BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP016816	= 311148	176 (0.250)	194 (0.220) +TATA	67/190	22.8	46.0%	intergenic (‑71/‑243)	JCVSYN2_01300/JCVSYN2_01305	hypothetical protein/30S ribosomal protein S21
*	?	CP016816	311149 =	248 (0.270)	194 (0.220) +TATA	67/190	22.8	46.0%	intergenic (‑72/‑242)	JCVSYN2_01300/JCVSYN2_01305	hypothetical protein/30S ribosomal protein S21
Rejected: Coverage evenness skew score above cutoff.

Only 100 of 458 total aligned reads displayed.

GTACCAGTTGTAATAACTAATCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑TATATATATATATATATATATATATA‑‑‑A‑T‑‑‑GCA‑ATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTATTTTTATTTAA  >  CP016816/311022‑311276

gTACCAGTTGTAATAACTAATCCAAATGAATTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATAcattcat‑‑‑‑t                                                                                                                                         >  1:1683473/1‑128 (MQ=255)

 tACCAGTTGTAATAACTAATCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑ta                                                                                                                                        >  1:418788/1‑128 (MQ=255)

  aCCAGTTGTAATAACTAATCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACAAACATTCAT‑‑‑‑tat                                                                                                                                       >  2:1946776/1‑128 (MQ=255)

    cAGTTGTAATAACTAATCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑tatat                                                                                                                                     >  1:542575/1‑128 (MQ=255)

      gTTGTAATAACTAATCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑tatatat                                                                                                                                   <  2:779332/128‑1 (MQ=255)

       ttGTAATAACTAATCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACTTTCAT‑‑‑‑tatatata                                                                                                                                  >  1:1227914/1‑128 (MQ=255)

         gTAATAACTAATCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑tatatatata                                                                                                                                >  1:1542338/1‑128 (MQ=255)

         gTAATAACTAATCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑tatatatata                                                                                                                                <  2:1583980/128‑1 (MQ=255)

           aataaCTAATCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACACCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑tatatatatata                                                                                                                              <  2:277030/128‑1 (MQ=255)

            ataaCTAATCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑tatatatatatat                                                                                                                             >  1:1497219/1‑128 (MQ=255)

              aaatAATACTAATGATCTTTAAATTGTAATTAACTTTTTAATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑tatatatatatatat                                                                                                                           <  1:1770387/125‑1 (MQ=255)

              aaCTAATACAAATTAACATATAATTGTAATTAAATTTTTAATTTTACACACCCCTAATTAAAAAATAAAATACTTTTTAAATAATATACAAAACATATATAACATACATTCAT‑‑‑‑tatatatatatatat                                                                                                                           <  2:569992/128‑1 (MQ=255)

               aatAATACAAATGTAATTAAAATTGTAATTAAATTTTTAATTTTACAAACACATTATTAAAAAATAAAATAATTTTTAAATATTATTCAAAAAATATATAACATACATTCAT‑‑‑‑tttatatatatatata                                                                                                                          <  1:126537/126‑1 (MQ=255)

               aCTAATCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑tatatatatatatata                                                                                                                          >  1:1631521/1‑128 (MQ=255)

               aCTAATCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑tatatatataaatata                                                                                                                          >  1:6674/1‑128 (MQ=255)

                cTAATCCAAATGAACTTAAAATTTTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑tatatatatatatatat                                                                                                                         <  2:473618/128‑1 (MQ=255)

                cTAATAAAAATGAAATTTAAATTGTAATTAAATTTTTAATTTTACACACCCATTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑tatatatatatatatat                                                                                                                         <  1:1980041/128‑1 (MQ=255)

                 tAATCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑tatatatatatatatata                                                                                                                        <  2:707231/128‑1 (MQ=255)

                   atacAAATGAAATTAAAATTGTAATTAAATTTTTCATTTTACACAACCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑tatatatatatatatatata                                                                                                                      <  1:811933/125‑1 (MQ=255)

