New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP016816 = 311148137 (0.080)551 (0.270)
+TATA
111/192 17.8 75.2% intergenic (‑71/‑243) JCVSYN2_01300/JCVSYN2_01305 hypothetical protein/30S ribosomal protein S21
?CP016816 311149 = 203 (0.100)intergenic (‑72/‑242) JCVSYN2_01300/JCVSYN2_01305 hypothetical protein/30S ribosomal protein S21
Rejected: Coverage evenness skew score above cutoff.

Only 100 of 709 total aligned reads displayed.

GTACCAGTTGTAATAACTAATCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTC‑AT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  CP016816/311022‑311148
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TATATATATATATATATATATATA‑‑TA‑AT‑‑‑GCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTATTTTTATTTA  >  CP016816/311149‑311275
                                                                                                                                ||||||                                                                                                                                     
GTACCAGTTGTAATAACTAATCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTC‑AT‑‑T                                                                                                                                          >  1:1115284/1‑128
GTACCAGTTGTAATAACTAATCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTC‑AT‑‑T                                                                                                                                          >  2:253708/1‑128
GTACCAGTTGTAATAACTAATCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTC‑AT‑‑T                                                                                                                                          >  1:559439/1‑128
 TACCAGTTGTAATAACTAATCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTCTTACATACGATTCAAAACATATATAACATACATAC‑AA‑‑TA                                                                                                                                         >  2:1203379/1‑128
  ACCAGTTGTAATAACTAATACAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTAATAAAAAATAAAATACTATTTACATACGATTCAAAACATATATAACATACATTC‑AT‑‑TAT                                                                                                                                        >  2:828299/1‑128
    CAGTTGTAATAACTAATCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTC‑AT‑‑TATAT                                                                                                                                      >  2:756046/1‑128
    CAGTTGTAATAACTAATCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTC‑AT‑‑TATAT                                                                                                                                      >  1:122213/1‑128
      GTTGAAATAACTAATCCAAATGAACTTAAAAATGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTC‑AT‑‑TATATAT                                                                                                                                    <  1:692238/128‑1
         GTAATAACTAATCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTC‑AT‑‑TATATATATA                                                                                                                                 >  2:2434077/1‑128
         GTAATAACTAATCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTC‑AT‑‑TATATATATA                                                                                                                                 >  2:147218/1‑128
         GTAATAACTAATCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTC‑AT‑‑TATATATATA                                                                                                                                 >  1:1665147/1‑128
          TAATAACTAATCCAAATGAACTTAAAATTCAAATTAACTTTTTCATTTTACACACCCCTTATTAAAATATAAAATACTTGTTACATACGATTCAAAACATATATAACAAACAATC‑AT‑‑TATATATAGAT                                                                                                                                >  2:4015427/1‑128
           AATAACTAATCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTC‑AT‑‑TATATATATATA                                                                                                                               >  1:3490020/1‑128
            ATAACTAATCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACTATTCAAAAAATATATAACATACATTC‑AT‑‑TATATAAATATAT                                                                                                                              >  2:1702439/1‑128
             TAACTAATCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTC‑AT‑‑TATATATATATATA                                                                                                                             >  2:1298294/1‑128
                CTAATCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTC‑AT‑‑TATATATATATATATAT                                                                                                                          >  2:2645433/1‑128
                CTAATCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTC‑AT‑‑TATATATATATATATAT                                                                                                                          >  1:4416157/1‑128
                 TAATCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTC‑AT‑‑TATATATATATATATATA                                                                                                                         >  2:3823899/1‑128
                 TAATACAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTC‑AT‑‑TATATATATATATATATA                                                                                                                         >  1:4059385/1‑128
