Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_021214358,5240TA29.4% 374.5 / 48.4 172intergenic (‑106/‑79)TMARI_RS01730/TMARI_RS01735hypothetical protein/DUF2089 domain‑containing protein
Reads supporting (aligned to +/- strand):  ref base T (23/97);  new base A (50/0);  total (75/97)
Fisher's exact test for biased strand distribution p-value = 1.59e-25
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

Only 100 of 172 total aligned reads displayed.

AAGCACAAAATAAGAATTAATAATTATCTGTTCCTTTTCTGTCCTATCTTCTCGCTGTGAATGGCTATCAACACATCTACCGGTATCAACACAAACATTTTCCTCACCTCCTTTTTGAGAATAATTCTCATCTTTCACATAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGGC‑GGG‑AAAAGGGGC‑AAC‑GAAAATCCTT‑ACAG‑AAAAATTTTTTTG‑GAG‑ACTTG‑A‑CAA‑AATATTTGGTAATATTCTAAAATATTTTGCAGGAGGTGACAAAATA‑TGTTG‑CCCAAGTGCCCGGTCTGTGGAAAAGAAATGATAGTTACAGAGCTTCACTGCAAAAGAGATGAGGTCACCGTGCGAGGACGTTTCAGAGCGAGTCCGTTCGATTTTCTCGATAAAGACGAGCTCGAGTTCGTGATTCTATTTTTCAGAGCGCG  >  NC_021214/358288‑358760
                                                                                                                                                                                                                                                |                                                                                                                                                                                                                                                     
aaGCACAAAATAAGAATTAATAATTATCTGTTCCTTTTCTGTCCTATCTTCTCGCTGTGAATGGCTATCAACACATCTACCGGTATCAACACAAACATTTTCCTCACCTCCTTTTTGAGAATAATTCTCATCTTTCACATAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGGC‑GGG‑AAAAGGGGC‑AAC‑GAAAATCCt                                                                                                                                                                                                                                                    >  2:678212/1‑240 (MQ=255)
   cacaAAATAAGAATTAATAATTATCTGTTCCTTTTCTGTCCTATCTTCTCGCTGTGAATGGCTATCAACACATCTACCGGTATCAACACAAACATTTTCCTCACCTCCTTTTTGAGAATAATTCTCATCTTTCACATAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGGC‑GGG‑AAAAGGGGC‑AAC‑GAAAATCCTT‑Ac                                                                                                                                                                                                                                                <  2:1228979/240‑1 (MQ=255)
       aaaTAAGAATTAATAATTATCTGTTCCTTTTCTGTCCTATCTTCTCGCTGTGAATGGCTATCAACACATCTACCGGTATCAACACAAACATTTTCCTCACCTCCTTTTTGAGAATAATTCTCATCTTTCACATAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGGC‑GGG‑AAAAAGGGG‑AAA‑CACAAACCTT‑AAAG‑aa                                                                                                                                                                                                                                           >  1:1192941/1‑240 (MQ=255)
               aTTAATAATTATCTGTTCCTTTTCTGTCCTATCTTCTCGCTGTGAATGGCTATCAACACATCTACCGGTATCAACACAAACATTTTCCTCACCTCCTTTTTGAGAATAATTCTCATCTTTCACATAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGGC‑GGG‑AAAAAGGGC‑AAA‑GAAAAAACTT‑TCAA‑AAAAAatttt                                                                                                                                                                                                                                   >  1:169591/1‑240 (MQ=255)
                 taataaTTATCTGTTCCTTTTCTGTCCTATCTTCTCGCTGTGAATGGCTATCAACACATCTACCGGTATCAACACAAACATTTTCCTCACCTCCTTTTTGAGAATAATTCTCATCTTTCACATAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGGC‑GGG‑GAAAAAAGA‑AAC‑AAAAAAAATT‑AAAA‑AAAAAttttttt                                                                                                                                                                                                                                 >  2:794062/1‑240 (MQ=255)
                       ttATCTGTTCCTTTTCTGTCCTATCTTCTCGCTGTGAATGGCTATCAACACATCTACCGGTATCAACACAAACATTTTCCTCACCTCCTTTTTGAGAATAATTCTCATCTTTCACATAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGGC‑GGG‑AAAAAGGGC‑AAA‑AAAAAACACT‑ACAC‑AAAAAattttttttgg                                                                                                                                                                                                                             >  2:1256431/1‑234 (MQ=255)
                       ttATCTGTTCCTTTTCTGTCCTATCTTCTCGCTGTGAATGGCTATCAACACATCTACCGGTATCAACACAAACATTTTCCTCACCTCCTTTTTGAGAATAATTCTCATCTTTCACATAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGGC‑GGG‑AAAAAAAGG‑AAC‑GAAAAACCTT‑ACAG‑AAAAAATTTTTTgttgga                                                                                                                                                                                                                           >  2:9704/1‑235 (MQ=255)
                         aTCTGTTCCTTTTCTGTCCTATCTTCTCGCTGTGAATGGCTATCAACACATCTACCGGTATCAACACAAACATTTTCCTCACCTCCTTTTTGAGAATAATTCTCATCTTTCACATAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGGC‑GGG‑AAAAGGGGC‑AAC‑GAAAATCCTT‑ACAG‑AAAAATTTTTTTG‑GAG‑ACtt                                                                                                                                                                                                                       <  2:317601/240‑1 (MQ=255)
                              ttCCTTTTCTGTCCTATCTTCTCGCTGTGAATGGCTATCAACACATCTACCGGTATCAACACAAACATTTTCCTCACCTCCTTTTTGAGAATAATTCTCATCTTTCACATAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGGCGGGG‑AAAAAGGGA‑AAC‑‑AAAAAACTT‑ACAA‑AAAAAATTTTTTT‑gagggtttgcaa                                                                                                                                                                                                                   >  2:26690/1‑231 (MQ=255)
                                   tttCTGTCCTATCTTCTCGCTGTGAATGGCTATCAACACATCTACCGGTATCAACACAAACATTTTCCTCACCTCCTTTTTGAGAATAATTCTCATCTTTCACATAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGGC‑GGG‑AAAAGGGGC‑AAC‑GAAAATCCTT‑ACAG‑AAAAATTTTTTTG‑GAG‑ACTTG‑A‑CAA‑Aatat                                                                                                                                                                                                          <  2:160562/240‑1 (MQ=255)
                                   tttCTGTCCTATCTTCTCGCTGTGAATGGCTATCAACACATCTACCGGTATCAACACAAACATTTTCCTCACCTCCTTTTTGAGAATAATTCTCATCTTTCACATAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGGC‑GGG‑AAAAGGGGC‑AAC‑GAAAATCCTT‑ACAG‑AAAAATTTTTTTG‑GAG‑ACTTG‑A‑CAA‑Aatat                                                                                                                                                                                                          <  1:202632/240‑1 (MQ=255)
                                       tGTCCTATCTTCTCGCTGTGAATGGCTATCAACACATCTACCGGTCTCAACACAAACATTTTCCTCACCTCCTTTTTGAGAATAATTCTCATCTTTCACATAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGGC‑GGG‑AAAACGAGC‑AAA‑GACAACACTT‑ACAA‑CAAACATTTTTGT‑GTG‑AGGTG‑A‑CAC‑AACATTTgt                                                                                                                                                                                                      >  2:1279304/1‑239 (MQ=255)
                                       tGTCCTATCTTCTCGCTGTGAATGGCTATCAACACATCTACCGGTATCAACACAAACATTTTCCTCACCTCCTTTTTGAGAATAATTCTCATCTTTCACATAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGGC‑GGG‑AAAAAAGAC‑GAC‑GCAAATACTC‑AAAA‑AAAAATTTTTTTT‑TAG‑ACATG‑A‑CAACAAAATTTg                                                                                                                                                                                                       >  2:716264/1‑240 (MQ=255)
                                          ccTATCTTCTCGCTGTGAATGGCTATCAACACATCTACCGGTATCAACACAAACATTTTCCTCACCTCCTTTTTGAGAATAATTCTCATCTTTCACATAAGAGTGTACCACCGGTGTATTAAAAATC‑AATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGGC‑GGG‑AAAAAAGGG‑AACGGAAAAACTTA‑ACAA‑AAAAATATTTTTGTGAG‑A‑TGT‑A‑AAA‑AATATTTTGTaa                                                                                                                                                                                                   >  2:1334846/1‑240 (MQ=255)
                                           cTATCTTCTCGCTGTGAATGGCTATCAACACATCTACCGGTATCAACACAAACATTTTCCTCACCTCCTTTTTGAGAATAATTCTCATCTTTCACATAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGGC‑GGG‑AAAAGGGGC‑AAC‑GAAAATCCTT‑ACAG‑AAAAATTTTTTTG‑GAG‑ACTTG‑A‑CAA‑AATATTTGGTAat                                                                                                                                                                                                  <  1:677557/240‑1 (MQ=255)
                                             aTCTTCTCGCTGTGAATGGCTATCAACACATCTACCGGTATCAACACAAACATTTTCCTCACCTCCTTTTTGAGAATAATTCTCATCTTTCACATAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGGC‑GGG‑AAAAGGGGC‑AAC‑GAAAATCCTT‑ACAG‑AAAAATTTTTTTG‑GAG‑ACTTG‑A‑CAA‑AATATTTGGTAatat                                                                                                                                                                                                <  1:1075452/240‑1 (MQ=255)
                                                  ctcGCTGTGAATGGCTATCAACACATCTACCGGTATCAACACAAACATTTTCCTCACCTCCTTTTTGAGAATAATTCTCATCTTTCACATAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGGC‑GGG‑AAAAAGGGG‑AAC‑GAAAAAACTT‑AAAG‑AAAAAATTTTTTT‑GGG‑ACTTG‑A‑GAA‑AAAAATTTGTaaatttttta                                                                                                                                                                                           >  1:315476/1‑232 (MQ=255)
                                                  ctcGCTGTGAATGGCTATCAACACATCTACCGGTATCAACACAAACATTTTCCTCACCTCCTTTTTGAGAATAATTCTCATCTTTCACATAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGGC‑GGG‑AAAAAGGGC‑AAT‑GAAAAAACTTAAAAA‑AAAAATTTTTTTG‑GGT‑ACTTT‑A‑‑AA‑AAAAATTGGTAATAATCTaa                                                                                                                                                                                           >  2:670543/1‑240 (MQ=255)
                                                     gCTGTGAATGGCTATCAACACATCTACCGGTATCAACACAAACATTTTCCTCACCTCCTTTTTGAGAATAATTCTCATCTTTCACATAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGGC‑GGG‑AAAAGGGGC‑AAC‑GAAAATCCTT‑ACAG‑AAAAATTTTTTTG‑GAG‑ACTTG‑A‑CAA‑AATATTTGGTAATATTCTAAAat                                                                                                                                                                                        <  2:496159/240‑1 (MQ=255)
                                                              tgCTATCAACACATCTACCGGTATCAACACAAACATTTTCCTCACCTCCTTTTTGAGAATAATTCTCATCTTTCACATAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGGC‑GGG‑AAAAGGGGC‑AAC‑GAAAATCCTT‑ACAG‑AAAAATTTTTTTG‑GAG‑ACTTG‑A‑CAA‑AATATTTGGTAATATTCTAAAATATTTTGCag                                                                                                                                                                               <  2:1415642/239‑1 (MQ=255)
                                                              ggCTATCAACACATCTACCGGTATCAACACAAACATTTTCCTCACCTCCTTTTTGAGAATAATTCTCATCTTTCACATAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGGC‑GGG‑CAAAAGGGC‑AAC‑GAAAAACCTT‑ACAG‑AAAAAATTTTTTT‑GAG‑GATTT‑A‑CAA‑AATATTTGGTAATATTCTACAATAttttttag                                                                                                                                                                               >  1:95105/1‑236 (MQ=255)
                                                              ggCTATCAACACATCTACCGGTATCAACACAAACATTTTCCTCACCTCCTTTTTGAGAATAATTCTCATCTTTCACATAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGGC‑GGG‑AAAAGGGGC‑AAC‑GAAAATCCTT‑ACAG‑AAAAATTTTTTTG‑GAG‑ACTTG‑A‑CAA‑AATATTTGGTAATATTCTAAAATATTTTGCag                                                                                                                                                                               <  1:1001282/240‑1 (MQ=255)
                                                               gCTATCAACACATCTACCGGTATCAACACAAACATTTTCCTCACCTCCTTTTTGAGAATAATTCTCATCTTTCACATAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGGCGGGG‑AAAAGGGGA‑AAA‑AAAAAACCTT‑CAAA‑AAAAATTTTTTTG‑GGA‑ACTTG‑A‑AAA‑AAAATTTGGAAAAATTTTAAAAATttttatgg                                                                                                                                                                               >  2:1152272/1‑236 (MQ=255)
                                                                    cAACACATCTACCGGTATCAACACAAACATTTTCCTCACCTCCTTTTTGAGAATAATTCTCATCTTTCACATAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGGC‑GGG‑AAAAGGGGC‑AAC‑GAAAATCCTT‑ACAG‑AAAAATTTTTTTG‑GAG‑ACTTG‑A‑CAA‑AATATTTGGTAATATTCTAAAATATTTTGCAGGAGGTg                                                                                                                                                                         <  1:809669/240‑1 (MQ=255)
                                                                    cAACACATCTACCGGTATCAACACAAACATTTTCCTCACCTCCTTTTTGAGAATAATTCTCATCTTTCACATAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGGC‑GGG‑AAAAGGGGC‑AAC‑GAAAATCCTT‑ACAG‑AAAAATTTTTTTG‑GAG‑ACTTG‑A‑CAA‑AATATTTGGTAATATTCTAAAATATTTTGCAGGAGGTg                                                                                                                                                                         <  1:1206089/240‑1 (MQ=255)
                                                                    cAACACATCTACCGGTATCAACACAAACATTTTCCTCACCTCCTTTTTGAGAATAATTCTCATCTTTCACATAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGGC‑GGG‑AAAAGGGGC‑AAC‑GAAAATCCTT‑ACAG‑AAAAATTTTTTTG‑GAG‑ACTTG‑A‑CAA‑AATATTTGGTAATATTCTAAAATATTTTGCAGGAGGTg                                                                                                                                                                         <  2:259437/240‑1 (MQ=255)
                                                                    cAACACATCTACCGGTATCAACACAAACATTTTCCTCACCTCCTTTTTGAGAATAATTCTCATCTTTCACATAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGGC‑GGG‑AAAAAGGGC‑AAC‑CAAAAAACCT‑ACAG‑AAAAAATTTTTTG‑GAA‑ATCTG‑A‑AAA‑AAAATTTGTAAATAGACTCAAAAAttttttctgatgta                                                                                                                                                                         >  2:1333419/1‑230 (MQ=255)
                                                                     aaCACATCTACCGGTATCAACACAAACATTTTCCTCACCTCCTTTTTGAGAATAATTCTCATCTTTCACATAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGGC‑GGG‑AAAAGGGGC‑AAC‑GAAAATCCTT‑ACAG‑AAAAATTTTTTTG‑GAG‑ACTTG‑A‑CAA‑AATATTTGGTAATATTCTAAAATATTTTGCAGGAGGTGa                                                                                                                                                                        <  1:8927/240‑1 (MQ=255)
                                                                     aaCACATCTACCGGTATCAACACAAACATTTTCCTCACCTCCTTTTTGAGAATAATTCTCATCTTTCACATAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGGC‑GGG‑AAAAGGGGC‑AAC‑GAAAATCCTT‑ACAG‑AAAAATTTTTTTG‑GAG‑ACTTG‑A‑CAA‑AATATTTGGTAATATTCTAAAATATTTTGCAGGAGGTGa                                                                                                                                                                        <  1:1048283/240‑1 (MQ=255)
                                                                         caTCTACCGGTATCAACACAAACATTTTCCTCACCTCCTTTTTGAGAATAATTCTCATCTTTCACATAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGGC‑GGG‑AAAAAGGGC‑AAC‑GAAAAAACTT‑ACAC‑AAAAAATTTTTTT‑GGG‑ACTTT‑A‑CAA‑AAAATTTTGTAATATTTTAAAATATTTTTTaggaggggggaaa                                                                                                                                                                    >  1:507123/1‑233 (MQ=255)
                                                                             tACCGGTATCAACACAAACATTTTCCTCACCTCCTTTTTGAGAATAATTCTCATCTTTCACATAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGGC‑GGG‑AAAAGGGGC‑AAC‑GAAAATCCTT‑ACAG‑AAAAATTTTTTTG‑GAG‑ACTTG‑A‑CAA‑AATATTTGGTAATATTCTAAAATATTTTGCAGGAGGTGACAAAata‑t                                                                                                                                                               <  2:531026/240‑1 (MQ=255)
                                                                              aCCGGTATCAACACAAACATTTTCCTCACCTCCTTTTTGAGAATAATTCTCATCTTTCACATAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGGC‑GGG‑GAAAAGGGG‑AAC‑AAAAAAACAT‑AACG‑AAAAAATTTTTTT‑GAG‑GCTTT‑A‑CAA‑AAAATTTTGGAAAATTTTAAAATATTTTGTAGGAGGGGACAAAAAA‑Tg                                                                                                                                                              >  1:746251/1‑240 (MQ=255)
                                                                                 ggTATCAACACAAACATTTTCCTCACCTCCTTTTTGAGAATAATTCTCATCTTTCACATAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGGC‑GGG‑AAAAAAGGC‑AAA‑CAAAAACCTT‑ACAA‑AAAAATATTTTTT‑TAG‑AAGTT‑A‑CAA‑AAAAATTGGTAAAATTCTAACATAATTTTCAGAAGGTTGCAACataatgtg                                                                                                                                                            >  1:595256/1‑235 (MQ=255)
                                                                                   tATCAACACAAACATTTTCCTCACCTCCTTTTTGAGAATAATTCTCATCTTTCACATAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGGC‑GGG‑AAAAGGGGC‑AAC‑GAAAAAACTT‑TCCA‑AAAAATTTTTTTT‑GAG‑ACTTT‑A‑CCA‑AAAATTTGGTAATATTCTAAAATAATTTTCAGGAGGGGACAAAATA‑tttttc                                                                                                                                                          >  1:160448/1‑237 (MQ=255)
                                                                                   tATCAACACAAACATTTTCCTCACCTCCTTTTTGAGAATAATTCTCATCTTTCACATAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGGC‑GGG‑AAAAAGGGG‑AAC‑GAAAAAACAT‑ATAG‑AAAAATTTTTTTG‑GAG‑ACTTG‑A‑CAA‑AATATTTAGTAATATTCTAAAAAATTTTTCTAGAGGGGACaaaaaaattttg                                                                                                                                                           >  2:688532/1‑231 (MQ=255)
                                                                                   tATCAACACAAACATTTTCCTCACCTCCTTTTTGAGAATAATTCTCATCTTTCACATAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGGC‑GGG‑AAAAAGAGG‑AAA‑AAAAAAACTT‑AAAA‑AAAAATTTTTTTT‑GAGAAGTTG‑G‑CAA‑AA‑ATTTTGGAAAATTCTAAAAAATTTTTTCTGAGGGGAAAAAATA‑TTTTG‑c                                                                                                                                                         >  1:695241/1‑239 (MQ=255)
                                                                                   tATCAACACAAACATTTTCCTCACCTCCTTTTTGAGAATAATTCTCATCTTTCACATAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGGA‑GGG‑AAAAAAGGC‑AAA‑GAAAATAATT‑ACAG‑AAAAAATTTTTTG‑GAG‑AGTTT‑G‑AAA‑AATAATTTGTACTAATTTACAAAAATTTTTTGGAGGAGAGAAAACA‑TAtttg                                                                                                                                                          >  2:906635/1‑237 (MQ=255)
                                                                                    aTCAACACAAACATTTTCCTCACCTCCTTTTTGAGAATAATTCTCATCTTTCACATAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGGC‑GTG‑AAAAGGGGC‑AAC‑GAAAATCCTT‑ACAG‑AAAAATTTTTTTG‑GAG‑ACTTG‑A‑CAA‑AATATTTGGTAATATTCTAAAATATTTTGCAGGAGGTGACAAAATA‑TGTTG‑ccc                                                                                                                                                       >  1:1428455/1‑240 (MQ=255)
                                                                                           caAACATTTTCCTCACCTCCTTTTTGAGAATAATTCTCATCTTTCACATAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGGC‑GGG‑AAAAGGGGC‑AAC‑GAAAATCCTT‑ACAG‑AAAAATTTTTTTG‑GAG‑ACTTG‑A‑CAA‑AATATTTGGTAATATTCTAAAATATTTTGCAGGAGGTGACAAAATA‑TGTTG‑CCCAAGTGcc                                                                                                                                                <  2:392177/240‑1 (MQ=255)
                                                                                            aaaCATTTTCCTCACCTCCTTTTTGAGAATAATTCTCATCTTTCACATAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGGC‑GGG‑GAAAGGGGCGAAC‑AAAAATCTTA‑AAAA‑AAAAATTTTTTTG‑GGG‑A‑TTG‑A‑TAA‑AAAAATTTGTTATATTTTTAAAAAATTTTTAGGAGGGGGAAAAAAA‑TGtttttccaaagacc                                                                                                                                                >  2:780157/1‑228 (MQ=255)
                                                                                            aaaCATTTTCCTCACCTCCTTTTTGAGAATAATTCTCATCTTTCACATAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGGC‑GGG‑AAAAGGGGC‑AAC‑GAAAATCCTT‑ACAG‑AAAAATTTTTTTG‑GAG‑ACTTG‑A‑CAA‑AATATTTGGTAATATTCTAAAATATTTTGCAGGAGGTGACAAAATA‑TGTTG‑CCCAAGTGccc                                                                                                                                               <  1:1091262/240‑1 (MQ=255)
                                                                                               cATTTTCCTCACCTCCTTTTTGAGAATAATTCTCATCTTTCACAT‑AGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGGC‑GGG‑AAAAGGGGC‑AAC‑GAAAATCCTT‑ACAG‑AAAAATTTTTTTG‑GAG‑ACTTG‑A‑CAA‑AATATTTGGTAATATTCTAAAATATTTTGCAGGAGGTGCCAAAATA‑TGTTG‑CCCAAGTGCCCGGTc                                                                                                                                           <  2:170196/240‑1 (MQ=255)
                                                                                                aTTTTCCTCACCTCCTTTTTGAGAATAATTCTCATCTTTCACATAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGGC‑GGG‑GAAAAAGGG‑AAC‑GAAAAAAATT‑ATAG‑AAAAATTTTTTTT‑GTG‑AGTTG‑A‑CAA‑AAAAATTGGTAATATTCTAAAAAATTTTTTAAGAGGGGGGAAAAAA‑AATTT‑GCCAAATGCCCGGta                                                                                                                                           >  2:44798/1‑239 (MQ=255)
                                                                                                aTTTTCCTCACCTCCTTTTTGAGAATAATTCTCATCTTTCACATAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGGC‑GGG‑AAAAGGGGC‑AAC‑GAAAATCCTT‑ACAG‑AAAAATTTTTTTG‑GAG‑ACTTG‑A‑CAA‑AATATTTGGTAATATTCTAAAATATTTTGCAGGAGGTGACAAAATA‑TGTTG‑CCCAAGTGCCCGGTc                                                                                                                                           <  2:829787/240‑1 (MQ=255)
                                                                                                  tttCCTCACCTCCTTTTTGAGAATAATTCTCATCTTTCACATAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGGC‑GGG‑GAAAAGGGC‑AAC‑GAAAATCCTT‑ACCG‑AAAAAATTTTTTT‑GAC‑GCGTG‑ACCAA‑AATATTT‑GTAAATTTTTAAAATAATTTTTAGGGGGTGGTCAAAAA‑AGTTT‑CCCCAATGCCCgg                                                                                                                                             >  2:643653/1‑236 (MQ=255)
                                                                                                   ttCCTCACCTCCTTTTTGAGAATAATTCTCATCTTTCACATAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGGC‑GGG‑AAAAAGGGC‑AAC‑GAAAAACCTT‑ACAG‑AAAAATTTTTTTT‑GGG‑ACTTT‑A‑CAA‑AAAATTTTGTAATATTTTAAAATATTTTTTAGGAGGGGGAAAAAAA‑TGTTT‑TCCAAGTGCCCGGTCttt                                                                                                                                        >  2:715462/1‑238 (MQ=255)
                                                                                                    tCCTCACCTCCTTTTTGAGAATAATTCTCATCTTTCACATAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGGC‑GGG‑AAAAGGGGC‑AAC‑GAAAATCCTT‑ACAG‑AAAAATTTTTTTG‑GAG‑ACTTG‑A‑CAA‑AATATTTGGTAATATTCTAAAATATTTTGCAGGAGGTGACAAAATA‑TGTTG‑CCCAAGTGCCCGGTCtgtg                                                                                                                                       <  2:245439/240‑1 (MQ=255)
                                                                                                       tCACCTCCTTTTTGAGAATAATTCTCATCTTTCACATAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGGC‑GGG‑AAAAGGGGC‑AAC‑GAAAATCCTT‑ACAG‑AAAAATTTTTTTG‑GAG‑ACTTG‑A‑CAA‑AATATTTGGTAATATTCTAAAATATTTTGCAGGAGGTGACAAAATA‑TGTTG‑CCCAAGTGCCCGGTCTGTGGaa                                                                                                                                    <  1:1347682/240‑1 (MQ=255)
                                                                                                        cACCTCCTTTTTGAGAATAATTCTCATCTTTCACATAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGGC‑GGG‑AAAAGGGGC‑AAC‑GAAAATCCTT‑ACAG‑AAAAATTTTTTTG‑GAG‑ACTTG‑A‑CAA‑AATATTTGGTAATATTCTAAAATATTTTGCAGGAGGTGACAAAATA‑TGTTG‑CCCAAGTGCCCGGTCTGTGGaaa                                                                                                                                   <  1:904549/240‑1 (MQ=255)
                                                                                                         aCCTCCTTTTTGAGAATAATTCTCATCTTTCACATAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGGC‑GGG‑AAAAGGGGC‑AAC‑GAAAATCCTT‑ACAG‑AAAAATTTTTTTG‑GAG‑ACTTG‑A‑CAA‑AATATTTGGTAATATTCTAAAATATTTTGCAGGAGGTGACAAAATA‑TGTTG‑CCCAAGTGCCCGGTCTGTGGaaaa                                                                                                                                  <  1:460759/240‑1 (MQ=255)
                                                                                                           ctcctTTTTGAGAATAATTCTCATCTTTCACATAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGGC‑GGG‑AAAAAGGGG‑AAC‑GAAAAAACTT‑TCAG‑AAAAATTTTTTTT‑GAG‑ACTTG‑A‑AAA‑AATATTTTGTAATATTTTAAAAAAATTTTTAAGAGGTGAAAAAAAATTGTTT‑CCCAA‑TGACCCGTCTGTTGGAAAGa                                                                                                                                >  1:1035943/1‑240 (MQ=255)
                                                                                                             cctTTTTGAGAATAATTCTCATCTTTCACATAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGGC‑GGG‑AAAAGGGGC‑AAC‑GAAAATCCTT‑ACAG‑AAAAATTTTTTTG‑GAG‑ACTTG‑A‑CAA‑AATATTTGGTAATATTCTAAAATATTTTGCAGGAGGTGACAAAATA‑TGTTG‑CCCAAGTGCCCGGTCTGTGGAAAAGaaa                                                                                                                              <  1:715462/240‑1 (MQ=255)
                                                                                                             cctTTTTGAGAATAATTCTCATCTTTCACATAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGGC‑GGG‑AAAAGGGGC‑AAC‑GAAAATCCTT‑ACAG‑AAAAATTTTTTTG‑GAG‑ACTTG‑A‑CAA‑AATATTTGGTAATATTCTAAAATATTTTGCAGGAGGTGACAAAATA‑TGTTG‑CCCAAGTGCCCGGTCTGTGGAAAAGaaa                                                                                                                              <  1:44798/240‑1 (MQ=255)
                                                                                                               tttttGAGAATAATTCTCATCTTTCACATAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGGC‑GGG‑GAAAAGGGG‑AAC‑GAAAAACCTT‑AAAG‑AAAAAATTTTTTT‑GAG‑ACTTT‑A‑AAA‑AAAAATTGGTAATATTCTAAAAAATTTTTCAGGAGGGGGAAAAATA‑TTTTG‑TCCAAATGGCCGGGCTGTGGGAAAGAAATg                                                                                                                            >  1:369947/1‑240 (MQ=255)
                                                                                                               tttttGAGAATAATTCTCATCTTTCACATAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGGC‑GGG‑AAAAGGGGC‑AAC‑GAAAATCCTT‑ACAG‑AAAAATTTTTTTG‑GAG‑ACTTG‑A‑CAA‑AATATTTGGTAATATTCTAAAATATTTTGCAGGAGGTGACAAAATA‑TGTTG‑CCCAAGTGCCCGGTCTGTGGAAAAGAAATg                                                                                                                            <  2:1455522/240‑1 (MQ=255)
                                                                                                                ttttGAGAATAATTCTCATCTTTCACATAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGGC‑GGG‑GAAAGGGGC‑AAA‑GAAAAATCTT‑ATAG‑AAAAAATTATTTG‑GAG‑ACATGTA‑CAA‑AA‑ATTTGGTAAAAATTTAAAAAATTTTTCAGGAGGGGACAAAAAA‑TGTTG‑GCCAAAATCCCGGGCTGTGGgaaagaaaata                                                                                                                           >  1:527366/1‑237 (MQ=255)
                                                                                                                    gagaATAATTCTCATCTTTCACATAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGGC‑GGG‑AAAAAGGGG‑AAC‑GAAAAAACTT‑ACAG‑AAAAAATTTTTTG‑TTG‑ACTTG‑A‑CAA‑AAAATTTTGTAATATTCTCAAATATTTTTCAGGAGGTGGCAAAATA‑TGTTG‑CCCAAATGCCCGGTCTTTGGTGAAGAAATGATAGt                                                                                                                       >  1:1392890/1‑240 (MQ=255)
                                                                                                                               tcATTTTTCACATAAGAGTGTACCACCTGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGGC‑GGG‑AAAAGGGGC‑AAC‑GAAAATCCTT‑ACAG‑AAAAATTTTTTTG‑GAG‑ACTTG‑A‑CAA‑AATATTTGGTAATATTCTAGAATATTTTGCAGGAGGTGACAAAATA‑TGTTG‑CCCAAGTGCCCGGGCTGTGGAAAAGAAATGATAGTTACAGAGCTTc                                                                                                            <  2:1015788/240‑1 (MQ=255)
                                                                                                                               tcATCTTTCACATAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGTCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGGC‑GGG‑AAAAGGGGC‑AAC‑GAAAATCCTT‑ACAG‑AAAAATTTTTTTG‑GAG‑ACTTG‑A‑CAA‑AATATTTGGTAATATTCTAAAATATTTTGCAGGAGGTGACAAAATA‑TGTTG‑CCCAAGTGCCCGGTCTGTGGAAAAGAAATGATAGTTACAGAGCTTc                                                                                                            <  1:1284788/240‑1 (MQ=255)
                                                                                                                               tcATCTTTCACATAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGGC‑GGG‑AAAAGGGGC‑AAC‑GAAAATCCTT‑ACAG‑AAAAATTTTTTTG‑GAG‑ACTTG‑A‑CAA‑AATATTTGGTAATATTCTAAAATATTTTGCAGGAGGTGACAAAATA‑TGTTG‑CCCAAGTGCCCGGTCTGTGGAAAAGAAATGATAGTTACAGAGCTTc                                                                                                            <  1:9704/240‑1 (MQ=255)
                                                                                                                               tcATCTTTCACATAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGGC‑GGG‑AAAAGGGGC‑AAC‑GAAAATCCTT‑ACAG‑AAAAATTTTTTTG‑GAG‑ACTTG‑A‑CAA‑AATATTTGGTAATATTCTAAAATATTTTGCAGGAGGTGACAAAATA‑TGTTG‑CCCAAGTGCCCGGTCTGTGGAAAAGAAATGATAGTTACAGAGCTTc                                                                                                            <  1:1050285/240‑1 (MQ=255)
                                                                                                                                    tttCACATAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGGC‑GGG‑AAAAGGGGC‑AAC‑GAAAATCCTT‑ACAG‑AAAAATTTTTTTG‑GAG‑ACTTG‑A‑CAA‑AATATTTGGTAATATTCTAAAATATTTTGCAGGAGGTGACAAAATA‑TGTTG‑CCCAAGTGCCCGGTCTGTGGAAAAGAAATGATAGTTACAGAGCTTCACTGc                                                                                                       <  1:137822/240‑1 (MQ=255)
                                                                                                                                     ttCACATAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGGC‑GGG‑AAAAAAGGG‑AAC‑GAAAAAACTT‑ACAGAAAAAATTTTTTTG‑GGG‑A‑TTG‑A‑CAA‑AATAATTGGTAATATTCTAAAATATTTTTTTGGAGGGGACAAAATA‑TTTTG‑CCCAAATGCCCCGGCTGTGGGAAAGAAATGAAAATTACAAAAGTTCACTGCa                                                                                                      >  2:1371093/1‑240 (MQ=255)
                                                                                                                                                 tgtACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGGC‑GGGCAAAAGGGGA‑AAC‑‑AAAAAACTT‑ACAG‑AAAAAATTTTTTT‑GGG‑AAATT‑A‑CAA‑AAAATTTGGGAAAATTCTAAAATATTTTTTACGAGGTGAAAAAAAA‑TGTTT‑CCCCCATGGACGGGTTGTGGGAAAAAAAAGATAGGTTAAAAGATTCACTTCAAAAAAAATGAgg                                                                                          >  2:360069/1‑240 (MQ=255)
                                                                                                                                                  gtACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGGC‑GGG‑AAAAGGGGC‑AAC‑GAAAATCCTT‑ACAG‑AAAAATTTTTTTG‑GAG‑ACTTG‑A‑CAA‑AATATTTGGTAATATTCTAAAATATTTTGCAGGAGGTGACAAAATA‑TGTTG‑CCCAAGTGCCCGGTCTGTGGAAAAGAAATGATAGTTACAGAGCTTCACTGCAAAAGAGATGAGGt                                                                                         <  1:297673/240‑1 (MQ=255)
                                                                                                                                                  gtACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGGC‑GGG‑AAAAAGGGG‑GAC‑GAAAAAACTT‑ACAG‑AAAAAATTTTTTT‑GGG‑ACTTT‑A‑CAA‑AAAAATTGGGAATATTCTAAAAAATTTTTCAGGAGGTGGAAAAAAA‑TGTTT‑CCCAAATGCCCGGTCTGTGGGAAAAAAAAAATAGTTTAAAAGCTTCAATGCAAAAAAGATGAggg                                                                                         >  1:33007/1‑239 (MQ=255)
                                                                                                                                                      caccGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGGC‑GGG‑AAAAGGGGC‑AAC‑GAAAATCCTT‑ACAG‑AAAAATTTTTTTG‑GAG‑ACTTG‑A‑CAA‑AATATTTGGTAATATTCTAAAATATTTTGCAGGAGGTGACAAAATA‑TGTTG‑CCCAAGTGCCCGGTCTGTGGAAAAGAAATGATAGTTACAGAGCTTCACTGCAAAAGAGATGAGGTCAcc                                                                                     <  1:659099/240‑1 (MQ=255)
                                                                                                                                                          ggTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGGC‑GGG‑GAAAAGGGG‑AAC‑GAAAAAACAT‑ACAG‑AAAAAATTTTTTT‑GGG‑AATTG‑A‑AAA‑AAAAATTGGTAATATTTTAAAATAATTTTTATGAGGGGACAAAAAA‑AATTT‑TCCAAATGACCGGGCTGTGGGAAAGAAAAGATAATTAAAGAGATTCACTGCAAAAAAGaggagggggacgtag                                                                                 >  2:1064764/1‑231 (MQ=255)
                                                                                                                                                            tgtATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGGC‑GGG‑AAAAGGGGC‑AAC‑GAAAATCCTT‑ACAG‑AAAAATTTTTTTG‑GAG‑ACTTG‑A‑CAA‑AATATTTGGTAATATTCTAAAATATTTTGCAGGAGGTGACAAAATA‑TGTTG‑CCCAAGTGCCCGGTCTGTGGAAAAGAAATGATAGTTACAGAGCTTCACTGCAAAAGAGATGAGGTCACCGTGCg                                                                                <  2:1420168/239‑1 (MQ=255)
                                                                                                                                                               aTTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGGC‑GGG‑AAAAGGGGC‑AAC‑GAAAATCCTT‑ACAG‑AAAAATTTTTTTG‑GAG‑ACTTG‑A‑CAA‑AATATTTGGTAATATTCTAAAATATTTTGCAGGAGGTGACAAAATA‑TGTTG‑CCCAAGTGCCCGGTCTGTGGAAAAGAAATGATAGTTACAGAGCTTCACTGCAAAAGAGATGAGGTCACCGTGCGAGGa                                                                            <  1:1225706/240‑1 (MQ=255)
                                                                                                                                                                ttAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGGC‑GGG‑AAAAGGGGC‑AAC‑GAAAATCCTT‑ACAG‑AAAAATTTTTTTG‑GAG‑ACTTG‑A‑CAA‑AATGTTTGGTAATATTCTAAAATATTTTGCAGGAGGTGACAAAATA‑TGTTG‑CCCAAGTGCCCGGTCTGTGGAAAAGAAATGATAGTTACAGAGCTTCACTGCAAAAGAGATGAGGTCACCGTGCGAGGAc                                                                           <  1:881729/240‑1 (MQ=255)
                                                                                                                                                                     aaTCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGGC‑GGG‑AAAAGGGGC‑AAC‑GAAAATCCTT‑ACAG‑AAAAATTTTTTTG‑GAG‑ACTTG‑A‑CAA‑AATATTTGGTAATATTCTAAAATATTTTGCAGGAGGTGACAAAATA‑TGTTG‑CCCAAGTGCCCGGTCTGTGGAAAAGAAATGATAGTTACAGAGCTTCACTGCAAAAGAGATGAGGTCACCGTGCGAGGACGTTTc                                                                      <  1:1153196/240‑1 (MQ=255)
                                                                                                                                                                     aaTCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGGC‑GGG‑AAAAGGGGC‑AAC‑GAAAATCCTT‑ACAG‑AAAAATTTTTTTG‑GAG‑ACTTG‑A‑CAA‑AATATTTGGTAATATTCTAAAATATTTTGCAGGAGGTGACAAAATA‑TGTTG‑CCCAAGTGCCCGGTCTGTGGAAAAGAAATGATAGTTACAGAGCTTCACTGCAAAAGAGATGAGGTCACCGTGCGAGGACGTTTc                                                                      <  1:794062/240‑1 (MQ=255)
                                                                                                                                                                              aGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGGC‑GGG‑AAAAGGGGC‑AAC‑GAAAATCCTT‑ACAG‑AAAAATTTTTTTG‑GAG‑ACTTG‑A‑CAA‑AATATTTGGTAATATTCTAAAATATTTTGCAGGAGGTGACAAAATA‑TGTTG‑CCCAAGTGCCCGGTCTGTGGAAAAGAAATGATAGTTACAGAGCTTCACTGCAAAAGAGATGAGGTCACCGTGCGAGGACGTTTCAGAGCGAGt                                                             <  1:932105/240‑1 (MQ=255)
                                                                                                                                                                                  aaTACTAATTATATGTAAAGAAAATCTCGTTTCACGGC‑GGG‑GAAAAGGGG‑AAA‑GAAAAAACTT‑AAAA‑AAAAAATTTTTTT‑GGG‑GCTTT‑T‑CAA‑AAAATTTTTTAATATTTTAAAAAATTTTTTAAGAGGGGAAAAAAAA‑TTTTGTCCCAAAGGCCC‑GTCTGTGGGAAAGAAATGAAAATTAAAAAAGTTTCCTGCAAAAAAAAAGAGGGGACAGAGGGAGGACGTTTCAGAGCGAgggcgt                                                         >  2:1162035/1‑235 (MQ=255)
                                                                                                                                                                                     aCTAATTATATGTAAAGAAAATCTCGTTTCACGGC‑GGG‑AAAAGGGGC‑AAC‑GAAAATCCTT‑ACAG‑AAAAATTTTTTTG‑GAG‑ACTTG‑A‑CAA‑AATATTTGGTAATATTCTAAAATATTTTGCAGGAGGTGACAAAATA‑TGTTG‑CCCaa                                                                                                                                                     <  1:1242060/145‑1 (MQ=255)
                                                                                                                                                                                       tAATTATATGTAAAGAAAATCTCGTTTCACGGC‑GGG‑AAAAGGGGC‑AAC‑GAAAATCCTT‑ACAG‑AAAAATTTTTTTG‑GAG‑ACTTG‑A‑CAA‑AATATTTGGTAATATTCTaa                                                                                                                                                                                           <  1:260560/107‑1 (MQ=255)
                                                                                                                                                                                        aaTTATATGTAAAGAAAATCTCGTTTCACGGC‑GGG‑AAAAGGAGCGAAC‑AAAAACACTT‑‑CAG‑AAAAATTTTTTTT‑GGG‑AGTTG‑A‑TAA‑AAAATTTTGTAATATTCTAAAATATTTTTTTCGAGGGGACAAAAAA‑TGTTT‑TCCAAGAGCCCCGGCTGTGGGAAAGGAAAAAAATATATAGAAGGTTACTGCCACAGAGATGGGGGCACCGCCGGAGGGCGGTTCAGAGCGAGGCCGttgcagt                                                   >  2:1253088/1‑235 (MQ=255)
                                                                                                                                                                                         aTTATATGTAAAGAAAATCTCGTTTCACGGC‑GGG‑AAAAGGGGC‑AAC‑GAAAATCCTT‑ACAG‑AAAAATTTTTTTG‑GAG‑ACTTG‑A‑CAA‑AATATTTGGTAATATTCTAAAATATTTTGCAGGAGGTg                                                                                                                                                                         <  2:1152307/123‑1 (MQ=255)
                                                                                                                                                                                             tatGTAAAGAAAATCTCGTTTCACGGC‑GGG‑AAAAAAGGC‑GAC‑GAAAATACTT‑ACAG‑AAAAATTTTTTTG‑GAG‑ACTTG‑A‑CAA‑AAAATTTGGTAATATTCTAAAATATTTTTTAGGAGGTGACAAAATA‑TGTTG‑CCCAAGTGCCCGGGCTGTGGAAAAGAAATGATAGGTTCAGAGCTTCACTTCAAAAGAGATGAGGTAACCGTGCGAGGAGGGTTCTGAGCGCGTCCCGTCGATTTtctc                                              >  1:769175/1‑240 (MQ=255)
                                                                                                                                                                                              atGTAAAGAAAATCTCGTTTCACGGC‑GGG‑AAAAAGGGG‑AAC‑GAAAATACTT‑ACAG‑AAAAAATTTTTTT‑GAG‑ACTTT‑A‑CAA‑AAAATTTGGTAATATTTTAAAAAATTTTTCAGGAGGTGACAAAATA‑TGTTG‑CCCAAATGCCCGGTCTGTGGAAAAAAAAAGATAGTTACAGAGCTTCAATGCGAAAGAGATGAGGGCACCGTGCGAGGGCGTTTCAGAGCGAGGCCGTTCGATTTtcttg                                             >  1:1461492/1‑238 (MQ=255)
                                                                                                                                                                                                gTAAAGAAAATCTCGTTTCACGGC‑GGG‑GAAAAGGGG‑AAA‑GAAAAAACTT‑ACAG‑AAAAATTTTTTTT‑GAG‑AATTG‑A‑CAA‑AATATTTTGGGAAATTTTAAAAAATTTTTTAGGAGGGGGCAAAAAA‑TATTT‑CCCAAATGCCCCGTCTGTTGGAAAAAAATGATAGTTTTAAAGCTTCACTGCAAAAGAGATGAGGGGACCGCGCGAGGAGGGTTCAGATGGAGAGCGTTGCGTTTTCTCGAt                                           >  2:1029008/1‑240 (MQ=255)
                                                                                                                                                                                                  aaaGAAAATCTCGTTTCACGGC‑GGG‑AAAAAAGGC‑CAC‑GAAAAACCTT‑AAAG‑AAAAAATTTTTTT‑GAG‑ACTTT‑A‑CAA‑AATAATTGGTAATAATCTAAAAAATTTTTCCGGAGGGGGAAAAATA‑TGTTG‑CCCAAGTGCCCCGGCTGTGGGAAAGAAATGATAGTTAAAGAGGTTCACTGCAAAAGAGATGAGGTCACCCCGCGAGGAAGTTTCAGAGCGAGGCCGGTTGATTTTTTCggtta                                         >  1:294949/1‑236 (MQ=255)
                                                                                                                                                                                                      aaaaTCTCGTTTCACGGC‑GGG‑AAAAGGGGC‑AAC‑GAAAATCCTT‑ACAG‑AAAAATTTTTTTG‑GAG‑ACTTG‑A‑CAA‑AATATTTGGTAATATTCTAAAATATTTTGCAGGAGGTGACAAAata‑t                                                                                                                                                               <  1:276812/119‑1 (MQ=255)
                                                                                                                                                                                                       aaaTCTCGTTTCACGGC‑GGG‑AAAAGGGGC‑AAC‑GAAAATCCTT‑ACAG‑AAAAATTTTTTTG‑GAG‑ACTTG‑A‑CAA‑AATATTTGGTAATATTCTAAAATATTTTGCAGGAGGTGACAAAATA‑TGTTG‑CCCAAGTGCCCGGTCTGTGGAAAAGAAATGATAGTTACAGAGCTTCACTGCAAAAGAGATGAGGTCACCGTGCGAGGACGTTTCAGAGCGAGTCCGTTCGATTTTCTCGATAAAGa                                      <  1:604604/238‑1 (MQ=255)
                                                                                                                                                                                                             cGTTTCACGGC‑GGG‑AAAAGGGGC‑AAC‑GAAAATCCTT‑ACAG‑AAAAATTTTTTTG‑GAG‑ACTTG‑A‑CAA‑AATATTTGGTAATATTCTAAAATATTTTGCAGGAGGTGACAAAATA‑TGTTG‑CCCAAGTGCCCGGTCTGTGGAAAAGAAATGATAGTTACAGAGCTTCACTGCAAAAGAGATGAGGTCACCGTGCGAGGACGTTTCAGAGCGAGTCCGTTCGATTTTCTCGATAAAGACGAGCTCg                              <  1:1162035/240‑1 (MQ=255)
                                                                                                                                                                                                             cGTTTCACGGC‑GGG‑AAAAGGGGC‑AAC‑GAAAATCCTT‑ACAG‑AAAAATTTTTTTG‑GAG‑ACTTG‑A‑CAA‑AATATTTGGTAATATTCTAAAATATTTTGCAGGAGGTGACAAAATA‑TGTTG‑CCCAAGTGCCCGGTCTGTGGAAAAGAAATGATAGTTACAGAGCTTCACTGCAAAAGAGATGAGGTCACCGTGCGAGGACGTTTCAGAGCGAGTCCGTTCGATTTTCTCGATAAAGACGAGCTCg                              <  1:971066/240‑1 (MQ=255)
                                                                                                                                                                                                               tttAACGGC‑GGG‑AAAAGGGGC‑AAC‑GAAAATCCTT‑ACAG‑AAAAATTTTTTTG‑GAG‑ACTTG‑A‑CAA‑AATATTTGGTAATATTCTAAAATATTTTGCAGGAGGTGACAAAATA‑TGTTG‑CCCAAGTGCCCGGTCTGTGGAAAAGAAATGATAGTTACAGAGCTTCACTGCAAAAGAGATGAGGTCACCGTGCGAGGACGTTTCAGAGCGAGTCCGTTCGATTTTCTCGATAAAGACGAGCTCGAg                            <  2:271054/240‑1 (MQ=255)
                                                                                                                                                                                                                ttCACGGC‑GGG‑AAAAGGGGC‑AAC‑GAAAATCCTT‑ACAG‑AAAAATTTTTTTG‑GAG‑ACTTG‑A‑CAA‑AATATTTGGTAATATTCTAAAATATTTTGCAGGAGGTGACAAAATA‑TGTTG‑CCCAAGTGCCCGGTCTGTGGAAAAGAAATGATAGTTACAGAGCTTCACTGCAAAAGAGATGAGGTCACCGTGCGAGGACGTTTCAGAGCGAGTCCGTTCGATTTTCTCGATAAAGACGAGCTCGAg                            <  1:186518/239‑1 (MQ=255)
                                                                                                                                                                                                                         ggg‑AAAAGGGGC‑AAC‑GAAAATCCTT‑ACAG‑AAAAATTTTTTTG‑GAG‑ACTTG‑A‑CAA‑AATATTTGGTAATATTCTAAAATATTTTGCAGGAGGTGACAAAATA‑TGTTG‑CCCAAGTGCCCGGTCTGTGGAAAAGAAATGATAGTTACAGAGCTTCACTGCAAAAGAGATGAGGTCACCGTGCGAGGACGTTTCAGAGCGAGTCCGTTCGATTTTCTCGATAAAGACGAGCTCGAGTTCGTGAt                    <  1:126185/239‑1 (MQ=255)
                                                                                                                                                                                                                         ggg‑AAAAGGGGC‑AAC‑GAAAATCCTT‑ACAG‑AAAAATTTTTTTG‑GAG‑ACATG‑A‑CAA‑AATATTTGGTAATATTCTAAAATATTTTGCAGGAGGTGCCAAAATA‑TGTTG‑CCCAAGTGCCCGGTCTGTGGAAAAGAAATGATAGTTACAGAGCTTCACTGCAAAAGAGATGAGGTCACCGTGCGAGGACGTTTCAGAGCGAGTCCGTTCGATTTTCTCGATAAAGACGAGCTCGAGTTCGTGAt                    <  1:1287676/239‑1 (MQ=255)
                                                                                                                                                                                                                           g‑AAAAGGGGC‑AAC‑GAAAATCCTT‑ACAG‑AAAAATTTTTTTG‑GAG‑ACTTG‑A‑CAA‑AATATTTGGTAATATTCTAAAATATTTTGCAGGAGGTGACAAAATA‑TGTTG‑CCCAAGTGCCCGGTCTGTGGAAAAGAAATGATAGTTACAGAGCTTCACTGCAAAAGAGATGAGGTCACCGTGCGAGGACGTTTCAGAGCGAGTCCGTTCGATTTTCTCGATAAAGACGAGCTCGAGTTCGTGATTc                  <  1:215654/239‑1 (MQ=255)
                                                                                                                                                                                                                                  gggC‑AAC‑GAAAATCCTT‑ACAG‑AAAAATTTTTTTG‑GAG‑ACTTG‑A‑CAA‑AATATTTGGTAATATTCTAAAATATTTTGCAGGAGGTGACAAAATA‑TGTTG‑CCCAAGTGCCCGGTCTGTGGAAAAGAAATGATAGTTACAGAGCTTCACTGCAAAAGAGATGAGGTCACCGTGCGAGGACGTTTCAGAGCGAGTCCGTTCGATTTTCTCGATAAAGACGAGCTCGAGTTCGTGATTCTAttttt           >  1:66440/1‑240 (MQ=255)
                                                                                                                                                                                                                                    gC‑AAC‑GAAAATCCTT‑ACAG‑AAAAATTTTTTTG‑GAG‑ACTTG‑A‑CAA‑AATATTTGGTAATATTCTAAAATATTTTGCAGGAGGTGACAAAATA‑TGTTG‑CCCAAGTGCCCGGTCTGTGGAAAAGAAATGATAGTTACAGAGCTTCACTGCAAAAGAGATGAGGTCACCGTGCGAGGACGTTTCAGAGCGAGTCCGTTCGATTTTCTCGATAAAGACGAGCTCGAGTTCGTGATTCTATTTTTc          <  2:729449/239‑1 (MQ=255)
                                                                                                                                                                                                                                    gC‑AAC‑GAAAATCCTT‑ACAG‑AAAAATTTTTTTG‑GAG‑ACTTG‑A‑CAA‑AATATTTGGTAATATTCTAAAATATTTTGCAGGAGGTGACAAAATA‑TGTTG‑CCCAAGTGCCCGGTCTGTGGAAAAGAAATGATAGTTACAGAGCTTCACTGCAAAAGAGATGAGGTCACCGTGCGAGGACGTTTCAGAGCGAGTCCGTTCGATTTTCTCGATAAAGACGAGCTCGAGTTCGTGATTCTATTTTTCa         >  1:1028088/1‑240 (MQ=255)
                                                                                                                                                                                                                                       aaC‑GATAATCCTT‑TCAG‑AAAAATTTTTTTG‑GAG‑ACTTG‑A‑CAA‑AATATTTGGTAATATTCTAAAATATGTTGCAGGAGGTGACAAAAGA‑GGTTG‑CCCAAGTGCCCGGTCTGTGGAAAAGAAATGATAGTTACAGAGCTTCACTGCAAAAGAGATGAGGTCACCGTGCGAGGACGTTTCAGAGCGAGTCCGTTCGATTTTCTCGATAAAGACGAGCTCGAGTTCGTGATTCTATTTTTCaga       <  2:1381412/240‑1 (MQ=255)
                                                                                                                                                                                                                                       aaC‑GAAAATCCTT‑ACAG‑AAAAATTTTTTTG‑GAG‑ACTTG‑A‑CAA‑AATATTTGGTAATATTCTAAAATATTTTGCAGGAGGTGACAAAATA‑TGTTG‑CCCAAGTGCCCGGTCTGTGGAAAAGAAATGATAGTTACAGAGCTTCACTGCAAAag                                                                                                  >  1:465842/1‑149 (MQ=255)
                                                                                                                                                                                                                                           gAAAATCCTT‑ACAG‑AAAAATTTTTTTG‑GAG‑ACTTG‑A‑CAA‑AATATTTGGTAATATTCTAAAATATTTTGCAGGAGGTGACAAAATA‑TGTTG‑CCCAAGTGCCCGGTCTGTGGAAAAGAAATGATAGTTACAGAGCTTCACTGCAAAAGAGATGAGGTCACCGTGCGAGGACGTTTCAGAGCGAGTCCGTTCGATTTTCTCGATAAAGACGAGCTCGAGTTCGTGATTCTATTTTTCAGAgcg    <  1:335001/240‑1 (MQ=255)
                                                                                                                                                                                                                                             aaaTCCTT‑ACAG‑AAAAATTTTTTTG‑GAG‑ACTTG‑A‑CAA‑AATATTTGGTAATATTCTAAAATATTTTGCAGGAGGTGACAAAATA‑TGTTG‑CCCAAGTGCCCGGTCTGTGGAAAAGAAATGATAGTTACAGAGCTTCACTGCAAAAGAGATGGGGTCACCGTGCGAGGACGTTTCAGAGCGAGTCCGTTCGATTTTCTCGATAAAGACGAGCTGGGGTTCGGGATTCAATTTTTCAGAGggcg  >  2:521812/1‑240 (MQ=255)
                                                                                                                                                                                                                                             aaaTCCTT‑ACAG‑AAAAATTTTTTTG‑GAG‑ACTTG‑A‑CAA‑AATATTTGGTAATATTCTAAAATATTTTGCAGGAGGTGACAAAATA‑TGTTG‑CCCAAGTGCCCGGTCTGTGGAAAAGAAATGATAGTTACAGAGCTTCACTGCAAAAGAGATGAGGTCACCGTGCGAGGACGTTTCAGAGCGAGTCCGTTCGATTTTCTCGATAAAGACGAGCTCGAGTTCGTGATTCTATTTTTCAGAgcg    <  2:181545/238‑1 (MQ=255)
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AAGCACAAAATAAGAATTAATAATTATCTGTTCCTTTTCTGTCCTATCTTCTCGCTGTGAATGGCTATCAACACATCTACCGGTATCAACACAAACATTTTCCTCACCTCCTTTTTGAGAATAATTCTCATCTTTCACATAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGGC‑GGG‑AAAAGGGGC‑AAC‑GAAAATCCTT‑ACAG‑AAAAATTTTTTTG‑GAG‑ACTTG‑A‑CAA‑AATATTTGGTAATATTCTAAAATATTTTGCAGGAGGTGACAAAATA‑TGTTG‑CCCAAGTGCCCGGTCTGTGGAAAAGAAATGATAGTTACAGAGCTTCACTGCAAAAGAGATGAGGTCACCGTGCGAGGACGTTTCAGAGCGAGTCCGTTCGATTTTCTCGATAAAGACGAGCTCGAGTTCGTGATTCTATTTTTCAGAGCGCG  >  NC_021214/358288‑358760

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