                   aTCCAAATGAAATTAAAATTGTAAATAAATTTATCATTATACACACCCAAAATTAAAAAATAAAATAATTTTTACATACCATTCAAAACATATATAACATACAATCAT‑‑‑‑tatatatatatatatatata                                                                                                                      <  2:1294741/128‑1 (MQ=255)

                    tCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑tatatatatatatatatataa                                                                                                                     >  1:1969880/1‑127 (MQ=255)

                     ccAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑tatatatatatatatatataat                                                                                                                    <  1:1431348/128‑3 (MQ=255)

                     caaaaTGAACTAAAAAATTTAATTAACTTTTTAATTTTACACACCCCTTATTAAAAAATAAAATACTTTTTACATACTATTCAAAACATATATAACATACATTCAT‑‑‑‑tatatatatatatatatatata                                                                                                                    <  2:1784950/126‑1 (MQ=255)

                        aaTGAACTTAAAATTGTAATTAACTTTTTCATTTTAAACAAACATTATTAAAAAATAAAATACTTGTTACATACTATTCAAAACATATATAACATACATTCAT‑‑‑‑tatatatatatatatatataatgca                                                                                                                 <  2:1841007/128‑6 (MQ=255)

                            taCTTAAAATTGTAATTAACTTTTTCATTGTACACACACCTTATTAAAATATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑tatatatatatatatataatgaatgtatg                                                                                                             <  1:739320/127‑12 (MQ=255)

                             aCTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑TATATAAATATATATATATATATATa‑‑‑aatc                                                                                                         >  1:779983/1‑125 (MQ=255)

                              cTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATAATTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑tatatatatatatatatataatgcaatatgt                                                                                                           <  2:296110/128‑12 (MQ=255)

                               ttAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑tatatatatatatatatataaacaaatatata                                                                                                          >  2:1010477/1‑116 (MQ=255)

                                  aaaTTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑TATATATATATATATATATATATATA‑‑‑A‑T‑‑‑TCA‑atat                                                                                               >  2:1720538/1‑128 (MQ=255)

                                  aaaTTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑TATATATATATATATATATATATATA‑‑‑A‑T‑‑‑GCA‑atat                                                                                               >  2:1246270/1‑128 (MQ=255)

                                   aaTTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑TATATATATATATATATATATATATa‑‑‑aaaacaaaaa                                                                                                   >  2:186956/1‑119 (MQ=255)

                                    aTTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑tatatatatatatatatatatatatatataaatcaat                                                                                                     >  2:1963950/1‑117 (MQ=255)

                                    aTTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑tatatatatatata                                                                                                                            <  1:1614801/105‑1 (MQ=255)

                                           ttAAATTTTTAATTTTAAAAATAATTTATTAAAAAATAAAATAATTGTTACATAATATTAAAAAAATATATAAAATAAATTAAT‑‑‑‑TATATATATATATATATATATATATA‑‑‑A‑T‑‑‑GCA‑ATATGTAAATGaa                                                                                      <  1:1409766/128‑1 (MQ=25)

                                             aaatttttCATTTTAAACACACCTTATTAAAAAATAAAATAATTGTTAAATAATATTCAAAAAATATATAAAATAAATTCAT‑‑‑‑TATATATATATATATATATATATATA‑‑‑A‑T‑‑‑GCA‑ATATGTAAATGaaaa                                                                                    <  1:1178396/125‑1 (MQ=37)

                                             aaCTTTTTAATATTACACACCCAATATTAAAAAATAAAATACTTGTTACATACTCTTCAAAACATATATAACATACAATCATTA‑‑TATATATATATATATATATATATATA‑‑‑A‑T‑‑‑GCA‑ATATGTAAATGaa                                                                                      <  1:826827/128‑1 (MQ=255)

                                              aatttatCATTTTACAAAAAAATTATTAAAAAATATAATACTTTTTACATAATATTCAAAACATATATAACATACATTCAT‑‑‑‑‑‑‑‑‑‑TATATATATATATATATATA‑‑‑A‑T‑‑‑GCA‑ATATGTAAATGAAAATATGGta                                                                             <  2:840556/126‑1 (MQ=255)

                                                tttttAATATTAAAAACACCTTATTAAAAAATAAAATAATTGTTAAATAATATTCAAAAAATATATAATATACATTAATTA‑‑TATATATATATATATATATATATATA‑‑‑A‑T‑‑‑GCA‑ATATGTAAATGAAAat                                                                                   <  2:808298/128‑1 (MQ=255)

                                                   ttCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑‑‑‑‑‑‑‑‑TATATATATATATATATA‑‑‑A‑T‑‑‑GCA‑ATATGTAAATGAAAATATGGTATAATAGc                                                                      <  2:741988/128‑1 (MQ=255)

                                                     cATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑‑‑‑‑‑‑TATATATATATATATATATA‑‑‑A‑T‑‑‑GCA‑ATATGTAAATGAAAATATGGTATAATAGc                                                                      <  2:874883/128‑1 (MQ=255)

                                                      aTTTTACACACAACTTATTAAAAAATAAAATACTTGTTAAATACGATTCAAAACATATATAACATACATTAAT‑‑‑‑‑‑TATATATATATATATATATATATA‑‑‑A‑T‑‑‑GCA‑ATATGTAAATGAAAATATGGTataat                                                                         <  1:1953221/128‑1 (MQ=255)

                                                      aTTTTAAACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑‑‑‑‑TATATATATATATATATATATA‑‑‑A‑T‑‑‑GCA‑ATATGTAAATGAAAATATGGTATAATAg                                                                       <  2:1346522/128‑1 (MQ=255)

                                                        tttaaacacaatttattaAAAAATAAAATACTTGTTACATAAGATTAAAAACATATATAAAATACTTTCAT‑‑‑‑TATATATATATATATATATATATATA‑‑‑A‑T‑‑‑GCA‑ATATGTAAATGAAAATATGGTataat                                                                         <  2:1408214/116‑1 (MQ=38)

                                                        tttACAAACCCATTATTAAAAAATAAAATAATTGTTATATAATATTAAAAACATATATAAAATACATTCAA‑‑‑‑TATATATATATATATATATATATATA‑‑‑A‑T‑‑‑GCA‑ATATGTAAATGAAAATATGGTataat                                                                         <  2:1692123/128‑1 (MQ=255)

                                                          tatatacCACTTATTATAAAATAAAATAATTTTTATATAATATTTTTAACATATATATAATAAATTAATTA‑‑TATATATATATATATATATATATATA‑‑‑A‑T‑‑‑GCA‑ATATGTAAATGAAAATATGGTataat                                                                         <  1:588871/123‑1 (MQ=255)

                                                          tACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCATTATATATATATATATATATATATATATATA‑‑‑A‑T‑‑‑TAA‑ATATATAAATGAAAATATGAtata                                                                           >  2:1168622/1‑128 (MQ=37)

                                                           acacacCCCTTATTAAAAAATAAAATACTTGTTACAAACGATTCAAAACATATATAACATACATTCAT‑‑‑‑TATATATATATATATATATATATATAT‑‑ATT‑‑‑CCA‑ATATGTAAATGAAAATATTGTattata                                                                        >  1:489249/1‑128 (MQ=255)

                                                            cacacCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCATTATATATATATATATATATATATATATATA‑‑‑A‑T‑‑‑GAA‑ATATGTAAATGAATATATGGTataat                                                                         >  1:1206292/1‑128 (MQ=38)

                                                            cacacCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑TATATATATATATATATATAT‑‑‑‑‑‑‑‑‑‑T‑‑‑GCA‑ATATTTAAATTAAAATATGTTATAATAGAAACAGtt                                                               >  2:1526954/1‑128 (MQ=255)

                                                              cacCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCATTA‑‑TATATATATATATATATATATATATA‑‑‑A‑T‑‑‑GCA‑ATATGTAAATGAAAATATGATATAATAgac                                                                     >  1:1472019/1‑126 (MQ=255)

                                                               acCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑‑‑‑‑‑‑TATATATATATATATATATA‑‑‑A‑T‑‑‑GCA‑ATATGTAAATGAAAATATGGTATAATAGCAACCGTTtat                                                            <  1:18595/128‑1 (MQ=255)

                                                                    ttattaAAAAATAAAATACTTGTTAAATAAGATTCAAAACATATATAACATACATTCAT‑‑‑‑‑‑‑‑‑‑TATATATATATATATATATA‑‑‑A‑T‑‑‑GCA‑ATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGt                                                       <  2:1626059/128‑1 (MQ=255)

                                                                     tattaAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑TATATATATATATATATATATATATA‑‑‑A‑T‑‑‑TCA‑ATATGTAAATTAAAATATTGTATAATATAAACCTTTtat                                                            >  2:327945/1‑128 (MQ=39)

                                                                       ttaAAAAATAAAATACTTTTTACATAAGATTAAAAAAATATATAAGATAAATTAATTATATATATATATATATATATATATATATA‑‑‑A‑T‑‑‑GCA‑ATATGTAAATGAAAATATGGTATAATAGCAACCGttt                                                              <  1:1003182/128‑1 (MQ=25)

                                                                        taaaatataaaataCTTGTTACATAAGATTCAAAACATATATAACATAAATTCAT‑‑‑‑‑‑TATATATATATATATATATATATA‑‑‑A‑T‑‑‑GCA‑ATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGt                                                       <  2:198647/128‑1 (MQ=255)

                                                                          aaaaaTAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑‑‑‑‑‑‑TATATATATATATATATATA‑‑‑A‑T‑‑‑GCA‑ATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTaaaaaa                                                 >  2:1882447/1‑128 (MQ=255)

                                                                              atataataCTTTTTAAATACTATTCAAAAAATATATAACATAAATTATTTA‑‑TATATATATATATATATATATATATA‑‑‑A‑T‑‑‑GCA‑ATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTaa                                                     <  2:1818890/128‑1 (MQ=255)

                                                                              ataaaataCTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑TATATATATATATATATATATATATAT‑‑A‑TTAATAA‑ATATATAAATTAAAATATTTTATAATAGAAACCTTTTATaaaat                                                       >  1:864743/1‑126 (MQ=255)

                                                                               taaaataCTTGTTACATACGATTCAAAACATATATAACATACATTCATTA‑‑TATATATATATATATATATATATATA‑‑‑A‑T‑‑‑TCA‑ATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTaaa                                                    >  2:379152/1‑128 (MQ=255)

                                                                               taaaataATTGTTAAATAAGATTTAAAACATATATAAAATACATT‑‑T‑‑‑‑T‑‑‑‑‑T‑TATATATATATATATATA‑‑‑A‑T‑‑‑GCA‑ATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTaa                                          <  1:1139081/128‑1 (MQ=255)

                                                                                aaaataCTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑‑‑‑‑‑‑TATATATATATATATATATA‑‑‑A‑T‑‑‑GCA‑ATATGTATATGAATATATTATATAATAGCAACCTATTTAAAAGTAAAAAAATAgaa                                           >  2:534127/1‑126 (MQ=255)

                                                                                aaaataCTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑‑‑‑‑‑‑TATATATATATATATATATA‑‑‑A‑T‑‑‑GCA‑ATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATATTa                                           >  1:1378668/1‑128 (MQ=255)

                                                                                 aaataCTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑‑‑‑‑‑‑‑‑TATATATATATATATATA‑‑‑A‑T‑‑‑GCA‑ATATGTAAATGAAAATATGGTATAATATCAACCGTTTATAAAGTAAAAAAATAGAAAat                                        >  1:1055589/1‑128 (MQ=255)