                   ATCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTC‑AT‑‑TATATATATATATATATATA                                                                                                                       >  2:3478114/1‑128
                    TCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTC‑AT‑‑TATATATATATATATATATAT                                                                                                                      >  2:1119624/1‑128
                    TCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTC‑AT‑‑TATATATATATATATATATAT                                                                                                                      >  2:3181051/1‑128
                     CCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTC‑AT‑‑TATATATATATATATATATATA                                                                                                                     >  1:2197940/1‑128
                      tAAATTAACTTAAAATTGTAATTAAATTTTTAATTTTACACACACCTTATTAAAAAATAAAATACTTGTTACATAATATTAAAAAAATATATAAAATACATTC‑AT‑‑TATATATATATATATATATATAT                                                                                                                    <  1:2237289/127‑1
                      CAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACTATTCAAAACATATATAACATACATTC‑AT‑‑TATATATATATATATATATATAT                                                                                                                    <  2:2241534/128‑1
                       AAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTC‑AT‑‑TATATATATATATATATATATATA                                                                                                                   >  1:1410750/1‑128
                        AATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTC‑AT‑‑TATATATATATATATATATATATAT                                                                                                                  >  1:104158/1‑128
                         ATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTC‑AT‑‑TATATATATATATATATATATATATA                                                                                                                 >  2:2077452/1‑128
                          TGAACTTAAAATTGTAATTAACTTTTTCATTTTACACCCCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTC‑AT‑‑TATATATATATATATTTATATATATAT                                                                                                                >  1:2578791/1‑128
                          TGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAAAATATATAACATACATTC‑AT‑‑TATATATATATATATATATATATATAT                                                                                                                >  1:3416182/1‑128
                             aataAAAATTTTAATTAACTTTTTCATTTTAAACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTC‑AT‑‑TATATATATATATATATATATATATATA‑‑TA                                                                                                           <  2:4345073/124‑1
                             ACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTC‑AT‑‑TATATATATATATATATATATATATATAaa                                                                                                             >  2:1043341/1‑126
                             ACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTC‑AT‑‑TATATATATATATATATATATATATATA‑‑TA                                                                                                           >  2:2756524/1‑128
                              CTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTC‑AT‑‑TATATATATATATATATATATATATATA‑‑TAt                                                                                                          >  1:3351322/1‑127
                               TTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTC‑AT‑‑TATATATATATATATATATATATATATAattc                                                                                                           >  2:675285/1‑124
                               TTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTC‑AT‑‑TATATATATATATATATATATATATATA‑‑TAta                                                                                                         >  1:1868508/1‑126
                               TTAAAATTGTAATTAAATTTTTCATTTTACAAACACCTTATTAAAAAATAAAATACTTGTTACATAAGATTCAAAACATATATAACATACATTC‑AT‑‑TATATATATATATATATATATATAatgaatgt                                                                                                           <  1:4273073/128‑9
                               TTAAAATTGTAATAAACTTTTTCATTTTACACACACCTTATTAAAAAATAAAATAATTGTTACATACGATTCAAAACATATATAACATACATTC‑AT‑‑TATATATATATATATATATATATATATA‑‑TAta                                                                                                         <  2:1638017/128‑3
                                  AAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTC‑AT‑‑TATATATATATATATATATATATATATA‑‑TAtaatg                                                                                                      >  2:3268543/1‑123
                                  AAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTC‑AT‑‑TATATATATATATATATATATATATATA‑‑TA‑Aaaaa                                                                                                     >  2:1743156/1‑124
                                  AAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTC‑AA‑‑TATATATATATATATATATATATATATA‑‑TAtaatt                                                                                                      >  2:3938196/1‑123
