New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP016816 = 311148470 (0.400)273 (0.190)
+TATA
74/192 12.2 30.3% intergenic (‑71/‑243) JCVSYN2_01300/JCVSYN2_01305 hypothetical protein/30S ribosomal protein S21
?CP016816 311149 = 704 (0.480)intergenic (‑72/‑242) JCVSYN2_01300/JCVSYN2_01305 hypothetical protein/30S ribosomal protein S21
Rejected: Coverage evenness skew score above cutoff.

Only 100 of 1005 total aligned reads displayed.

GTACCAGTTGTAATAACTAATCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑TATATATATATATATATATATATAT‑‑A‑ATGCA‑ATAT‑‑GTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTATTTTTATTTAAA  >  CP016816/311022‑311277
                                                                                                                                   |                                                                                                                                      
gTACCAGTTGTAATAACTAATCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACCCACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACAGATATACCATAcattcat‑‑‑‑t                                                                                                                                        >  1:2733471/1‑128 (MQ=255)
gTACCAGTTGTAATAACTAATCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATAAGATTCAAAACATATATAACATAcaatcat‑‑‑‑t                                                                                                                                        >  2:793782/1‑128 (MQ=255)
  aCCAGTTGTAATAACTAATCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAGTACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑tat                                                                                                                                      >  2:2671145/1‑128 (MQ=255)
  aCCAGTTGTAATAACTAATCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑tat                                                                                                                                      >  1:453763/1‑128 (MQ=255)
  aCCAGTTGTAATAACTAATCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑tat                                                                                                                                      >  1:2476960/1‑128 (MQ=255)
        tGTAATAACTAATCCAAATGAACTTAAAATTGTAATTATCTTTTTCATTTTAAACACCCCTTAGTAAAAAATAAAATACTTCTTACATACGATTCAAAACATATATAAAATACATTCAT‑‑‑‑aaaatatat                                                                                                                                >  2:2217274/1‑128 (MQ=255)
            ataaataaTACAAATTAACTTAAAATTGTAATTTAATTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑tatatatatatat                                                                                                                            <  1:2097377/128‑1 (MQ=255)
            ataaCTAATCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑tatatatatatat                                                                                                                            >  1:2262833/1‑128 (MQ=255)
              aaCTAATCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑tatatatatatatat                                                                                                                          >  2:254972/1‑128 (MQ=255)
               aCTAATCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑tatatatatatatata                                                                                                                         >  1:905240/1‑128 (MQ=255)
                cTAATATAAATTAAATTAAAATTTTAATTAACTTTTTCATTTTACACACACCTTATTAAAAAATAAAATACTTTTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑tatatatatatatatat                                                                                                                        <  1:3211817/128‑1 (MQ=255)
                 tAATCTAAATGAAATTAAAATTGTTAAAAACAATATCAATTTAAACACCCCTTATAAAAAAATAAAATACTATTTAAATATTATTCAAAACATATATAACATACAATCAT‑‑‑‑tatatatatatatatata                                                                                                                       <  2:1921316/128‑1 (MQ=255)
                   aTCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACTATTCAAAACATATATAACATACATTCAT‑‑‑‑tatatatatatatatatata                                                                                                                     >  2:1382219/1‑128 (MQ=255)
                    tCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑tatatatatatatatatatat                                                                                                                    >  1:181982/1‑128 (MQ=255)
                     ccAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑tatatatatatatatatatata                                                                                                                   >  1:1006824/1‑128 (MQ=255)
                        aattaaattaAAATTTTAAATAACTTTTTTATTTTAGACACAACTTATTAAAAAATATAATAATTTTTATATACGATTTAAAAAATATATAACATACATTCAT‑‑‑‑tatatatatatatatatatatatat                                                                                                                <  1:1176440/128‑1 (MQ=255)
                         aTGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑tatatatatataaatatatatatat‑‑a                                                                                                             >  2:2841959/1‑128 (MQ=255)
                          tGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑TATATATATATATATATATATATAT‑‑a‑a                                                                                                           >  1:509934/1‑128 (MQ=255)
                                 aaaaTTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑tatatatatatatat                                                                                                                          >  2:2471136/1‑109 (MQ=255)
                                     ttGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑TATATATATATATATATATATATAT‑‑a‑aaaatatattta                                                                                                >  1:1121819/1‑117 (MQ=255)
                                     ttGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑TATATATATATATATATATATATAT‑‑A‑ATTAA‑ATAT‑‑TTa                                                                                             >  1:3010746/1‑128 (MQ=255)
                                        tAATTAAAATTTTCTTTTTAAACACACCTTATAAAAAAATAAAATAATTGTTAAATAGTATTCAAAACATATATAACAAACATACAT‑‑‑‑TATATATATATATATATATATATAT‑‑A‑ATGCA‑ATAT‑‑GTAAAt                                                                                          <  1:1061524/128‑1 (MQ=37)
                                           ttAAATTTTTCATTTTAAAAACAAATTATTAAAAAATAAAATACTTGTTACATACTATTAAAAAAATATATAACATACATTCAT‑‑‑‑TATATATATATATATATATATATAT‑‑A‑ATGCA‑ATAT‑‑GTAAATGaa                                                                                       <  1:1882944/128‑1 (MQ=38)
                                              aCTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑‑‑TATATATATATATATATATATAT‑‑A‑ATGCA‑ATAT‑‑GTAAAt                                                                                          <  2:2951114/120‑1 (MQ=255)
                                              aCTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑‑‑TATATATATATATATATATATAT‑‑A‑ATGCA‑ATAT‑‑GTAAAt                                                                                          >  1:2951114/1‑120 (MQ=255)
                                               atttttatatttATACACACATTATTAAAAAAAAAAATAATTTTTAAATAATATTCAAAAAATATATATCATAAATACATTA‑‑TATATATATATATATATATATATAT‑‑A‑ATGCA‑ATAT‑‑GTAAATGaaaa                                                                                     <  2:3107273/119‑1 (MQ=255)
                                                   ttCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑TATATATATATATATATATATATAT‑‑A‑ATTCA‑ATAT‑‑ATAAATTAATATATTGt                                                                               >  2:3172064/1‑128 (MQ=39)
                                                      aTTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCATTA‑‑TATATATATATATATATATATATAT‑‑A‑ATGCA‑ATAT‑‑GTAAATGAAAATATGGta                                                                              >  1:3072747/1‑128 (MQ=255)