                                                                                 aaataCTTGTTAAATAAGATTAAAAACATATATAACATACATTAATTA‑‑TATATATATATATATATATATATATA‑‑‑A‑T‑‑‑GCA‑ATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTaaaaa                                                  <  1:192290/128‑1 (MQ=255)

                                                                                   atatTTGTTACATACTATTCAAAAAATATATAACATAAATTAATTA‑‑TATATATATATATATATATATATATA‑‑‑A‑T‑‑‑GCA‑ATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTaaaaaaa                                                <  1:442189/128‑1 (MQ=255)

                                                                                    taCTTGTTATATACTATTCAAAACATATATATCATACATTCATTATATATATATATATATATATATATATATA‑‑‑A‑T‑‑‑GCA‑ATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTaaaaaa                                                 <  2:6674/128‑1 (MQ=255)

                                                                                    taCTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑‑‑‑‑‑‑TATATATATATATATATATA‑‑‑A‑T‑‑‑GCA‑ATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAata                                       <  1:61803/128‑1 (MQ=255)

                                                                                    taCTTGTTACATACGATTCAAAAAATATATAACATACATTCAT‑‑‑‑‑‑‑‑TATATATATATATATATATATA‑‑‑A‑T‑‑‑GCA‑ATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTaaa                                         <  1:1095298/128‑1 (MQ=255)

                                                                                     aCTTGTTACATACGATTCAAAACATATATAACATAAGTTCAT‑‑‑‑‑‑‑‑‑‑TATATATATATATATATATA‑‑‑A‑T‑‑‑GCA‑ATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAatat                                      <  2:1497163/128‑1 (MQ=255)

                                                                                       ttGTTACATACTATTCAAAACATATATAACATACATTCAT‑‑‑‑TATATATATATATATATATA‑AT‑TA‑‑‑‑‑‑‑‑‑‑‑A‑ATATGTAAATGAAAAAATGGTATAATAGCAACAGTTTATAAAGTAAAAAAAAATTAAAtataa                                    >  1:116708/1‑127 (MQ=255)

                                                                                       ttGTTACATACGATTCAAAACATATATAACATACATTCATTA‑‑TATATATATATATATATATATATATA‑‑‑A‑T‑‑‑GCA‑ATATGTAAATGAAAATATTGTATAATATAAACATTTTATAAAGTAAAAAAATAGt                                            >  2:1081508/1‑128 (MQ=255)

                                                                                        tGTTACATACGATTCAAACCATATATAACATACATTCATTA‑‑TATATATATATATATATATATATATA‑‑‑A‑T‑‑‑GAA‑ATATTAAAATGAAAATATTTTATAATAGCAAAATTTTATAAAGAAAAAAAATAGTa                                           >  1:1818890/1‑128 (MQ=25)

                                                                                        tGTTACATACGATTCAAAACATATATAACATACATTCATTA‑‑TATATATATATATATATATATATATA‑‑‑A‑A‑‑‑GAA‑ATATTTAAATAAAAATATTTTATAATAGAAACATATTATAAATAAAAAAAATATTa                                           >  2:138104/1‑128 (MQ=255)

                                                                                        tGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑‑‑TATATATATATATATATATATATA‑‑‑A‑T‑‑‑GCA‑ATATTTAAATGAAAATATGGTATAATAGAAACCGTTTATAAAGTAAAAAAATATTAAata                                       >  2:167307/1‑128 (MQ=255)

                                                                                         gTTATATAATATTCAAAACATATATAAGATAAATAGATTA‑‑TATATATATATATATATATATATATA‑‑‑A‑T‑‑‑GCA‑ATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTaa                                          <  1:378681/128‑1 (MQ=255)

                                                                                           tACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑‑‑‑‑‑‑TATATATATATATATATATA‑‑‑A‑T‑‑‑GCA‑ATATTTAAATGAAAATATGGTATAATATAAACAGTTTATAAAGTAAAAAAATAGTAAATAtactaat                                >  1:711836/1‑126 (MQ=255)

