BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP016816	165253 =	1435 (0.680)	203 (0.110)	93/220	27.6	14.3%	intergenic (+217/‑325)	JCVSYN2_00665/JCVSYN2_00670	tRNA N6‑adenosine(37)‑N6‑threonylcarbamoyltransferase complex dimerization subunit TsaB/tRNA‑Ser
*	?	CP016816	= 165249	1171 (0.640)	203 (0.110)	93/220	27.6	14.3%	intergenic (+213/‑329)	JCVSYN2_00665/JCVSYN2_00670	tRNA N6‑adenosine(37)‑N6‑threonylcarbamoyltransferase complex dimerization subunit TsaB/tRNA‑Ser
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 1520 total aligned reads displayed.

GATAATATTTAGTTTCATTAATTTATCGCACTTGTATGAATTAGTAA‑GAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTAAAAGAATTAATTTGAA‑CTTGTAAAAAATAGC‑TTTTTTTT‑TTTTTTTTTTTAT‑AATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCT‑AAAAAA‑ATAGAAAGGAAAAAA‑TATTGTTAAAAGTAATACTAAAATTATTTAATGTTAATTAAAA  >  CP016816/165122‑165376

  taataTTTAGTTTCATTAATTTATCGCACTTGTATGAATTAGTAA‑GAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAA‑CTTGTAAAAAATAGC‑tt                                                                                                                                    >  1:2070285/1‑128 (MQ=255)

   aataTTTAGTTTCATTAATTTATCGCACTTGTATGAATTAGTAA‑GAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAA‑CTTGTAAAAAATAGC‑ttt                                                                                                                                   >  2:4431142/1‑128 (MQ=255)

   aataTTTAGTTTCATTAATTTATCGCACTTGTATGAATTAGTAA‑GAAACTAAAACTATTATCTTTTTAGATATTTTTAGTATATTCAAATTTTTAAAAAATTAATTTGAA‑CTTGTAAAAAATAGC‑tat                                                                                                                                   >  2:3079902/1‑126 (MQ=255)

    atatTTAGTTTCATTAATTTATCGCACTTGTATGAATTAGTAA‑GAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAA‑CTTGTAAAAAATAGC‑tttt                                                                                                                                  >  2:14372/1‑128 (MQ=255)

       tttAGTTTCATTAATTTATCGCACTTGTATGAATTAGTAA‑GAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAA‑CTTGTAAAAAATAGC‑ttttttt                                                                                                                               >  2:4130865/1‑128 (MQ=255)

        ttAGTTTCATTAATTTATCGCACTTGTATGAATTAGTAA‑GAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAA‑CTTGTAAAAAATAGC‑tttttttt                                                                                                                              >  2:1502255/1‑128 (MQ=255)

         ttatttCATTAATTTATAGCACTTTTATTTATTATTAATTAAATAAAAAATATT‑TTTTTTTTTATTTTTTTTGTTTTTTCAAATTTTTAAAAAATTAATTTTTA‑CTTGTAAAAAATAGC‑tttttttt‑t                                                                                                                            <  1:2942423/125‑1 (MQ=255)

         tAGTTTCATTAATTTATCGCACTTGTATGAATTAGTAA‑GAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAA‑CTTGTAAAAAATAGA‑tttttttt‑t                                                                                                                            >  1:162654/1‑128 (MQ=255)

         tAGTTTCATTAATCTATCGCACTTGTATGAATTAGTAA‑GAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATTCAAATTTTTAAAAAATTAATTTTAA‑ATTGTAAAAAATAGC‑tttttttt‑t                                                                                                                            >  1:3418699/1‑128 (MQ=255)

            tttCATTAATTTATCGCACTTGTATGAATTAGTAA‑GAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAA‑CTTGTAAAAAATAGC‑tttttttt‑tttt                                                                                                                         >  2:907767/1‑128 (MQ=255)

             ttCATTAATTTAACCCACTTTTATGAATTAGTAA‑GAAACAAAAAATTTTATCTTTTTATATATTTTTTGTTTTTGCAAATTTTTAAAAAAATAATTTGAA‑CTTGTAAAAAATATC‑tttttttt‑ttttt                                                                                                                        <  2:274914/128‑1 (MQ=255)

              tCATTAATTTATCGCACTTGTATGAATTAGTAA‑GAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAA‑CTTGTAAAAAATAGC‑tttttttt‑tttttt                                                                                                                       >  2:1619737/1‑128 (MQ=255)

              tCATTAATTTATCGCACTTGTATGAATTAGTAA‑GAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAA‑CTTGTAAAAAATAGC‑ttttattt‑tttttt                                                                                                                       >  2:3498829/1‑128 (MQ=255)

               taTTAATTTATCGCAATTTGATGAATTAGTAA‑TCACATAAAAAAATTATGTTTTTAGAATTTTTTTTTATATGCAAATTTTTAAAAAATTAATTTGAA‑ATTGTAAAAAAAAGC‑tttttttt‑ttttttt                                                                                                                      <  1:733366/127‑1 (MQ=255)

               cATTAATTTATCGCACTTGTATGAATTAGTAA‑GAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAA‑CTTGTAAAAAATAGC‑tttttttt‑ttttttt                                                                                                                      >  2:3437359/1‑128 (MQ=255)

               cATTAATTTATCGCACTTGTATGAATTAGTAA‑GAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAA‑CTTGTAAAAAATAGC‑tttttttt‑ttttttt                                                                                                                      >  2:3610497/1‑128 (MQ=255)

               cATTAATTTATCGCACTTGTATGAATTAGTAA‑GAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAA‑CTTGTAAAAAATAGA‑tttttttt‑ttttttt                                                                                                                      >  1:58197/1‑128 (MQ=255)

                aTTAATTTATCGCACTTGTATGAATTAGTAA‑GAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAA‑CTTGTAAAAAATAGC‑tttttttt‑tttttttt                                                                                                                     >  2:2441838/1‑128 (MQ=255)

                 ttAATTTATCGCACTTGTATGAATTAGTAA‑GAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAA‑CTTGTAAAAAATAGC‑tttttttt‑ttttttttt                                                                                                                    >  1:3154340/1‑128 (MQ=255)

                 ttAATTTATCGCACTTGTATGAATTAGTAA‑GAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAA‑CTTGTAAAAAATAGA‑tttttttt‑tttttttat                                                                                                                    >  2:2917886/1‑126 (MQ=255)

                     tttATCGCACTTGTATGAATTAGTAA‑GAAACTAAAACTATTATCTTTTTAGATATTTTTTGAATATGCAAATTTTTAAAAAATTAATTTCAA‑CTTGTAAAAAATAGC‑tttttttt‑tttttttttaaaa                                                                                                                >  1:2224625/1‑124 (MQ=255)

                          cGCACTTGTATGAATTAGTAA‑GAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAA‑CTTGTAAAAAATAGC‑‑TTTTTTT‑TTTTTTTTTTTAT‑AAttaa                                                                                                         >  1:3751314/1‑125 (MQ=255)

                           gCACTTGTATGAATTAGTAA‑GAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAA‑CTTGTAAAAAATAGC‑tttttttt‑ttttttttttttttaatta                                                                                                          >  2:1847624/1‑120 (MQ=255)

                           gCACTTGTATGAATTAGTAA‑GAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAA‑CTTGTAAAAAATAGC‑‑TTTTTTT‑TTTTTTTTTTTAT‑AATGTaa                                                                                                        >  2:1101708/1‑128 (MQ=255)

                                tttttGAATTTGTAA‑TAAAATAAAACTATTTTTTTTTTATATTTTTTTTTTATATTTAAATTTTTAAAAAATTAATTTTAA‑CTTGTAAAAAATATC‑‑TTTTTTT‑TTTTTTTTTTTAT‑AATGGAAAtata                                                                                                   <  1:468056/124‑1 (MQ=255)

                                  tATGAATTAGTAA‑GAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAA‑CTTGTAAAAAATAGC‑TTTTTTTT‑TTTTTTTTTTT‑T‑ATTGAAAATATaaa                                                                                                 >  1:3683537/1‑128 (MQ=255)

                                   aTGAATTAGTAA‑GAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAA‑CTTGTAAAAAATA‑‑‑TACTTTTT‑TTTTTTTTTTTAA‑TATGTAAATATAAAtt                                                                                               >  2:457117/1‑128 (MQ=255)

                                    tGAATTAGTAA‑GAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTTAA‑CTTGTAAAAAATAGC‑‑TTTTTTT‑TTTTTTTTTATAT‑AATTGAATAAAAAAtt                                                                                               >  2:3674787/1‑128 (MQ=255)

                                     ttaaatataa‑taaACAAAAAATATTTTTTTTTTTTTTTTTTTTTTTATATTTAAAATTTTTAAAAATTTATTTTTA‑CTTGTAAAAAATTTT‑TTTTTTTT‑TTTTTTTTTTTAT‑AATGGAAATATAAAtt                                                                                               <  1:1993750/121‑1 (MQ=255)

                                     ataattttttttaaaataaaacatTTTTTTTTTTTTTTATTTTTTTTTTTTTCAAATTTTTTAAAAATTAATTTTAA‑ATTTTAAAAAA‑ATT‑GCTTTTTT‑TTTTTTTTTTTAT‑AATGGAAATATAAAtt                                                                                               <  1:3958507/116‑1 (MQ=255)

                                      aaTTAGTAA‑GAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAA‑CTTGTAAAAAATAGC‑TTTTTTTT‑TTTTTTTTTTTAT‑AATTGaaatttaaattt                                                                                              >  1:1419153/1‑128 (MQ=255)

                                       aTTAGTAA‑GAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAA‑CTTGTAAAAAATATC‑‑TTTTTTT‑TTTTTTTTTTTAT‑AATTTAAATAAAAATTTTa                                                                                            >  2:4492000/1‑128 (MQ=255)

                                       aTTAGTAA‑GAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAA‑CTTGTAAAAAATAGC‑‑TTTTTTT‑TTTTTTTTTTTAT‑AATTTAAATATAAAttttt                                                                                            >  2:2346821/1‑127 (MQ=255)

                                       aTTAGTAA‑GAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAA‑CTTGTAAAAAATAGC‑‑TTTTTTT‑TTTTTTTTTTTAT‑AATTTAAAAATAAATTTTa                                                                                            >  1:1523959/1‑128 (MQ=255)

                                             ttataaattaaaattaTTTTTTTTTTTTTTATTTTTTTTTTTAGTTAATTTTTAAAAAAATAATTTTAA‑ATTTTAAAAAATATC‑‑TTTTTTT‑TTTTTTTTTTTAT‑AATGGAAATATAAATTTTAGGTAt                                                                                       <  1:215574/124‑1 (MQ=255)

                                              a‑GAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAA‑CTTGTAAAAAATAGC‑‑TTTTTTT‑TTTTTTTTTTTAT‑AATTTAAATATAAATTTTAGTTAttt                                                                                     >  2:3749991/1‑128 (MQ=255)

                                              a‑GAAAATAAAAATATTATATTTTTTTATATTTTTTTTTTATTTAAATTTTTAAAAAATTAATTTTAA‑ATTTTTAAAAATAGC‑‑TTTTTTT‑TTTTTTTTTTTAT‑AATGGAAATATAAATTTTAGGTAttt                                                                                     <  1:1278504/128‑1 (MQ=255)

                                                 aaactaaaactaTTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAA‑CTTGTAAAAAATAGC‑TTTTTTTT‑TTTTTTTTTTTAT‑AATGTAAATATAAATTTTAGTAAtttt                                                                                    >  2:2136080/1‑128 (MQ=255)

                                                 aaactaaaactaTTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAA‑CTTGTAAAAAATAGC‑‑‑TTTTTT‑TTTTTTTTTTTAT‑AATTTAAATATAAATTTTTGTTAtttttt                                                                                  >  1:231368/1‑126 (MQ=255)

                                                  aaataaaaataTTATATTTTTTTATTTTTTTTTTATATTTAAATTTTTTAAAAATTAATTTTAA‑ATTTTAAAAAATATA‑TTTTTTTT‑TTTTTTTTTTTAT‑AATGGAAATATAAATTTTAGGTATTttg                                                                                   <  2:169986/125‑1 (MQ=255)

                                                   actaaaactaTTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAA‑CTTGTAAAAAATAGC‑‑‑TTTTTT‑TTTTTTTTTTTAT‑AATGTAAATATAAATTTTAGGTATttttttt                                                                                >  2:220617/1‑127 (MQ=255)

                                                   actaaaactaTTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAA‑CTTGTAAAAAATAGC‑‑‑TTTTTT‑TTTTTTTTTTTAT‑AATATAATTATAAAATTTATTTATttttttt                                                                                >  1:2421186/1‑127 (MQ=255)

                                                    ctaaaactaTTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAA‑CTTGTAAAAAATAGC‑‑TTTTTTT‑TTATTTTTTTAAT‑AAAGAAAATATAAATTTTAGGTATTtttttg                                                                                >  1:3630992/1‑128 (MQ=255)

                                                    ataaaaataTTTTCTTTTTTTATATTTTTTTTATATTGAAATTTTTAAAAAATTAATTTTTA‑CATTTAAAAAAAA‑‑‑TCTTTTTT‑TTTTTTTTTTTAT‑AATGGAAATATAAATTTTAGGTATTTtgttgt                                                                               <  1:1924334/127‑1 (MQ=255)

                                                      aaaactaTTTTTTTTTTAGATATTTTTTGTATATGAAAATTTTTAAAAAATTAATTTTTA‑CTTGTAAAAAAT‑‑T‑TCTTTTTT‑TTTTTTTTTTTAT‑AATGGAAATATAAATTTTAGGTATTTTGTTGTCt                                                                             <  1:4411993/128‑1 (MQ=255)

                                                      aaaactaTTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAA‑CTTGTAAAAAATAGC‑TTTTTTAT‑TTTTTTTATTTTT‑AATTGAAATATAAATTTAATTTATTTttttgt                                                                               >  2:2029603/1‑128 (MQ=255)

                                                       aaactaTTTTTTTTTTTTTTTTTTTTTGTTTTATTAATTTTTTAAAAAATTAATTTTTA‑ATTTTAAAAATTA‑‑‑TGTTTTTT‑TTTTTTTTTTTAT‑AATGGAAATATAAATTTTAGGTATTTTGTTGTCTa                                                                            <  2:1971552/128‑1 (MQ=255)

                                                       aaaattttatTTTTTTATTTATTTTTTTTTTATTAATATTTTTAAAAAATTAATTTTAA‑ATTTTAAAAAATA‑‑‑TCTTTTTT‑TTTTTTTTTTTAT‑AATGGAAATATAAATTTTAGGTATTTTGTTGTCTa                                                                            <  1:1794255/122‑1 (MQ=255)

                                                        aaatattttTTTTTTATATTTTTTTTTTTTTTTAAAATTTTTAAAAAATTAATTTTTA‑ATTTTAAAAAAT‑‑T‑TTTTTTTT‑TTTTTTTTTTTAT‑AATGGAAATATAAATTTTAGGTATTTTGTTGTCTaa                                                                           <  1:2650561/125‑1 (MQ=255)

                                                          ctaTTATCTTTTTAGATATTTTTTGTATATTCAAATTTTTAAAAAATTAATTTGAA‑CTTGTAAAAAATAGC‑‑‑TTTTTT‑TTTTTTTTTTTAT‑AATTTAAATATAAATttt‑tgttttttgtttttataata                                                                        >  1:4495117/1‑119 (MQ=255)

                                                            attatCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAA‑CTTGTAAAAAATAGC‑‑TTTTATT‑TTATTTTTTTTAT‑ATTTAAATTAT‑AATTTTATATATttttttttaaatttta                                                                       >  2:1189865/1‑118 (MQ=255)

                                                            attatCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAA‑CTTGTAAAAAATAGC‑‑‑TTTTTT‑TTTTTTTTTTTAT‑AATGTAAATATAAATTTAATTTATTTTTTTTTATAAatat                                                                       >  1:518455/1‑128 (MQ=255)

                                                             ttatCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAA‑CTTGTAAAAAATAGC‑‑TTTTTTT‑TTTTTTTTTTTAT‑AATGAAAATAAAAATTTTAGTTATttttttttaaaattat                                                                       >  1:1346469/1‑118 (MQ=255)

                                                                agtttttATTTTTTTTTTTTATAATCAAATTTTTAAAAAATTTATTTTTT‑CTTTTAAAAAAAATC‑‑TTTTTTT‑TTTTTTTTTTTAT‑AATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCT‑a                                                                   <  1:4284791/126‑1 (MQ=255)

                                                                   tttttatttttttttttATAT‑CAAATTTTTAAAAAATTTTATTGTA‑AATTTTAAAAATTTT‑TTTTTTTT‑TTTTTTTTTTTAT‑AATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCT‑aaaa                                                                <  1:3863483/119‑1 (MQ=255)

                                                                   ttttAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAA‑CTTGTAAAAAATAGC‑TTTTTTTT‑TTTTTTTTTTTAT‑AATTGAATTATAAATTTTTTTTTTTTTTTTGTAAAATTATAT‑aaa                                                                 >  1:2884014/1‑128 (MQ=255)

                                                                   ttttAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAA‑CTTGTAAAAAATAGC‑‑‑TTTTTT‑TTTTTTTTTTTAT‑AATTGAAAAATAAATTTTAGGTTTTTTTTTGTCTAAGTATCT‑aaaaa                                                               >  1:2489831/1‑128 (MQ=255)

                                                                   ttttAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAA‑CTTGTAAAAAATAGC‑‑‑TTTTTT‑TTTTTTTTTTTAT‑AATGTAAATATAAATTTTAGTTATTTTTTTTTATAATTATAT‑aaaaa                                                               >  2:3812878/1‑128 (MQ=255)

                                                                     ttatttatTTTTTGTTTTTTCAAATTTTTTAAAAATTAATTTGAA‑ATTTTAAAAAATA‑‑‑‑TCTTTTT‑TTTTTTTTTTTAT‑AATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCT‑AAAAAA‑At                                                           <  2:1339741/123‑1 (MQ=255)

                                                                       ttatatTTTTTTTATATTTTTATTTTTTAAAAAATAATTTTAA‑TTTTTATAAAATA‑T‑ATTTTTTT‑TTTTTTTTTTTAT‑AATTGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCT‑AAAAAA‑At                                                           <  2:4284968/126‑1 (MQ=255)

                                                                        tatatTTTTTTTTTATTAAAATTTTTAAAAAATTTATTTTAATTTTTTAAAAATTTTT‑TTTTTTTT‑TTTTTTTTTTTAT‑AATGTAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCT‑aaaaaa‑a                                                            <  2:3276361/127‑1 (MQ=255)

                                                                         ttatTTTTTGTTTTTTAAAATTTTTAAAAAATTTATTTGAA‑CTTTTTAAAAATATG‑TTTTTTTT‑TTTTTTTTTTTAT‑AATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCT‑AAAAAA‑ATa                                                          <  1:3495849/127‑1 (MQ=255)

                                                                         atatTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAA‑CTTGTAAAAAATAGC‑TTTTTTTT‑TTTTTTTTTATA‑‑AATGTAAAAAAAAATTATAGTTATTTTTTTTTAAAATTATAa‑aaaaaa‑aaaa                                                         >  1:876397/1‑125 (MQ=255)

                                                                            ttttttGTATATGCAAATTTTTAAAAAATTAATTTGAA‑CTTGTAAAAAATAGC‑‑TTTTTTA‑TTTTTTTTTTAAT‑AATGAAAATATAATTTTTAGTTTTTTTGTTTACTAATTAAAA‑AAAAAA‑Attaaaa                                                      >  2:50049/1‑123 (MQ=255)

                                                                             tttttGTATATGCAAATTTTTAAAAAATTAATTTGAA‑CTTGTAAAAAATAGC‑‑TTTTTTT‑TTTTTTTTTTTAT‑AATGTAAAAAAAAATTTTATTTATTTTTTTTTAAAATTAAAT‑AAAAAA‑Attaaaat                                                     >  1:169339/1‑122 (MQ=255)

                                                                             tttttGTATATGCAAATTTTTAAAAAATTAATTTGAA‑CTTGTAAAAAATAGC‑‑TTTTTTT‑TTTTTTTTTTTAA‑AATTTAAATAAAAATTTTTTTAATTTTTTTTTATAAATATCT‑AAAAAA‑ATatatat                                                     >  1:1157827/1‑123 (MQ=255)

                                                                             tttttGTATATGCAAATTTTTAAAAAATTAATTTGAA‑CTTGTAAAAAATAGC‑‑‑TTTTTT‑TTTTTTTTTTTAA‑AATGAAAATATAAATTTTATTAATTTTTTTTTATAATTATAT‑AAAAAA‑ATATaaata                                                    >  2:4358917/1‑126 (MQ=255)

                                                                                ttGTATATGCAAATTTTTAAAAAATTAATTTGAA‑CTTGTAAAAAATAGC‑‑TTTTTTT‑TTTTTTTTTTTAT‑ATTGTAATTAAAAATTTTATTTTTTTTTTTTTATAATTATAA‑AAAAAA‑TTAaaaataaa                                                  >  2:2589015/1‑124 (MQ=255)

                                                                                 tttattttaaaaTTTTTTAAATATTAATTTTTA‑TTTTTAAAAAAT‑TT‑TTTTTTTT‑TTTTTTTTTTTAT‑AATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCT‑AAAAAA‑ATAGAAAGGaaa                                                 <  2:3914930/119‑1 (MQ=255)

                                                                                 tGTATATGCAAATTTTTAAAAAATTAATTTGAA‑CTTGTAAAAAATAGC‑‑TTTTTTT‑TTTTTTTTTTTAT‑AATTAAAATAAAATTTTTAGTTTTTTTTTTTTATATTTATAA‑AAAAAA‑AAAAAAAGTaaa                                                 >  1:1003325/1‑128 (MQ=255)

                                                                                 tGTATATGCAAATTTTTAAAAAATTAATTTGAA‑CTTGTAAAAAATAGC‑‑‑TTTTTT‑TTTTTTTTTTTAT‑AATTTAAAAATAAATTTTAATTATTTTTTTTTATAATTAAAT‑AAAAAA‑AAAAAAATGaaaa                                                >  2:1263571/1‑128 (MQ=255)

                                                                                    tttttaaatttttTAAAAATTTAATTTAAA‑TTTTTAAAAATT‑‑T‑TTTTTTTT‑TTTTTTTTTTTAT‑AATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCT‑AAAAAA‑ATAGAAAGGAAAAAa‑t                                            <  2:2503564/119‑1 (MQ=255)

                                                                                     tattaaaaTTTTTTAAAAATTAATTTTTA‑ATTTTATAAAAT‑TT‑GTTTTTTT‑TTTTTTTTTTTAT‑AATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCT‑AAAAAA‑ATAGAAAGGAAAAAa‑t                                            <  1:4120381/123‑1 (MQ=255)

                                                                                       tGCAAATTTTTAAAAAATTAATTTGAA‑CTTGTAAAAAATAGC‑TTTTTTTTATTTATATTTTTAA‑AATTAAAATATAATTTTTTTTTATTTTTTTTTAAATTTATAA‑ATAAAA‑ATAAAAATTAAAAAa‑t                                            >  2:3194821/1‑128 (MQ=255)

                                                                                       tGCAAATTTTTAAAAAATTAATTTGAA‑CTTGTAAAAAATAGC‑‑TTTTTTT‑TTTTTTTTTTTAT‑AATGTAAATATAAATTTTTGGTTTTTTGTTGTATATGTATCT‑AAAAAA‑ATTTAAAGGAAAAAa‑tat                                          >  1:3807888/1‑128 (MQ=255)

                                                                                         cAAATTTTTAAAAAATTAATTTGAA‑CTTGTAAAAAATAGC‑‑TTTTTTT‑TTTTTTTTTTTAT‑TATGGAAATATAAATTTTTGTTATTTTTTTGTATATTTTTAT‑AAAAAA‑ATATAAAGTAAAAAA‑TAttt                                        >  2:3372509/1‑127 (MQ=255)

                                                                                         cAAATTTTTAAAAAATTAATTTGAA‑CTTGTAAAAAATAGC‑‑TTTTTTT‑TTTTTTTTTTTAT‑AATGGAAATATAAATTTTTGTTTATTTTTTGTCTATTTATAT‑AAAAAA‑AAATAATATAAAAAA‑TAttt                                        >  1:3029777/1‑127 (MQ=255)

                                                                                            aTTTTTAAAAAATTAATTTGAA‑CTTGTAAAAAATATC‑‑TTTTTTT‑TTTTTTTTTTTAT‑AATTGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCT‑AAAAAA‑ATAGAAAGGAAAAAA‑TATTGTTa                                     <  2:3863025/128‑1 (MQ=255)

                                                                                            aTTTTTAAAAAATTAATTTGAA‑ATTGTAAAAAATAGC‑‑GTTTTTT‑TTTTTTTTTTTAT‑AATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCT‑AAAAAA‑ATAGAAAGGAAAAAA‑TATTGTTa                                     <  2:3561703/128‑1 (MQ=255)

                                                                                             ttttAAAA‑AATTAATTTGAA‑CTTGTAAAAAATAGC‑‑TTTTTTT‑TTTTTTTTTTTAT‑AATTAAAAAATAATTTTTATTTTTTTTTTTTGTTAATTATAT‑AAAAAA‑ATAAAAAATAAAAAA‑ATTTTTTaaa                                   >  1:1111596/1‑128 (MQ=255)

                                                                                               ttttaaaaatttattTTAA‑ATTTTTAAAAATA‑‑‑TTATTTTT‑TTTTTTTTTTTAT‑AATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCT‑AAAAAA‑ATAGAAAGGAAAAAA‑TATTGTTAAAAg                                 <  2:844837/121‑1 (MQ=255)

                                                                                                ttaaaaaaTTAATTTGAA‑CTTGTAAAAAATAGCTTTTTTTTT‑TTTTTTTTTTTTT‑ATTGTAAATATTAATTTTTTTTTATTTTTTTTTTAATTAAAA‑AAATAA‑AAAGAAAGTAAAAAA‑TATT‑TTaaaa                                  >  1:2589179/3‑128 (MQ=255)

                                                                                                ttaaaaaaTTAATTTGAA‑CTTGTAAAAAATAGC‑TTTTTTTT‑TTTTTTTTTTT‑T‑ATTTAAAATTTAATTTTTA‑TTATTTTTTTTTTTAATTTTTT‑AAAAAA‑ATATAAAAGAAAAAATTATTTTTaaatt                                 >  2:2991331/3‑126 (MQ=255)

                                                                                                    aaaattaattTTAA‑ATTTTAAAAAA‑A‑T‑TATTTTTT‑TTTTTTTTTTTAT‑AATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCT‑AAAAAA‑ATAGAAAGGAAAAAA‑TATTGTTAAAAGTAATa                            <  1:4033969/126‑1 (MQ=255)

                                                                                                     aaatttattTTAA‑TTTTTAAAAAATA‑T‑TTTTTTTT‑TTTTTTTTTTTAT‑AATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCT‑AAAAAA‑ATAGAAAGGAAAAAA‑TATTGTTAAAAGTAATa                            <  1:953338/127‑1 (MQ=255)

                                                                                                      aattaattTGAA‑CTTGTAAAAAATAGC‑TTTTTTTT‑TTTTTTTTTTTTT‑AATGGAAATATAATTTTTA‑TTTTTTTTTTTTTAAATTTTATAAAAAAA‑ATAAAAATAAAAAAA‑TATTTTTAAAATTaaaa                            >  1:2791631/1‑126 (MQ=255)

                                                                                                        ttaattTGAA‑CTTGTAAAAAATAGC‑TTTTTTTT‑TTTTTTTTTTTAT‑AATGGAAATATAAATTTTAGGTTTTTTGTTGTCTAAGTATCT‑AAAAAA‑ATAGAAAGGAAAAAA‑TATTGTTAAAAGTAATaat                          >  2:2847958/1‑126 (MQ=255)

                                                                                                        ttaattTGAA‑CTTGTAAAAAATAGC‑‑TTTTTTT‑TTTTTTTTTTTAT‑AATGTAAATATAAATTTTAGTTATTTTTTTGACTAATTATAA‑AAAAAA‑ATAAAAAGGAAAAAA‑TATTTTTAAAATTATTACTa                         >  1:3574998/1‑128 (MQ=255)

                                                                                                        ttaattTGAA‑CTTGTAAAAAATAGC‑‑‑TTTTTT‑TTTTTTTTTTTAT‑AATGGAAATATAATTTTTAGTTATTTTTTTTTATAATTATAT‑AAAAAA‑ATAGAATGGAAAAAA‑TTTTTTTaaattaaataataa                        >  2:4203154/1‑117 (MQ=255)

                                                                                                         taattTGAA‑CTTGTAAAAAATAGC‑TTTTTTTT‑TTTTTTTTTTTTTAAATTGAAAAATAATTTTTATTAATTTATTTGTATAATTATAT‑AAAAAATATA‑TAATGAAAAAA‑TTTTTTTAAAAGTATTata                          >  2:4060718/1‑126 (MQ=255)

                                                                                                         taattTGAA‑CTTGTAAAAAATAGC‑‑TTTTTTT‑TTTTTTTTTTTAT‑AATGTAAATATAAATTTTAGGTATTTTGTTGTATAATTATAT‑AAAAAA‑ATATAAAGGAAAAAA‑TATAGTTAAATGTATTACTaa                        >  2:737772/1‑128 (MQ=255)

                                                                                                           attTGAA‑CTTGTAAAAAATA‑‑‑TCTTTTTT‑TTTTTTTTTTTAT‑AATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCT‑AAAAAA‑ATAGAAAGGAAAAAA‑TATTGTTAAAAGTAATACTAAAat                     <  2:545211/128‑1 (MQ=255)

                                                                                                               gAA‑CTTGTAAAAAATAGC‑‑TTTTTTT‑TTTTTTTTTTTAT‑AATGGAAATATAAATTTTATTTATTTTTTTTTATATTTATAT‑TAAAAA‑ATTTAAATGAAAAAA‑TATTTTTAATATTAATAAAAAAaatat                  >  2:665387/1‑128 (MQ=255)

                                                                                                               gAA‑CTTGTAAAAAATAGC‑‑‑TTTTTT‑TTTTTTTTTTTAT‑AATGGAAATATAAATTTTAGGTTTTTTGTTGTCTAAGTTTCT‑AAAAAA‑TTATAAAGGAAAAAA‑TATTTTTAAAAGTATAACTAAAattatt                 >  1:3278704/1‑128 (MQ=255)

                                                                                                                tatattGTAAAAAAT‑TT‑TTTTTTTT‑TTTTTTTTTTTAT‑AATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCT‑AAAAAA‑ATAGAAAGGAAAAAA‑TATTGTCAAAAGTAATACTAAAattat                  <  2:22592/124‑1 (MQ=255)

                                                                                                                aa‑CTTGTAAAAAATAGC‑TTTTTTTT‑TTTTTTTTTTAAT‑‑TTTAAAATAAAATTTTTTTTTATTTTTTTGTATTATTAAAT‑AAAAAA‑A‑AAAAATTAAAAAA‑TTTTTTTAAA‑‑TAATAAAAAAAATATTTat              >  1:4199781/1‑127 (MQ=255)

                                                                                                                   cTTGTAAAAAATAGC‑TTTTTTTT‑TTTTTTTTTTT‑T‑AATTGAAATATAAATTTTAGGTATTTTTTTGTATATTTAAAT‑AAAAAA‑ATATAAAGGAAAAAA‑TATTTTTAAAATTTATACTAAAATTAtttt               >  2:1896300/1‑127 (MQ=255)

                                                                                                                      gTAAAAAATAGC‑‑TTTTTTT‑TTTTTTTTTTTAT‑AATTGAAATATAAATTTTAGGTATTTTGTTGTATAATTATAT‑AAAAAA‑ATAGAAAGTAAAAAA‑TTTTTTTAAAAGTAATACTAAAATTATTTAAtt            >  2:2657796/1‑127 (MQ=255)

                                                                                                                       tAAAAAATAGC‑‑‑‑TTTTT‑TTTTTTTTTTTAT‑AATGTAAATATAAATTTTAGTTTTTTTGTTGTATAATTATAT‑AAAAAA‑ATATAAAGGAAAAAA‑TATTGTTAAAATTAATAATAAAATTATTTAATTtta         >  2:4005656/1‑128 (MQ=255)

                                                                                                                             aTAGC‑‑TTTTTTT‑TTTTTTTTTTTAA‑ATGGGAAATATAAATTTTAGGTATTTTGTTTTCTAAGTATGT‑AAAAAA‑ATAGAAATGAAAAAA‑TTTTGTTAATAGTAATACTAAAATTATTTAATGttaataa     >  2:1031285/1‑126 (MQ=255)

GATAATATTTAGTTTCATTAATTTATCGCACTTGTATGAATTAGTAA‑GAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTAAAAGAATTAATTTGAA‑CTTGTAAAAAATAGC‑TTTTTTTT‑TTTTTTTTTTTAT‑AATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCT‑AAAAAA‑ATAGAAAGGAAAAAA‑TATTGTTAAAAGTAATACTAAAATTATTTAATGTTAATTAAAA  >  CP016816/165122‑165376

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 14 ≤` `ATCG/ATCG` `< 15 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 36 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.