| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP016816 | 311149 = | 390 (0.180) | 539 (0.300) | 88/216 | 28.5 | 64.1% | intergenic (‑72/‑242) | JCVSYN2_01300/JCVSYN2_01305 | hypothetical protein/30S ribosomal protein S21 |
| ? | CP016816 | = 311156 | 269 (0.150) | intergenic (‑79/‑235) | JCVSYN2_01300/JCVSYN2_01305 | hypothetical protein/30S ribosomal protein S21 | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
Only 100 of 775 total aligned reads displayed.
TTGTAATAACTAATCCAAATGAACTTAAAATTGTAAT‑TAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑‑‑‑‑TAT‑‑‑‑ATATAT‑‑‑‑ATATATATATATATATA‑‑‑‑A‑T‑‑‑GCAATATGTAAATGAAAATATGGTATAATAGCAAC‑CGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTATTTTTATTTAAAAAAGTA > CP016816/311029‑311283 | ttGTAATAACTAATCCAAATGAACTTAAAATTGTAAT‑TAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑‑‑‑‑tat‑‑‑‑atata > 2:405875/1‑128 (MQ=255) ataaCTAATCCAAATGAACTTAAAATTGTAAT‑TAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACTATTCAAAAAATATATAACATACATTCAT‑‑‑‑‑‑‑‑tat‑‑‑‑ataaat‑‑‑‑atat > 2:1702439/1‑128 (MQ=255) ataaCTAATCCAAATGAACTTAAAATTGTAAT‑TAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑‑‑‑‑tat‑‑‑‑atatat‑‑‑‑atat > 2:4012297/1‑128 (MQ=255) ataaCTAATCCAAATGAACTTAAAATTGTAAT‑TAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑‑‑‑‑tat‑‑‑‑atatat‑‑‑‑atat > 1:3755200/1‑128 (MQ=255) cTAATCCAAATGAACTTAAAATTGTAAT‑TAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑‑‑‑‑tat‑‑‑‑atatat‑‑‑‑atatatat > 1:4416157/1‑128 (MQ=255) tAATCCAAATGAACTTAAAATTGTAAT‑TAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑‑‑‑‑tat‑‑‑‑atatat‑‑‑‑atatatata > 1:2707761/1‑128 (MQ=255) attaaaaaaGAAATTAAAA‑TATAATATAAATTTTTAATATTAAACAAACATTATTAAAAAATAAAATATTTTTTATAAAATATTAAAAAAATATATAAAAAAAATTAAT‑‑‑‑‑‑‑‑tat‑‑‑‑atatat‑‑‑‑atatatatat < 1:418169/123‑1 (MQ=255) attCCAAATTAAATTAAAATTGTTAT‑TAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑‑‑‑‑tat‑‑‑‑atatat‑‑‑‑atatatatat < 1:1215338/126‑1 (MQ=255) aaTCCAAATGAACTTAAAATTGTAAT‑TAACTATTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑‑‑‑‑aaa‑‑‑‑atatat‑‑‑‑atatatatat > 2:3168121/1‑128 (MQ=255) aTCCAAATGAACTTAAAATTGTAAT‑TAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑‑‑‑‑tat‑‑‑‑atatat‑‑‑‑atatatatata > 2:3478114/1‑128 (MQ=255) aTCCAAATGAACTTAAAATTGTAAT‑TAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATACAAAACATATATAACATACATTCAT‑‑‑‑‑‑‑‑tat‑‑‑‑atatat‑‑‑‑atatatatata > 2:48793/1‑128 (MQ=255) tCCAAATGAACTTAAAATTGTAAT‑TAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACTATTCAAAACATATATAACATACATTCAT‑‑‑‑‑‑‑‑tat‑‑‑‑atatat‑‑‑‑atatatatatat > 1:3481620/1‑128 (MQ=255) tCCAAATGAACTTAAAATTGTAAT‑TAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑‑‑‑‑tat‑‑‑‑atatat‑‑‑‑atatatatatat > 2:1119624/1‑128 (MQ=255) tCCAAATGAACTTAAAATTGTAAT‑TAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑‑‑‑‑tat‑‑‑‑atatat‑‑‑‑atatatatatat > 1:2438817/1‑128 (MQ=255) tCCAAATGAACTTAAAATTGTAAT‑TAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑‑‑‑‑tat‑‑‑‑atatat‑‑‑‑atatatatatat > 1:2791/1‑128 (MQ=255) ccAAATGAACTTAAAATTGTAAT‑TAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATAATTTTTACATACGATTAAAAAAATATATAACATACATTCAT‑‑‑‑‑‑‑‑tat‑‑‑‑atatat‑‑‑‑atatatatatata > 1:3002743/1‑128 (MQ=255) ataaaTGAAATTAAAATTGTATA‑TAAATTTTTAATTTTACACACCCCTTATTAAAAAATAAAATATTTTTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑‑‑‑‑tat‑‑‑‑atatat‑‑‑‑atatatatatata < 1:3560810/126‑1 (MQ=255) aaaaaTGAAATTAAAATTTTAAT‑TATTTTTTTTATTTTTCACAACCCTTATATAAAAATAAAATACTTTTTAGATAAGATTAAAAAAATATATAACATACATTCTT‑‑‑‑‑‑‑‑tat‑‑‑‑atatat‑‑‑‑atatatatatata < 1:3351945/126‑1 (MQ=255) cAAATGAACTTAAAATTGTAAT‑TAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑‑‑‑‑tat‑‑‑‑atatat‑‑‑‑atatatatatatat > 1:1920235/1‑128 (MQ=255) aaaataaaatAAAATAGTAAA‑TAACTTTTTAATTTTACACACACCATATTAAAAAAAAAAAAAAAATTTAAATAATATTCAAAACATATATAACATACAATCAA‑‑‑‑‑‑‑‑tat‑‑‑‑atatat‑‑‑‑atatatatatatata < 2:643828/119‑1 (MQ=255) aaaTCAACTAAAAATAGTAAT‑AAACTTTTTCATTTTACACACAACATATTAAAAAATAAAATACATGTTACATACTATTCAAAACATATATAAAATACATTCAA‑‑‑‑‑‑‑‑tat‑‑‑‑atatat‑‑‑‑atatatatatatata < 2:4172842/128‑1 (MQ=255) aaTGAACTTAAAATTGTAAT‑TAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑‑‑‑‑tat‑‑‑‑atatat‑‑‑‑atatatatatatatat > 2:2637219/1‑128 (MQ=255) aaTGAACTTAAAATTGTAAT‑TAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATAATTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑‑‑‑‑tat‑‑‑‑atatat‑‑‑‑atatatatatatataa > 1:3286351/1‑127 (MQ=255) attaaCTTAAAAATGTTAT‑TTATTTTTTTATTTTTAAAACACATTATTAAAAAAAAAAATAATTTTTATATAATATTCAAAAAATATATAAAATACATTAAT‑‑‑‑‑‑‑‑tat‑‑‑‑atatat‑‑‑‑atatatatatatatata < 1:655300/125‑1 (MQ=255) tGAACTTAAAATTGTAAT‑TAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAATTACTTGTTACATACGATTCATAACATATATAACATACCTTCAT‑‑‑‑‑‑‑‑tat‑‑‑‑atatat‑‑‑‑atatatatatatatatat > 1:3068890/1‑127 (MQ=255) tGAACTTAAAATTGTAAT‑TAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑‑‑‑‑tat‑‑‑‑atatat‑‑‑‑atatataaatatatatat > 2:1752984/1‑127 (MQ=255) tGAACTTAAAATTGTAAT‑TAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑‑‑‑‑taa‑‑‑‑atatat‑‑‑‑atatatatatatatatat > 2:2734310/1‑127 (MQ=255) aacaaaaaaTTGTAAT‑TAACTTTTTCAATTTACACACACAATATTAAAAAATAAAAAAATTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑‑‑‑‑tat‑‑‑‑atatat‑‑‑‑atatatatatatatatatat < 2:1047181/123‑4 (MQ=255) aaCTTAAAATTGTAAT‑TAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAATTACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑‑‑‑‑tat‑‑‑‑atatat‑‑‑‑atatatatatatatatatat > 2:4515800/1‑125 (MQ=255) taagatatttGTATT‑TAAATTTTTTATATTATACACAAATTATTAAAAAATAAAATAATTTTTAAATATTATTAAAAAAATATATATAATACATTATT‑‑‑‑‑‑‑‑tat‑‑‑‑atatat‑‑‑‑atatatatatatatatatata < 1:770290/120‑5 (MQ=255) attAAAATTTTATT‑TATATTTTTTATTTTAAAAAAAAATTATTAAAAAATAAAATAATTTTTATATAATATTAAAAAAATATATAAAATAAATTAAT‑‑‑‑‑‑‑‑tat‑‑‑‑atatat‑‑‑‑atatatatatatatatatatat < 1:459857/127‑6 (MQ=12) ttATAATTTTTAT‑TAAATTTTTATTTTTATACACAACTTATTAAAAAATAAAATAATTTTTATATAATATTTAAAAAATATATAACATATATTCAT‑‑‑‑‑‑‑‑tat‑‑‑‑atatat‑‑‑‑atatatatatatatatatatata < 1:3184010/128‑7 (MQ=255) ttAAAATTGTAAT‑TAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑‑‑‑‑tat‑‑‑‑atatat‑‑‑‑atatatatatatatatatataaa > 2:396669/1‑122 (MQ=255) ttGTAAT‑TAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑‑‑‑‑tat‑‑‑‑atatat‑‑‑‑atatatatatatatatatatataattata > 1:3972928/1‑116 (MQ=255) aaCTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCATTA‑‑‑‑‑‑TAT‑‑‑‑ATATAT‑‑‑‑ATATATATATATATATA‑‑‑‑A‑T‑‑‑TCAATAAGTaaaaaaa > 2:3239467/1‑124 (MQ=255) aCTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCATTATA‑‑‑‑TAT‑‑‑‑ATATAT‑‑‑‑ATATATATATATATATA‑‑‑‑A‑T‑‑‑GCAATATATAAATGa > 2:3861711/1‑128 (MQ=255) cTTTTTAATTTTAAACACACATTATTAAAAAATAAAATATTTGTTATATACTATTAAAAAAATATATAACATAAATTCATTATA‑‑‑‑TAT‑‑‑‑ATATAT‑‑‑‑ATATATATATATATATA‑‑‑‑A‑T‑‑‑GCAATATGTAAATGaa < 2:2515271/128‑1 (MQ=255) taaTTTTACACAAAACTTTTTAAAAAATAAAATAATTTTTACATAATATTAAAAAAATATATAACATACATTCATTATATA‑‑TAT‑‑‑‑ATATAT‑‑‑‑ATATATATATATATATA‑‑‑‑A‑T‑‑‑GCAATATGTAAATGAAAat < 1:3806283/126‑1 (MQ=255) ttACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCATTATA‑‑‑‑TAT‑‑‑‑ATATAT‑‑‑‑ATATATATATATATATA‑‑‑‑A‑T‑‑‑GAAATATTTAAATGAAAatattttat > 2:3798203/1‑123 (MQ=38) ttAAACAACCATTATTAAAAAATAAAATAATTGTTAAATACTATTCAAAACATATATAACATACATTCATTATA‑‑‑‑TAT‑‑‑‑ATATAT‑‑‑‑ATATATATATATATATA‑‑‑‑A‑T‑‑‑GCAATATGTAAATGAAAATATGGtat < 1:1559260/128‑1 (MQ=255) taaacaaaacTTATTAAAAAATTATATATTTGTTACATAAGATTCAAAAAATATATAACATACATTCATTATATA‑‑TAT‑‑‑‑ATATAT‑‑‑‑ATATATATATATATATA‑‑‑‑A‑T‑‑‑GCAATATGTAAATGAAAATATGGta < 2:4293855/119‑1 (MQ=255) acacaaattattaAAAAATAAAATAATTGTTACATAATATTAAAAAAATATATAAAATAAATTCATTATATA‑‑TAT‑‑‑‑ATATAT‑‑‑‑ATATATATATATATATA‑‑‑‑A‑T‑‑‑GCAATATGTAAATGAAAATATGGTataa < 1:1698721/121‑1 (MQ=255) aacaaattattaAAAAATATAATAATTTTTATATAATATTCAAAAAATATATAAAATAAATTCATTATATA‑‑TAT‑‑‑‑ATATAT‑‑‑‑ATATATATATATATATA‑‑‑‑A‑T‑‑‑GCAATATGTAAATGAAAATATGGTataat < 2:2412803/122‑1 (MQ=255) actacTTATTAAAAAATAAAATATTTTTTAGATATTATTAAAAAAATATATAACATAAATTAATTATATATATAT‑‑‑‑ATATAT‑‑‑‑ATATATATATATATATA‑‑‑‑A‑T‑‑‑GCAATATGTAAATGAAAATATGGTataa < 1:1458218/124‑1 (MQ=16) acaccTTATTAAAAAATAAAATAATTTTTAAATAATATTAAAAAAATATATAAAATAAATTCATTATATA‑‑TAT‑‑‑‑ATATAT‑‑‑‑ATATATATATATATATA‑‑‑‑A‑T‑‑‑GCAATATGTAAATGAAAATATGGTataata < 1:510552/125‑1 (MQ=255) acCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCATTA‑‑‑‑‑‑TAT‑‑‑‑ATATAT‑‑‑‑ATATATATATATATATA‑‑‑‑A‑T‑‑‑GATATATATAAATAAATATATTATataatataaa > 2:1965863/1‑124 (MQ=255) aacattattaAAAAATAAAATAATTTTTAAATAATATTATAAAAATATATAACATATATTTATTATATA‑‑TAT‑‑‑‑ATATAT‑‑‑‑ATATATATATATATATA‑‑‑‑A‑T‑‑‑GCAATATGTAAATGAAAATATGGTATAATAg < 2:67683/124‑1 (MQ=255) ttattaAAAAATAAAATACTTTTTTAATTCTATTCTAAAAATATATAAAATTCAATCAT‑‑‑‑‑‑‑‑TAT‑‑‑‑ATATATATAAATATATATATATATATA‑‑‑‑A‑T‑‑‑GCAATATGTAAATGAAAATATGGTATAATAGCAAC‑Cg < 2:2306156/128‑1 (MQ=255) tattaAAAAATAAAATATTTTTTATATAATATTCAAAAAATATATAAAATAGATTCATTATATA‑‑TAT‑‑‑‑ATATAT‑‑‑‑ATATATATATATATATA‑‑‑‑A‑T‑‑‑GCAATATGTAAATGAAAATATGGTATAATAGCAAc‑c < 1:429406/128‑1 (MQ=255) taAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑‑‑‑‑TAT‑‑‑‑ATATAT‑‑‑‑ATATATATATATATATAT‑‑‑A‑TAAAGCAATATATAAAAAAAAATATTGTaaaataaaaacatttta > 2:1473630/1‑117 (MQ=255) taAAAAATAAAATAATTTTTAAATAATATTAAAAACATATATAACATACATTCATTATATA‑‑TAT‑‑‑‑ATATAT‑‑‑‑ATATATATATATATATA‑‑‑‑A‑T‑‑‑GCAATATGTAAATGAAAATATGGTATAATAGCAAC‑CGtt < 2:1339732/128‑1 (MQ=255) aaaaaaTAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCATTATA‑‑‑‑TAT‑‑‑‑ATATAT‑‑‑‑ATATATATATATATATA‑‑‑‑A‑T‑‑‑GAAATATGTAAATGAAAATATGGTATAATAGAAAC‑AGTatat > 1:1313070/1‑128 (MQ=37) aaaatataatAATTTTTAAATAAGATTCAAAAAATATATAACAAAAATTCATTATATA‑‑TAT‑‑‑‑ATATAT‑‑‑‑ATATATATATATATATA‑‑‑‑A‑T‑‑‑GCAATATGTAAATGAAAATATGGTATAATAGCAAC‑CGTTtat < 2:3361883/128‑1 (MQ=255) taaaataCTTGTTACATACGATTCAAAACATATATAACATACATTCATTATA‑‑‑‑TAT‑‑‑‑ATATAT‑‑‑‑ATATATATATATATATA‑‑‑‑A‑T‑‑‑TCAATATATAAATAAAAATATTTTATAATAGCAAA‑AGTTTATAAAGTa > 1:1981757/1‑128 (MQ=255) aaaataCTTTATAAATAATATTCAAAACATATATAACATAAATTCATTATATA‑‑TAT‑‑‑‑ATATAT‑‑‑‑ATATATATATATATATA‑‑‑‑A‑T‑‑‑GCAATATGTAAATGAAAATATGGTATAATAGCAAC‑CGTTTATAAAGt < 2:1626957/128‑1 (MQ=255) aaataCTTGTTACATACGATTCAAAACATATATAACATACATTCATTATA‑‑‑‑TAT‑‑‑‑ATATAT‑‑‑‑ATATATATATATATATA‑‑‑‑A‑T‑‑‑GCAATATGTAAATGAAAATATGGTATAATAGCAAC‑CGTTTATAAAGTaaa < 2:3912409/128‑1 (MQ=255) aaataATTGTTACATACGATTAAAAACATATATAACATACATTCAT‑‑‑‑‑‑‑‑TAT‑‑‑‑ATATAT‑‑‑‑ATATATATATATATATA‑‑‑‑A‑T‑‑‑GCAATATGTAAATGAAAATATGGTATAATAGCAAC‑CGTTTATAAAGTaaaaaaa < 1:179007/128‑1 (MQ=255) aatttttACATAATATTCAAAACATATATAAAATACATTCATTATA‑‑‑‑TAT‑‑‑‑ATATAT‑‑‑‑ATATATATATATATATA‑‑‑‑A‑T‑‑‑GCAATATGTAAATGAAAATATGGTATAATAGCAAC‑CGTTTATAAAGTaaaaaaa < 2:57004/123‑1 (MQ=255) cTTGTTACATACGATTCAAAACATATATAACATACATTCATTATATA‑‑TAT‑‑‑‑ATATAT‑‑‑‑ATATATATATATATATA‑‑‑‑A‑T‑‑‑GAAATATATAAATGAAAATATATTATAATATCAAA‑AGTTTATAAATTaaaaaa > 2:3712971/1‑128 (MQ=19) cTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑‑‑‑‑TAT‑‑‑‑ATATAT‑‑‑‑ATATATATATATATATATAT‑A‑TAAAAAAATATTTAAATGAAAATATTTTATAATAGAAAC‑AATTTATAAATTaaaaaa > 1:2309411/1‑128 (MQ=255) tttttagataataTTTAAAACATATATATCAAACATTAATTA‑‑‑‑‑‑TAT‑‑‑‑ATATAT‑‑‑‑ATATATATATATATATA‑‑‑‑A‑T‑‑‑GCAATATGTAAATGAAAATATGGTATAATAGCAAC‑CGTTTATAAAGTAAAAAAATAGt < 1:4069959/116‑1 (MQ=255) ttGTTACATACGATTCAAAACATATATAACATACATTCATTATATATATAT‑‑‑‑ATATAT‑‑‑‑ATATATATATATATATA‑‑‑‑A‑T‑‑‑TCAATATATAAATAAAAATATTTTATAATATAAAC‑AGTTTATAAAGTaaaaa > 2:4378464/1‑128 (MQ=255) ttGTTACATACGATTCAAAACATATATAACATACATTCATTATATA‑‑TAT‑‑‑‑ATATAT‑‑‑‑ATATATATATATATATA‑‑‑‑A‑T‑‑‑AAAATATTTAAATTAAAATATTATATAATATAAAC‑AATTTATAAAATaaaaaaa > 1:2636240/1‑128 (MQ=255) ttGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑‑‑‑‑TAT‑‑‑‑ATATAT‑‑‑‑ATATATATATATATATATTTTA‑T‑‑‑GATATATATAAATAAATATATAATATAATA‑CAACAAGTTTATATATAAAAAAAATa > 1:1098430/1‑128 (MQ=255) ttGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑‑‑‑‑TAT‑‑‑‑ATATAT‑‑‑‑ATATATATATATATATATAT‑ATT‑‑‑TAAATATGTAAATTAAAATATGTTATAATAGCTAC‑CGTTTATAAATTAAAAAAATa > 1:724481/1‑128 (MQ=255) ttGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑‑‑‑‑TAT‑‑‑‑ATATAT‑‑‑‑ATATATATATATATATATAT‑A‑TAAATAAATATTTAAAATAAAATATTGTATAATAAAAAC‑CTTTTATAAATaaaaaaaa > 1:2552657/1‑128 (MQ=255) tGTTACATACGATTCAAAACATATATAACATACATTCATTATATA‑‑TAT‑‑‑‑ATATAT‑‑‑‑ATATATATATATATATA‑‑‑‑A‑T‑‑‑GAAATATTTAAATGAAAATATGTTATAATAGCAAA‑AGTTTATAAATTAAAAAAAt > 1:2186214/1‑128 (MQ=25) ttACATACGATTCAAAACATATATAACATACATTCATTATA‑‑‑‑TAT‑‑‑‑ATATAT‑‑‑‑ATATATATATATATATA‑‑‑‑A‑T‑‑‑GCAATATTTAAAAGAAAATATGGTATAATATCCAC‑CGGTTATAAAGTAAAAAAATACTa > 1:4119721/1‑128 (MQ=255) tACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑‑‑‑‑TAT‑‑‑‑ATATAT‑‑‑‑ATATATATATATATATATAT‑A‑TAAATCAATATATAAATCAAAATATGATATAATATAAAA‑AGTTAATAAAATAAAAAAATAga > 1:1610972/1‑127 (MQ=255) cATACGATTCAAAACATATATAGCATACATTCATTATATA‑‑TAT‑‑‑‑ATATAT‑‑‑‑ATATATATATATATATA‑‑‑‑A‑T‑‑‑TAAATATATAAAATAAAATATTTTATAATATCAAA‑CTTTTATAAATAAAAAAAATAGTaa > 1:100063/1‑128 (MQ=16) aataTTAAAAACATATATAACATAGATTCATTATATA‑‑TAT‑‑‑‑ATATAT‑‑‑‑ATATATATATATATATA‑‑‑‑A‑T‑‑‑GCAATATGTAAATGAAAATATGGTATAATAGCAAC‑CGTTTATAAAGTAAAAAAATAGTAAata < 2:3646802/125‑1 (MQ=255) aCGATTCAAAACATATATAACATACATTCATTATA‑‑‑‑TAT‑‑‑‑ATATAT‑‑‑‑ATATATATATATATATA‑‑‑‑A‑T‑‑‑GCAATATGTAAATGAAAATATGGTATAATAGCAAC‑CGTTTATAAAGTAAAAAAATAGTAAAtata < 2:3538599/128‑1 (MQ=255) cGATTCAAAACATATATAACATACATTCAT‑‑‑‑‑‑‑‑TAT‑‑‑‑ATATAT‑‑‑‑ATATATATATATATATAT‑‑‑ACT‑‑‑GCAATATGTAAATGAAAATATGTTATATTAGAAAA‑CGTTTATAAATAAAAAAAATAGTATATataata > 1:2223403/1‑128 (MQ=255) gATTCAAAACATATATAACATACATTCATTATATA‑‑TAT‑‑‑‑ATATAT‑‑‑‑ATATATATATATATATA‑‑‑‑A‑T‑‑‑TCAATATGTAAATGAAAATATTTTATAATAGCAAC‑ATTTTATAAATAAAAAAAATATAAAAaata > 1:3667760/1‑128 (MQ=255) ttCAAAACATATATAACATACATTCAT‑‑‑‑‑‑‑‑TAT‑‑‑‑ATATAT‑‑‑‑ATATATATATATATATATAT‑A‑TAAAACAATATGTAAATTAATATATTATATAATAGAAAA‑CTTATATAAATTAAAAAAATATtatataaaaa > 2:2261449/1‑124 (MQ=255) tCAAAACATATATAACATACATTCATTATATA‑‑TAT‑‑‑‑ATATAT‑‑‑‑ATATATATATATATATA‑‑‑‑A‑T‑‑‑TCAATATATAAATTAAAATATTTTATTATAGAAAC‑AGTTTATAAAGTAAAAAAATATTAAATataata > 1:860718/1‑128 (MQ=255) tCAAAACATATATAACATACATTCATTATATA‑‑TAT‑‑‑‑ATATAT‑‑‑‑ATATATATATATATATA‑‑‑‑A‑T‑‑‑AAAATATTTAAATTAAAATATTTTATAATATCAAG‑ATTTAATAAAATAAAAAAATAGtatataatcta > 2:3006825/1‑123 (MQ=255) tCAAAACATATATAACATACATTCAT‑‑‑‑‑‑‑‑TAT‑‑‑‑ATATAT‑‑‑‑ATATATATATATATATATAT‑A‑TAAAGAAATATATAAATAAAAATATGTTATAATATCAAA‑CATATATAAATTAAAAAAATATTAAATataata > 1:556118/1‑128 (MQ=255) aaaCATATATAACATACATTCATTATA‑‑‑‑TAT‑‑‑‑ATATAT‑‑‑‑ATATATATATATATATA‑‑‑‑A‑T‑‑‑TAAATATGTAAATGAAAATATTGTATAATATCAAA‑CGTTTATAAAATAAAAAAATATTAAATATACTAATTAt > 1:591121/1‑128 (MQ=25) aaaCATATATAACATACATTCAT‑‑‑‑‑‑‑‑TAT‑‑‑‑ATATAT‑‑‑‑ATATATATATATATATATAT‑A‑TAAATAAATATGTAAATTAAAATATTTTATAATATAAAC‑AGTTTATAAAGTAAAAAAATATTAAataaaaaaatt > 2:873663/1‑120 (MQ=255) aCATATATAACATACATTCAT‑‑‑‑‑‑‑‑TATATAAATATAT‑‑‑‑ATATATATATATATATA‑‑‑‑A‑A‑‑‑ACAATATATAAAAAAAAATATCTTATAATATAAAA‑AGTATAAAAAATAAAAAAATAATAAATAAAATACATaata > 2:1877541/1‑125 (MQ=255) tatataACATACATTCAT‑‑‑‑‑‑‑‑TAT‑‑‑‑ATATAT‑‑‑‑ATATATATATATATATAT‑‑‑A‑TAAAGAAATATGTAAATAAAAATATGGTATAAAACCAAC‑CGTATATAAATAAAAAAAATATTAAATATACAACTTAttaaaa > 1:3886386/1‑124 (MQ=255) acataatgcat‑‑‑‑‑‑‑‑tAT‑‑‑‑ATATAT‑‑‑‑ATATATATATATATATA‑‑‑‑T‑A‑‑‑TATATATTAAAAAAAAAATATATTAAAATAACAAA‑AATTTATAAATTATAAAAATAAAAAATATAATACTTATTAaaatataaaatata > 1:4515018/9‑128 (MQ=2) acattcattatatat‑‑‑‑atatat‑‑‑‑atatatatatatatata‑‑‑‑A‑T‑‑‑GAAATATGTAAAAGAAAATATTTTATAATATAAAC‑ATTATATAAATTAAAAAAATAATAAATATACTACTTAATTACTAAAAAAATCt > 2:2080625/13‑128 (MQ=19) ttcattatatat‑‑‑‑atatat‑‑‑‑atatatatatatatata‑‑‑‑T‑T‑‑‑GCTATATGTAAAATAAAATATTTTATTATAGAAAA‑CTTTTATAAAGTAAAAAAATAGTATATATACTACTTATTTAAAAATAAAATCTAtt > 2:1012343/10‑128 (MQ=25) aattatatatat‑‑‑‑atatat‑‑‑‑atatatatatatatata‑‑‑‑A‑T‑‑‑GCAATATGTAAATGAAAATATGGTATAATAGCAAC‑CGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTAtt < 1:4339280/119‑1 (MQ=255) tttttatatat‑‑‑‑atatat‑‑‑‑atatatatatatatata‑‑‑‑A‑T‑‑‑GCAATATGTAAATTAAAATATTGTATAATATCAAC‑AGTTTATAAATTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTAttt < 2:124002/120‑1 (MQ=255) tcattatatat‑‑‑‑atatat‑‑‑‑atatatatatatatata‑‑‑‑A‑T‑‑‑GCAATATGTAAATGAAAATATGGTATAATAGCAAC‑CGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTAttt < 2:771911/120‑1 (MQ=255) attatatat‑‑‑‑atatat‑‑‑‑atatatatatatatata‑‑‑‑A‑T‑‑‑GCAATATGTAAATGAAAATATGGTATAATAGCAAC‑CGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTAttttt < 2:14380/122‑1 (MQ=255) ttatatat‑‑‑‑atatat‑‑‑‑atatatatatatatata‑‑‑‑A‑T‑‑‑GCTATATGTAAATGAATATATGGTATAATAGCAAC‑AGTTTATATAGTAAAAATATAGTATATATTCTACTTATTTACTAATAAAATCTATTttta > 2:1186551/6‑128 (MQ=255) ttatatat‑‑‑‑atatat‑‑‑‑atatatatatatatata‑‑‑‑A‑T‑‑‑GCAATATGTAAATGAAAATATGGTATAATAGCAAC‑CGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTATTttta < 1:1387493/123‑1 (MQ=255) tatatat‑‑‑‑atatat‑‑‑‑atatatatatatatata‑‑‑‑A‑T‑‑‑GCAATATGTAAATGAAAATATGTTATAATAGCAAC‑CTTTTATAAAGTAAAAAAATAGTAAATATAATACATATTAACTAAAAAAATCtattattat > 1:2831053/5‑128 (MQ=255) tatatat‑‑‑‑atatat‑‑‑‑atatatatatatatata‑‑‑‑A‑T‑‑‑GCAATATGTAAATGAAAATATGTTATAATAGAAAC‑ATTTTATAAAGTAAAAAAATATAATATATACTACTTATTTAATAATAAAATATATTtttat > 2:1581914/5‑128 (MQ=255) atat‑‑‑‑atatat‑‑‑‑atatatatatatatata‑‑‑‑A‑T‑‑‑GCAATATGTATATGAAAATATGGTATAATAGCAAC‑CGTTTATAAATTAAAAAAATAGTAAATATACTAATTATTTACTAATAAAATATATTtatatata > 2:3074115/2‑128 (MQ=255) at‑‑‑‑atatat‑‑‑‑atatatatatatatata‑‑‑‑A‑T‑‑‑GCAATATGTAAATGAAAATATGGTATAATAGCAAC‑CGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTATTTTTATTTaaa < 2:2804352/128‑1 (MQ=255) atatat‑‑‑‑atatatatatatatata‑‑‑‑A‑A‑‑‑TATATATGTAAATGAAAATATTTTATAATAGCAAC‑AGTTTATAAACAAAAAATATATTAAATATAATAATTATTAAATAATAAAATATATTTTTATTTaaaaa > 1:3538536/1‑128 (MQ=255) tatat‑‑‑‑atatatatatatatata‑‑‑‑A‑T‑‑‑TCAATATGTAAATTAAAATATTTTATAATATAAAA‑AGTTTATAAATAAAAAAAATAATAAATAAAATAATTATAAACTAAAAAAATCTATTTTTATATaaaaaa > 2:2153284/1‑128 (MQ=255) tat‑‑‑‑atatatatatatatata‑‑‑‑A‑T‑‑‑GCAATATGTAAATGAAAATATGGTATAATAGCAAC‑CGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTATTTTTATTTAAAAAAGt < 1:2105184/128‑1 (MQ=255) tat‑‑‑‑atatatatatatatata‑‑‑‑A‑T‑‑‑GCAATATGTAAATGAAAATATGGTATAATAGCAAC‑CGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTATTTTTATTTAAAAAAGt < 2:293790/128‑1 (MQ=255) at‑‑‑‑atatatatatatatata‑‑‑‑A‑T‑‑‑TAAATATTTAAAATAAAATATTTTATAATATCAAC‑ATTTTAAAAAGTAAAAAAATATTAAATAAAAAAATTATATAATAATAAAATCTATTTTTATTTAAAAAATTa > 1:4028700/1‑128 (MQ=255) | TTGTAATAACTAATCCAAATGAACTTAAAATTGTAAT‑TAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑‑‑‑‑TAT‑‑‑‑ATATAT‑‑‑‑ATATATATATATATATA‑‑‑‑A‑T‑‑‑GCAATATGTAAATGAAAATATGGTATAATAGCAAC‑CGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTATTTTTATTTAAAAAAGTA > CP016816/311029‑311283 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |