New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP016816 = 165267923 (0.500)540 (0.290) 80/248 27.5 37.2% intergenic (+231/‑311) JCVSYN2_00665/JCVSYN2_00670 tRNA N6‑adenosine(37)‑N6‑threonylcarbamoyltransferase complex dimerization subunit TsaB/tRNA‑Ser
?CP016816 165271 = 905 (0.490)intergenic (+235/‑307) JCVSYN2_00665/JCVSYN2_00670 tRNA N6‑adenosine(37)‑N6‑threonylcarbamoyltransferase complex dimerization subunit TsaB/tRNA‑Ser
Rejected: Coverage evenness skew score above cutoff.

Only 100 of 1390 total aligned reads displayed.

TAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTAAAAGAATTAA‑TTTGAACTTGTAAAAAATAGCTTTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGT‑CTAAGTATCTAAAAAAATAGAAAGGAAAAAATATTGTTAAAAGTAATACTAAAATTATTTAATGTTAATTAAAACTTAAATAAAACATAAAA  >  CP016816/165140‑165394
                                                                                                                                |                                                                                                                                
      ttttaatttttattaattattaatTAAATAAAAATATTTTATTTTTTTATATTTTTTTTTTTTTAAAATTTTTAAAAAATTAA‑TTTTAAATTTTTAAAAAT‑TTTTTTTTTTTTTTTTTTTTTATAATg                                                                                                                           <  2:580155/118‑1 (MQ=255)
       tCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAA‑TTTGAACTTGTAAAAAATAGCTTTTTTTTTTTTTTTTTatatttta                                                                                                                           >  2:1419152/1‑124 (MQ=255)
        cGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAA‑TTTGAACTTGTAAAAAATAGCTTTTTTTTTTTTTTTTtataatgtaa                                                                                                                          >  2:3958527/1‑122 (MQ=255)
          cACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAA‑TTTGAACTTGTAAAAAATAGCttttttttttttttttttaaatgtaaat                                                                                                                        >  2:1765067/1‑118 (MQ=255)
             ttGTATGAATTAGCAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAA‑TTTGAACTTGTAAAAAATAGCTTTTTTTTTTTTTTTTtataatttaaataaa                                                                                                                     >  1:454429/1‑117 (MQ=255)
                tATTAATTATTTAGAAAATTAAAATTTTATATTTTTTTATTTTTTTTTTATATGTAAATTTTTAAAAAATTAA‑TTTTAACTTGTAAAAAATA‑‑‑TCTTTTTTTTTTTTTTTTATAATGGAAATATAAAtt                                                                                                               <  2:874177/128‑1 (MQ=255)
                   gAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAA‑TTTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTATTTTATAATAGAATTATAAAtttt                                                                                                             >  2:3567009/1‑128 (MQ=255)
                   gAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAA‑TTTGAACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTATAATTGAAATAAAAATTTTa                                                                                                            >  1:737509/1‑128 (MQ=255)
                    aaTTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAA‑TTTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTATATTTTAAATATAAATTTTa                                                                                                            >  1:3943074/1‑128 (MQ=255)
                     attttttataaaataaaaataTTATTTTTTTATTTTTTTTTTTTTTATTTAAATTTTTAAAAAATTAA‑TTTTTAATTTTAAAAAAT‑‑TTTTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAg                                                                                                           <  2:666043/119‑1 (MQ=255)
                      ttAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAA‑TTTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTATAATGTAAATATAAATTTAAgt                                                                                                          >  1:3229730/1‑127 (MQ=255)
                       ttgttataaaataaaaattTTTTTTTTTTTTATTTTTTTTGTATATTCAAATTTTTAAAAAATTAA‑ATTGAAATTGTTAAAAATA‑‑TCTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGt                                                                                                         <  2:712878/121‑1 (MQ=255)
                       tatttataaaataaaaattTTAAGTTTTTTTATTTTTTTTGTTATTGCAAATTTTTAAAAAATTAA‑TTTGAACTTTTAAAAAATA‑‑TCGTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGt                                                                                                         <  1:2677324/121‑1 (MQ=255)
                       tatttactaaataaaaataTTTTTTTTTTATTTTATTTTTTTTTATTTAAATTTTTTAAAAATTAA‑TTTTTAATTTTAAAAAAT‑‑TTCTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGt                                                                                                         <  2:1266696/117‑1 (MQ=255)
                       tAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAA‑TTTGAACTTGTAAAAAATAGCTTTTTTTTTTTTTTTTTT‑‑TAATTAAAATAAAAATTTTAgta                                                                                                         >  1:3155713/1‑126 (MQ=255)
                        aGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAA‑TTTGAACTTGTAAAAAATAGCTTTTTTTTTTTTTTTTTTTA‑AATGTAAATATAAATTTTattt                                                                                                         >  1:3820550/1‑125 (MQ=255)
                         tttattaaataaaaaaaTTATTTTTTTTTATATTTTTTTTTTTATCAAATTTTTTAAAAATTAA‑TTTTTAATTTTAAAAAAAA‑‑TGTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTAt                                                                                                       <  1:1821486/119‑1 (MQ=255)
                          taataaAATAAAAATATTTTTTTTTTATTTTTTTTTTGTAATTTTAAATTTTTAAAAAATTAA‑TTTTAAATTTTAAAAAATAG‑‑TTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTAtt                                                                                                      <  1:3576810/128‑1 (MQ=255)
                             gAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAA‑TTTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTATTTATAATGGAAATATAAATTTTAGGTATTttg                                                                                                   >  2:3203490/1‑128 (MQ=255)
                               aactaaaactaTTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAA‑TTTGAACTTGTAAAAAATAGCTTTTTTTTTTTTTTTTTTTAAAATTAAAATATAAATTTTATTTAttttt                                                                                                   >  1:2924893/1‑127 (MQ=255)
                                actaaaactaTTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAA‑TTTGAACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTATAATTTAAATAAAAAtttttttttttttttt                                                                                                 >  2:1038576/1‑116 (MQ=255)
                                actaaaactaTTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAA‑TTTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTATAATGTAAATTAAAATTTTattattttttttg                                                                                                >  1:1995204/1‑116 (MQ=255)
                                actaaaactaTTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAA‑TTTGAACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTATAATTGAAATATAAATTTtatttattatttttt                                                                                               >  1:674538/1‑121 (MQ=255)
                                 ctaaaactaTTATCTTTTTATATATTTTTTGTATATTCAAATTTTTTAAAAATTAA‑TTTTAACTTGTAAAAAATA‑‑TCTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTtgttgt                                                                                               <  1:3419670/128‑1 (MQ=255)
                                 ctaaaactaTTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAA‑TTTGAACTTGTAAAAAATAGC‑‑‑‑TTTTTTTTTTTTTTTATAATTTAAATATAAATTTTATTTATttttttttat                                                                                             >  1:37010/1‑124 (MQ=255)
                                 ataaaaattTTATATTTTTTTATTTTTTTTTTATATTAAAATTTTTAAAAAATTAA‑TTTTTAATTTTAAAAAATATCTTTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTttgtt                                                                                                 <  2:1854155/127‑1 (MQ=255)
                                    aaattaTTATATTTTTAGTTATTTTTTTTTAATTGAAATTTTTAAAAAATTAA‑ATTGAAATTTTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGT‑CTa                                                                                           <  1:1206521/128‑1 (MQ=255)
                                     aaatattatTTTTTTATATATTTTTTTTTTAATTAAATTTTTAAATAATTAATTTTTAATTTTTAAAAAATA‑‑TCTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGT‑CTa                                                                                           <  1:1514400/125‑1 (MQ=255)
                                      aatattatTTTTTTATTTATTTTTTTTATATTAAAATTTTTAAAAAATTAA‑TTTTAAATTTTAAAAAATA‑‑TGTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGT‑CTAAg                                                                                         <  1:812554/126‑1 (MQ=255)
                                       ctaTTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAA‑TTTGAACTTGTAAAAAATAGCTTTTTTTTTTTTTTTTTTTAAATTGTAAATATAAATTTTTTGTTTTTTTTTTT‑ATaa                                                                                          >  2:191171/1‑128 (MQ=255)
                                        ttttatCTTTTTATATATTTTTTGTATATTAAAATTTTTAAAAAATTAA‑TTTTAAATTTTAAAAAATA‑‑TCTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGT‑CTAAGTa                                                                                       <  1:3636885/126‑1 (MQ=255)
                                        tattatCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAA‑TTTGAACTTGTAAAAAATAGCTTTTTTTTTTTTTTTTTTTA‑AATGAAAATAAATTTTTTATTTATttttttttaaaatt                                                                                         >  2:2130982/1‑120 (MQ=255)
                                        tattatCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAA‑TTTGAACTTGTAAAAAATA‑‑‑TCTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGT‑CTAAGTAt                                                                                      <  1:3011072/128‑1 (MQ=255)
                                          ttatCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAA‑TTTTAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTATATTTAAAATATAAATTTTATTTATttttttttaaatttata                                                                                      >  1:1394013/1‑117 (MQ=255)
                                           tatCTTTTTTTTTATTTTTTTTATATTATAATTTTTAAAAAATTAA‑TTTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGT‑CTAAGTATCt                                                                                    <  1:1145793/128‑1 (MQ=255)
                                              cTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAA‑TTTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTAAAATTTAAATATAAATTTTAGTTATTTTTTTTT‑ATaatttaataaa                                                                                 >  1:2101125/1‑119 (MQ=255)
                                               tttttAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAA‑TTTGAACTTGTAAAAAATAGC‑‑‑‑TTTTTTTTTTTTTTTATAATGTAAATATAAATTTTAGGTATTTTTTTGT‑CTAAGTATATaaaaaa                                                                              >  2:3473156/1‑128 (MQ=255)
                                                ttttAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAA‑TTTGAACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTAAAATGGAAATATAAATTTTATGTTTTTTTTTGT‑CTAAGTATaaaaaaaa                                                                              >  2:3809658/1‑128 (MQ=255)
                                                 tttAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAA‑TTTGAACTTGTAAAAAATAGCTTTTTTTTTTTTTTTTT‑‑‑TAATGTAAATATAAATTTTATTTTTTTTTTTTT‑ATAATTTAATaaaaaaa                                                                             >  1:3772887/1‑128 (MQ=255)
                                                  ttttttatTTTTTTAATTTTAAAATTTTAAAAAAATAAT‑TTTTAATTTTTAAAAAA‑A‑‑TTTTTTTTTTTTTTTTTTTATAATTGAAATATAAATTTTAGGTATTTTGTTGT‑CTAAGTATCTAAAAAAAt                                                                            <  1:584115/123‑1 (MQ=255)
                                                   tatatatTTTTTTTATATTTAAATTTTTTAAAAATTAA‑TTTTTAATTTTAAAAAAT‑TTTTTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGT‑CTAAGTATCTaaaaaaa                                                                             <  1:1038576/125‑1 (MQ=255)
                                                   tAGTTATTTTTTGTATATTGAAATTTTTAAAAAATTTA‑ATTTAAATTGTAAAAAAATGC‑‑CTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGT‑CTAAGTATCTAAAAAAAt                                                                            <  1:2577967/128‑1 (MQ=255)
                                                    aGATATTTTTTGTATATGCAAATTTTTAAAAAATTAA‑TTTGAACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTATAATGAAAATATAAATTTTAGTTATTTTTTTTT‑ATAATTATATAAAAAATTAg                                                                          >  1:2319456/1‑128 (MQ=255)
                                                     ttttttttttGTATTTTAAAATTTTTAAAAAATTAA‑TTTTAAATTTTAAAAAATA‑‑TCTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGT‑CTAAGTATCTAAAAAAATAg                                                                          <  1:2258090/124‑1 (MQ=255)
                                                     tatatTTTTTGTTTATTTAAATTTTTTAAAAATTAT‑TTTTAAATTTTAAAAAATA‑‑‑TATTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGT‑CTAAGTATCTAAAAAAATAGa                                                                         <  1:525741/127‑1 (MQ=255)
                                                      atatTTTTTGTATATGTAAATTTTTAAAATATTAA‑TTTGAATTTTTAAAAAATA‑‑TCTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGT‑CTAAGTATCTAAAAAAATAGa                                                                         <  1:1893910/128‑1 (MQ=255)
                                                       ttttttttttttATTTAAATTTTTAAAAAATTTA‑TTTTAAAATTTAAAAAAT‑TTTTTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGT‑CTAAGTATCTAAAAAAATAGa                                                                         <  2:2892339/126‑1 (MQ=255)
                                                       tatTTTTTTTTTATTAAAATTTTTTAAAAATTTA‑TTTTTAATTTTAAAAAAT‑TTTTTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGT‑CTAAGTATCTAAAAAAATAGa                                                                         <  2:2815740/128‑1 (MQ=255)
                                                       atttttttttATATGCAAATTTTTAAAAAATTAA‑TTTGAACTTTTAAAAAATAGCTTTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGT‑CTAAGTATCTAAAAAAATAg                                                                          <  1:872348/126‑1 (MQ=255)
                                                        atTTTTTGTATATGCAAATTTTTAAAAAATTAA‑TTTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTATAATGAAAATATAAATTTTAGGTATTTTTTTTT‑CTAATTATATAAAAAAATATaaa                                                                       >  2:3740821/1‑128 (MQ=255)
                                                          tttttGTATATGCAAATTTTTAAAAAATTAA‑TTTGAACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTATAATTGAAATATAAATTTTATGTATTTTTTTGT‑ATAAGTATATAAAAAAATAaaaatta                                                                    >  1:1283845/1‑125 (MQ=255)
                                                           ttttttttattaaaaTTTTTTAAAAATTAA‑TTTTAAATTTTATAAAATA‑‑TATTTTTTTTTTTTTTTTTATAATGTAAATATAAATTTTAGGTATTTTGTTGT‑CTAAGTATCTAAAAAAATAGAAAGGa                                                                    <  1:1009766/116‑1 (MQ=255)
                                                           ttttGTATATGCAAATTTTTAAAAAATTAA‑TTTGAACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTATAATGTAAATATAAATTTTAGTTATTTTGTTGT‑ATAATTATCTAAAAAAATATAAAGTaa                                                                   >  2:2222182/1‑128 (MQ=255)
                                                             tttttattttaaaTTTTTAAAAAATTAA‑TTTTAAATTTTAAAAAAT‑‑TTCTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGT‑CTAAGTATCTAAAAAAATAGAAAGGaaa                                                                  <  2:1335730/118‑1 (MQ=255)
                                                              tGTATATGCAAATTTTTAAAAAATTAA‑TTTGAACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTATAATTGAAATATAAATTTTAGGTATTTTGTTGT‑CTAAGTATATAAAAAAATAGAAAGGaataa                                                                >  1:2477976/1‑128 (MQ=255)
                                                               ttttattaaatttttATAAAAATTTA‑TTTTAACTTTTAAAAAATATC‑TTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGT‑CTAAGTATCTAAAAAAATAGAAAGGaaaa                                                                 <  2:2082904/117‑1 (MQ=255)
                                                                tataTGCAAATTTTTAAAAAATTAA‑TTTGAACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGTTATTTTGTTGT‑CTAAGATTCTAAAAAAATACAAATGAAAAAat                                                              >  1:618125/1‑128 (MQ=255)
                                                                 atatGCAAATTTTTAAAAAATTAA‑TTTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTATAATGTAAATAAAAATTTTATGTATTTTTTTTT‑ATAAGTATATAAAAAAATAAAAAGTAAAAAat                                                              >  2:3343672/1‑128 (MQ=255)
                                                                   atGCAAATTTTTAAAAAATTAA‑TTTGAACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTTTGTATTTTTTTGT‑CTAATTATCTAAAAAAATATAAAGTAAAAAATAtt                                                           >  2:3404863/1‑128 (MQ=255)
                                                                     gCAAATTTTTAAAAAATTAA‑TTTGAACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTTT‑ATAATTATCTAAAAAAATATAAAGTAAAAAATAtttt                                                         >  1:1719644/1‑126 (MQ=255)
                                                                      cAAATTTTTAAAAAATTAA‑TTTGAACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTAAAATGAAAATTTAAATTTTAGTTATTTTTTTTT‑AAAATTATATAAAAAAATA‑AAATGTAAAAATAtttt                                                         >  2:3070623/1‑126 (MQ=255)
                                                                         aTTTTTAAAAAATTAA‑TTTGAACTTGTAAAAAATAGCTTTTTTTTTTTTTTTTTTTTAAATGTAAAAAAAAATTTTAGGTTTTTTTTTTG‑ATAATTTAATAAAAAAATATATA‑GAAAAAataattttt                                                       >  2:3012264/1‑122 (MQ=255)
                                                                             tttaaaaattaa‑ttTTAAATTTTTAAAAAT‑‑‑TTTTTTTTTTTTTTTTTTTATAATTGAAATATAAATTTTAGGTATTTTGTTGT‑CTAAGTATCTAAAAAAATAGAAAGGAAAAAATATTGTTAAAAGTa                                                 <  1:2403639/122‑1 (MQ=255)
                                                                              taaaaaaTTAA‑TTTGAACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTATAATTTAAATATAAATTTTAGTTATTTTTTTGT‑CTAAGTATATAAAAAAATAGAAAGTAAAAAATATTTTAAAAATTaa                                                >  2:3270438/2‑128 (MQ=255)
                                                                               ataaaattaa‑ttTTAAATTTTAAAAAATAGC‑‑‑‑TTTTTTTTTTTTTTTATAATTGAAATATAAATTTTAGGTATTTTGTTGT‑CTAAGTATCTAAAAAAATAGAAAGGAAAAAATATTGTTAAAAGTAATa                                              <  1:286094/124‑1 (MQ=255)
                                                                                aaaaattat‑ttTGAACTTGTAAAAAATAG‑‑GTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGT‑CTAAGTATCTAAAAAAATAGAAAGGAAAAAATATTGTTAAAAGTAAt                                               <  1:1428890/125‑1 (MQ=255)
                                                                                 aaaattaa‑ttTGAACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTATAATGTAAATATAAATTTTAGTTATTTTTTTTT‑ATAAGTATATAAAAAAATATAAAGTAAAAAATATTTTTAAAATTaaaaa                                             >  2:1212378/3‑125 (MQ=255)
                                                                                  aaattaa‑ttTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTATAATTTAAAAATAAATTTTA‑GTATTTTTTTTTAATAATTAAAAAAAAAAAATAAAAGTAAAAAATATT‑TTAAAAATaaataa                                            >  2:226796/2‑124 (MQ=255)
                                                                                   aattaa‑ttTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTTTTGT‑ATAATTATCTAAAAAAATATAAAGGAAAAAATATTGTTAAAATAAATACt                                            >  2:3880642/1‑128 (MQ=255)
                                                                                    attaa‑ttTGAACTTGTAAAAAATAGCTTTTTTTTTTTTTTTTTTTATAATGTAAAAATAAATTTTTGTTATTTTGTTTT‑ATATTTATATAAAAAATTTGAATTAAAAAAATTTTTTAAAAATTAATaa                                             >  2:414788/1‑127 (MQ=255)
                                                                                    attaa‑ttTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGT‑ATAATTATAAAAAAAATTATAAATTAAAAAATATTTTTAAATGTAataata                                           >  1:2037699/1‑128 (MQ=255)