                                                                                           tACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑‑‑‑‑‑‑TATATATATATATATATATA‑‑‑A‑T‑‑‑GCA‑ATATGTAAATGAAAATATTGTATAATAGAAACAGTTTATAAAGAAAAAAAATATTAAATATactact                                >  2:960758/1‑128 (MQ=255)

                                                                                            aCATACGATTCAAAACATATATAACATACATTCATTA‑‑TATATATATATATATATATATATATA‑‑‑A‑A‑‑‑GAA‑ATATTTAAATGAAAATATGTTATAATATCAACCTTTTATAAAGTAAAAAAATATTAAata                                       >  1:1728128/1‑128 (MQ=255)

                                                                                                aCGATTCAAAACATATATAACATACATTCAT‑‑‑‑TATATATATATATATATATATATATATATATT‑‑‑GCA‑ATATATAAATGAATATATGTTATAATAGCAACCTTTTATAAAATAAAAAAATAGAAAAtata                                     >  1:1585857/1‑128 (MQ=255)

                                                                                                 cGATTCAAAACATATATAACATACATTCAT‑‑‑‑‑‑‑‑‑‑TATATATATATATATATATA‑‑‑A‑T‑‑‑GCA‑ATATGTAAATGAAAATATGTTATAATAGCAACATTTTATAAAGTAAAAAAATATTAAATATACTACTTATTTa                          >  2:1312483/1‑128 (MQ=255)

                                                                                                 cGATTCAAAACATATATAACATACATTCAT‑‑‑‑‑‑‑‑‑‑TATATATATATATATATATA‑‑‑A‑T‑‑‑GAA‑ATATGTAAATGAAAATATGGTATAATAGCAACAGTTTATAAATTAAAAAAATATTAAATATAATAATTATTTa                          >  1:467929/1‑128 (MQ=255)

                                                                                                     tCAAAACATATATAACATACATTCAT‑‑‑‑‑‑‑‑‑‑TATATATATATATATATATA‑‑‑A‑T‑‑‑GCA‑ATATGTAAATGAAAATATGGTATAATATCAACAGTTTATAAAGTAAAAAAATAGTAAATATACAACTTATTTACtaa                      >  1:573459/1‑128 (MQ=255)

                                                                                                       aaaaCATATATAACATACATTCATTATATATATATATATATATATATATATATA‑‑‑A‑T‑‑‑AAA‑ATATATAAATTAAAATATTTTATAATATCAAAATTTTATAAAGTAAAAAAATATTAAATAtactaaata                              >  2:545370/1‑124 (MQ=255)

                                                                                                         aaCATATATAACATACATTCAT‑‑‑‑TATATATATATATATATATATATATAT‑‑A‑A‑‑‑AAATATATATAAATAAAAATATATTATAATATAAAAAAATTATAAAAAATAAAAATAAAAAATataataaatatata                          >  2:589952/1‑120 (MQ=255)

                                                                                                          aCATATATAAAATACATTCAT‑‑‑‑TATATATATATATATATATATATATA‑‑‑A‑T‑‑‑GCA‑ATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACta                       <  1:1323369/128‑1 (MQ=255)

                                                                                                             tatataACATACATTCATTA‑‑TATATATATATATATATATATATATA‑‑‑A‑T‑‑‑GCA‑ATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACtaa                      >  2:1913999/1‑128 (MQ=255)

                                                                                                             tatataACATACATTCAT‑‑‑‑TATATATATATATATATATATATATA‑‑‑A‑T‑‑‑GCA‑ATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACtaata                    <  2:120954/128‑1 (MQ=255)

                                                                                                              atataACATACATTCAT‑‑‑‑TATATATATATATATATATATATATAT‑‑A‑TAAATCA‑ATATTTAAATTAAAATATTTTATAATATCAAACTTTTATAAAGTAAAAAAATAATAAATATACTAATTATTTAAta                       >  2:1184865/1‑128 (MQ=255)

                                                                                                               tataACATACATTCAT‑‑‑‑‑‑‑‑TATATATATATATATATATATA‑‑‑A‑T‑‑‑GCA‑ATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGAAAAAAAATAGTAAATATACTACTTATATACTAATAAAATCt              >  1:1846854/1‑128 (MQ=255)

                                                                                                                 taACATACATTCAT‑‑‑‑TATATATATATATATATATATA‑‑‑A‑‑‑A‑T‑‑‑‑CT‑ATATTTAAAAAAAAATATTATATAATAGCAACATTATATAAAAAAAAAAAATATTAAATAAAAAAATTATATAATTATAAAAtattt            >  1:937774/1‑124 (MQ=255)

                                                                                                                  aaCATACATTCAT‑‑‑‑TATATATATATATATATATATATATA‑‑‑A‑T‑‑‑GCA‑ATATGTAAATGAAAATATTTTATAATAGCAACATTTTATAAATTAAAAAAATATTAAATATACTAATTATTTACTAATAAAAta               >  1:130375/1‑127 (MQ=38)

                                                                                                                    catacatTCATTA‑‑TATATATATATATATATATATATATA‑‑‑A‑T‑‑‑GCA‑ATATGTAAATGAAAATATGTTATAATAGCAACAGTTTATAAATTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATc               >  1:852381/1‑128 (MQ=255)

                                                                                                                     atatatTAAT‑‑‑‑TATATATATATATATATATATATATA‑‑‑A‑T‑‑‑GCA‑ATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTAt            <  1:1079228/128‑1 (MQ=255)

                                                                                                                      tacatTCATTA‑‑TATATATATATATATATATATATATA‑‑‑A‑T‑‑‑TCA‑ATAT‑TTAATTAAAATATGGTATAATATCAACATTTTATAAAGTAAAAAAATATTAAATATACAACTTATATAATAATAAAatatat            >  1:1351620/1‑128 (MQ=255)

                                                                                                                            ttcattatatatatatatatatatatatatata‑‑‑A‑T‑‑‑GCA‑ATATTTAAATGAAAATATTGTATAATAGCAACCTTTTATAAAGTAAAAAAATAGTAAATATAATACTTATTAACTAATAAAATATAtttt         >  1:30930/8‑128 (MQ=38)

                                                                                                                            ttcattatatatatatatatatatatatatata‑‑‑A‑T‑‑‑GCA‑ATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTAtttt         <  2:1542338/121‑1 (MQ=255)

                                                                                                                            cat‑‑‑‑tATATATATAAATATATATATATAAA‑‑‑A‑T‑‑‑GGA‑ATATGTAAATGAAAATATTGTATAATATCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTATTtttatt     <  2:39897/128‑1 (MQ=255)

                                                                                                                             attatatatatatatatatatatatatatata‑‑‑A‑T‑‑‑ACA‑ATATTTAAATAAAAATATGGTATAATAGCAACAGTTTATAAATTAAAAAAATATTATATATAATACATATTTAATAATAAAATATAttttt        >  1:253766/7‑128 (MQ=255)

                                                                                                                               tatatatatatatatatatatatatatata‑‑‑A‑T‑‑‑GCA‑ATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTATTtttat      <  2:1130/124‑1 (MQ=255)

                                                                                                                                 tatatatatatatatatatatatatata‑‑‑A‑T‑‑‑GCA‑ATATGTAAATTAAAATATGGTATAATATAAACATTTTATATAGTAAAAAAATATTAAATATACTACTTATATAATAATAAAATCTATTtttatat    >  2:1480173/3‑126 (MQ=255)

GTACCAGTTGTAATAACTAATCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑TATATATATATATATATATATATATA‑‑‑A‑T‑‑‑GCA‑ATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTATTTTTATTTAA  >  CP016816/311022‑311276

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 14 ≤` `ATCG/ATCG` `< 15 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 36 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.