                                                      aTTTTAAACACACCTTATTAAAAAATATAATACTTTTTACATAAGATTAAAAAAATATATAAAATACATTCAT‑‑‑‑‑‑TATATATATATATATATATATAT‑‑A‑ATGCA‑ATAT‑‑GTAAATGAAAATATGGTataat                                                                          <  2:1153210/128‑1 (MQ=255)
                                                       tattATACACCCCTTATTAAAAAATATAATACTTGTTATATAATATTCAAAACATATATAAAATACATTAATTA‑‑TATATATATATATATATATATATAT‑‑A‑ATGCA‑ATAT‑‑GTAAATGAAAATATGGtat                                                                             <  1:1662841/126‑1 (MQ=255)
                                                         ttAAACACACATTATTAAAAAATAAAATACTTGTTATATACTATACAAAACATATATAAAATATATTCAT‑‑‑‑TATATATATATATATATATATATAT‑‑A‑ATGCA‑ATAT‑‑GTAAATGAAAATATGGTataata                                                                         <  2:1595115/128‑1 (MQ=38)
                                                          tatacacacCTAATTAAAAAATAAAATATATTTTTTATATTATTCAAAAAATATATAAAAAAAATATAT‑‑‑‑ATTATATATATATATATATATATAT‑‑A‑ATGCA‑ATAT‑‑GTAAATGAAAATATGGTATAATAg                                                                        <  2:1423746/125‑1 (MQ=255)
                                                          taaacacacCTTATTAAAAAATAAAATATTTGTTAAATACGATTCAAAACATATATAACATAAATTCAT‑‑‑‑TATATATATATATATATATATATAT‑‑A‑ATGCA‑ATAT‑‑GTAAATGAAAATATGGTATAATAg                                                                        <  1:3174568/125‑1 (MQ=39)
                                                           aaacaaaacTTATTAAAAAATAAAATAATTTTTACATACGATTCAAAACATATATAACATACATTTAT‑‑‑‑TATATATATATATATATATATATAT‑‑A‑ATGCA‑ATAT‑‑GTATATGAAAATATGGTATAATAGc                                                                       <  2:3074578/120‑1 (MQ=38)
                                                              cacCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑TATATATATATATATATATATATAT‑‑A‑ATTCA‑ATAT‑‑GTAAATGAAAATATATTATAATACCAAc                                                                    >  1:724076/1‑128 (MQ=255)
                                                               acaacTTATTAAAAAATAAAATACTTGTTACATAATATTTAAAACATATATAAAATACATTC‑T‑‑‑‑T‑TATATATATATATATATATATAT‑‑A‑ATGCA‑ATAT‑‑GTAAATGAAAATATGGTATAATAGCAACCGt                                                                 <  1:1917911/124‑1 (MQ=255)
                                                               acCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCATTA‑‑TATATATATATATATATATATATAT‑‑A‑ATACA‑ATAT‑‑TTAAATGAAAATATGTTATAATATCaa                                                                     >  1:385170/1‑128 (MQ=255)
                                                                ccccTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑TATATATATATATATATATATATAT‑‑A‑ATTAA‑ATAT‑‑GTAAATAAAAATATGTTATAATATAAAcct                                                                  >  1:788914/1‑127 (MQ=39)
                                                                ccccTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑TATATATATATATATATATATATAT‑‑A‑ATGCA‑ATAT‑‑GTAATTGAAAATTTGGTATAAGAGCAACCg                                                                  >  2:1252061/1‑128 (MQ=255)
                                                                ccacTTATTAAAAAATATAATAATTGTTTCATAATATTAAAAAAATATATAAAATAAATTCAT‑‑‑‑TATATATATATATATATATATATAT‑‑A‑ATGCA‑ATAT‑‑GTAAATGAAAATATGGTATAATAGCAACCg                                                                  <  2:1658033/125‑1 (MQ=37)
                                                                actattattaATATATAAAATAATTTTTATATACTTTTAAAAAAATATATATAATAATTTAAT‑‑‑‑TATAAATATATATATATATATATAT‑‑A‑ATGCA‑ATAT‑‑GTAAATGAAAATATGGTATAATAGCAACCg                                                                  <  1:2039269/124‑1 (MQ=255)
                                                                 cccTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑‑‑‑‑TATATATATATATATATATAT‑‑A‑ATGCA‑ATAT‑‑GTAAATGAAAATATGGTATAATAGCAACCGTTtat                                                             <  2:299525/128‑1 (MQ=255)
                                                                    ttattaAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑‑‑TATATATATATATATATATATAT‑‑A‑ATTAA‑ATAT‑‑ATAAATTAAAATATTTTATTATATCaaaaatatata                                                            >  1:2778803/1‑119 (MQ=255)