                                                                                     ttaa‑ttTGAACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTAT‑‑TGTAAATAAAAATTTTAGGTATTTTTTTGT‑ATAATTATCATAAAAAATATAAAGTAAAAAATATTGTTAAAATTAATAATaaa                                         >  2:472281/1‑128 (MQ=255)
                                                                                        a‑ttTGAACTTGTAAAAAATAGCTTTTTTTTTTTTTTTTT‑‑‑TAATTGAAATATAAATTTTTTTTATTTTTTTTT‑ATAATTTAATAAAAAAAAAGAAATTTAAAAATATTTTTAAAAATaaaaaataaaaa                                      >  1:3359862/1‑118 (MQ=255)
                                                                                         aattttaattttAAAAAATA‑‑TTTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTATGTATTTTGTTGT‑CTAATTATCTAAAAAAATAGAAAGGAAAAAATATTGTTAAAAGTAATACTAAAat                                       <  1:937588/117‑1 (MQ=255)
                                                                                          tttGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTATAATGTAAATATAAATTTTAATAATTTTTTTGT‑AAAAGTAAAAAAAAAATTATAAATGAAAAAAATTATTTAAAATTAATACTAAAatt                                      >  2:2647305/1‑128 (MQ=255)
                                                                                           ttGAACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTTTTTT‑ATAATTATCTAAAAAAATATAAAGTAAAAAATATTTTTAAAAGTAATAATAAAatt                                      >  1:3881259/1‑128 (MQ=255)
                                                                                             gAACTTGTAAAAAATAGC‑‑TTCTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTTTTGT‑CTAAGTATCTAAAAAAATAGAAAGGAAAAAAAATTTTTAAAAGTAAAAATAAAataatt                                   >  2:2521455/1‑128 (MQ=255)
                                                                                              aaCTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTATTTATAATGGAAATATAAATTTTAGGTATTTTGTTGT‑CTAAGTATCTAAAAAAATAGAAAGGAAAAAATATTGTTAAAAGTAATACTAAAATTAttt                                  <  1:3203490/128‑1 (MQ=255)
                                                                                                tattttttaaaTATTTTTTTTTTTTTTTTTTTTTATAATTGAAATATAAATTTTAGGTATTTTGTTGT‑CTAAGTATCTAAAAAAATAGAAAGGAAAAAATATTGTTAAAAGTAATACTAAAATTAttt                                  <  2:1581908/120‑1 (MQ=255)
                                                                                                    tttttaaaaatattttttttttttttttttATAATGGAAATATAAATTTTAGGTATTTTGTTGT‑CTAAGTATCTAAAAAAATAGAAAGGAAAAAATATTGTTAAAAGTAATACTAAAATTATTTAATg                              <  2:2477976/116‑1 (MQ=255)
                                                                                                    tAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGT‑ATAAGTATCTAAAAAAATAGAAAGGAAAAAATATTTTATAAAGTATTAATAAAATTATTTattttt                            >  1:4011154/1‑123 (MQ=255)
                                                                                                      ttaaaaatatttttttttttttttttttATAATGGAAATATAAATTTTAGGTATTTTGTTGT‑CTAAGTATCTAAAAAAATAGAAAGGAAAAAATATTGTTAAAAGTAATACTAAAATTATTTAATGtt                            <  1:3113987/119‑1 (MQ=255)
                                                                                                       tataattatttttttttttttttttttATAATGGAAATATAAATTTTAGGTATTTTGTTGT‑CTAAGTATCTAAAAAAATAGAAAGGAAAAAATATTGTTAAAAGTAATACTAAAATTATTTAATGtta                           <  2:94732/120‑1 (MQ=255)
                                                                                                         aaTAGC‑TTTTTTTTTTTTTTTAAAAAAATTAAAATATAAATTTAAGATATTTTTTTAA‑AAAAAAATAAAAAAAAATAAAAAAAAAAAAATATTTTTAAAATAAAAAATAAAATTATATaaattatata                        >  2:1489187/1‑120 (MQ=255)
                                                                                                          aaatagctttttttttttttttttATAATGGAAATATAAATTTTAGGTATTTTTTTGT‑CTAAGTTTATAAAAAAATATAAAGGAAAAAATATTTTTAAAAGTAATAATAAAATTATttaattttaatt                        >  1:3467862/8‑128 (MQ=255)
                                                                                                          aaatagctttttttttttttttttAAAAAGTAAAAAAAAATTTAAAATTTTTTGTTGA‑AAAAATAAAAAAAAAAATAAAAATAAAAAAATATTTTAAAAAAAAAAAAAAAAATTATTAAATAttaatt                        >  2:2354521/8‑128 (MQ=255)
                                                                                                           tttttttttttttttttttttttATAATGGAAATATAAATTTTAGGTATTTTGTTGT‑CTAAGTATCTAAAAAAATAGAAAGGAAAAAATATTGTTAAAAGTAATACTAAAATTATTTAATGttaatta                       <  1:2183536/124‑1 (MQ=255)
