTTTAAAACTTTTAATTTTTAAAATAATAAAttat                                   >  1:2455517/1‑126 (MQ=255)
                                                                                      taaaaataaaaaaaaaaaaaaaaaCAATACC‑‑ATTAAA‑AAAT‑‑AAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATAtt                                     <  1:1210251/118‑1 (MQ=255)
                                                                                            tac‑aAAAAAAAAAAAAAAAAACACATTAAAAATTAAT‑‑AATAAAAAAAAAAAAAAAAAATTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTGACa                                 <  2:2685811/127‑1 (MQ=255)
                                                                                            taaaaaaaaaaaaaaaaaaaATCACATT‑‑‑AA‑AAAT‑‑TAAAAAAAAAAAAAAAAAAAAGTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTGACataa                              <  1:2990359/124‑1 (MQ=255)
                                                                                              aaaaaaaaaaaaaaaaaaATCACATTAAAAA‑TTAA‑‑AAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTGACata                               <  2:1481280/126‑1 (MQ=255)
                                                                                               aaaaaaaaaaaaaaaaaATACCC‑‑ATAAA‑AAAT‑‑‑‑AAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTGACATAatata                          <  2:3202686/127‑1 (MQ=255)
                                                                                                aaaaaaaaaaaaaaaaATCCAATT‑‑‑AA‑AAAT‑‑AAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTGACATAatata                          <  2:1583999/128‑1 (MQ=255)
                                                                                                  aaaaaaaaaaaaCAATACCCAT‑‑‑AA‑AAAT‑‑TAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTGACATAatatata                        <  2:2796647/126‑1 (MQ=255)
                                                                                                  aTAAAAAAAAAACAATCCCC‑‑TTAAA‑AATT‑‑AAAAAAAAAAAAAAAAAAAAA‑‑AAAAACAAACTATATTTATTAAAATTCACTATTAAACAACATTTTATTTTTAAAAAAAGATATTAACATAaattataa                       >  1:972974/1‑127 (MQ=255)
                                                                                                   aaaaaaaaaaaaaATCCCC‑‑TTAAA‑AATT‑‑AAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTGACATAatatata                        <  2:2537304/127‑1 (MQ=255)
                                                                                                     aaaaaaaaaaaaaaTCCATTAAAA‑ATTA‑‑AAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATCTTGACATAatatata                        <  2:2959733/128‑1 (MQ=255)
                                                                                                     aaaaaaaaaCAATACAC‑TTAAAA‑ATTT‑‑AAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTGACATAatatatat                       <  2:2458485/128‑1 (MQ=255)
                                                                                                       aaaaaaaCAATTCCCTT‑‑‑AA‑AAAT‑‑TAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTGACATAATATATATCTaa                   <  2:3056636/128‑1 (MQ=255)
                                                                                                            aaaaaaataacattaaa‑aatt‑‑aaaaaAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTGACATAATATATATCTAata                 <  2:838882/116‑1 (MQ=255)
                                                                                                            aaaaaaaaaccattAAA‑AATA‑‑AAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTGACATAATATATATCTAata                 <  2:1171356/116‑1 (MQ=255)
                                                                                                              aacaatcaccttaaa‑aatt‑‑aaaaaAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTGACATAATATATATCTAatata               <  2:2767451/118‑1 (MQ=255)
                                                                                                                  ataacatttaa‑aatt‑‑aaaaaaAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTGACATAATATATATCTAAtatatata           <  2:1181094/119‑1 (MQ=255)
                                                                                                                   aaaaattaaa‑aaattaaaaaaAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTGACATAATATATATCTAatatatat            <  2:756949/123‑1 (MQ=255)
                                                                                                                       atttaa‑aaat‑‑‑aaaaaaAAAAAAAAAAAAAACTAAAAAAAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTGACATAATATATATCTAATATATATAATACta     <  1:2417128/124‑1 (MQ=255)
                                                                                                                         taaa‑taata‑aaaaaAAAAAAAAAAAAAAAACTAAAAACAAATTATATTTATTATAATTCAATATTATAACACTTTTTATTTTTAATATAAGATATTGACATAATATATATCTAATATATATAATACta     <  2:1905824/128‑1 (MQ=255)
                                                                                                                          taa‑aaat‑‑taaaaaAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTGACATAATATATATCTAATATATATAATACtata   <  2:1833793/127‑1 (MQ=255)
                                                                                                                          taa‑aaat‑‑taaaaaAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTGACATAATATATATCTAATATATATAATACtata   <  2:2045293/127‑1 (MQ=255)
                                                                                                                          aaa‑aaat‑‑aaaaaaAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTGACATAATATATATCTAATATATATAATACtata   <  2:2162959/128‑1 (MQ=255)
                                                                                                                           |                                                                                                                                  
ATAATAGAGTTAAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTA‑TTTTTTTATTTGTTT‑ATCTTCAC‑AAATAAAAAAAAAACAATCCCCTTTTAAA‑AAAT‑‑AAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTGACATAATATATATCTAATATATATAATACTATAT  >  CP016816/202370‑202617

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.