                                                                    ttattaAAAAATAAAATAATTGTTAAATAATATTCAAAAAATATATAAAATAAATTCAT‑‑‑‑TATATATATATATATATATATATAT‑‑A‑ATGCA‑ATAT‑‑GTAAATGAAAATATGGTATAATAGCAACCGTTta                                                              <  1:252155/128‑1 (MQ=38)
                                                                     tattaAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑TATATATATATATATATATATATAT‑‑A‑ATGCA‑ATAT‑‑GTAAATGAAAATATGGTATAATAGCAACCGTTtat                                                             <  2:2132810/128‑1 (MQ=255)
                                                                     tattaAAAAATAAAATAATTTTTACATACTATTAAAAAAATATATAAAATACATTCAT‑‑‑‑TATATATATATATATATATATATAT‑‑A‑ATGCA‑ATAT‑‑GTAAATGAAAATATGGTATAATAGCAACCGTTtat                                                             <  1:16127/128‑1 (MQ=39)
                                                                        taAAAAATATATTATTTGTTACTTAATATTCAAAAAATATATAACATACATTCTT‑‑‑‑TATATATATATATATATATATATAT‑‑A‑ATGCA‑ATAT‑‑GTAAATGAAAATATGGTATAATAGCAACCGTTTATaaa                                                          <  2:614462/128‑1 (MQ=255)
                                                                         aaaaaaTAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑TATATATATATATATATATATATATAAA‑ATGAA‑ATAT‑‑GTAAATTAAAATATGTTATAATAGCAACCTTTTATaa                                                           >  1:982037/1‑128 (MQ=255)
                                                                         aaaaaaTAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑‑‑TATATATATATATATATATATAT‑‑A‑ATTCA‑ATAT‑‑ATAAAAGAAAATATTGTATAATATAAACCTTTTATAAAGTa                                                       >  2:2049635/1‑128 (MQ=255)
                                                                          aaaaaTAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑‑‑TATATATATATATATATATATAT‑‑A‑ATTAA‑ATAT‑‑TTAAATTAAAATATGTTATAATATAAACCTTTTATAAAATaa                                                      >  1:2125942/1‑128 (MQ=255)
                                                                             aataaaataCTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑TATATATATATATATATATATATAT‑‑A‑ATTCA‑ATAT‑‑TTAAATTAAAATATGTTATAATAGCAACATTTTATAAATTaaa                                                     >  2:1102410/1‑128 (MQ=38)
                                                                               taaaataCTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑TATATATATATATATATATATATA‑‑‑A‑A‑GCA‑ATAT‑‑GTATATGAAAATATGTTATATTAGCAACAGTTTATAAAGTaaaaaaa                                                 >  1:1728579/1‑128 (MQ=255)
                                                                                aaaataCTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑TATATATATATATATATATATATAT‑‑ATATATATATATAAGTAAATGAAAATATTTTATAATAGAAACAGTTTAGaatttat                                                      >  2:718329/1‑123 (MQ=255)
                                                                                  aataCTTGTTACATACGATTCAAAACATATATAACATACATTCATTA‑‑TATATATATATATATATATATATAT‑‑A‑ATAAA‑ATAT‑‑ATAAATGAAAATATGATATAATAGCAACAGTTTATAAATTaaaaaa                                                  >  2:1719947/1‑128 (MQ=255)
                                                                                      cTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑TATATATATATATATATATATATAT‑‑A‑ATTCA‑ATAT‑‑GTAAATTAAAATATATTATAATAGAAACATTTTATAAAATAAAAAAATAGTa                                            >  2:2298769/1‑128 (MQ=38)
                                                                                      cTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑TATATATATATATATATATATATAT‑‑A‑ATTCA‑ATAT‑‑GTAAATGAAAATATGTTATAATAGAAACATTTTATAAAGTAAAAAAATATTa                                            >  2:2430465/1‑128 (MQ=39)
                                                                                        tGTTACATACGATTCAAAACATATATAACATAAATTCAT‑‑‑‑‑‑‑‑TATATATATATATATATATAT‑‑A‑ATGCA‑ATAT‑‑GTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAAtata                                      <  1:2896131/128‑1 (MQ=255)
                                                                                           tACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑TATATATATATATATATATATATAT‑‑A‑ATGCA‑ATAT‑‑GTAAATGAAAATATGTTATAATATCAACCGTTTATAAAGTAAAAAAATAGTAAatat                                       >  1:1507037/1‑128 (MQ=255)
                                                                                             aataataTTAAAAAAATATATAAAATAAATTTAT‑‑‑‑TATATATATATATATATATATATAT‑‑A‑ATGCA‑ATAT‑‑GTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATAtac                                     <  1:1297738/122‑1 (MQ=38)
                                                                                              aTAAGATTCAAAACATATATAACATATATTCTTTA‑‑TATATATATATATATATATATATAT‑‑A‑ATGCA‑ATAT‑‑GTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAAtata                                      <  1:2812341/128‑1 (MQ=255)
                                                                                                aCGATTCAAAACATATATAACATACATTCATTATATATATATATATATATATATATATAT‑‑A‑ATTAA‑ATAT‑‑GTAAATGAAAATATGATATAATAACAACCGTATATAAAAAAAAAAAAAAAAAAAtata                                      >  1:2626757/1‑128 (MQ=25)
                                                                                                aCGATTCAAAACATATATAACATACATTCAT‑‑‑‑TATATATATATATATATATATATAT‑‑A‑ATTCA‑ATAT‑‑GTAAATGAAAATATGTTATAATAGCAACAGTTTATAAAGTAAAAAAATAGTAAATAtactac                                  >  2:532265/1‑128 (MQ=255)
                                                                                                  gATTCAAAACATATATAACATACATTCAT‑‑‑‑TATATATATATATATATATATA‑AA‑‑A‑AT‑AT‑ATAT‑‑AAAAATAAATATATTATATAATATAAAAAGTATAAAAAATAAAAAAATAAAAAATAAAATAATTAt                              >  2:1743483/1‑128 (MQ=255)
                                                                                                   aTTCAAAACATATATAACATACATTCATTA‑‑TATATATATATATATATATATATAT‑‑A‑ATGCA‑ATAT‑‑GTAAATGAAAATATGGTATAATAGCAACAGTTTATAAAATAAAAAAATAGAAAATAAacaact                                 >  1:2856394/1‑128 (MQ=255)
                                                                                                      cAAAACATATATAACATACATTCAT‑‑‑‑TATATATATATATATATATATATAT‑‑A‑ATGCA‑ATAT‑‑TTAAATGAAAATATTGTATAATATAAACCGTTTATAAAGTAAAAAAATATTAAATATACTACTTAttt                            >  2:1528040/1‑128 (MQ=39)
                                                                                                      ataaaaATATTTATAATATATTTAT‑‑‑‑TTTATATATATATATATATATATAT‑‑A‑ATGCA‑ATAT‑‑GTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTAttt                            <  1:1404775/126‑1 (MQ=255)
                                                                                                       aaaaCATATATAACATACATTCAT‑‑‑‑TATATATATATATATATATATATAT‑‑A‑ATGCA‑ATAT‑‑GTAATTGAAAATATGGTATAATATCAACCGTTTATAAAGTAAAAAAATATTAAATATACTAATTATTTa                           >  2:2884458/1‑128 (MQ=255)
                                                                                                        aaaCATATATAACATACATTCATTA‑‑TATATATATATATATATATATATAT‑‑A‑ATGCA‑ATAT‑‑GTAAATTAAAATATGTTATAATAGAAACAGTTTATAAAATAAAAAAATATTAAATATTCTACTAAttt                            >  2:667940/1‑128 (MQ=255)
                                                                                                          aCATATATAACATACATTCATTA‑‑TATATATATATATATATATATATAT‑‑A‑ATGCA‑ATAT‑‑GTAAATTAAAATATTTTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTtatataa                          >  2:2770137/1‑127 (MQ=255)
                                                                                                           cATATATTACATAAATTCAT‑‑‑‑TATATATATATATATATATATATAT‑‑A‑ATGCA‑ATAT‑‑GTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACtaa                       <  2:3207316/128‑1 (MQ=255)
                                                                                                           cATATATAACATACATTCAT‑‑‑‑TATATATATATATATATATATATAT‑‑A‑ATGAA‑ATAT‑‑GTAAATGAAAATATGTTATAATATCAACAGTTTATAAAGTAAAAAAATAGTAAATATAATACTTATTtaataa                       >  2:3035483/1‑128 (MQ=38)
                                                                                                           cATATATAAAATATAATAAT‑‑‑‑TATATATATATATATATATATATAT‑‑A‑ATGCA‑ATAT‑‑GTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACtaa                       <  1:2197630/128‑1 (MQ=255)