                                                                                                           aaatttcttttttttttttttttATAATGGAAATATAAATTTTAGGTATTTTGTTGT‑CTAAGTATCTAAAAAAATAGAAAGGAAAAAATATTGTTAAAAGTAATACTAAAATTATTTAATGttaatta                       <  1:1627921/121‑1 (MQ=255)
                                                                                                             tagctttttttttttttttttATATTTGAAATATAATTTTTTGGTATTTTGTTGG‑CTTAGTATGTAAAAAAATTGATTGGATAAAATATTGTTTATAGTATAAATAAAATTATTTATAGttatttata                     >  2:2737871/5‑126 (MQ=255)
                                                                                                               gctttttttttttttttttATAATGGAAATATAAATTTTAGGTATTTTGTTGT‑ATATTTTTCTAAAAAAATATAAATGAAAAAATATTTTTAAAATTAATTATAAAATTATTTAAATTTAAATaaaaa                   >  1:1583524/3‑127 (MQ=255)
                                                                                                                   tttttttttttttttATAATGGAAATATAAATTTTAGGTTTTTTTTTTT‑GTATTTTAAAAAAAAAATATAAAGGTAAAAAAATTTTTAAAATTATTAAAAAATATATATAATTTTAATAAAAAATtat               >  2:1113523/1‑127 (MQ=255)
                                                                                                                   tttttttttttttttATAATGGAAATATAAATTTTAGGTATTTTGTTGT‑CTAAGTATCTAAAAAAATAGAAAGGAAAAAATATTGTTAAAAGTAATACTAAAATTATTTAATGTTAATTAAAACTtaa               <  2:3680488/128‑1 (MQ=255)
                                                                                                                    ttttttttttttttATAATGTAAATATAAATTTTAGTTTTTTTGTTTT‑ATATTTTTATAAAAAAATATAAAGAAAAAAATTTTTTTAAAATTATTAATAAATTTATTTATTTTTAATTAAAAATaaaa              >  1:1347727/1‑128 (MQ=255)
                                                                                                                    ttttttttttttttATAATGGAAATATAAATTTTAGGTATTTTTTTGT‑ATAAGTATCTAAAAAAATATAAAGGAAAAAATATTTTTAAAATTAATACTAAAATTATTAAATTTTaattaaaaattaaa              >  1:3509193/1‑128 (MQ=255)
                                                                                                                     tttttttttttttATAATGGAAATATAAATTTTAGTTTTTTTTTTGT‑AAAATTATAAAAAAAAATATAAAGGAAAAAATATTTTTAAAATTAAAAATAAAATTTTTTAATTTTAATTAAAATTtaaat             >  2:793527/1‑128 (MQ=255)
                                                                                                                      ttttttttttttATAATGGAAATATAAATTTTAGGTTTTTTGTTGT‑ATAAGTATATAAAAAAATAAAAAGTAAAAAATTATTTTAAAATAAAATCTAAAATTATTTAATTTTaattaaaaattaaaaa            >  1:3306837/1‑126 (MQ=255)
                                                                                                                      ttttttttttttATAATGGAAATATAAATTTTAGGTATTTTGTTGT‑CTAAGTATCTAAAAAAATAGAAATGAAAAAATATTGTTAAAAGTAATACTAAAATTATTTAATGTTAATTAAAACTtaaata            <  1:2733314/128‑1 (MQ=255)
                                                                                                                        ttttttttttATATTTGAAATATAAATTTTATGTATTTTGTTGT‑CTAAGTATCTAAAAAAATAGAAAGGAAAAAATATTGTTAAAAGTAATACTAAAATTATTTAATGTTAATTAAAACTtaaataaa          <  2:3140227/128‑1 (MQ=255)
                                                                                                                              ttttATAATGGAAATATAAATTTTAGGTATTTTGTTGT‑CTAAGTATCTAAAAAAATAGAAAGGAAAAAATATTGTTAAAAGTAATACTAAAATTATTTAATGTTAATTAAAACTTAAATAAAACATaa    <  2:167983/128‑1 (MQ=255)
                                                                                                                              ttttATAATGGAAATATAAATTTTAGGTATTTTGTTGT‑CTAAGTATCTAAAAAAATAGAAAGGAAAAAATATTGTTAAAAGTAATACTAAAATTATTTAATGTTAATTAAAACTTAAATAAAACATaa    <  2:2001852/128‑1 (MQ=255)
                                                                                                                                |                                                                                                                                
TAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTAAAAGAATTAA‑TTTGAACTTGTAAAAAATAGCTTTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGT‑CTAAGTATCTAAAAAAATAGAAAGGAAAAAATATTGTTAAAAGTAATACTAAAATTATTTAATGTTAATTAAAACTTAAATAAAACATAAAA  >  CP016816/165140‑165394

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.