                                     tttTAATTAAATTTTTAATTTTACACACACCTTATTAAAAAATAAAAATCTTGTTACATACGATTAAAAACATATATAACATAAATTC‑AT‑‑TATATATATATATATATATATATATATA‑‑TAtaatgcaa                                                                                                   <  1:3179271/125‑9
                                            TAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTC‑AT‑‑TATATATATATATATATATATATATATA‑‑TA‑AA‑‑‑TCTATATGTAAAa                                                                                        >  1:3544365/1‑127
                                             aaaTTTTTCATTTTAGACACACCTTATTAAAAAATATAATACTTGTTACATAATATTCAAAAAATATATAAAATACATTC‑AT‑‑TATATATATATATATATATATATATATA‑‑TA‑AT‑‑‑GCAATATGTAAATG                                                                                       <  1:4519395/125‑1
                                                   TTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTC‑AT‑‑TATATATATATATATATATATATATATAATTA‑AA‑‑‑GCAATATTTAAATTAAAA                                                                                   >  2:2848031/1‑128
                                                     CATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTC‑AT‑‑TATATATATATATATATATATATATATA‑‑TA‑AT‑‑‑GAAATATCTAAATTAAAAAATG                                                                               >  1:2430002/1‑128
                                                       taTTACACACACATTATTAAAAAATAAAATAATTTTTATATACTATTCAAAAAATATATAACATACATTC‑AT‑‑TATATATATATATATATATATATATATA‑‑TA‑AT‑‑‑GCAATATGTAAATGAAAATATGGT                                                                             <  2:3755200/126‑1
                                                        TTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTC‑ATTATATATATATATATATATATATATATATA‑‑TA‑AT‑‑‑TAAATATATAAATCAATATATta                                                                              >  2:3516747/1‑126
                                                        TTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTC‑AT‑‑TATATATATATATATATATATATATATA‑‑TA‑AA‑‑‑TCAATATTTAAATTAAAATATttta                                                                            >  2:1787844/1‑124
                                                         TTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTC‑ATTATATATATATATATATATATATATATATA‑‑TA‑AT‑‑‑GCAATATTAAAATGAAAATATttt                                                                             >  2:187525/1‑125
                                                          taaacaaaaCTTATTAAAAAATTATATATTTGTTACATAAGATTCAAAAAATATATAACATACATTC‑ATTATATATATATATATATATATATATATATA‑‑TA‑AT‑‑‑GCAATATGTAAATGAAAATATGGTA                                                                            <  2:4293855/119‑1
                                                           ACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTC‑AT‑‑TATATATATATATATATATATATATATA‑‑AA‑A‑‑‑‑‑AAATATAAAAAAAAAAATATTATATAATA                                                                       >  2:2190839/1‑128
                                                            CACACAACTTATTAAAAAATATAATAATTTTTACATACTATTCAAAAAATATATAACATACATTC‑AT‑‑TATATATATATATATATATATATATATA‑‑TA‑AT‑‑‑GCAATATGTAAATGAAAATATGGTATAAT                                                                        <  2:2795934/128‑1
                                                             ACACCCCTAATTTAAAAATATAATACTTATTACATACGATTCAAAACATATATAACATAAATTC‑AT‑‑TATATATATATATATATATATATATATA‑‑TA‑AT‑‑‑GCAATATGTAAATGAAAATATGGTATAATA                                                                       <  2:1444012/128‑1
                                                                CCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTC‑ATTATATATATATATATATATATATATATATA‑‑TA‑AA‑‑‑TCAATATGTAAATCAAAATATGATATAATAt                                                                      >  1:2826774/1‑127
                                                                CCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTC‑AT‑‑TATATATATATATATATATATATATATA‑‑TA‑AT‑‑‑GCAATATGTAAATGAAAATATGGTATAATAGCA                                                                    >  2:1387493/1‑128
                                                                  aCTTATTAAAAAATAAAATAATTGTTACATAATATTAAAAAAATATATAAAATACATTA‑AT‑‑TATATATATATATATATATATATATATA‑‑TA‑AT‑‑‑GCAATATGTAAATGAAAATATGGTATAATAGCAAC                                                                  <  2:3971609/127‑1
                                                                    TTATTAAAAAATAAAATACTTTTTTAATTCTATTCTAAAAATATATAAAATTCAATC‑AT‑‑TATATATATATAAATATATATATATATA‑‑TA‑AT‑‑‑GCAATATGTAAATGAAAATATGGTATAATAGCAACCG                                                                <  2:2306156/128‑1
                                                                     TATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTC‑AT‑‑TATATATATATATATATATATATATATA‑‑TA‑AA‑‑‑TAAATATATAAAAAAATATATTTTATAATAtaaaaagt                                                               >  1:2536630/1‑120
                                                                         AAAAAATAATATACTTTTTATATAATATTCAAAAAATATATAAAATATATTC‑ATTATATATATATATATATATATATATATATA‑‑TA‑AT‑‑‑GCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTT                                                             <  1:2735172/128‑1
                                                                         AAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTC‑AT‑‑TATATATATATATATATATATATATATA‑‑TATATAAATCAATATGTAAATGAAAATATGTTATAATATCAACCGT                                                               >  2:516982/1‑128
                                                                         AAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTC‑AT‑‑TATATATATATATATATATATATATATA‑‑TA‑AT‑‑‑GAAATATGTAAATGAAAATATGGTATAATAGAAACAGTATAT                                                           >  1:1313070/1‑128
                                                                           AAAATAAAATATTTTTTAAATAATATTTAAAAAATATATAAAATATATTC‑ATTATATATATATATATATATATATATATATA‑‑TA‑AT‑‑‑GCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTAT                                                           <  1:756046/128‑1
                                                                           AAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTC‑ATTATATATATATATATATATATATATATATA‑‑TA‑AT‑‑‑AAAATATGTATATTAAAATATGGTAAAATAtaaaagatttat                                                           >  2:294966/1‑116
                                                                             AATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTC‑AT‑‑TATATATATATATATATATATATATATA‑‑TA‑AT‑‑‑TCAATATTTAAATTAAAATATGATATAATATAAACAATTTATAAAt                                                       >  1:4323017/1‑127
                                                                              ATAAAATAATTTTTAAATAATATTATAAAAATATATAACATACATTC‑AT‑‑TATATATATATATATATATATATATATA‑‑TA‑AT‑‑‑GCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGT                                                      <  2:3071203/128‑1
                                                                                 AAATACTTGTTACATACGATTCAAAACATATATAACATACATTC‑ATTATATATATATATATATATATATATATATA‑‑TA‑AT‑‑‑GAAATATGTAAATGAAAATATGATATAATATCAACCGTTTATAAAGTA                                                     >  2:3421599/1‑128
                                                                                       TTGTTACATACGATTCAAAACATATATAACATACATTC‑AT‑‑TATATATATATATATATATATATATATA‑‑TA‑AA‑‑‑TAAATATATAAATAAAAATATGTTATAATATAAACATTTTATAATGTAAAAAAATA                                             >  2:626539/1‑128
                                                                                          TTACATACGATTCAAAACATATATAACATACATTC‑AT‑‑TATATATATATATATATATATATATATA‑‑TA‑AT‑‑‑GCAATATTTAAAAGAAAATATGGTATAATATCCACCGGTTATAAAGTAAAAAAATACTA                                          >  1:4119721/1‑128
                                                                                           taaattatATTAAAAAAATATATAATATAAATTA‑AT‑‑TATATATATATATATATATATATATATA‑‑TA‑AT‑‑‑GCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAA                                         <  1:814281/120‑1
                                                                                           TACATACGATTCAAAACATATATAACATACATTC‑ATTATATATATATATATATATATATATATATA‑‑TA‑AT‑‑‑GCTATATGTAAAATAAAATATGTTATAATAGCAACATTTTATAAAGTAAAAATATAat                                           >  1:3720346/1‑126
                                                                                            atataatATTAAAAAAATATATAAAAAACATTCTATA‑TATATATATATATATATATATATATATA‑‑TA‑AT‑‑‑GCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTA                                          <  2:3351322/121‑1
                                                                                            agATACTATTAAAAAAATATATAACATACATTA‑ATTATATATATATATATATATATATATATATA‑‑TA‑AT‑‑‑GCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTA                                          <  1:3629639/126‑1
                                                                                             catattATTAAAAAAATATATATCATACATTC‑ATTATATATATATATATATATATATATATATA‑‑TA‑AT‑‑‑GCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAA                                         <  1:3019417/122‑1
                                                                                               taatATTCTAAAAATATATAAAATATATTT‑TTTATATATATATATATATATATATATATATA‑‑TA‑AT‑‑‑GCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAAT                                       <  1:1978267/124‑1
                                                                                               TACTATTCAAAATATATATAAAATAAATTA‑ATTATATATATATATATATATATATATATATA‑‑TA‑AT‑‑‑GCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAAT                                       <  1:3855133/128‑1
                                                                                                aatATTAAAAACATATATAACATAGATTC‑ATTATATATATATATATATATATATATATATA‑‑TA‑AT‑‑‑GCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATA                                      <  2:3646802/125‑1
                                                                                                  tATTCTAAACATATATAATATAGATTC‑ATTATATATATATATATATATATATATATATA‑‑TA‑AT‑‑‑GCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATA                                    <  2:479963/127‑1
                                                                                                    tttAAAAAATATATAAAATAAATTT‑ATTATATATATATATATATATATATATATATA‑‑TA‑AT‑‑‑GCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACT                                  <  1:4180671/125‑1
                                                                                                      CAAAACATATATAACATACATTC‑AT‑‑TATATATATATATATATATATATATATA‑‑TA‑AT‑‑‑GAAATATTTAAATGAAAATATGGTATAATACAAAAAGTTTATAAAGTAAAAAAATATTAAATAaaataatt                              >  1:159632/1‑120
                                                                                                      CAAAAAATATATAACATAAATTT‑AT‑‑TATATATATATATATATATATATATATA‑‑TA‑AT‑‑‑GCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTT                              <  1:2967543/128‑1
                                                                                                       AAAACATATATAACATACATTC‑ATTATATATATATATATATATATATATATATA‑‑TA‑AT‑‑‑GCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACT                               <  2:3712577/128‑1
                                                                                                         aaaATATATAAAATACATTC‑ATTATATATATATATATATATATATATATATA‑‑TA‑AT‑‑‑GCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTA                             <  2:1939567/125‑1
                                                                                                          ACATATATAACATACATTC‑AT‑‑TATATATATATATATATATATATATATA‑‑TA‑AT‑‑‑TCAATATGTAAATAAAAATATGGTATAATATAAAACGTTTATTAATTAAAAAAATATTAAATATAATACTTATat                          >  1:399419/1‑126
                                                                                                               TATAACATACATTC‑AT‑‑‑‑TATATATATATATATATATATATATA‑‑TA‑AT‑‑‑GCAATATGAAAATGAAAATATTTTATAATAGAAACATTTTATAAAATAAAAAAATAGTAAATAAACTACTTATTTAATAAaa                   >  1:2672144/1‑126
                                                                                                                atataATAAATTT‑AT‑‑TATATATATATATATATATATATATATA‑‑TA‑AT‑‑‑GCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAAT                    <  1:1746000/123‑1
                                                                                                                  AACATACATTC‑AT‑‑‑‑TATATATATATATATATATATATATA‑‑TA‑AT‑‑‑GCAATATGTAAATGAAAATATGTTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTAATAATAAAA                >  2:3909465/1‑128
                                                                                                                       ACATTC‑ATTATATATATATATATATATATATATATATA‑‑TA‑AT‑‑‑TAAATATGTAAATGAAAATATGTTATAATATCAACATTTTATAAATTAAAAAAATAGTAAATATAATACTTATTTACTAATAAAAT               >  1:3916671/1‑128
                                                                                                                            C‑AT‑‑TATATATATATATGTATATATATATATA‑‑TA‑AT‑‑‑GCAATATGTAAATGAAAATATGGTATAATATCAACCTTTTATAAAGTAAAAAAATAGTAAATATAATAATTATTTACTAATAAAATCTATTTT        >  1:937377/1‑128
                                                                                                                               ttaTATATATATATATATATATATATATATA‑‑TA‑AT‑‑‑GCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTATTTT        <  1:1502910/125‑1
                                                                                                                               ttaTATATATATATATATATATATATATATA‑‑TA‑AT‑‑‑GCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTATTTT        <  1:3268543/125‑1
                                                                                                                               T‑‑TATATATATATATATATATATATATATA‑‑TA‑AT‑‑‑GCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTATTTTTA      <  1:633848/128‑1
                                                                                                                               T‑‑TATATATATATATATATATATATATATA‑‑TA‑AT‑‑‑GCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTATTTTTA      <  1:48793/128‑1
                                                                                                                                tataaATATATATATATATATATATATATA‑‑TA‑AT‑‑‑GCAATATGTAAATGAATATATTTTATAATAGCAACCTTTTATAAAGTTAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTATTTTT       <  2:4456261/123‑1
                                                                                                                                 aTATATATATATATATATATATATATATA‑‑TA‑AT‑‑‑GAAATATGTAAATTAAAATATGTTATAATAGCAACCTTATATAAAATAAAAAAATAATAAATAAACTACATATTAACTAATAAAATCTAATTTTA      >  1:2111706/2‑128
                                                                                                                                  TATATATATATATATATATATATATATA‑‑TA‑AT‑‑‑GCAATATGTAAATGAAAATATGTTATAATAGAAACATTTTATAAAGTAAAAAAATATAATATATACTACTTATTTAATAATAAAATATATTTTTAT     >  2:1581914/1‑128
                                                                                                                                  TATATATATATATATATATATATATATA‑‑TA‑AT‑‑‑GCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTATTTTTAT     <  2:4087976/128‑1
                                                                                                                                   tTATATATATATATATATATATATATA‑‑TA‑AT‑‑‑GCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAGAATCTATTTTTATT    <  1:3080355/127‑1
                                                                                                                                    TATATATATATATATATATATATATA‑‑TA‑AT‑‑‑TCAATATTTAAATGAAAATATGGTATAATAGCAACCTTATATAAATTAAAAAAATAGTAAATATACTACTTATTTACTAAAAAAATCTATTTTTATTT   >  1:3780898/1‑128
                                                                                                                                    TATATATATATATATATATATATATA‑‑TA‑AT‑‑‑GCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAATATCTATTTATATTT   >  2:359112/1‑128
                                                                                                                                ||||||                                                                                                                                     
GTACCAGTTGTAATAACTAATCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTC‑AT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  CP016816/311022‑311148
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TATATATATATATATATATATATA‑‑TA‑AT‑‑‑GCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTATTTTTATTTA  >  CP016816/311149‑311275

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.