                                                                                                               tataACATACATTCAT‑‑‑‑TATATATATATATATATATATATAT‑‑A‑TATAA‑ATAT‑‑ATAAAAAAAAATATATTATAATATAACCCGATTATAAATAATAAAAATATAAAATATAAAAATTATATAATAATaaa                   >  1:1569306/1‑128 (MQ=255)
                                                                                                               tataACATACATTCAT‑‑‑‑TATATATATATATATATATATATAT‑‑A‑ATGCA‑ATAT‑‑GTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATaaa                   >  1:2663070/1‑128 (MQ=255)
                                                                                                               tataACATACATTCAT‑‑‑‑TATATATATATATATATATATATAT‑‑A‑AAGCA‑ATAT‑‑GTAAATGAAAATATTTTATAATAGCAACAGTTTATAAAGTAAAAAAATATAATATATACTAATTATTAAAtaataat                   >  2:2618119/1‑127 (MQ=255)
                                                                                                                ataACATACATTCAT‑‑‑‑TGTATATATATATATATATATATAT‑‑A‑ATAAA‑ATAT‑‑GTAAATCAAAATATTCTATAATAGCAACAGTTTATAAAGTAAAAAAATATTAAATAAACTAATAATTTACTAATaaaa                  >  1:2328651/1‑128 (MQ=255)
                                                                                                                ataACATACATTCAT‑‑‑‑TATATATATATATATATATATATAT‑‑A‑ATGCA‑ATAT‑‑ATAAATGAAAATATGGTATAATAGCAACATTTTATAAATTAAAAAAATAGTAAATATAATAATTATATACTAATaaaa                  >  2:1804739/1‑128 (MQ=38)
                                                                                                                  aaCATACATTCAT‑‑‑‑‑‑TATATATATATATATATATATAT‑‑A‑ATGCA‑ATAT‑‑GTAAATTAAAATATGTTATAATAGCAACATTTTATAAAGTAAAAAAATAGTAAATATAATACTTATTTACTAATAAAAtata              >  2:234853/1‑128 (MQ=255)
                                                                                                                   acatacatTCAT‑‑‑‑TATATATATATATATATATATATAT‑‑A‑ATTCA‑ATAT‑‑GTAAATGAAAATACTGTATAATAGCAACCTTTTATAAAGTAAAAAAATAGAAAATATAATACTTATTAACTAATAAAATCt               >  2:2085370/1‑128 (MQ=38)
                                                                                                                   acatacatTCAT‑‑‑‑TATATATATATATATATATATATAT‑‑A‑ATGCA‑ATAT‑‑GTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTaaaaa                                                   >  1:1350461/1‑92 (MQ=255)
                                                                                                                   aaataaatTAAT‑‑‑‑TATATATATATATATATATATATAT‑‑A‑ATGCA‑ATAT‑‑GTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCt               <  1:3119887/126‑1 (MQ=255)
                                                                                                                    catacatTCAT‑‑‑‑TATATATATATATATATATATATAT‑‑A‑ATGCA‑ATAT‑‑GTAAATGAAAATATTGTATAATATCAACAGTTTATAAAGTAAAAAAATATTAAATATACTACTTATTTACTAATAAAATCTa              >  2:1050255/1‑128 (MQ=255)
                                                                                                                     atatatTAAT‑‑‑‑TATATATATATATATATATATATAT‑‑A‑ATGCA‑ATAT‑‑GTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTAt             <  2:1873950/128‑1 (MQ=255)
                                                                                                                     atacatTCAT‑‑‑‑TATATATATATATATATATATATAT‑‑A‑ATGCT‑ATAT‑‑GTAAATCAAAATATGGTATATTAGCAAACGTTTATAAAGTAAAAAAATATTAAATATAGTACTTATTTACTATAAAAatatat             >  1:2406532/1‑128 (MQ=38)
                                                                                                                     atacatTCAT‑‑‑‑TATATATATATATATATATATATAT‑‑A‑ATGCA‑ATAT‑‑GTAAATGAAAATATGGTATAATATCAACCGTTTATAAATTAAAAAAATAGTATATATACTACTTATTTACTAATAAAATCTAt             >  2:1327886/1‑128 (MQ=255)
                                                                                                                     atacatTCAT‑‑‑‑TATATATATATATATATATATATAT‑‑A‑ATGCA‑ATAT‑‑GTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTAt             <  1:68650/128‑1 (MQ=255)
                                                                                                                     atacatTCAT‑‑‑‑TATATATATATATATATATATATAT‑‑A‑ATGCA‑ATAT‑‑GTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTAAATATTTAATAATAAAATCTAt             >  1:1234197/1‑128 (MQ=255)
                                                                                                                     atacatTCAT‑‑‑‑TATATATATATATATATATATA‑A‑‑‑A‑AAGAA‑ATAT‑‑ATAAATTAAAATATGTTATAATATCAAACGTTTATAAAGTAAAAAAATATTAAATATAATACTTATTTAAAAATAAAATCTAttt           >  1:837668/1‑128 (MQ=255)
                                                                                                                      tacatTCAT‑‑‑‑TATATATATATATATATATATATA‑‑‑A‑A‑GCA‑ATAT‑‑GAAAATCAAAATATGGTATTAAAGCAACAGATTATAAAGTAAAAATATATTATATATAATACTTATTTACTAATAAAAtagagtta          >  1:559251/1‑121 (MQ=255)
                                                                                                                      tacatTCAT‑‑‑‑‑‑TATATATATATATATATATATAT‑‑A‑ATGCA‑ATAT‑‑GTAAATGAAAATATTGTATAATATCAACATTTTATAAAGTAAAAAAATATTAAATATAATAATTATTTAATAAAAAAATATAtttt          >  2:858570/1‑128 (MQ=255)
                                                                                                                       acatTCAT‑‑‑‑TATATATATATATATATATATATAT‑‑A‑ATGCA‑ATAT‑‑GTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGAAAATAAACTACTTATTAAATAAAAAAATCTAttt           >  1:2575196/1‑128 (MQ=39)
                                                                                                                        cattcattatatatatatatatatatatatatatat‑‑a‑ATGCA‑ATAT‑‑GTAAAAGAAAATATGTTATAATATCAAAAGTTTATAAATTAAAAAAATAGTAAATATACTAATTATTTACTAAAAAAATCTa              >  2:403113/12‑128 (MQ=37)
                                                                                                                        cattcat‑‑‑‑tATATATATATATATATATATATAT‑‑A‑ATGCA‑ATAT‑‑GTAAATTAAAATATTGTATAATAGCAACATTTTATAAAATAAAAAAATATTAAATATAATAATTATTTACTAAAAAAATATAtttt          >  2:1985882/1‑128 (MQ=37)
                                                                                                                            cat‑‑‑‑tATATATATATATATATATATATAT‑‑A‑AAGAA‑AAAT‑‑TTAAATTAAAATATGGTATAATAGCAACAGTTTATAAAGTAAAAAAATAGAAAATATAATAATTATTAAATAATAAAATATAtttaaaat      >  1:1933666/1‑123 (MQ=25)
                                                                                                                               attatatatatatatatatatatatatat‑‑a‑ATGCA‑ATAT‑‑TTAAATGAAAATATTTTTTAATAGCAACCGTTTATAAATTAAAAAAATAGTAAATATACTAATTATTTACTAATAAAAAATATTtttag       >  1:1990398/5‑127 (MQ=255)
                                                                                                                                ttatatatatatatatatatatatatat‑‑a‑ATTCA‑ATAT‑‑GTAAATGAAAATATGGTATAATATAAACAGTTTATAAAGTAAAAAAATATTAAATATAATACTTATTTAATAATAAAATATATTtttata      >  1:589982/4‑127 (MQ=255)
                                                                                                                                 tatatatatatatatatatatatatat‑‑a‑TTTAA‑ATAT‑‑GTAAATTAAAATATTTTATAATATAAACATTATATAAATTAAAAAAATAATAAATAAACTAATTATTTACAAATAAAATATATTtttattt     >  1:1772492/3‑128 (MQ=255)
                                                                                                                                  atatatatatatatatatatatatat‑‑a‑ATGCA‑ATAT‑‑GTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTATTtttattta    <  2:453763/127‑1 (MQ=255)
                                                                                                                                   tatatatatatatatatatatatat‑‑a‑ATGCA‑ATAT‑‑GTAAATGAAAATATGGTATAATTGCAACGCTTTAAAAAGTATAAAAATATTAAATTTACTATTTATTAAATATTAAAAACTATTTTT‑TTTaaa  >  1:638071/1‑128 (MQ=255)
                                                                                                                                   tatatatatatatatatatatatat‑‑a‑ATGAA‑ATAT‑‑GTAAATGAAAATATTTTATAATAGAAACATTTTATAAATTAAAAAAATAGTATATATAATACTTATTTAATAATAAAATATATTTTTATTTaa   >  1:1469601/1‑128 (MQ=37)
                                                                                                                                   |                                                                                                                                      
GTACCAGTTGTAATAACTAATCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑TATATATATATATATATATATATAT‑‑A‑ATGCA‑ATAT‑‑GTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTATTTTTATTTAAA  >  CP016816/311022‑311277

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.